# STOCKHOLM 1.0
#=GF ID HMG_box_5
#=GF AC PF14887.7
#=GF DE HMG (high mobility group) box 5
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF GA 25.0 25.0
#=GF NC 24.9 24.9
#=GF TC 25.0 25.0
#=GF SE CATH:1l8y_A_00
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 12590579
#=GF RT Solution structure and DNA binding property of the fifth HMG box
#=GF RT domain in comparison with the first HMG box domain in human
#=GF RT upstream binding factor.
#=GF RA Yang W, Xu Y, Wu J, Zeng W, Shi Y;
#=GF RL Biochemistry. 2003;42:1930-1938.
#=GF DR INTERPRO; IPR029215;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC Nucleolar transcription factor/upstream binding factor contains
#=GF CC six HMG box domains. This is the fifth HMG box domain in these
#=GF CC proteins. This domain has lost DNA-binding ability [1].
#=GF SQ 17
P17480.1/479-563     GKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALK.AMEMTWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPAATNSSKKMKF
P25977.1/479-563     GKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALK.AMEMTWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPAATNSSKKMKF
P25976.1/479-563     GKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALK.AMEMTWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPAATNSSKKMKF
A0A3M0J1G0.1/479-563 GKLPESPKTAEEIWQQSVIGDYLARFKNDRSKALK.AMEATWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPCSTNSTKKMKF
A0A3Q2U943.1/479-563 GKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALK.AMEATWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPCSTNSAKKVKF
A0A1D5P0C5.2/465-549 GKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALK.AMEATWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPCSTNSAKKVKF
M7C032.1/459-543     AKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALK.AMEATWNNMEKKEKLMWIKKAAEDQKRFE......RELSEMRAPPCSANSSKKMKF
A0A3Q2UAH3.1/442-526 GKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALK.AMEATWNNMEKKEKLMWIKKAAEDQKRYE......RELSEMRAPPCSTNSAKKVKF
F1QZ83.1/469-553     GKLPETPKTAQEIWQQSVIGDYLARFKNDRAKAQK.TMEATWNTMEKKEKIVWIKKAAEDQKRYE......RELSEMRSPAPVITPGKKMKF
A0A401NVS9.1/488-568 GKLPEPPKTAEEIWQQNVIGDYLAKYRNDRSKAFR.AMEATWSAMEKKEKLMWIKKAAEDQKRYE......KELSEIRTPAT----NKKMKF
B0S7C2.1/196-278     -DLPEKPKTPQQLWYNHEKKTYMKIHPEVSQKELKeALRRQWSQLSDKKRLKWISKALELQKHYE......DTMRAYIEAHPDANSDEHV--
B0S7C2.1/433-505     -RLPETPKTPEEMWQQSVIGDYLAKYRSDRKKAQN.AMDAAWKAMEKKEKIPWIKKAAEDQKRYE......RELLEMRTVL-----------
B0S7C3.1/196-278     -DLPEKPKTPQQLWYNHEKKTYMKIHPEVSQKELKeALRRQWSQLSDKKRLKWISKALELQKHYE......DTMRAYIEAHPDANSDEHV--
B0S7C3.1/433-510     -RLPETPKTPEEMWQQSVIGDYLAKYRSDRKKAQN.AMDAAWKAMEKKEKIPWIKKAAEDQKRYEvqyrtvRELLEMRTV------------
S4RXC0.1/476-558     -KTPETPKTAEEIFQQTKLVECLVKYKNDKKKALK.ALDAEWKGLDKKQKIFWIKAAAEDQKRYE......RELTTLRTTAAPP-HNKKVKF
F1R7C9.1/2-29        -----------------------------------.-----------KEKIPWIKKAAEDQKRYE......RELLEMRTVL-----------
A0A087TKE7.1/292-339 -------------------------CQMDRREAME.KLRKMWSNLSDNKKVKWIRKAVQDEQRYG......MEVEKYRSE------------
//