Summary: Scavenger receptor cysteine-rich domain
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Scavenger receptor cysteine-rich domain Provide feedback
SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.
Yamaguchi N, Okui A, Yamada T, Nakazato H, Mitsui S;, J Biol Chem. 2002;277:6806-6812.: Spinesin/TMPRSS5, a novel transmembrane serine protease, cloned from human spinal cord. PUBMED:11741986 EPMC:11741986
Internal database links
|Similarity to PfamA using HHSearch:||SRCR Hepsin-SRCR|
External database links
This tab holds annotation information from the InterPro database.
No InterPro data for this Pfam family.
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This example describes an architecture with one
Gladomain, followed by two consecutive
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Curation and family details
This family is new in this Pfam release.
|Seed source:||Rawlings ND|
|Number in seed:||47|
|Number in full:||411|
|Average length of the domain:||92.80 aa|
|Average identity of full alignment:||28 %|
|Average coverage of the sequence by the domain:||15.67 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||1|
|Download:||download the raw HMM for this family|
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