# STOCKHOLM 1.0
#=GF ID   CCDC144C
#=GF AC   PF14915.1
#=GF DE   CCDC144C protein coiled-coil region
#=GF AU   Coggill P, Hetherington K
#=GF SE   Jackhmmer:Q96IX9
#=GF GA   27.00 27.00;
#=GF TC   27.00 28.80;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF CC   This family includes the human protein CCDC144C and the ankyrin
#=GF CC   repeat domain-containing protein 26-like 1 found in eukaryotes.
#=GF CC   Its function remains unknown, however, it is known to contain a
#=GF CC   coiled-coil domain which corresponds to this region. The ankyrin
#=GF CC   repeat which features in this protein is a common amino acid
#=GF CC   motif.
#=GF SQ   17
#=GS AN20B_HUMAN/514-807    AC Q5CZ79.2
#=GS AN18A_HUMAN/327-618    AC Q8IVF6.3
#=GS ANR62_HUMAN/561-854    AC A6NC57.4
#=GS AN30B_HUMAN/1084-1373  AC Q9BXX2.3
#=GS C144C_HUMAN/634-934    AC Q8IYA2.3
#=GS A1L497_HUMAN/930-1234  AC A1L497.1
#=GS E2RQU1_CANFA/129-433   AC E2RQU1.1
#=GS E2RN06_CANFA/24-306    AC E2RN06.1
#=GS F1PYJ5_CANFA/97-400    AC F1PYJ5.1
#=GS F1MNX4_BOVIN/478-772   AC F1MNX4.2
#=GS F1SBM9_PIG/872-1177    AC F1SBM9.1
#=GS F1SER7_PIG/454-755     AC F1SER7.1
#=GS F1RVJ9_PIG/411-715     AC F1RVJ9.1
#=GS D3Z482_MOUSE/886-1190  AC D3Z482.1
#=GS E1BZ82_CHICK/327-631   AC E1BZ82.1
#=GS F1R4I5_DANRE/493-797   AC F1R4I5.1
#=GS Q4SLR5_TETNG/102-406   AC Q4SLR5.1
AN20B_HUMAN/514-807               NCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYIKLNEEMITETAFRYQQELNDLKAENTRLNAELLKEKESKKRLEADIESYQSRLAAAIGKHSESVKTERNVKLALERTQD..VSVQVEMSSAISKVKDENEFLTEQLSETQIKFNALKDKFRKTRDSLRKKSLALE..TVQNDLRKTQQQTQEMKEMYQNAEAKVNNSTG.KWNCVEERICHLQRENAWLVQQLDDVHQKEDHKE.IVTNIQRGF........IESGKKDLVLEEKSKKLMNECDHLKESLFQYEREKAEGV
AN18A_HUMAN/327-618               NFMLKKDIAMLKEELYAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDLKAENARLNSELEKEKHNKERLEAEVESLHSSLATAINEYNE.IVERKDLELVLWRADD..VSRHEKMGSNISQLTDKNELLTEQVHKARVKFNTLKGKLRETRDALREKTLALG..SVQLDLRQAQHRIKEMKQMHPNGEAKESQSIG.KQNSLEERIRQQELENLLLERQLEDARKEGDNKE.IVINIHRDC........LENGKEDL.LEERNKELMKEYNYLKEKLLQCEKEKAERE
ANR62_HUMAN/561-854               NHLMRDEIARLRLEIDTIKHQNQETENKYFKDIEIIKENNEDLEKTLKRNEEALTKTITRYSKELNVLMDENTMLNSELQKEKQSMSRLETEMESYRCRLAAALCDHDQRQSSKRDLQLAFQSTVNEWCHLQEDTNSHI.......QILSQQLSKAESTSSGLETELHYEREALKEKTLHIE..HMQGVLSRTQRRLEDIEHMYQNDQPILEKYVR.KQQSVEDGLFQLQSQNLLYQQQCNDARKKADNQEKTIINIQVKCEDTVEKLQAECRK....LEENNKGLMKECTLLKERQCQYEKEKEERE
AN30B_HUMAN/1084-1373             NCMLKKEIAMLKLEVATLKHQHQVKENKYFEDIKILQEKNAELQMTLKLKQKTVTKRASQYREQLKVLTAENTMLTSKL.KEKQDKEILETEIESHHPRLASALQDHDQSVTSRKNQELAFHSAGD..APLQGIMNVDVSNTIYNNEVLHQPLYEAQRKSKSPKINLNYAGDDLRENALVSE..HAQRDRCETQCQMKKAEHMYQNEQDNVDKHTE.QQESLEQKLFQLESKNRWLRQQLVYAHKKVN.KSKVTINIQ...........FPEMKMQRHLNEKNEEVFNYGNHLKERIDQYEKEKAERE
C144C_HUMAN/634-934               NCMLQEEIALLRLEIDTIKNQNKQKEKKYFEDIEVVKEKNDNLQKIIKRNEETLTETILQYSGQLNNLTAENKMLNSELENGKENQERLEIEMESYRCRLAAAVHDCDQSQTA.RDLKLDFQRTRQEWVRLHDKMKVDMSGLQAKNEILSEKLSNAESKINSLQIQLHNTRDALGRESLILE..RVQRDLSQTQCQKKETEQMYQS...KLKKYIA.KQESVEERLSQLQSENMLLRQQLDDVHKKANSQEKTISTIQDQFHSAAKNLQAESEKQILSLQEKNKELMDEYNHLKERMDQCEKEKAGRK
A1L497_HUMAN/930-1234             NSMLQEEIAMLRLEIDTIKNQNQEKEKKCFEDLKIVKEKNEDLQKTIKQNEETLTQTISQYNGRLSVLTAENAMLNSKLENEKQSKERLEAEVESYHSRLAAAIHDRDQSETSKRELELAFQRARDECSRLQDKMNFDVSNLKDNNEILSQQLFKTESKLNSLEIEFHHTRDALREKTLGLE..RVQKDLSQTQCQMKEMEQKYQNEQVKVNKYIG.KQESVEERLSQLQSENMLLRQQLDDAHNKADNKEKTVINIQDQFHAIVQKLQAESEKQSLLLEERNKELISECNHLKERQYQYENEKAERE
E2RQU1_CANFA/129-433              NRMLQDEIAMLRLEIDTIRNQNQEKEKKYCEDIEIEKEKNDSLQKTIKLNEVTLTNTVFQYTGQLNVLTTENTMLHSQLDNEKQNKERLEAKIQSYRARLATAIQDHDQSQASKRDLELAFQRAKDEWFRLQDKMNFDVSNLKDNNEVLSQQLSKAESKFNTLEIELHHTRDALREKTLALE..HVQRNLKQTQCQKKEIEQKYQNEQSKVNKYFG.KQGSLEERLSQLQSENMLLRQQIDDAYSKVDCKEKTVIDIQDQFQVIVRNLQAESEKQSVILQERNKELITECNHLKERIYKYEKEKEERE
E2RN06_CANFA/24-306               NRMLQDELAMLRLEIDTIRNQKQEK..RYCEDTETEKEKNDSLQNAIKLN....................ENTMLNSKLQDEKLNRERLEAKLQSYRARLATAIQDRDQSQASKRDLELAFQRAKDEWCHLQDKMNFEMSNLKDNNEVLSQQLSEVESKFNALEIELQHTRDALREKTLALE..HLQRNPKQTQGQKKEIEQKSQNEHGKVNKYIG.KHESLEEKLSQLQSENMLLREQLDDAYSRVECKEKTIIDLKDQVQVIVRMVRVAGEKRNLLLREKNKELINKCKQIMERAFRYEDEKEERE
F1PYJ5_CANFA/97-400               NRRLQDEIATLRLEIDTIRNQKQEKEKKYCEDTEIEKEKNDSLQIVIKLNGVTLTNTVFQSSGQLNVVTTENTMLNSKLQNEKLNRERPEAKLQSYRARLTTAVQDHDQSQASKRDLELAFQRTKDEWCHLQGKMNFEMSNLKDNNEVLSQQFSEAKSKFNTLEIELQYKRDALREKTLALE..HVQRNLKQTQDQKMEIEQKSQNEQDKVNKYMG.KHESLEERLSQPQSENTLLREQLDDGYSRVECKEKTRIDLEDQVHVTVRNLQAELENQGL.IQQGDTEFIDEWEHLIERRYTYKKEKEGRE
F1MNX4_BOVIN/478-772              KHMLQEEIAMLRLEIDALKNQHREKEENYFEDIEILKVKNDDLQKAIKLNEETLTKTISHYTGQLNALTAENTMINSKLENKKESK.KTGTEVKSYCSRLAAALHD.....TSKRDLELAFQRARDEWLCLQDKMKYDVANLKDNSEMLSQQLSTVESIFNKLKIKLHHTRDDLREKTLMLE..RVQRDLSQSECQKQEIEHIIRMNKANLG.....KQESLEERLSQLQSENMLLRQQLGNAQNRANSKVKTVISIQDQFQQIVRKLQAKYEKQGLLLEKRNNELIKEYNHLKERMYWYENEKAEGK
F1SBM9_PIG/872-1177               NHMSQNEIAMLKQKIEVIKNHSQEMGKKCFRDIKIAKKKFAKLQERVKL.EDILTKTILECSRRLNVLTAENTRLKSELDNERQNKERPERQVESFHSGLAAATHDQEQSQTSERDLELAFQRAEDKCFPFQDEINLDVSNLKD.SKMHSQQLSTTEGKSSSLETELHHRRDALGEKSLVFEPVPVQRDLSQAQCQKKEIAHMPPSEQGKVKKYMGEQQESLKERSSQLESENLLLRQQLDDLQKEVDSKEKMVNNLQDQCLDSIKKLQAESEKPHLMLKERNKELPEECSHLKERRNQYENEKTERE
F1SER7_PIG/454-755                NLMIQDEIATLKREIDTIKNENQEKEKKYLEDIEIVKQKNDELQKAIKLNEEKLTQT...YSGQLHDLTAENTRLKSKLKKEEQKKESLETDVELYCSKLTTAMSDHEQSQTAKRDLELTFQRARGEWLCLQDKMNLEMSNLKDHNKLLLQQLSETQRKFSSLDIEMHHTRDALRENSLLLE..QVQRELSQAQCQKKESEDPCLCEHGKLKEYMG.KQERLEERLAQLESVNLLLQEQLDDAKNKIESKEKMVMDSQERFQDILKTFQDQREKESLMLEESLKKLTNELHLLKERLSQAENVKTQRA
F1RVJ9_PIG/411-715                NHMLQDEIALLKLEIDTIKKQNQEKENKYFEDIEIVKEKNDDLQKTIKLNEETLAKTILQYSGQLNVLTAENTMLKSKLESEKQNKDRLEAEVESYHSRLAAAIQDREQSQTSKRDLELAFQRAKDEWLRLQDKMNFDVANLKDNNEMLSQQLSKTESKFNSLETELHHTKDALREKALVLE..RVQRDLSQAQGQKKEIEHMYQSEQGKVNKYMG.KQESLEERLSQLQSENLLLRQQLDDAQNKVDSKEKTVINIQGQFQDIVKRLQAESERQGLMLEERNKELTNECNHLKERLYQYENEKAERE
D3Z482_MOUSE/886-1190             NQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALK..HAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMG.KQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAERE
E1BZ82_CHICK/327-631              NQLLQEEIAMLRLELDQVKLRHQENEGKYLEENESLKEKNDDLQKELKLNEEALTQTVLQYNGQLNLLKTESAMLTSKLEQTKESKDRLETEIESFRSRLNAAVQDLERHQSLKSDVERTFQRERDEWLRLQDKLHCELSDVRETNKSLSQQLSKMESKANSLENELHQFKQTLREKTLLLE..MTQKDLNQAQCQAKESDHARQLEKDQVSKFMI.KQESMQERLAQLQSENLLLRQQLEDMQNKGIIKEKVVNDVQDKFNDIFNKLRADTEKQVYLMEERNKELNTKCTDLREQVFKYETDKVERE
F1R4I5_DANRE/493-797              NRTLQDELSGARAELERLQCQSRQDESRLAEDRDTLRERLEDARRDMKLSEEALAQTVFQYNGQLSALKAECSVLSAKLEHERQTRQQLEAEAEAGRARLQAAIQEAERCQASRTEAERSLQRDREEHQRMQEKHIFESGTQRDTIQSLSQKLSKSEARANSFENECHRNALTLAEKAVLLE..TLAREKDQALSKLKELEATVLNERDQTSRAGA.KHEAMQERLAQAQSEAALLRQQLEEALNKGSAKDKAVTDVHQNFAEMLNQLRADGEERVHLVEERSRELAKSNSEIREQNYKLEQEKADRE
Q4SLR5_TETNG/102-406              IATLQEQLTTSKRDLEHSCANSSLRECTLSEENRVLKDQLEDARRDLKLNSESLKNTVFNSNNEVSSLKSELSETRTRLENERYTCERLETELESIRTRLSGAEKEAERSHVAKSERESTLLREKEEHQHLKGKLTGEVAILREENSTLSQKLIKAEAQANNLENEAHRVTQQLKDKGLLQE..VLQREKEQAVTRGLELEKTLHAEREQFSRDRA.RHEATQERLTQAQSEVMLLRQQLEEAQNKGLAKERAVTDAQGHLKDILSKLQSDYEERVQLVKERNKELDSKANDLQDHIHKLQDEKNEIK
#=GC seq_cons                     NphLQ-EIAhLRLEIDTIKspsQEKEpKYhEDIcIlKEKN-sLQ+slKLNEEsLTpTlhpYssQLNsLpAENTMLsS+L-pEKpsKERLEs-lESa+uRLAuAlpDp-pSQsoKRDLELAFQRs+DEah+LQ-KMsh-lSsL+DpNEhLSQQLScsEuKhNoLEhELH+sRDuLREKoLhLE..plQR-LsQsQsQtKEhEphhQsEpsKlsKahu.KQESlEERLuQLQSENhLLRQQL-DApsKs-sKEKsVhslQcphpshlppLQA-sEKpsLhLcE+NKELhsEssaLKERhhpYEpEKsERE
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