Summary: Pollen proteins Ole e I like
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Pollen proteins Ole e I like Provide feedback
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Internal database links
|SCOOP:||Transthyretin DUF1416 DUF2012|
|Similarity to PfamA using HHSearch:||CarboxypepD_reg|
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR006041
Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation.
The allergens in this family include allergens with the following designations: Ole e 1.
A number of plant pollen proteins, whose biological function is not yet known, are structurally related [PUBMED:8404906]. These proteins are most probably secreted and consist of about 145 residues. There are six cysteines which are conserved in the sequence of these proteins. They seem to be involved in disulphide bonds.
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This example describes an architecture with one
Gladomain, followed by two consecutive
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1Cannot generate PP/Heatmap alignments for seeds; no PP data available
Key: available, not generated, — not available.
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Curation and family details
|Author:||Finn RD, Bateman A|
|Number in seed:||91|
|Number in full:||693|
|Average length of the domain:||93.10 aa|
|Average identity of full alignment:||23 %|
|Average coverage of the sequence by the domain:||40.42 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||12|
|Download:||download the raw HMM for this family|
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