Summary: Enterobacterial TraT complement resistance protein
Enterobacterial TraT complement resistance protein Provide feedback
The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings [1,2].
Jalajakumari MB, Guidolin A, Buhk HJ, Manning PA, Ham LM, Hodgson AL, Cheah KC, Skurray RA; , J Mol Biol 1987;198:1-11.: Surface exclusion genes traS and traT of the F sex factor of Escherichia coli K-12. Determination of the nucleotide sequence and promoter and terminator activities. PUBMED:3323526 EPMC:3323526
Internal database links
|SCOOP:||DUF2076 Bacteriocin_IIc DUF2547 DUF3153 DUF3482 Gly-zipper_OmpA Gly-zipper_YMGG Gly-zipper_Omp|
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR008874
The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between Escherichia coli and its surroundings [PUBMED:9933744]. The protein plays a role in preventing unproductive conjugation between bacteria carrying like plasmids.
The mapping between Pfam and Gene Ontology is provided by InterPro. If you use this data please cite InterPro.
|Cellular component||outer membrane (GO:0019867)|
|Biological process||regulation of conjugation (GO:0046999)|
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Curation and family details
|Seed source:||Pfam-B_7686 (release 8.0)|
|Number in seed:||28|
|Number in full:||2079|
|Average length of the domain:||186.80 aa|
|Average identity of full alignment:||77 %|
|Average coverage of the sequence by the domain:||88.23 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||8|
|Download:||download the raw HMM for this family|
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