Summary: Glutathione S-transferase, C-terminal domain
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Glutathione S-transferase, C-terminal domain Edit Wikipedia article
|Glutathione S-transferase, C-terminal domain|
GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants.
The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.
Biological function and classification
In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophilic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST.
Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol.
Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.
Human proteins containing this domain
- Armstrong RN (1997). "Structure, Catalytic Mechanism, and Evolution of the Glutathione Transferases". Chemical Research in Toxicology 10 (1): 2–18. doi:10.1021/tx960072x. PMID 9074797.
- Board PG, Coggan M, Chelvanayagam G, Easteal S, Jermiin LS, Schulte GK, Danley DE, Hoth LR, Griffor MC, Kamath AV, Rosner MH, Chrunyk BA, Perregaux DE, Gabel CA, Geoghegan KF, Pandit J (2000). "Identification, Characterization, and Crystal Structure of the Omega Class Glutathione Transferases". Journal of Biological Chemistry 275 (32): 24798–24806. doi:10.1074/jbc.M001706200. PMID 10783391.
- Dulhunty A, Gage P, Curtis S, Chelvanayagam G, Board P (2000). "The Glutathione Transferase Structural Family Includes a Nuclear Chloride Channel and a Ryanodine Receptor Calcium Release Channel Modulator". Journal of Biological Chemistry 276 (5): 3319–3323. doi:10.1074/jbc.M007874200. PMID 11035031.
- Eaton DL, Bammler TK (1999). "Concise review of the glutathione S-transferases and their significance to toxicology". Toxicological sciences : an official journal of the Society of Toxicology 49 (2): 156–164. PMID 10416260.
- Polekhina G, Board PG, Blackburn AC, Parker MW (2001). "Crystal structure of maleylacetoacetate isomerase/glutathione transferase zeta reveals the molecular basis for its remarkable catalytic promiscuity". Biochemistry 40 (6): 1567–1576. doi:10.1021/bi002249z. PMID 11327815.
- Vuilleumier S (1997). "Bacterial glutathione S-transferases: What are they good for?". Journal of bacteriology 179 (5): 1431–1441. PMC 178850. PMID 9045797.
- Nishida M, Harada S, Noguchi S, Satow Y, Inoue H, Takahashi K (1998). "Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: Catalytic roles of Cys10 and His106". Journal of Molecular Biology 281 (1): 135–147. doi:10.1006/jmbi.1998.1927. PMID 9680481.
- Dixon DP, Lapthorn A, Edwards R (2002). "Plant glutathione transferases". Genome biology 3 (3): REVIEWS3004. PMC 139027. PMID 11897031.
- , GST Gene Fusion System Handbook by GE Healthcare Life Sciences
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Glutathione S-transferase, C-terminal domain Provide feedback
GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain .
Nishida M, Harada S, Noguchi S, Satow Y, Inoue H, Takahashi K; , J Mol Biol 1998;281:135-147.: Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106. PUBMED:9680481 EPMC:9680481
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This tab holds annotation information from the InterPro database.
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Curation and family details
This family is new in this Pfam release.
|Number in seed:||7|
|Number in full:||561|
|Average length of the domain:||116.50 aa|
|Average identity of full alignment:||75 %|
|Average coverage of the sequence by the domain:||54.87 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||1|
|Download:||download the raw HMM for this family|
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For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the GST_C_4 domain has been found. There are 1 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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