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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
C-C_Bond_Lyase PF15617 Family 68 137 318.70 38 89.77 Changed C-C_Bond_Lyase of the TIM-Barrel fold
c-SKI_SMAD_bind PF08782 Domain 44 380 91.70 47 14.24 Changed c-SKI Smad4 binding domain
C1-set PF07654 Domain 72 5015 84.20 24 34.17 Changed Immunoglobulin C1-set domain
C1-set_C PF16196 Family 31 281 50.50 47 20.34 Changed C1-set C-terminal domain
C1q PF00386 Domain 32 2686 123.60 28 33.77 Changed C1q domain
C1_1 PF00130 Domain 44 7092 52.60 30 7.93 Changed Phorbol esters/diacylglycerol binding domain (C1 domain)
C1_2 PF03107 Domain 220 2554 48.70 29 29.42 Changed C1 domain
C1_3 PF07649 Domain 159 311 29.60 42 6.07 Changed C1-like domain
C1_4 PF07975 Domain 11 323 54.90 43 12.12 Changed TFIIH C1-like domain
C2 PF00168 Domain 261 30945 106.10 18 20.76 Changed C2 domain
C2-C2_1 PF11618 Domain 50 198 140.80 39 12.18 Changed First C2 domain of RPGR-interacting protein 1
C2-set PF05790 Domain 27 214 81.10 26 25.44 Changed Immunoglobulin C2-set domain
C2-set_2 PF08205 Domain 28 3714 86.30 17 19.02 Changed CD80-like C2-set immunoglobulin domain
C4 PF01413 Domain 164 1235 106.50 47 14.48 Changed C-terminal tandem repeated domain in type 4 procollagen
C5-epim_C PF06662 Family 16 178 182.30 45 34.95 Changed D-glucuronyl C5-epimerase C-terminus
C6 PF01681 Family 114 242 93.10 20 50.93 Changed C6 domain
C6_DPF PF10170 Domain 35 103 89.10 45 55.18 Changed Cysteine-rich domain
C8 PF08742 Domain 946 3474 67.70 31 10.01 Changed C8 domain
C9orf72-like PF15019 Family 24 119 230.10 42 49.02 Changed C9orf72-like protein family
Caa3_CtaG PF09678 Family 281 499 235.80 24 58.40 Changed Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CAAD PF14159 Domain 124 374 81.80 36 35.01 Changed CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
CAAP1 PF15335 Family 30 116 61.20 48 16.17 Changed Caspase activity and apoptosis inhibitor 1
CaATP_NAI PF12515 Family 35 301 44.30 52 4.64 Changed Ca2+-ATPase N terminal autoinhibitory domain
CAAX_1 PF15895 Family 2 7 209.10 73 98.19 Changed CAAX box cerebral protein 1
CABIT PF12736 Domain 44 463 240.20 21 48.63 Changed Cell-cycle sustaining, positive selection,
CABS1 PF15367 Family 12 32 356.70 64 89.47 Changed Calcium-binding and spermatid-specific protein 1
CAC1F_C PF16885 Family 9 428 293.80 29 19.49 Changed Voltage-gated calcium channel subunit alpha, C-term
Cache_3-Cache_2 PF17201 Domain 36 128 236.70 20 35.93 New Cache 3/Cache 2 fusion domain
CactinC_cactus PF09732 Domain 54 392 124.80 66 21.14 Changed Cactus-binding C-terminus of cactin protein
Cactin_mid PF10312 Family 129 402 178.90 34 30.67 Changed Conserved mid region of cactin
Cad PF03596 Family 4 209 185.00 33 86.60 Changed Cadmium resistance transporter
Cadherin PF00028 Family 55 47291 93.20 25 45.87 Changed Cadherin domain
Cadherin-like PF12733 Domain 63 713 91.10 23 16.00 Changed Cadherin-like beta sandwich domain
Cadherin_2 PF08266 Domain 63 2364 82.60 36 9.19 Changed Cadherin-like
Cadherin_3 PF16184 Family 112 4976 132.10 21 46.55 Changed Cadherin-like
Cadherin_C PF01049 Family 119 1715 141.40 35 15.65 Changed Cadherin cytoplasmic region
Cadherin_C_2 PF16492 Family 146 1299 88.00 31 10.58 Changed Cadherin cytoplasmic C-terminal
Cadherin_pro PF08758 Domain 17 435 80.60 30 9.96 Changed Cadherin prodomain like
Cadherin_tail PF15974 Family 8 377 125.70 50 13.68 Changed Cadherin C-terminal cytoplasmic tail, catenin-binding region
Caenor_Her-1 PF09232 Domain 7 20 111.80 31 70.64 Changed Caenorhabditis elegans Her-1
Caerin_1 PF07440 Family 2 0 0.00 0 0.00 Changed Caerin 1 protein
CAF-1_p150 PF11600 Family 5 85 145.80 55 18.15 Changed Chromatin assembly factor 1 complex p150 subunit, N-terminal
CAF-1_p60_C PF15512 Domain 19 63 152.50 45 29.33 Changed Chromatin assembly factor complex 1 subunit p60, C-terminal
CAF1 PF04857 Family 164 1976 184.20 18 65.62 Changed CAF1 family ribonuclease
CAF1-p150_C2 PF15539 Domain 6 83 254.80 41 30.36 Changed CAF1 complex subunit p150, region binding to CAF1-p60 at C-term
CAF1-p150_N PF15557 Domain 8 61 208.90 39 23.58 Changed CAF1 complex subunit p150, region binding to PCNA
CAF1A PF12253 Family 160 416 75.90 38 10.40 Changed Chromatin assembly factor 1 subunit A
CAF1C_H4-bd PF12265 Family 268 1183 69.70 32 15.67 Changed Histone-binding protein RBBP4 or subunit C of CAF1 complex
CAF20 PF17052 Family 25 41 152.20 47 94.08 Changed Cap associated factor
Cag12 PF13117 Family 8 11 107.80 26 64.92 Changed Cag pathogenicity island protein Cag12
CagA PF03507 Family 1 1 190.00 100 16.02 Changed CagA exotoxin
CagD PF16567 Domain 1 1 205.00 100 99.03 Changed Pathogenicity island component CagD
CAGE1 PF15066 Family 14 68 332.70 44 60.98 Changed Cancer-associated gene protein 1 family
CagE_TrbE_VirB PF03135 Family 12 382 192.60 23 23.32 Changed CagE, TrbE, VirB family, component of type IV transporter system
CagS PF16707 Family 1 1 196.00 100 100.00 Changed Cag pathogenicity island protein S of Helicobacter pylori
CagX PF03524 Family 147 402 214.80 27 60.48 Changed Conjugal transfer protein
CagY_I PF14585 Repeat 2 3 65.00 89 10.12 Changed CagY type 1 repeat
CagY_M PF07337 Repeat 8 29 31.60 49 38.91 Changed DC-EC Repeat
CagZ PF09053 Domain 1 1 199.00 100 100.00 Changed CagZ
CaKB PF03185 Family 34 261 176.10 38 75.42 Changed Calcium-activated potassium channel, beta subunit
Calcipressin PF04847 Family 6 466 177.40 35 76.13 Changed Calcipressin
Calci_bind_CcbP PF11535 Family 21 38 102.50 31 76.42 Changed Calcium binding
CALCOCO1 PF07888 Coiled-coil 11 333 309.20 34 58.01 Changed Calcium binding and coiled-coil domain (CALCOCO1) like
Calcyon PF06387 Family 14 165 161.80 54 86.66 Changed D1 dopamine receptor-interacting protein (calcyon)
Calc_CGRP_IAPP PF00214 Family 66 311 114.90 28 83.37 Changed Calcitonin / CGRP / IAPP family
Caldesmon PF02029 Disordered 17 236 324.90 32 80.48 Changed Caldesmon
Caleosin PF05042 Family 125 430 151.90 42 66.24 Changed Caleosin related protein
Calici_coat PF00915 Family 4 7 265.90 28 17.13 Changed Calicivirus coat protein
Calici_coat_C PF08435 Family 29 1 224.00 100 42.26 Changed Calicivirus coat protein C-terminal
Calici_MSP PF05752 Family 1 2 129.00 23 89.27 Changed Calicivirus minor structural protein
Calici_PP_N PF08405 Family 1 1 358.00 100 20.01 Changed Viral polyprotein N-terminal
Calmodulin_bind PF07887 Family 76 524 255.80 38 49.61 Changed Calmodulin binding protein-like
CALM_bind PF16025 Family 35 129 82.20 29 11.10 Changed Calcium-dependent calmodulin binding
Calpain_III PF01067 Domain 175 1657 131.70 30 18.50 Changed Calpain large subunit, domain III
Calpain_inhib PF00748 Family 53 410 134.50 33 75.65 Changed Calpain inhibitor
Calpain_u2 PF16648 Disordered 10 63 67.90 64 8.58 Changed Unstructured region on Calpain-3
Calponin PF00402 Repeat 71 1343 24.20 60 19.27 Changed Calponin family repeat
Calreticulin PF00262 Family 117 1515 215.10 33 66.09 Changed Calreticulin family
Calsarcin PF05556 Family 35 235 254.50 34 80.26 Changed Calcineurin-binding protein (Calsarcin)
Calsequestrin PF01216 Family 2 200 327.10 58 91.69 Changed Calsequestrin
Calx-beta PF03160 Domain 32 6090 96.30 21 23.31 Changed Calx-beta domain
Calycin_like PF13944 Domain 53 94 125.50 18 37.08 Changed Calycin-like beta-barrel domain
CaM-KIIN PF15170 Family 7 67 74.90 73 98.72 Changed Calcium/calmodulin-dependent protein kinase II inhibitor
CaMBD PF02888 Family 35 388 72.50 59 13.21 Changed Calmodulin binding domain
CaMKII_AD PF08332 Domain 5 588 122.80 60 28.06 Changed Calcium/calmodulin dependent protein kinase II association domain
CAML PF14963 Family 15 72 229.50 57 67.21 Changed Calcium signal-modulating cyclophilin ligand
Campylo_MOMP PF05538 Family 4 20 389.50 24 96.78 Changed Campylobacter major outer membrane protein
CAMP_factor PF07373 Family 9 19 206.90 28 67.88 Changed CAMP factor (Cfa)
CamS PF07537 Family 56 109 297.90 31 82.87 Changed CamS sex pheromone cAM373 precursor
CAMSAP_CC1 PF17095 Family 40 297 58.30 53 4.14 Changed Spectrin-binding region of Ca2+-Calmodulin
CAMSAP_CH PF11971 Domain 19 477 81.50 39 6.99 Changed CAMSAP CH domain
CAMSAP_CKK PF08683 Domain 27 354 116.30 56 9.20 Changed Microtubule-binding calmodulin-regulated spectrin-associated
CaM_bdg_C0 PF10562 Domain 8 118 29.00 66 3.19 Changed Calmodulin-binding domain C0 of NMDA receptor NR1 subunit
CaM_binding PF07839 Domain 58 269 107.40 29 21.42 Changed Plant calmodulin-binding domain
Candida_ALS PF05792 Repeat 477 1737 32.40 39 33.85 Changed Candida agglutinin-like (ALS)
Candida_ALS_N PF11766 Domain 82 114 245.10 33 25.04 Changed Cell-wall agglutinin N-terminal ligand-sugar binding
CAP PF00188 Domain 94 5197 124.10 19 44.68 Changed Cysteine-rich secretory protein family
CAP-ZIP_m PF15255 Family 15 179 128.90 37 14.87 Changed WASH complex subunit CAP-Z interacting, central region
CAP160 PF07918 Repeat 9 47 26.10 67 6.74 Changed CAP160 repeat
CAP18_C PF12153 Domain 11 30 27.90 48 16.34 Changed LPS binding domain of CAP18 (C terminal)
CAP59_mtransfer PF11735 Family 205 439 243.60 31 49.95 Changed Cryptococcal mannosyltransferase 1
Caprin-1_C PF12287 Family 31 173 267.80 48 38.32 Changed Cytoplasmic activation/proliferation-associated protein-1 C term
Capsid-VNN PF11729 Family 1 1 340.00 100 100.00 Changed nodavirus capsid protein
Capsid_N PF16903 Domain 8 30 191.20 20 40.74 Changed Major capsid protein N-terminus
Capsid_NCLDV PF04451 Family 17 25 215.50 22 38.65 Changed Large eukaryotic DNA virus major capsid protein
Capsid_VP7 PF17071 Family 2 2 274.50 30 100.00 Changed Outer capsid protein VP7
Capsule_synth PF05159 Family 7 409 210.00 19 61.66 Changed Capsule polysaccharide biosynthesis protein
Caps_assemb_Wzi PF14052 Family 40 242 432.40 14 84.92 Changed Capsule assembly protein Wzi
Caps_synth PF05704 Family 28 197 216.00 19 57.00 Changed Capsular polysaccharide synthesis protein
Caps_synth_CapC PF14102 Family 61 95 117.90 27 57.22 Changed Capsule biosynthesis CapC
Caps_synth_GfcC PF06251 Family 9 149 212.70 18 32.61 Changed Capsule biosynthesis GfcC
CAP_assoc_N PF14504 Domain 57 108 136.70 24 36.40 Changed CAP-associated N-terminal
CAP_C PF08603 Family 172 555 152.30 39 32.04 Changed Adenylate cyclase associated (CAP) C terminal
CAP_GLY PF01302 Domain 807 3092 66.90 37 10.34 Changed CAP-Gly domain
CAP_N PF01213 Family 178 591 260.30 33 57.96 Changed Adenylate cyclase associated (CAP) N terminal
Carbam_trans_C PF16861 Domain 206 369 170.10 43 29.55 Changed Carbamoyltransferase C-terminus
Carbam_trans_N PF02543 Domain 6 406 286.20 28 55.40 Changed Carbamoyltransferase N-terminus
CarbopepD_reg_2 PF13715 Domain 109 7289 83.80 30 8.93 Changed CarboxypepD_reg-like domain
Carboxyl_trans PF01039 Family 30 4756 397.70 25 58.95 Changed Carboxyl transferase domain
CarboxypepD_reg PF13620 Domain 405 4431 80.70 22 11.51 Changed Carboxypeptidase regulatory-like domain
CarbpepA_inh PF02977 Domain 7 17 42.90 35 54.44 Changed Carboxypeptidase A inhibitor
Carbpep_Y_N PF05388 Family 16 125 104.90 28 19.45 Changed Carboxypeptidase Y pro-peptide
Carb_anhydrase PF00194 Domain 392 2998 216.70 27 62.88 Changed Eukaryotic-type carbonic anhydrase
Carb_bind PF10645 Domain 31 46 48.00 44 14.85 Changed Carbohydrate binding
Carb_kinase PF01256 Family 9 2027 242.10 28 56.78 Changed Carbohydrate kinase
Carcinustatin PF08261 Family 2 0 0.00 0 0.00 Changed Carcinustatin peptide
CARD PF00619 Domain 49 1705 84.30 21 14.12 Changed Caspase recruitment domain
CARDB PF07705 Domain 42 964 107.00 20 16.94 Changed CARDB
CARD_2 PF16739 Domain 54 304 90.00 25 18.37 Changed Caspase recruitment domain
CarD_CdnL_TRCF PF02559 Family 963 2209 100.80 29 11.98 Changed CarD-like/TRCF domain
Carla_C4 PF01623 Family 10 1 90.00 100 83.33 Changed Carlavirus putative nucleic acid binding protein
CARM1 PF11531 Family 7 100 90.90 55 17.77 Changed Coactivator-associated arginine methyltransferase 1 N terminal
CARMIL_C PF16000 Family 37 280 227.10 29 21.69 Changed CARMIL C-terminus
Carmo_coat_C PF08462 Family 8 1 99.00 100 28.45 Changed Carmovirus coat protein
Carn_acyltransf PF00755 Family 461 1847 495.90 27 79.03 Changed Choline/Carnitine o-acyltransferase
Carot_N PF09150 Domain 54 125 146.20 41 66.57 Changed Orange carotenoid protein, N-terminal
CART PF06373 Family 12 81 67.70 70 59.46 Changed Cocaine and amphetamine regulated transcript protein (CART)
Cas1_AcylT PF07779 Domain 23 419 391.70 31 64.54 Changed 10 TM Acyl Transferase domain found in Cas1p
Cas6 PF09559 Family 35 39 198.20 33 90.91 Changed Cas6 Crispr
Cas9-BH PF16593 Family 43 67 33.50 44 2.51 Changed Bridge helix of CRISPR-associated endonuclease Cas9
Cas9_PI PF16595 Domain 47 60 251.70 21 19.84 Changed PAM-interacting domain of CRISPR-associated endonuclease Cas9
Cas9_REC PF16592 Domain 13 63 515.50 28 40.58 Changed REC lobe of CRISPR-associated endonuclease Cas9
Casc1 PF12366 Family 19 106 221.80 21 36.02 Changed Cancer susceptibility candidate 1
Casc1_N PF15927 Family 40 173 190.10 24 25.51 Changed Cancer susceptibility candidate 1 N-terminus
Casein PF00363 Family 19 72 80.60 25 39.99 Changed Casein
Casein_kappa PF00997 Family 15 34 155.50 54 76.65 Changed Kappa casein
Caskin-Pro-rich PF16907 Family 17 130 89.30 54 7.09 Changed Proline rich region of Caskin proteins
Caskin-tail PF16632 Disordered 20 134 59.20 63 4.82 Changed C-terminal region of Caskin
Caskin1-CID PF16600 Family 10 83 50.50 65 4.14 Changed Caskin1 CASK-interaction domain
CASP_C PF08172 Family 97 337 224.50 31 35.81 Changed CASP C terminal
Cass2 PF14526 Domain 36 509 148.70 17 67.16 Changed Integron-associated effector binding protein
Cast PF10174 Family 13 519 346.90 31 67.42 Changed RIM-binding protein of the cytomatrix active zone
Castor_Poll_mid PF06241 Family 13 224 100.80 39 13.92 Changed Castor and Pollux, part of voltage-gated ion channel
Cas_APE2256 PF09651 Family 20 77 133.90 25 39.78 Changed CRISPR-associated protein (Cas_APE2256)
Cas_Cas02710 PF09670 Family 8 75 258.10 16 68.99 Changed CRISPR-associated protein (Cas_Cas02710)
Cas_Cas1 PF01867 Family 406 1200 238.10 20 77.00 Changed CRISPR associated protein Cas1
Cas_Cas2CT1978 PF09707 Family 80 137 84.20 42 69.54 Changed CRISPR-associated protein (Cas_Cas2CT1978)
Cas_Cas4 PF01930 Family 43 719 161.50 21 38.59 Changed Domain of unknown function DUF83
Cas_Cas5d PF09704 Family 51 555 202.00 16 83.76 Changed CRISPR-associated protein (Cas_Cas5)
Cas_Cas6 PF01881 Family 145 261 149.10 20 60.21 Changed CRISPR associated protein Cas6
Cas_Cas7 PF05107 Family 138 319 264.00 31 89.89 Changed CRISPR-associated protein Cas7
Cas_Cmr3 PF09700 Family 19 136 325.60 16 87.36 Changed CRISPR-associated protein (Cas_Cmr3)
Cas_Cmr5 PF09701 Family 56 89 119.00 22 85.50 Changed CRISPR-associated protein (Cas_Cmr5)
Cas_Csa4 PF09703 Family 6 8 356.90 21 93.79 Changed CRISPR-associated protein (Cas_Csa4)
Cas_Csa5 PF09702 Family 5 9 96.00 34 73.47 Changed CRISPR-associated protein (Cas_Csa5)
Cas_Csd1 PF09709 Family 132 202 564.10 24 96.65 Changed CRISPR-associated protein (Cas_Csd1)
CAS_CSE1 PF03378 Family 15 480 387.10 30 44.64 Changed CAS/CSE protein, C-terminus
Cas_Csm6 PF09659 Family 7 34 265.40 19 85.52 Changed CRISPR-associated protein (Cas_Csm6)
Cas_Csn2 PF09711 Family 11 59 177.90 20 80.81 Changed CRISPR-associated protein (Cas_Csn2)
Cas_csx3 PF09620 Family 19 31 77.80 32 40.50 Changed CRISPR-associated protein (Cas_csx3)
Cas_Csx8 PF09657 Family 2 13 324.30 32 96.17 Changed CRISPR-associated protein Csx8 (Cas_Csx8)
Cas_Csx9 PF09658 Family 2 2 377.00 90 94.49 Changed CRISPR-associated protein (Cas_Csx9)
Cas_Csy1 PF09611 Family 38 59 327.00 30 81.13 Changed CRISPR-associated protein (Cas_Csy1)
Cas_Csy2 PF09614 Family 44 56 289.70 33 91.24 Changed CRISPR-associated protein (Cas_Csy2)
Cas_Csy3 PF09615 Family 43 57 325.20 52 96.82 Changed CRISPR-associated protein (Cas_Csy3)
Cas_Csy4 PF09618 Family 51 63 182.60 33 95.70 Changed CRISPR-associated protein (Cas_Csy4)
Cas_CT1975 PF09344 Family 67 173 356.70 32 95.61 Changed CT1975-like protein
Cas_CXXC_CXXC PF09706 Domain 6 49 64.90 25 12.33 Changed CRISPR-associated protein (Cas_CXXC_CXXC)
Cas_DxTHG PF09455 Family 71 139 368.40 14 83.53 Changed CRISPR-associated (Cas) DxTHG family
Cas_GSU0053 PF09617 Family 28 43 175.40 28 47.27 Changed CRISPR-associated protein GSU0053 (Cas_GSU0053)
Cas_GSU0054 PF09609 Family 2 18 303.40 21 64.66 Changed CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
Cas_NE0113 PF09623 Family 12 58 195.10 24 56.10 Changed CRISPR-associated protein NE0113 (Cas_NE0113)
Cas_St_Csn2 PF16813 Domain 4 14 297.90 21 97.80 Changed CRISPR-associated protein Csn2 subfamily St
Cas_TM1802 PF09484 Family 32 83 458.80 15 88.58 Changed CRISPR-associated protein TM1802 (cas_TM1802)
Cas_VVA1548 PF09652 Domain 14 19 89.60 35 49.78 Changed Putative CRISPR-associated protein (Cas_VVA1548)
CAT PF00302 Domain 8 279 195.60 26 94.08 Changed Chloramphenicol acetyltransferase
Catalase PF00199 Domain 413 2280 350.30 43 67.30 Changed Catalase
Catalase-rel PF06628 Family 692 1899 64.40 25 11.55 Changed Catalase-related immune-responsive
Cathelicidins PF00666 Domain 8 177 96.10 38 58.41 Changed Cathelicidin
CathepsinC_exc PF08773 Domain 35 168 122.10 37 25.59 Changed Cathepsin C exclusion domain
Cation_ATPase PF13246 Family 105 5883 107.10 23 9.48 Changed Cation transport ATPase (P-type)
Cation_ATPase_C PF00689 Family 135 6378 182.40 22 18.75 Changed Cation transporting ATPase, C-terminus
Cation_ATPase_N PF00690 Domain 137 7097 66.20 25 6.79 Changed Cation transporter/ATPase, N-terminus
Cation_efflux PF01545 Family 65 6656 206.70 20 54.49 Changed Cation efflux family
CATSPERB PF15149 Family 13 51 419.40 51 51.96 Changed Cation channel sperm-associated protein subunit beta protein family
CATSPERD PF15020 Family 11 111 406.30 28 66.27 Changed Cation channel sperm-associated protein subunit delta
CATSPERG PF15064 Family 4 95 513.10 38 81.89 Changed Cation channel sperm-associated protein subunit gamma
CAT_RBD PF03123 Domain 219 516 56.00 35 20.38 Changed CAT RNA binding domain
Caudal_act PF04731 Family 30 145 130.10 34 49.82 Changed Caudal like protein activation region
Caudo_bapla16 PF16792 Domain 9 0 0.00 0 0.00 Changed Phage tail base-plate attachment protein of Caudovirales ORF16
Caudo_bapla_RBP PF08931 Domain 6 0 0.00 0 0.00 Changed Receptor-binding protein of phage tail base-plate Siphoviridae, head
Caudo_TAP PF02413 Family 33 170 123.20 26 70.69 Changed Caudovirales tail fibre assembly protein, lambda gpK
Caud_tail_N PF16838 Domain 2 3 113.00 29 14.61 Changed Caudoviral major tail protein N-terminus
Cauli_AT PF03233 Family 6 2 154.50 15 61.68 Changed Aphid transmission protein
Cauli_DNA-bind PF03310 Family 3 4 99.80 19 61.38 Changed Caulimovirus DNA-binding protein
Cauli_VI PF01693 Family 308 1091 43.60 35 14.68 Changed Caulimovirus viroplasmin
Caveolin PF01146 Family 39 309 130.90 40 75.56 Changed Caveolin
CAV_VP3 PF04771 Family 1 1 121.00 100 100.00 Changed Chicken anaemia virus VP-3 protein
Ca_chan_IQ PF08763 Domain 48 811 76.10 57 4.10 Changed Voltage gated calcium channel IQ domain
Ca_hom_mod PF14798 Family 79 366 231.60 35 75.92 Changed Calcium homeostasis modulator
CBAH PF02275 Domain 8 809 268.70 22 78.31 Changed Linear amide C-N hydrolases, choloylglycine hydrolase family
CbbQ_C PF08406 Family 140 321 84.40 30 28.84 Changed CbbQ/NirQ/NorQ C-terminal
CbeA_antitoxin PF06154 Family 11 26 97.50 63 87.60 Changed CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A
CBF PF03914 Family 399 1210 172.10 26 22.88 Changed CBF/Mak21 family
CBFB_NFYA PF02045 Family 69 767 56.50 66 19.25 Changed CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
CBFD_NFYB_HMF PF00808 Domain 27 3453 64.30 30 30.93 Changed Histone-like transcription factor (CBF/NF-Y) and archaeal histone
CBFNT PF08143 Domain 15 114 64.20 43 20.77 Changed CBFNT (NUC161) domain
CBF_beta PF02312 Family 19 152 135.00 50 75.53 Changed Core binding factor beta subunit
CbiA PF01656 Domain 78 7000 203.40 15 52.64 Changed CobQ/CobB/MinD/ParA nucleotide binding domain
CbiC PF02570 Family 429 750 194.20 38 81.14 Changed Precorrin-8X methylmutase
CbiD PF01888 Family 344 532 257.80 38 67.45 Changed CbiD
CbiG_C PF01890 Domain 493 618 120.50 30 34.94 Changed Cobalamin synthesis G C-terminus
CbiG_mid PF11761 Domain 95 234 92.40 18 21.51 Changed Cobalamin biosynthesis central region
CbiG_N PF11760 Domain 343 516 81.40 43 19.25 Changed Cobalamin synthesis G N-terminal
CbiJ PF02571 Family 358 563 241.50 29 78.13 Changed Precorrin-6x reductase CbiJ/CobK
CbiK PF06180 Family 8 314 256.60 34 80.93 Changed Cobalt chelatase (CbiK)
CbiM PF01891 Family 111 757 205.50 27 81.94 Changed Cobalt uptake substrate-specific transmembrane region
CbiN PF02553 Family 105 215 69.30 44 65.57 Changed Cobalt transport protein component CbiN
CbiQ PF02361 Family 17 2365 212.50 19 77.22 Changed Cobalt transport protein
CbiX PF01903 Domain 68 1397 104.40 22 63.59 Changed CbiX
CbiZ PF01955 Family 151 222 192.20 28 62.46 Changed Adenosylcobinamide amidohydrolase
CblD PF07434 Family 2 17 350.30 34 81.18 Changed CblD like pilus biogenesis initiator
Cbl_N PF02262 Domain 37 272 116.20 60 16.57 Changed CBL proto-oncogene N-terminal domain 1
Cbl_N2 PF02761 Domain 31 275 81.80 65 11.43 Changed CBL proto-oncogene N-terminus, EF hand-like domain
Cbl_N3 PF02762 Domain 19 265 83.80 79 11.68 Changed CBL proto-oncogene N-terminus, SH2-like domain
CBM-like PF14683 Domain 158 501 176.90 29 29.57 Changed Polysaccharide lyase family 4, domain III
CBM26 PF16738 Domain 80 190 71.20 25 11.18 Changed Starch-binding module 26
CBM27 PF09212 Domain 2 15 172.20 20 15.79 Changed Carbohydrate binding module 27
CBM39 PF15886 Domain 41 158 116.80 25 34.45 Changed Carbohydrate binding domain (family 32)
CBM49 PF09478 Domain 23 306 83.50 26 19.44 Changed Carbohydrate binding domain CBM49
CBM53 PF16760 Family 180 362 84.00 26 21.65 Changed Starch/carbohydrate-binding module (family 53)
CBM60 PF16841 Domain 41 87 91.90 27 17.32 Changed Ca-dependent carbohydrate-binding module xylan-binding
CBM9_1 PF06452 Domain 22 374 180.10 18 25.75 Changed Carbohydrate family 9 binding domain-like
CBM9_2 PF16011 Family 13 124 190.60 29 83.56 Changed Carbohydrate-binding family 9
CBM_1 PF00734 Domain 762 1684 28.80 49 7.47 Changed Fungal cellulose binding domain
CBM_10 PF02013 Domain 92 58 30.10 56 5.59 Changed Cellulose or protein binding domain
CBM_11 PF03425 Family 6 78 170.80 18 23.00 Changed Carbohydrate binding domain (family 11)
CBM_14 PF01607 Domain 152 6280 53.50 24 21.59 Changed Chitin binding Peritrophin-A domain
CBM_15 PF03426 Domain 2 1 159.00 100 26.24 Changed Carbohydrate binding domain (family 15)
CBM_17_28 PF03424 Domain 8 20 181.80 34 40.84 Changed Carbohydrate binding domain (family 17/28)
CBM_19 PF03427 Domain 2 39 61.10 31 12.67 Changed Carbohydrate binding domain (family 19)
CBM_2 PF00553 Domain 14 972 97.90 31 16.82 Changed Cellulose binding domain
CBM_20 PF00686 Family 55 1291 93.20 23 15.68 Changed Starch binding domain
CBM_21 PF03370 Family 60 811 110.10 31 21.61 Changed Carbohydrate/starch-binding module (family 21)
CBM_25 PF03423 Domain 2 78 102.50 37 17.01 Changed Carbohydrate binding domain (family 25)
CBM_26 PF16824 Family 8 18 127.20 39 26.85 Changed C-terminal carbohydrate-binding module
CBM_3 PF00942 Domain 136 239 83.20 23 11.34 Changed Cellulose binding domain
CBM_35 PF16990 Domain 5 223 123.40 25 18.24 Changed Carbohydrate binding module (family 35)
CBM_48 PF02922 Domain 40 3464 85.20 25 11.85 Changed Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CBM_4_9 PF02018 Domain 47 1127 135.20 16 24.42 Changed Carbohydrate binding domain
CBM_5_12 PF02839 Family 42 797 42.10 32 8.80 Changed Carbohydrate binding domain
CBM_5_12_2 PF14600 Domain 11 40 60.40 48 6.90 Changed Cellulose-binding domain
CBM_6 PF03422 Family 34 967 121.60 22 17.70 Changed Carbohydrate binding module (family 6)
CBM_X2 PF03442 Domain 67 206 84.30 28 13.81 Changed Carbohydrate binding domain X2
CBP PF12192 Domain 4 17 71.90 31 43.66 Changed Fungal calcium binding protein
CBP4 PF07960 Family 34 170 112.40 31 86.85 Changed CBP4
CBP_BcsF PF11120 Family 9 26 59.40 38 93.07 Changed Cellulose biosynthesis protein BcsF
CBP_BcsG PF11658 Family 32 51 510.50 44 95.16 Changed Cellulose biosynthesis protein BcsG
CBP_BcsN PF17038 Family 1 13 258.50 30 81.98 Changed Cellulose biosynthesis protein BcsN
CBP_BcsO PF17037 Family 2 13 170.70 24 85.78 Changed Cellulose biosynthesis protein BcsO
CBP_BcsQ PF06564 Domain 15 121 214.70 24 69.66 Changed Cellulose biosynthesis protein BcsQ
CBP_BcsR PF10945 Family 11 31 41.80 49 48.04 Changed Cellulose biosynthesis protein BcsR
CBP_BcsS PF17036 Family 20 26 145.70 25 55.82 Changed Cellulose biosynthesis protein BcsS
CBP_CCPA PF17040 Family 2 2 324.00 39 97.01 Changed Cellulose-complementing protein A
CBP_GIL PF10995 Family 20 42 303.00 37 58.98 Changed GGDEF I-site like or GIL domain
CBS PF00571 Domain 840 35323 57.80 19 24.94 Changed CBS domain
CbtA PF09490 Family 92 181 231.20 30 92.59 Changed Probable cobalt transporter subunit (CbtA)
CbtA_toxin PF06755 Family 4 35 97.30 43 70.93 Changed CbtA_toxin of type IV toxin-antitoxin system
CbtB PF09489 Family 28 185 56.30 36 81.30 Changed Probable cobalt transporter subunit (CbtB)
CC PF04942 Domain 41 115 33.40 32 15.53 Changed CC domain
CC2-LZ PF16516 Domain 25 276 103.60 33 21.94 Changed Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
CC2D2AN-C2 PF15625 Family 50 168 165.20 35 12.49 Changed CC2D2A N-terminal C2 domain
CCAP PF11105 Family 6 37 104.30 34 73.46 Changed Arthropod cardioacceleratory peptide 2a
CCCAP PF15964 Family 5 158 391.10 29 78.71 Changed Centrosomal colon cancer autoantigen protein family
CCD PF07860 Family 1 2 100.00 93 4.49 Changed WisP family C-Terminal Region
CCD48 PF15799 Family 8 136 242.40 29 97.40 Changed Coiled-coil domain-containing protein 48
CcdA PF07362 Domain 58 139 65.70 26 79.60 Changed Post-segregation antitoxin CcdA
CcdB PF01845 Domain 57 88 97.70 32 93.92 Changed CcdB protein
CCDC-167 PF15188 Coiled-coil 24 70 82.50 47 75.50 Changed Coiled-coil domain-containing protein 167
CCDC106 PF15794 Family 12 129 164.90 36 74.88 Changed Coiled-coil domain-containing protein 106
CCDC117 PF15810 Family 11 60 133.80 55 52.16 Changed Coiled-coil domain-containing protein 117
CCDC14 PF15254 Coiled-coil 16 96 502.10 39 85.82 Changed Coiled-coil domain-containing protein 14
CCDC142 PF14923 Coiled-coil 9 92 356.10 34 55.21 Changed Coiled-coil protein 142
CCDC144C PF14915 Coiled-coil 54 286 234.40 45 25.25 Changed CCDC144C protein coiled-coil region
CCDC158 PF15921 Family 3 96 601.50 47 92.68 Changed Coiled-coil domain-containing protein 158
CCDC168_N PF15804 Repeat 13 153 136.60 18 40.12 Changed Coiled-coil domain-containing protein 168
CCDC23 PF15674 Family 8 53 61.70 72 44.53 Changed Coiled-coil domain-containing protein 23
CCDC24 PF15669 Family 25 85 163.00 35 61.09 Changed Coiled-coil domain-containing protein 24 family
CCDC32 PF14989 Coiled-coil 20 109 133.80 39 71.00 Changed Coiled-coil domain containing 32
CCDC50_N PF15295 Coiled-coil 18 146 121.20 44 28.42 Changed Coiled-coil domain-containing protein 50 N-terminus
CCDC66 PF15236 Coiled-coil 18 134 143.90 36 15.99 Changed Coiled-coil domain-containing protein 66
CCDC71L PF15374 Coiled-coil 14 83 263.30 41 85.76 Changed Coiled-coil domain-containing protein 71L
CCDC73 PF15818 Family 13 85 593.50 46 93.67 Changed Coiled-coil domain-containing protein 73 family
CCDC74_C PF14917 Coiled-coil 13 49 113.70 51 33.58 Changed Coiled coil protein 74, C terminal
CCDC84 PF14968 Coiled-coil 26 142 244.40 32 86.38 Changed Coiled coil protein 84
CCDC92 PF14916 Coiled-coil 18 199 54.90 41 18.80 Changed Coiled-coil domain of unknown function
CCER1 PF15482 Coiled-coil 7 33 182.30 59 53.82 Changed Coiled-coil domain-containing glutamate-rich protein family 1
CCG PF02754 Family 58 5860 86.50 19 29.88 Changed Cysteine-rich domain
CclA_1 PF16942 Family 3 0 0.00 0 0.00 Changed Putative cyclic bacteriocin
CCM2_C PF16545 Domain 10 139 95.50 67 20.92 Changed Cerebral cavernous malformation protein, harmonin-homology
CcmB PF03379 Family 10 465 213.80 32 95.01 Changed CcmB protein
CcmD PF04995 Family 135 265 43.80 27 67.59 Changed Heme exporter protein D (CcmD)
CcmE PF03100 Family 255 518 128.60 35 76.83 Changed CcmE
CcmF_C PF16327 Family 190 548 297.90 28 46.68 Changed Cytochrome c-type biogenesis protein CcmF C-terminal
CcmH PF03918 Family 180 471 139.20 30 80.45 Changed Cytochrome C biogenesis protein
CCP_MauG PF03150 Family 556 844 163.10 31 40.75 Changed Di-haem cytochrome c peroxidase
CCSAP PF15748 Family 32 81 232.00 40 94.52 Changed Centriole, cilia and spindle-associated
CCSMST1 PF15013 Family 32 88 74.40 35 49.94 Changed CCSMST1 family
CCT PF06203 Motif 121 1445 43.60 50 11.38 Changed CCT motif
CCT_2 PF09425 Motif 55 551 25.30 60 10.28 Changed Divergent CCT motif
CD20 PF04103 Family 43 1133 132.20 20 45.09 Changed CD20-like family
CD225 PF04505 Family 148 957 66.60 31 37.67 Changed Interferon-induced transmembrane protein
CD24 PF14984 Family 15 36 52.20 66 61.39 Changed CD24 protein
CD34_antigen PF06365 Family 21 203 178.20 34 41.78 Changed CD34/Podocalyxin family
CD36 PF01130 Family 255 1023 365.20 23 81.46 Changed CD36 family
CD4-extracel PF09191 Domain 20 53 105.00 58 23.42 Changed CD4, extracellular
CD45 PF12567 Family 19 45 58.60 47 5.27 Changed Leukocyte receptor CD45
CD47 PF04549 Family 19 74 144.40 55 49.01 Changed CD47 transmembrane region
CD52 PF15116 Family 10 22 46.60 44 67.17 Changed CAMPATH-1 antigen
CD99L2 PF12301 Family 15 172 146.00 36 80.32 Changed CD99 antigen like protein 2
CdAMP_rec PF06153 Family 10 282 106.50 42 97.24 Changed Cyclic-di-AMP receptor
CDC13_N PF16853 Domain 13 21 213.10 30 24.22 Changed Cell division control protein 13 N-terminus
CDC14 PF08045 Family 45 208 221.70 32 73.79 Changed Cell division control protein 14, SIN component
CDC24 PF06395 Domain 17 198 89.30 38 9.92 Changed CDC24 Calponin
CDC27 PF09507 Family 10 381 363.70 20 86.96 Changed DNA polymerase subunit Cdc27
CDC37_C PF08564 Domain 31 345 87.40 28 19.74 Changed Cdc37 C terminal domain
CDC37_M PF08565 Domain 58 416 113.10 33 26.50 Changed Cdc37 Hsp90 binding domain
CDC37_N PF03234 Domain 111 350 148.10 30 33.97 Changed Cdc37 N terminal kinase binding
CDC45 PF02724 Family 124 571 455.90 26 93.29 Changed CDC45-like protein
CDC48_2 PF02933 Domain 82 1159 68.20 27 8.83 Changed Cell division protein 48 (CDC48), domain 2
CDC48_N PF02359 Domain 102 1156 83.10 31 10.99 Changed Cell division protein 48 (CDC48), N-terminal domain
CDC4_D PF16856 Domain 27 37 50.70 38 6.74 Changed Cell division control protein 4 dimerisation domain
CDC50 PF03381 Family 345 957 269.20 32 75.90 Changed LEM3 (ligand-effect modulator 3) family / CDC50 family
Cdc6_C PF09079 Domain 209 680 79.80 20 15.01 Changed CDC6, C terminal winged helix domain
CDC73_C PF05179 Domain 155 432 159.10 34 35.57 Changed RNA pol II accessory factor, Cdc73 family, C-terminal
CDC73_N PF16050 Family 21 220 226.70 34 50.28 Changed Paf1 complex subunit CDC73 N-terminal
CdCA1 PF10563 Repeat 8 25 176.90 35 54.03 Changed Cadmium carbonic anhydrase repeat
Cdd1 PF11731 Family 32 74 84.30 33 74.84 Changed Pathogenicity locus
CDH PF02611 Family 46 85 212.80 34 84.32 Changed CDP-diacylglycerol pyrophosphatase
CDH-cyt PF16010 Family 159 568 168.90 23 33.28 Changed Cytochrome domain of cellobiose dehydrogenase
CdhC PF03598 Domain 64 131 154.00 40 26.08 Changed CO dehydrogenase/acetyl-CoA synthase complex beta subunit
CdhD PF03599 Family 9 253 298.30 23 72.82 Changed CO dehydrogenase/acetyl-CoA synthase delta subunit
CDI PF02234 Family 122 462 48.90 33 24.28 Changed Cyclin-dependent kinase inhibitor
CDK2AP PF09806 Family 10 184 116.30 47 69.39 Changed Cyclin-dependent kinase 2-associated protein
CDK5_activator PF03261 Family 11 212 197.60 46 70.26 Changed Cyclin-dependent kinase 5 activator protein
CDKN3 PF05706 Domain 2 155 133.90 35 59.64 Changed Cyclin-dependent kinase inhibitor 3 (CDKN3)
CDO_I PF05995 Domain 4 617 148.60 25 70.73 Changed Cysteine dioxygenase type I
CDP-OH_P_transf PF01066 Family 1015 6065 69.30 29 26.52 Changed CDP-alcohol phosphatidyltransferase
CDP-OH_P_tran_2 PF08009 Domain 47 100 36.90 34 13.12 Changed CDP-alcohol phosphatidyltransferase 2
CDPS PF16715 Domain 18 45 199.80 22 81.70 Changed Cyclodipeptide synthase
CDRN PF05174 Domain 4 6 54.70 74 18.23 Changed Cysteine-rich D. radiodurans N terminus
CDRT4 PF15213 Family 16 34 134.40 61 84.42 Changed CMT1A duplicated region transcript 4 protein
CDT1 PF08839 Domain 60 372 153.90 20 22.25 Changed DNA replication factor CDT1 like
CDT1_C PF16679 Domain 115 397 97.60 24 18.55 Changed DNA replication factor Cdt1 C-terminal domain
CDtoxinA PF03498 Domain 10 25 141.80 24 68.86 Changed Cytolethal distending toxin A/C domain
CDV3 PF15359 Family 24 142 121.30 41 54.80 Changed Carnitine deficiency-associated protein 3
CEBP1_N PF16368 Family 9 113 238.50 63 45.88 Changed Cytoplasmic polyadenylation element-binding protein 1 N-terminus
CEBP_ZZ PF16366 Domain 50 487 61.70 61 10.83 Changed Cytoplasmic polyadenylation element-binding protein ZZ domain
CECR6_TMEM121 PF14997 Family 17 169 189.30 32 49.55 Changed CECR6/TMEM121 family
Cecropin PF00272 Family 21 67 30.70 49 47.53 Changed Cecropin family
CedA PF10729 Family 2 11 74.50 73 90.81 Changed Cell division activator CedA
cEGF PF12662 Domain 562 3128 23.80 48 2.19 Changed Complement Clr-like EGF-like
CelD_N PF02927 Domain 121 307 85.20 25 11.40 Changed Cellulase N-terminal ig-like domain
Cellsynth_D PF03500 Family 2 38 124.90 28 81.41 Changed Cellulose synthase subunit D
Cellulase PF00150 Domain 65 4146 281.60 13 55.43 Changed Cellulase (glycosyl hydrolase family 5)
Cellulase-like PF12876 Domain 6 19 305.90 28 82.27 Changed Sugar-binding cellulase-like
Cellulose_synt PF03552 Family 12 1764 395.70 29 71.81 Changed Cellulose synthase
CemA PF03040 Family 53 195 194.50 36 60.20 Changed CemA family
Cementoin PF10511 Family 17 80 16.90 56 18.78 Changed Trappin protein transglutaminase binding domain
CEND1 PF15677 Family 7 43 138.70 59 96.30 Changed Cell cycle exit and neuronal differentiation protein 1
CENP-B_dimeris PF09026 Domain 2 37 89.50 58 17.26 Changed Centromere protein B dimerisation domain
CENP-B_N PF04218 Domain 6 701 52.10 26 11.30 Changed CENP-B N-terminal DNA-binding domain
CENP-C_C PF11699 Domain 11 260 84.50 36 12.39 Changed Mif2/CENP-C like
CENP-C_mid PF15620 Family 20 42 245.50 60 28.74 Changed Centromere assembly component CENP-C middle DNMT3B-binding region
CENP-F_C_Rb_bdg PF10490 Domain 10 65 45.70 67 1.74 Changed Rb-binding domain of kinetochore protein Cenp-F/LEK1
CENP-F_leu_zip PF10473 Domain 28 161 138.60 33 12.13 Changed Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
CENP-F_N PF10481 Domain 14 83 258.90 56 11.09 Changed Cenp-F N-terminal domain
CENP-H PF05837 Domain 80 165 114.90 26 46.42 Changed Centromere protein H (CENP-H)
CENP-I PF07778 Family 5 236 347.00 26 57.42 Changed Mis6
CENP-K PF11802 Family 16 118 206.80 32 81.63 Changed Centromere-associated protein K
CENP-L PF13092 Family 80 209 165.60 26 42.92 Changed Kinetochore complex Sim4 subunit Fta1
CENP-M PF11111 Family 16 76 160.00 46 93.87 Changed Centromere protein M (CENP-M)
CENP-N PF05238 Family 28 241 374.60 23 92.54 Changed Kinetochore protein CHL4 like
CENP-O PF09496 Family 65 266 174.60 21 55.03 Changed Cenp-O kinetochore centromere component
CENP-P PF13096 Family 3 60 133.50 46 58.54 Changed CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
CENP-Q PF13094 Family 84 162 162.30 23 43.23 Changed CENP-Q, a CENPA-CAD centromere complex subunit
CENP-R PF06729 Family 11 40 120.80 49 74.32 Changed Kinetochore component, CENP-R
CENP-S PF15630 Domain 42 298 73.60 38 42.85 Changed CENP-S protein
CENP-T_C PF15511 Domain 11 1002 84.10 57 44.43 Changed Centromere kinetochore component CENP-T histone fold
CENP-T_N PF16171 Family 13 61 309.10 46 71.14 Changed Centromere kinetochore component CENP-T N-terminus
CENP-U PF13097 Family 23 60 163.10 38 41.91 Changed CENP-A nucleosome associated complex (NAC) subunit
CENP-W PF15510 Domain 4 76 81.90 39 97.07 Changed CENP-W protein
CENP-X PF09415 Domain 85 249 72.30 35 50.57 Changed CENP-S associating Centromere protein X
CENP_C_N PF15622 Family 14 55 228.30 55 30.83 Changed Kinetochore assembly subunit CENP-C N-terminal
CEP1-DNA_bind PF09287 Domain 2 8 157.00 25 37.14 Changed CEP-1, DNA binding
CEP170_C PF15308 Family 24 218 517.50 42 44.29 Changed CEP170 C-terminus
CEP19 PF14933 Family 16 120 141.30 40 72.86 Changed CEP19-like protein
CEP209_CC5 PF16574 Family 18 84 126.70 59 5.98 Changed Coiled-coil region of centrosome protein CE290
Cep3 PF16846 Domain 14 32 372.80 28 62.41 Changed Centromere DNA-binding protein complex CBF3 subunit B
CEP44 PF15007 Family 32 111 122.70 48 31.03 Changed Centrosomal spindle body, CEP44
Cep57_CLD PF14073 Domain 35 177 162.50 51 37.71 Changed Centrosome localisation domain of Cep57
Cep57_CLD_2 PF14197 Family 22 123 70.00 29 8.48 Changed Centrosome localisation domain of PPC89
Cep57_MT_bd PF06657 Domain 88 268 74.80 31 10.59 Changed Centrosome microtubule-binding domain of Cep57
CEP63 PF17045 Family 10 162 230.90 50 43.39 Changed Centrosomal protein of 63 kDa
CEP76-C2 PF15627 Family 26 93 156.40 56 23.62 Changed CEP76 C2 domain
Ceramidase PF05875 Family 166 796 225.10 23 84.62 Changed Ceramidase
Ceramidase_alk PF04734 Domain 136 634 420.60 37 68.08 Changed Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C PF17048 Domain 155 488 159.80 35 22.97 Changed Neutral/alkaline non-lysosomal ceramidase, C-terminal
Cerato-platanin PF07249 Family 4 246 114.10 36 68.95 Changed Cerato-platanin
CesT PF05932 Domain 26 189 116.20 15 63.39 Changed Tir chaperone protein (CesT) family
CF222 PF15661 Family 12 42 490.90 51 97.24 Changed C6orf222, uncharacterised family
CfAFP PF05264 Family 4 0 0.00 0 0.00 Changed Choristoneura fumiferana antifreeze protein (CfAFP)
CFC PF09443 Domain 30 99 34.60 51 18.31 Changed Cripto_Frl-1_Cryptic (CFC)
CFEM PF05730 Domain 94 1483 66.30 24 21.59 Changed CFEM domain
CFIA_Pcf11 PF11526 Family 35 143 77.00 23 10.71 Changed Subunit of cleavage factor IA Pcf11
CFTR_R PF14396 Domain 15 88 206.90 67 14.99 Changed Cystic fibrosis TM conductance regulator (CFTR), regulator domain
CG-1 PF03859 Domain 38 420 105.50 52 10.75 Changed CG-1 domain
Cg6151-P PF10233 Domain 87 274 109.20 33 60.30 Changed Uncharacterized conserved protein CG6151-P
CGGC PF08821 Domain 100 135 105.50 30 87.10 Changed CGGC domain
CGI-121 PF08617 Domain 170 460 153.20 24 79.75 Changed Kinase binding protein CGI-121
Cgr1 PF03879 Family 80 354 103.70 32 56.01 Changed Cgr1 family
CgtA PF06306 Family 2 10 248.90 28 67.07 Changed Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)
CH PF00307 Domain 124 12830 107.50 19 12.77 Changed Calponin homology (CH) domain
ChaB PF06150 Domain 96 185 58.30 38 46.81 Changed ChaB
ChaC PF04752 Family 12 826 169.30 34 76.80 Changed ChaC-like protein
CHAD PF05235 Domain 368 563 232.40 21 55.53 Changed CHAD domain
Chalcone PF02431 Domain 8 154 185.90 34 81.14 Changed Chalcone-flavanone isomerase
Chalcone_2 PF16035 Family 89 309 177.00 28 52.50 Changed Chalcone isomerase like
Chalcone_3 PF16036 Family 60 281 156.80 20 71.15 Changed Chalcone isomerase-like
Chal_sti_synt_C PF02797 Domain 6 993 138.20 33 35.00 Changed Chalcone and stilbene synthases, C-terminal domain
Chal_sti_synt_N PF00195 Domain 5 987 187.50 33 50.09 Changed Chalcone and stilbene synthases, N-terminal domain
Channel_Tsx PF03502 Family 18 141 237.70 24 86.89 Changed Nucleoside-specific channel-forming protein, Tsx
CHAP PF05257 Domain 523 729 92.40 22 23.26 Changed CHAP domain
Chaperone_III PF07824 Domain 4 4 110.20 42 95.66 Changed Type III secretion chaperone domain
ChapFlgA PF13144 Family 58 516 176.00 19 70.57 Changed Chaperone for flagella basal body P-ring formation
ChAPs PF09295 Family 13 367 290.30 28 46.97 Changed ChAPs (Chs5p-Arf1p-binding proteins)
CHASE PF03924 Domain 208 682 175.00 18 19.76 Changed CHASE domain
CHASE2 PF05226 Domain 464 709 335.00 20 46.19 Changed CHASE2 domain
CHASE3 PF05227 Domain 130 647 136.70 19 20.34 Changed CHASE3 domain
CHASE4 PF05228 Domain 160 263 156.90 16 21.51 Changed CHASE4 domain
CHASE5 PF17149 Domain 3 78 106.80 24 15.79 New Periplasmic sensor domain found in signal transduction proteins
CHASE6_C PF17150 Family 68 83 84.60 42 14.57 New C-terminal domain of two-partite extracellular sensor domain
CHASE7 PF17151 Domain 9 17 178.80 38 33.18 New Periplasmic sensor domain
CHASE8 PF17152 Family 45 161 105.20 21 15.99 New Periplasmic sensor domain
CHASE9 PF17153 Family 5 1 116.00 100 14.83 New Periplasmic sensor domain, extracellular
CHAT PF12770 Domain 53 2097 279.30 18 26.99 Changed CHAT domain
CHB_HEX PF03173 Domain 32 103 150.70 26 17.74 Changed Putative carbohydrate binding domain
CHB_HEX_C PF03174 Domain 48 103 75.20 34 8.78 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHB_HEX_C_1 PF13290 Family 116 735 67.60 27 9.66 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHCH PF06747 Domain 50 1029 35.50 26 22.90 Changed CHCH domain
CHD5 PF04420 Family 112 341 153.10 25 74.65 Changed CHD5-like protein
CHDCT2 PF08074 Domain 19 331 157.80 74 9.34 Changed CHDCT2 (NUC038) domain
CHDNT PF08073 Domain 27 289 53.20 67 2.98 Changed CHDNT (NUC034) domain
CheB_methylest PF01339 Domain 999 1634 177.40 34 37.64 Changed CheB methylesterase
CheC PF04509 Domain 28 951 37.40 34 23.02 Changed CheC-like family
CheD PF03975 Family 321 587 104.90 31 57.57 Changed CheD chemotactic sensory transduction
CheF-arch PF04283 Family 33 65 199.50 23 69.08 Changed Chemotaxis signal transduction system protein F from archaea
CheR PF01739 Domain 20 1724 189.60 30 42.54 Changed CheR methyltransferase, SAM binding domain
CheR_N PF03705 Domain 752 1428 52.30 23 11.47 Changed CheR methyltransferase, all-alpha domain
CheW PF01584 Domain 219 4510 136.30 21 31.77 Changed CheW-like domain
CheX PF13690 Domain 68 509 97.30 21 48.67 Changed Chemotaxis phosphatase CheX
CheY-binding PF09078 Domain 45 82 62.60 39 9.13 Changed CheY binding
CheZ PF04344 Family 109 323 172.60 30 74.59 Changed Chemotaxis phosphatase, CheZ
CHGN PF05679 Family 67 776 406.30 23 62.31 Changed Chondroitin N-acetylgalactosaminyltransferase
Chi-conotoxin PF16981 Domain 50 0 0.00 0 0.00 Changed chi-Conotoxin or t superfamily
Chibby PF14645 Family 32 200 112.50 34 55.73 Changed Chibby family
ChiC PF06483 Family 21 49 170.60 44 18.86 Changed Chitinase C
CHIPS PF11434 Family 1 1 91.00 100 61.07 Changed Chemotaxis-inhibiting protein CHIPS
Chisel PF15355 Family 7 55 82.30 77 96.32 Changed Stretch-responsive small skeletal muscle X protein, Chisel
ChitinaseA_N PF08329 Domain 8 41 121.50 33 14.41 Changed Chitinase A, N-terminal domain
Chitin_bind_1 PF00187 Domain 201 1174 41.20 43 9.70 Changed Chitin recognition protein
Chitin_bind_4 PF00379 Family 107 3378 53.10 31 24.59 Changed Insect cuticle protein
Chitin_synth_1 PF01644 Family 111 680 162.60 53 17.61 Changed Chitin synthase
Chitin_synth_1N PF08407 Family 144 652 74.20 45 7.98 Changed Chitin synthase N-terminal
Chitin_synth_2 PF03142 Family 8 1121 381.70 30 33.77 Changed Chitin synthase
ChlamPMP_M PF07548 Family 14 26 164.70 22 17.24 Changed Chlamydia polymorphic membrane protein middle domain
Chlamy_scaf PF09675 Family 2 2 105.00 34 70.95 Changed Chlamydia-phage Chp2 scaffold (Chlamy_scaf)
Chlam_OMP PF01308 Family 2 5 262.60 25 75.55 Changed Chlamydia major outer membrane protein
Chlam_OMP3 PF03503 Family 2 1 54.00 100 61.36 Changed Chlamydia cysteine-rich outer membrane protein 3
Chlam_OMP6 PF03504 Family 2 4 75.80 39 12.59 Changed Chlamydia cysteine-rich outer membrane protein 6
Chlam_PMP PF02415 Repeat 524 215 22.30 44 5.10 Changed Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
Chlam_vir PF05475 Family 3 1 240.00 100 100.00 Changed Chlamydia virulence protein PGP3-D
ChlI PF13541 Domain 110 2468 111.60 31 23.32 Changed Subunit ChlI of Mg-chelatase
Chloroa_b-bind PF00504 Family 157 1982 135.40 26 63.73 Changed Chlorophyll A-B binding protein
Chlorophyllase PF07224 Family 4 70 206.30 28 71.71 Changed Chlorophyllase
Chlorophyllase2 PF12740 Family 28 296 172.10 19 46.72 Changed Chlorophyllase enzyme
Chloroplast_duf PF14476 Family 24 153 232.70 48 75.32 Changed Petal formation-expressed
Chlorosome_CsmC PF11098 Family 5 8 138.60 69 98.67 Changed Chlorosome envelope protein C
Chlorovi_GP_rpt PF06598 Repeat 36 17 35.50 74 22.55 Changed Chlorovirus glycoprotein repeat
Chlor_dismutase PF06778 Domain 133 353 192.70 33 72.27 Changed Chlorite dismutase
CHMI PF02962 Domain 1 137 120.90 30 93.69 Changed 5-carboxymethyl-2-hydroxymuconate isomerase
CholecysA-Rec_N PF09193 Domain 5 44 47.40 74 10.97 Changed Cholecystokinin A receptor, N-terminal
Choline_kinase PF01633 Family 33 1529 199.00 22 49.22 Changed Choline/ethanolamine kinase
Choline_kin_N PF04428 Family 20 157 66.50 36 9.53 Changed Choline kinase N terminus
Choline_sulf_C PF12411 Family 49 177 53.30 49 9.77 Changed Choline sulfatase enzyme C terminal
Choline_transpo PF04515 Family 325 1439 299.30 22 51.80 Changed Plasma-membrane choline transporter
Chol_subst-bind PF09129 Domain 14 26 295.30 46 55.58 Changed Cholesterol oxidase, substrate-binding
Chondroitinas_B PF14592 Family 10 135 263.20 29 45.80 Changed Chondroitinase B
Chon_Sulph_att PF06566 Domain 8 40 218.40 70 40.15 Changed Chondroitin sulphate attachment domain
CHORD PF04968 Family 217 811 61.10 47 36.80 Changed CHORD
Chordopox_A13L PF05961 Family 7 10 67.70 33 94.82 Changed Chordopoxvirus A13L protein
Chordopox_A15 PF05846 Family 6 9 91.40 40 96.71 Changed Chordopoxvirus A15 protein
Chordopox_A20R PF05941 Family 9 11 334.30 34 76.94 Changed Chordopoxvirus A20R protein
Chordopox_A30L PF06015 Family 7 11 70.60 44 96.88 Changed Chordopoxvirus A30L protein
Chordopox_A33R PF05966 Family 3 9 169.00 32 93.72 Changed Chordopoxvirus A33R protein
Chordopox_A35R PF05989 Family 7 9 161.10 34 92.71 Changed Chordopoxvirus A35R protein
Chordopox_E11 PF06138 Family 6 7 127.40 36 97.91 Changed Chordopoxvirus E11 protein
Chordopox_G2 PF05796 Family 9 11 217.00 38 95.48 Changed Chordopoxvirus protein G2
Chordopox_G3 PF06129 Family 10 12 107.10 35 97.87 Changed Chordopoxvirus G3 protein
Chordopox_L2 PF05803 Family 9 11 81.00 29 87.35 Changed Chordopoxvirus L2 protein
Chordopox_RPO7 PF05864 Family 6 11 63.00 71 100.00 Changed Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7)
Chorein_N PF12624 Family 229 1523 110.00 25 4.32 Changed N-terminal region of Chorein or VPS13
Chorion_1 PF01723 Family 5 57 129.60 27 84.32 Changed Chorion protein
Chorion_2 PF03964 Family 9 28 104.90 27 71.02 Changed Chorion family 2
Chorion_3 PF05387 Family 4 29 186.50 35 84.62 Changed Chorion family 3
Chorion_S16 PF05836 Family 5 12 100.40 69 76.41 Changed Chorion protein S16
Chorismate_bind PF00425 Family 119 3848 253.00 34 49.86 Changed chorismate binding enzyme
Chorismate_synt PF01264 Family 805 1890 339.20 42 92.39 Changed Chorismate synthase
Chor_lyase PF04345 Domain 3 220 168.20 29 92.11 Changed Chorismate lyase
ChpXY PF10216 Family 45 102 372.50 60 91.82 Changed CO2 hydration protein (ChpXY)
CHRD PF07452 Domain 209 474 121.10 22 37.94 Changed CHRD domain
Chromadorea_ALT PF05535 Family 11 45 70.50 43 42.50 Changed Chromadorea ALT protein
Chromate_transp PF02417 Family 1625 2605 171.20 25 83.06 Changed Chromate transporter
Chrome_Resist PF09828 Family 89 139 131.30 42 53.41 Changed Chromate resistance exported protein
Chromo PF00385 Domain 121 5932 53.70 26 6.54 Changed Chromo (CHRromatin Organisation MOdifier) domain
Chromosome_seg PF13889 Family 60 377 62.00 44 8.19 Changed Chromosome segregation during meiosis
Chromo_shadow PF01393 Domain 98 629 52.90 40 24.85 Changed Chromo shadow domain
Chs3p PF12271 Family 100 349 267.60 38 87.14 Changed Chitin synthase III catalytic subunit
CHS5_N PF16892 Domain 19 183 47.30 65 10.02 Changed Chitin biosynthesis protein CHS5 N-terminus
Churchill PF06573 Family 15 80 99.50 66 60.16 Changed Churchill protein
ChuX_HutX PF06228 Domain 121 191 131.10 23 56.65 Changed Haem utilisation ChuX/HutX
CHU_C PF13585 Domain 69 934 88.00 28 6.38 Changed C-terminal domain of CHU protein family
ChW PF07538 Repeat 441 675 35.10 43 22.94 Changed Clostridial hydrophobic W
CHZ PF09649 Domain 50 282 32.90 40 12.96 Changed Histone chaperone domain CHZ
CH_2 PF06294 Domain 181 455 94.40 30 15.16 Changed CH-like domain in sperm protein
CI-B14_5a PF07347 Family 41 132 92.00 40 71.99 Changed NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
CIA30 PF08547 Family 60 831 159.00 23 51.36 Changed Complex I intermediate-associated protein 30 (CIA30)
CIAPIN1 PF05093 Family 62 549 67.30 43 28.25 Changed Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
Cid2 PF09774 Family 85 287 140.50 30 78.78 Changed Caffeine-induced death protein 2
CIDE-N PF02017 Domain 98 414 73.60 38 24.12 Changed CIDE-N domain
CID_GANP PF16766 Family 16 67 70.20 54 3.82 Changed Binding region of GANP to ENY2
CIF PF16374 Family 2 3 132.30 38 43.29 Changed Cycle inhibiting factor (CIF)
cIII PF08134 Family 1 1 40.00 100 93.02 Changed cIII protein family
CIMR PF00878 Family 8 1375 136.80 25 78.46 Changed Cation-independent mannose-6-phosphate receptor repeat
CinA PF02464 Family 75 1680 153.30 35 57.92 Changed Competence-damaged protein
CiPC PF15800 Family 16 97 270.00 40 81.03 Changed Clock interacting protein circadian
Circo_capsid PF02443 Domain 12 2 206.50 16 72.58 Changed Circovirus capsid protein
Cir_Bir_Yir PF06022 Family 549 1261 244.60 31 81.64 Changed Plasmodium variant antigen protein Cir/Yir/Bir
Cir_N PF10197 Domain 157 778 37.30 36 9.94 Changed N-terminal domain of CBF1 interacting co-repressor CIR
CITED PF04487 Family 20 147 182.50 38 89.37 Changed CITED
CitF PF04223 Family 5 199 445.10 52 91.43 Changed Citrate lyase, alpha subunit (CitF)
CitG PF01874 Family 258 395 260.50 26 84.41 Changed ATP:dephospho-CoA triphosphoribosyl transferase
CitMHS PF03600 Family 649 3146 371.60 14 82.54 Changed Citrate transporter
CitMHS_2 PF16980 Family 53 164 429.20 47 93.09 Changed Putative citrate transport
Citrate_bind PF16114 Domain 44 470 170.70 60 24.68 Changed ATP citrate lyase citrate-binding
Citrate_ly_lig PF08218 Domain 12 166 178.70 42 47.86 Changed Citrate lyase ligase C-terminal domain
Citrate_synt PF00285 Domain 857 3545 325.80 29 72.20 Changed Citrate synthase, C-terminal domain
Citrus_P18 PF05520 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus P18 protein
CitT PF12431 Family 45 79 29.60 34 12.95 Changed Transcriptional regulator
CitX PF03802 Family 91 150 157.50 31 65.63 Changed Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CK1gamma_C PF12605 Family 22 311 62.80 52 17.40 Changed Casein kinase 1 gamma C terminal
CK2S PF15011 Family 36 146 145.90 28 67.40 Changed Casein Kinase 2 substrate
CKAP2_C PF15297 Family 17 199 197.90 29 48.20 Changed Cytoskeleton-associated protein 2 C-terminus
CKS PF01111 Domain 110 563 70.00 58 54.08 Changed Cyclin-dependent kinase regulatory subunit
CK_II_beta PF01214 Domain 194 968 183.40 48 68.42 Changed Casein kinase II regulatory subunit
CLAG PF03805 Family 8 45 625.40 27 76.15 Changed Cytoadherence-linked asexual protein
CLAMP PF14769 Family 69 246 96.10 26 34.75 Changed Flagellar C1a complex subunit C1a-32
CLASP_N PF12348 Family 52 1739 203.10 18 24.17 Changed CLASP N terminal
Class_IIIsignal PF04021 Motif 53 110 26.40 33 23.07 Changed Class III signal peptide
Clathrin PF00637 Family 128 5319 140.40 16 31.66 Changed Region in Clathrin and VPS
Clathrin-link PF09268 Domain 62 400 23.90 53 1.48 Changed Clathrin, heavy-chain linker
Clathrin_bdg PF15045 Family 27 145 72.20 45 10.73 Changed Clathrin-binding box of Aftiphilin, vesicle trafficking
Clathrin_H_link PF13838 Domain 74 602 64.80 54 4.31 Changed Clathrin-H-link
Clathrin_lg_ch PF01086 Family 94 620 204.40 24 85.08 Changed Clathrin light chain
Clathrin_propel PF01394 Repeat 49 1376 37.90 24 6.74 Changed Clathrin propeller repeat
Clat_adaptor_s PF01217 Domain 7 3705 136.10 25 50.28 Changed Clathrin adaptor complex small chain
Claudin_2 PF13903 Family 14 936 179.30 19 71.59 Changed PMP-22/EMP/MP20/Claudin tight junction
Claudin_3 PF06653 Family 24 108 160.80 18 89.00 Changed Tight junction protein, Claudin-like
Clavanin PF05452 Family 2 0 0.00 0 0.00 Changed Clavanin
Clc-like PF07062 Family 5 116 177.90 26 63.36 Changed Clc-like
CLCA PF08434 Family 30 474 549.10 26 86.63 Changed Calcium-activated chloride channel
Cleaved_Adhesin PF07675 Domain 4 104 143.80 17 19.40 Changed Cleaved Adhesin Domain
Clenterotox PF03505 Family 4 4 165.20 47 52.80 Changed Clostridium enterotoxin
CLIP PF12032 Domain 228 389 53.60 28 13.97 Changed Regulatory CLIP domain of proteinases
CLIP1_ZNF PF16641 Family 45 459 17.00 51 2.88 Changed CLIP1 zinc knuckle
CLLAC PF15675 Family 15 54 29.90 63 14.79 Changed CLLAC-motif containing domain
CLN3 PF02487 Family 96 510 309.30 31 81.33 Changed CLN3 protein
CLN5 PF15014 Family 11 77 280.50 61 84.21 Changed Ceroid-lipofuscinosis neuronal protein 5
CLN6 PF15156 Family 10 82 235.10 71 76.12 Changed Ceroid-lipofuscinosis neuronal protein 6
Cloacin PF03515 Family 6 6 255.70 24 51.37 Changed Colicin-like bacteriocin tRNase domain
Cloacin_immun PF03513 Family 5 10 79.70 42 70.78 Changed Cloacin immunity protein
Closter_coat PF01785 Family 11 7 183.00 15 57.91 Changed Closterovirus coat protein
Clostridium_P47 PF06597 Family 6 25 344.80 18 81.50 Changed Clostridium P-47 protein
Clp1 PF06807 Family 142 411 114.80 31 25.79 Changed Pre-mRNA cleavage complex II protein Clp1
CLP1_N PF16573 Family 160 434 93.80 37 20.77 Changed N-terminal beta-sandwich domain of polyadenylation factor
CLP1_P PF16575 Domain 90 973 176.40 23 33.61 Changed mRNA cleavage and polyadenylation factor CLP1 P-loop
ClpB_D2-small PF10431 Domain 573 7642 81.50 26 12.01 Changed C-terminal, D2-small domain, of ClpB protein
ClpS PF02617 Family 292 1389 76.60 27 13.79 Changed ATP-dependent Clp protease adaptor protein ClpS
CLPTM1 PF05602 Family 149 631 373.80 30 70.91 Changed Cleft lip and palate transmembrane protein 1 (CLPTM1)
Clp_N PF02861 Family 133 7677 50.60 23 11.62 Changed Clp amino terminal domain, pathogenicity island component
CLP_protease PF00574 Domain 68 3900 173.80 38 75.75 Changed Clp protease
Clr2 PF10383 Family 34 145 139.70 22 20.30 Changed Transcription-silencing protein Clr2
Clr2_transil PF16761 Family 77 153 68.70 35 10.65 Changed Transcription-silencing protein, cryptic loci regulator Clr2
Clr5 PF14420 Domain 296 615 54.40 27 9.60 Changed Clr5 domain
CLTH PF10607 Domain 122 1924 169.50 22 40.06 Changed CTLH/CRA C-terminal to LisH motif domain
CLU PF13236 Domain 121 509 220.50 37 16.98 Changed Clustered mitochondria
Cluap1 PF10234 Family 48 216 229.10 44 63.64 Changed Clusterin-associated protein-1
Clusterin PF01093 Family 51 185 342.10 36 90.66 Changed Clusterin
CLU_N PF15044 Family 48 451 74.50 36 5.64 Changed Mitochondrial function, CLU-N-term
CLZ PF16526 Domain 60 371 70.50 47 11.18 Changed C-terminal leucine zipper domain of cyclic nucleotide-gated channels
CM1 PF03026 Family 1 1 235.00 100 62.83 Changed Influenza C virus M1 protein
CM2 PF03021 Family 1 1 139.00 100 37.17 Changed Influenza C virus M2 protein
CMAS PF02353 Family 12 1885 256.30 30 60.87 Changed Mycolic acid cyclopropane synthetase
Cmc1 PF08583 Family 47 645 68.80 22 59.13 Changed Cytochrome c oxidase biogenesis protein Cmc1 like
CmcI PF04989 Family 15 89 193.90 36 71.10 Changed Cephalosporin hydroxylase
CMD PF02627 Family 180 4395 82.50 18 49.19 Changed Carboxymuconolactone decarboxylase family
CMS1 PF14617 Family 4 322 224.70 27 81.49 Changed U3-containing 90S pre-ribosomal complex subunit
CMV_1a PF12467 Family 2 2 166.00 33 16.98 Changed Cucumber mosaic virus 1a protein family
CMV_1a_C PF12503 Family 3 3 83.70 38 8.61 Changed Cucumber mosaic virus 1a protein C terminal
CMV_US PF08001 Family 3 4 214.80 21 93.98 Changed CMV US
Cmyb_C PF09316 Family 24 278 152.40 45 22.88 Changed C-myb, C-terminal
CM_1 PF07736 Domain 171 255 115.00 43 91.00 Changed Chorismate mutase type I
CM_2 PF01817 Domain 968 1865 77.20 25 28.71 Changed Chorismate mutase type II
Cm_res_leader PF08077 Family 1 1 17.00 100 100.00 Changed Chloramphenicol resistance gene leader peptide
Cna_B PF05738 Family 75 2355 71.50 22 15.41 Changed Cna protein B-type domain
Cnd1 PF12717 Family 182 834 159.70 26 14.49 Changed non-SMC mitotic condensation complex subunit 1
Cnd1_N PF12922 Domain 150 393 161.00 23 12.89 Changed non-SMC mitotic condensation complex subunit 1, N-term
Cnd2 PF05786 Family 55 628 492.20 20 90.31 Changed Condensin complex subunit 2
Cnd3 PF12719 Family 131 435 289.50 22 29.09 Changed Nuclear condensing complex subunits, C-term domain
CNDH2_C PF16858 Family 26 214 259.70 23 40.35 Changed Condensin II complex subunit CAP-H2 or CNDH2, C-term
CNDH2_M PF16869 Family 15 107 137.30 26 23.12 Changed PF16858
CNDH2_N PF06278 Family 33 179 105.70 43 17.37 Changed Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNF1 PF05785 Domain 3 4 278.00 27 25.77 Changed Rho-activating domain of cytotoxic necrotizing factor
CNH PF00780 Family 52 2351 264.20 18 23.56 Changed CNH domain
Cnl2_NKP2 PF09447 Family 53 112 65.10 45 33.70 Changed Cnl2/NKP2 family protein
cNMPbd_u2 PF16643 Disordered 28 98 150.70 35 15.49 Changed Unstructured region on cNMP-binding protein
cNMP_binding PF00027 Domain 221 15926 88.00 20 18.71 Changed Cyclic nucleotide-binding domain
Cnn_1N PF07989 Domain 95 524 72.80 36 5.46 Changed Centrosomin N-terminal motif 1
CNOT1_CAF1_bind PF16415 Domain 99 523 209.90 41 10.56 Changed CCR4-NOT transcription complex subunit 1 CAF1-binding domain
CNOT1_HEAT PF16418 Domain 142 441 147.50 27 7.04 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_HEAT_N PF16419 Domain 25 36 229.20 36 11.37 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_TTP_bind PF16417 Domain 34 492 174.80 33 8.58 Changed CCR4-NOT transcription complex subunit 1 TTP binding domain
CNP1 PF08750 Family 41 59 137.80 34 73.99 Changed CNP1-like family
CNPase PF05881 Family 12 77 208.10 50 48.40 Changed 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
CNRIP1 PF15043 Family 17 102 143.50 48 93.38 Changed CB1 cannabinoid receptor-interacting protein 1
CNTF PF01110 Domain 6 59 175.70 47 86.51 Changed Ciliary neurotrophic factor
CNV-Replicase_N PF16688 Domain 1 1 108.00 100 1.61 Changed Replicase polyprotein N-term from Coronavirus nsp1
CN_hydrolase PF00795 Family 52 8191 248.50 18 62.10 Changed Carbon-nitrogen hydrolase
Coa1 PF08695 Family 38 355 113.20 23 60.06 Changed Cytochrome oxidase complex assembly protein 1
COA2 PF17051 Family 2 33 68.10 30 80.98 Changed Cytochrome C oxidase assembly factor 2
CoaE PF01121 Domain 11 2154 174.90 31 73.27 Changed Dephospho-CoA kinase
Coagulase PF08764 Domain 10 5 263.00 21 48.67 Changed Staphylococcus aureus coagulase
Coagulin PF02035 Domain 2 0 0.00 0 0.00 Changed Coagulin
Coatamer_beta_C PF07718 Domain 97 463 138.40 51 15.09 Changed Coatomer beta C-terminal region
CoatB PF10389 Family 7 9 46.00 31 68.43 Changed Bacteriophage coat protein B
Coatomer_b_Cpla PF14806 Domain 56 470 126.30 58 14.09 Changed Coatomer beta subunit appendage platform
Coatomer_E PF04733 Family 7 536 244.10 28 79.57 Changed Coatomer epsilon subunit
Coatomer_g_Cpla PF16381 Domain 68 516 112.80 36 13.16 Changed Coatomer subunit gamma-1 C-terminal appendage platform
Coatomer_WDAD PF04053 Family 54 1148 392.30 31 41.48 Changed Coatomer WD associated region
Coat_F PF07875 Domain 240 443 62.60 23 49.70 Changed Coat F domain
Coat_X PF07552 Domain 31 41 57.80 33 72.18 Changed Spore Coat Protein X and V domain
CoA_binding PF02629 Domain 64 2864 96.80 31 25.80 Changed CoA binding domain
CoA_binding_2 PF13380 Domain 228 1934 122.70 25 25.27 Changed CoA binding domain
CoA_binding_3 PF13727 Domain 34 1578 172.40 15 32.07 Changed CoA-binding domain
CoA_trans PF01144 Domain 40 3261 208.30 26 78.43 Changed Coenzyme A transferase
CoA_transf_3 PF02515 Family 57 4163 332.70 28 82.36 Changed CoA-transferase family III
Cobalamin_bind PF01122 Family 48 204 271.50 29 65.71 Changed Eukaryotic cobalamin-binding protein
CobA_CobO_BtuR PF02572 Domain 499 1026 173.00 35 89.95 Changed ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CobD_Cbib PF03186 Family 547 936 283.70 31 89.35 Changed CobD/Cbib protein
Cobl PF09469 Domain 4 183 94.60 56 9.96 Changed Cordon-bleu ubiquitin-like domain
CobN-Mg_chel PF02514 Family 346 866 959.80 31 84.13 Changed CobN/Magnesium Chelatase
COBRA PF04833 Family 91 430 160.20 45 34.51 Changed COBRA-like protein
COBRA1 PF06209 Family 16 169 349.60 37 68.78 Changed Cofactor of BRCA1 (COBRA1)
CobS PF02654 Family 689 910 233.30 25 91.00 Changed Cobalamin-5-phosphate synthase
CobS_N PF12556 Family 52 132 33.70 48 10.18 Changed Cobaltochelatase CobS subunit N terminal
CobT PF06213 Family 63 163 271.30 25 44.32 Changed Cobalamin biosynthesis protein CobT
CobT_C PF11775 Domain 2 214 176.60 40 31.34 Changed Cobalamin biosynthesis protein CobT VWA domain
CobU PF02283 Domain 130 926 160.00 31 82.38 Changed Cobinamide kinase / cobinamide phosphate guanyltransferase
cobW PF02492 Domain 43 4401 176.30 25 53.92 Changed CobW/HypB/UreG, nucleotide-binding domain
CobW_C PF07683 Domain 152 2285 98.90 21 25.68 Changed Cobalamin synthesis protein cobW C-terminal domain
Cob_adeno_trans PF01923 Domain 605 1074 163.40 38 81.45 Changed Cobalamin adenosyltransferase
Codanin-1_C PF15296 Family 29 114 115.70 44 10.65 Changed Codanin-1 C-terminus
CodY PF06018 Domain 17 272 175.30 40 67.48 Changed CodY GAF-like domain
COE1_DBD PF16422 Domain 9 401 170.10 72 37.67 Changed Transcription factor COE1 DNA-binding domain
COE1_HLH PF16423 Domain 7 329 43.50 90 8.41 Changed Transcription factor COE1 helix-loop-helix domain
COesterase PF00135 Domain 61 8408 393.80 22 81.06 Changed Carboxylesterase family
Cofac_haem_bdg PF04187 Family 213 351 202.60 24 48.53 Changed Haem-binding uptake, Tiki superfamily, ChaN
CofC PF01983 Family 3 184 198.40 27 89.32 Changed Guanylyl transferase CofC like
Cofilin_ADF PF00241 Domain 492 2945 121.20 19 50.55 Changed Cofilin/tropomyosin-type actin-binding protein
COG2 PF06148 Family 17 391 131.60 28 22.91 Changed COG (conserved oligomeric Golgi) complex component, COG2
COG4 PF08318 Domain 134 463 287.90 27 39.22 Changed COG4 transport protein
COG5 PF10392 Family 16 364 127.10 27 20.35 Changed Golgi transport complex subunit 5
COG6 PF06419 Domain 114 471 509.80 25 85.24 Changed Conserved oligomeric complex COG6
COG7 PF10191 Family 7 320 491.50 21 87.70 Changed Golgi complex component 7 (COG7)
Cohesin PF00963 Domain 40 306 136.10 17 25.06 Changed Cohesin domain
Cohesin_HEAT PF12765 Family 47 553 38.90 32 2.38 Changed HEAT repeat associated with sister chromatid cohesion
Cohesin_load PF10345 Family 20 336 481.60 24 71.84 Changed Cohesin loading factor
CoiA PF06054 Family 4 196 225.30 21 65.90 Changed Competence protein CoiA-like family
Coiled PF05710 Coiled-coil 36 128 83.60 32 90.37 Changed Coiled coil
Coiled-coil_56 PF09813 Coiled-coil 3 183 81.10 29 67.09 Changed Coiled-coil domain-containing protein 56
Coilin_N PF15862 Family 41 146 171.00 23 31.99 Changed Coilin N-terminus
Coleoptericin PF06286 Family 3 2 141.00 99 100.00 Changed Coleoptericin
COLFI PF01410 Family 21 1360 181.40 37 15.63 Changed Fibrillar collagen C-terminal domain
Colicin PF01024 Domain 4 10 181.00 31 41.19 Changed Colicin pore forming domain
Colicin-DNase PF12639 Domain 22 47 95.30 24 16.72 Changed DNase/tRNase domain of colicin-like bacteriocin
Colicin_C PF12106 Domain 12 71 34.50 62 32.29 Changed Colicin C terminal ribonuclease domain
Colicin_D PF11429 Family 8 15 85.30 31 11.45 Changed Colicin D
Colicin_Ia PF11504 Family 3 0 0.00 0 0.00 Changed Colicin Ia
Colicin_im PF03857 Family 4 3 137.70 30 79.12 Changed Colicin immunity protein
Colicin_immun PF09204 Domain 8 23 82.00 27 53.60 Changed Bacterial self-protective colicin-like immunity
Colicin_M PF14859 Family 2 1 223.00 100 80.80 Changed Colicin M
Colicin_Pyocin PF01320 Domain 15 34 78.70 34 89.74 Changed Colicin immunity protein / pyocin immunity protein
Colicin_V PF02674 Family 129 1283 144.80 19 67.49 Changed Colicin V production protein
Colipase PF01114 Domain 7 56 39.00 63 35.80 Changed Colipase, N-terminal domain
Colipase-like PF15083 Family 6 73 72.90 39 82.55 Changed Colipase-like
Colipase_C PF02740 Domain 10 57 43.40 72 39.58 Changed Colipase, C-terminal domain
Collagen PF01391 Repeat 41 34939 62.80 40 31.29 Changed Collagen triple helix repeat (20 copies)
Collagen_bind PF05737 Domain 11 295 130.10 18 23.91 Changed Collagen binding domain
Collagen_bind_2 PF12904 Domain 48 121 90.30 27 17.21 Changed Putative collagen-binding domain of a collagenase
Collagen_mid PF15984 Domain 35 85 180.30 35 44.55 Changed Bacterial collagen, middle region
Collar PF07484 Domain 173 493 55.20 42 21.73 Changed Phage Tail Collar Domain
Collectrin PF16959 Family 43 130 140.40 53 29.07 Changed Renal amino acid transporter
Col_cuticle_N PF01484 Family 337 1399 49.00 22 15.50 Changed Nematode cuticle collagen N-terminal domain
ComA PF02679 Family 110 220 233.90 34 76.64 Changed (2R)-phospho-3-sulfolactate synthase (ComA)
ComC PF03047 Family 6 19 29.40 32 56.46 Changed COMC family
ComFB PF10719 Family 197 259 81.30 27 57.43 Changed Late competence development protein ComFB
ComGF PF15980 Domain 58 111 100.40 17 67.23 Changed Putative Competence protein ComGF
ComGG PF14173 Family 16 19 94.30 18 74.60 Changed ComG operon protein 7
ComJ PF11033 Family 8 17 120.50 27 77.55 Changed Competence protein J (ComJ)
ComK PF06338 Family 25 123 144.00 22 83.12 Changed ComK protein
Comm PF15957 Family 7 53 108.20 30 34.98 Changed Commissureless
Como_LCP PF02247 Domain 10 4 374.50 58 38.23 Changed Large coat protein
Como_SCP PF02248 Domain 10 4 172.20 60 17.59 Changed Small coat protein
COMP PF11598 Family 10 219 43.70 47 5.03 Changed Cartilage oligomeric matrix protein
COMPASS-Shg1 PF05205 Family 92 354 99.00 30 13.69 Changed COMPASS (Complex proteins associated with Set1p) component shg1
Competence PF03772 Family 83 1488 267.10 21 38.84 Changed Competence protein
CompInhib_SCIN PF11546 Family 4 4 112.50 30 87.04 Changed Staphylococcal complement inhibitor SCIN
Complex1_30kDa PF00329 Family 655 1846 122.10 32 40.70 Changed Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Complex1_49kDa PF00346 Family 294 2424 208.50 32 58.09 Changed Respiratory-chain NADH dehydrogenase, 49 Kd subunit
Complex1_51K PF01512 Family 98 2658 164.20 40 32.57 Changed Respiratory-chain NADH dehydrogenase 51 Kd subunit
Complex1_LYR PF05347 Family 176 2174 58.90 22 40.34 Changed Complex 1 protein (LYR family)
Complex1_LYR_1 PF13232 Domain 2 9 91.70 56 37.48 Changed Complex1_LYR-like
Complex1_LYR_2 PF13233 Family 225 659 95.00 20 67.40 Changed Complex1_LYR-like
ComP_DUS PF16732 Domain 118 221 92.30 25 63.92 Changed Type IV minor pilin ComP, DNA uptake sequence receptor
ComX PF05952 Family 3 11 51.00 26 49.65 Changed Bacillus competence pheromone ComX
ComZ PF10815 Family 9 15 55.00 59 83.50 Changed ComZ
Com_YlbF PF06133 Family 388 618 104.40 19 82.94 Changed Control of competence regulator ComK, YlbF/YmcA
Con-6 PF10346 Family 150 332 33.90 45 48.21 Changed Conidiation protein 6
Condensation PF00668 Family 22 10477 279.90 19 25.86 Changed Condensation domain
Condensin2nSMC PF12422 Family 50 184 138.30 37 13.69 Changed Condensin II non structural maintenance of chromosomes subunit
Connexin PF00029 Family 237 1419 217.60 41 68.68 Changed Connexin
Connexin40_C PF16791 Domain 22 72 110.30 48 30.03 Changed Connexin 40 C-terminal domain
Connexin43 PF03508 Family 3 54 19.90 94 5.31 Changed Gap junction alpha-1 protein (Cx43)
Connexin50 PF03509 Family 11 55 66.20 70 15.27 Changed Gap junction alpha-8 protein (Cx50)
Conotoxin PF02950 Domain 98 6 78.20 34 93.61 Changed Conotoxin
Consortin_C PF15281 Family 19 65 108.80 65 19.30 Changed Consortin C-terminus
Cons_hypoth698 PF03601 Family 13 954 299.50 27 84.71 Changed Conserved hypothetical protein 698
Cons_hypoth95 PF03602 Family 23 1784 172.20 28 82.39 Changed Conserved hypothetical protein 95
CooC_C PF15976 Family 18 38 93.30 26 10.94 Changed CS1-pili formation C-terminal
COOH-NH2_lig PF14395 Family 16 25 240.40 37 48.80 Changed Phage phiEco32-like COOH.NH2 ligase-type 2
COP-gamma_platf PF08752 Domain 154 547 144.70 42 16.92 Changed Coatomer gamma subunit appendage platform subdomain
COP23 PF14218 Family 100 150 141.60 23 64.93 Changed Circadian oscillating protein COP23
CopB PF05275 Family 113 196 206.70 37 64.49 Changed Copper resistance protein B precursor (CopB)
CopC PF04234 Domain 368 537 95.60 28 33.83 Changed CopC domain
CopD PF05425 Family 115 692 103.30 22 24.98 Changed Copper resistance protein D
CopG_antitoxin PF12441 Domain 16 102 74.60 26 84.37 Changed CopG antitoxin of type II toxin-antitoxin system
COPIIcoated_ERV PF07970 Family 185 1223 196.90 30 51.12 Changed Endoplasmic reticulum vesicle transporter
Copine PF07002 Family 15 1553 196.80 40 39.24 Changed Copine
COPI_assoc PF08507 Family 24 367 133.00 22 72.02 Changed COPI associated protein
COPI_C PF06957 Family 34 537 352.90 34 32.46 Changed Coatomer (COPI) alpha subunit C-terminus
CopK PF11525 Family 8 16 69.20 53 76.19 Changed Copper resistance protein K
Copper-bind PF00127 Domain 31 831 100.80 24 41.06 Changed Copper binding proteins, plastocyanin/azurin family
Copper-fist PF00649 Domain 65 325 38.70 54 8.36 Changed Copper fist DNA binding domain
COPR5 PF15340 Family 7 44 145.80 76 83.03 Changed Cooperator of PRMT5 family
Coprogen_oxidas PF01218 Family 293 1000 290.00 46 87.70 Changed Coproporphyrinogen III oxidase
Coq4 PF05019 Family 117 581 193.90 32 78.25 Changed Coenzyme Q (ubiquinone) biosynthesis protein Coq4
COQ7 PF03232 Domain 157 588 162.90 35 73.81 Changed Ubiquinone biosynthesis protein COQ7
COQ9 PF08511 Domain 173 412 75.50 37 26.89 Changed COQ9
COR PF16095 Family 47 640 212.80 17 14.70 Changed C-terminal of Roc, COR, domain
Cor1 PF04803 Family 40 194 114.60 36 48.30 Changed Cor1/Xlr/Xmr conserved region
CorA PF01544 Family 59 4001 250.00 15 53.46 Changed CorA-like Mg2+ transporter protein
CorC_HlyC PF03471 Domain 144 3550 81.10 23 19.07 Changed Transporter associated domain
Cornichon PF03311 Family 125 747 118.20 38 80.06 Changed Cornichon protein
Cornifin PF02389 Family 3 154 93.50 42 55.30 Changed Cornifin (SPRR) family
Coronavirus_5 PF05528 Family 1 1 82.00 100 100.00 Changed Coronavirus gene 5 protein
Corona_3 PF04694 Family 1 1 59.00 100 83.10 Changed Coronavirus ORF3 protein
Corona_5a PF06336 Family 1 1 64.00 100 98.46 Changed Coronavirus 5a protein
Corona_6B_7B PF03262 Family 1 1 206.00 100 100.00 Changed Coronavirus 6B/7B protein
Corona_7 PF02398 Family 1 1 101.00 100 100.00 Changed Coronavirus protein 7
Corona_I PF03187 Family 1 1 207.00 100 100.00 Changed Corona nucleocapsid I protein
Corona_M PF01635 Family 4 6 219.00 30 95.36 Changed Coronavirus M matrix/glycoprotein
Corona_NS1 PF06145 Family 2 0 0.00 0 0.00 Changed Coronavirus nonstructural protein NS1
Corona_NS2 PF04753 Family 1 1 105.00 100 93.75 Changed Coronavirus non-structural protein NS2
Corona_NS2A PF05213 Family 2 4 200.80 33 6.54 Changed Coronavirus NS2A protein
Corona_NS3b PF03053 Family 4 2 110.50 0 100.00 Changed ORF3b coronavirus protein
Corona_NS4 PF03905 Family 3 1 45.00 100 35.16 Changed Coronavirus non-structural protein NS4
Corona_NS8 PF12093 Family 2 2 58.00 0 94.31 Changed Coronavirus NS8 protein
Corona_NSP4_C PF16348 Domain 5 10 95.90 46 1.67 Changed Coronavirus nonstructural protein 4 C-terminus
Corona_nucleoca PF00937 Family 3 7 295.60 25 86.42 Changed Coronavirus nucleocapsid protein
Corona_RPol_N PF06478 Family 6 6 352.30 52 5.20 Changed Coronavirus RPol N-terminus
Corona_S1 PF01600 Family 3 4 508.00 26 40.81 Changed Coronavirus S1 glycoprotein
Corona_S2 PF01601 Family 4 6 620.20 39 49.23 Changed Coronavirus S2 glycoprotein
CortBP2 PF09727 Family 43 383 157.40 42 17.39 Changed Cortactin-binding protein-2
Cortex-I_coil PF09304 Coiled-coil 3 9 105.70 52 18.63 Changed Cortexillin I, coiled coil
Cortexin PF11057 Family 7 132 74.10 57 90.17 Changed Cortexin of kidney
Costars PF14705 Domain 76 293 76.10 46 35.59 Changed Costars
CotE PF10628 Family 48 97 172.80 38 94.87 Changed Outer spore coat protein E (CotE)
CotH PF08757 Family 39 484 314.70 15 49.90 Changed CotH protein
CotJA PF11007 Family 173 240 35.10 40 38.93 Changed Spore coat associated protein JA (CotJA)
CotJB PF12652 Domain 248 305 76.30 35 75.44 Changed CotJB protein
Couple_hipA PF13657 Domain 107 750 102.90 22 27.22 Changed HipA N-terminal domain
COX1 PF00115 Family 725 2766 421.10 29 74.64 Changed Cytochrome C and Quinol oxidase polypeptide I
COX14 PF14880 Family 37 211 57.50 23 31.75 Changed Cytochrome oxidase c assembly
COX15-CtaA PF02628 Family 67 1263 274.20 25 79.04 Changed Cytochrome oxidase assembly protein
COX16 PF14138 Family 107 342 78.90 34 56.53 Changed Cytochrome c oxidase assembly protein COX16
COX17 PF05051 Family 104 364 46.60 50 55.85 Changed Cytochrome C oxidase copper chaperone (COX17)
COX2 PF00116 Domain 12 1567 100.10 30 32.64 Changed Cytochrome C oxidase subunit II, periplasmic domain
COX2-transmemb PF09125 Domain 1 4 37.00 46 23.64 Changed Cytochrome C oxidase subunit II, transmembrane
COX2_TM PF02790 Family 11 909 84.50 24 27.23 Changed Cytochrome C oxidase subunit II, transmembrane domain
COX3 PF00510 Family 8 1754 194.70 26 82.77 Changed Cytochrome c oxidase subunit III
COX4 PF02936 Family 99 436 128.90 29 74.49 Changed Cytochrome c oxidase subunit IV
COX4_pro PF03626 Family 408 650 74.40 23 66.42 Changed Prokaryotic Cytochrome C oxidase subunit IV
COX4_pro_2 PF07835 Domain 38 80 41.90 31 64.91 Changed Bacterial aa3 type cytochrome c oxidase subunit IV
COX5A PF02284 Domain 59 347 99.40 52 66.01 Changed Cytochrome c oxidase subunit Va
COX5B PF01215 Domain 23 485 114.80 33 65.76 Changed Cytochrome c oxidase subunit Vb
COX6A PF02046 Family 48 411 98.10 35 77.46 Changed Cytochrome c oxidase subunit VIa
COX6B PF02297 Domain 57 844 66.90 31 57.23 Changed Cytochrome oxidase c subunit VIb
COX6C PF02937 Family 47 153 68.10 40 70.13 Changed Cytochrome c oxidase subunit VIc
COX7a PF02238 Family 87 413 51.80 30 56.68 Changed Cytochrome c oxidase subunit VII
COX7B PF05392 Family 19 72 75.20 66 93.20 Changed Cytochrome C oxidase chain VIIB
COX7C PF02935 Family 83 290 64.70 34 68.09 Changed Cytochrome c oxidase subunit VIIc
COX8 PF02285 Family 36 104 41.90 38 53.42 Changed Cytochrome oxidase c subunit VIII
COXG PF06240 Family 12 374 139.90 24 54.60 Changed Carbon monoxide dehydrogenase subunit G (CoxG)
CoxIIa PF08113 Family 4 15 32.90 37 68.99 Changed Cytochrome c oxidase subunit IIa family
COX_ARM PF06481 Motif 141 261 45.90 33 14.13 Changed COX Aromatic Rich Motif
Co_AT_N PF12557 Family 96 214 25.50 35 12.15 Changed Cob(I)alamin adenosyltransferase N terminal
CO_deh_flav_C PF03450 Domain 112 2098 102.00 23 14.14 Changed CO dehydrogenase flavoprotein C-terminal domain
CO_dh PF02552 Family 6 63 162.00 26 70.16 Changed CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
CP12 PF02672 Family 99 278 63.10 38 38.50 Changed CP12 domain
CP2 PF04516 Family 12 776 204.10 37 36.33 Changed CP2 transcription factor
CpcD PF01383 Domain 116 284 54.30 37 24.33 Changed CpcD/allophycocyanin linker domain
CPDase PF07823 Domain 7 139 189.50 22 87.74 Changed Cyclic phosphodiesterase-like protein
CpeS PF09367 Domain 49 180 163.30 31 89.88 Changed CpeS-like protein
CpeT PF06206 Family 72 182 175.60 31 79.50 Changed CpeT/CpcT family (DUF1001)
CPG4 PF15481 Family 20 61 90.60 23 25.29 Changed Chondroitin proteoglycan 4
CPL PF08144 Domain 64 376 136.80 26 21.20 Changed CPL (NUC119) domain
Cpl-7 PF08230 Domain 34 81 38.50 53 18.88 Changed Cpl-7 lysozyme C-terminal domain
Cpn10 PF00166 Domain 39 2703 91.00 41 86.02 Changed Chaperonin 10 Kd subunit
Cpn60_TCP1 PF00118 Family 57 8693 430.50 26 73.11 Changed TCP-1/cpn60 chaperonin family
CppA_C PF14507 Family 15 38 107.30 30 41.44 Changed CppA C-terminal
CppA_N PF14506 Family 5 32 120.70 35 47.28 Changed CppA N-terminal
CPSase_L_D2 PF02786 Domain 16 9834 202.50 31 26.66 Changed Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D3 PF02787 Domain 1114 2379 121.30 38 9.89 Changed Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPSase_sm_chain PF00988 Domain 758 2256 131.40 46 19.46 Changed Carbamoyl-phosphate synthase small chain, CPSase domain
CPSF100_C PF13299 Family 109 391 146.90 30 18.04 Changed Cleavage and polyadenylation factor 2 C-terminal
CPSF73-100_C PF11718 Domain 163 449 230.60 28 31.99 Changed Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
CPSF_A PF03178 Family 65 1475 294.50 22 26.04 Changed CPSF A subunit region
CPT PF07931 Domain 7 112 158.70 24 81.98 Changed Chloramphenicol phosphotransferase-like protein
Cpta_toxin PF07254 Family 14 49 122.40 36 93.91 Changed Membrane-bound toxin component of toxin-antitoxin system
CPT_N PF16484 Domain 31 249 46.90 61 6.52 Changed Carnitine O-palmitoyltransferase N-terminus
CPW_WPC PF09717 Domain 164 335 60.10 28 49.32 Changed Plasmodium falciparum domain of unknown function (CPW_WPC)
CpxA_peri PF16527 Domain 10 63 117.80 39 25.71 Changed Two-component sensor protein CpxA, periplasmic domain
CpXC PF14353 Family 51 78 125.70 22 51.13 Changed CpXC protein
CP_ATPgrasp_1 PF04174 Family 9 27 278.30 48 54.13 Changed A circularly permuted ATPgrasp
CP_ATPgrasp_2 PF14403 Family 346 627 374.60 42 62.11 Changed Circularly permuted ATP-grasp type 2
CR6_interact PF10147 Family 8 112 187.40 31 82.52 Changed Growth arrest and DNA-damage-inducible proteins-interacting protein 1
CRA PF06589 Family 3 9 124.80 45 95.66 Changed Circumsporozoite-related antigen (CRA)
CRAL_TRIO PF00650 Domain 104 5398 152.40 19 33.28 Changed CRAL/TRIO domain
CRAL_TRIO_2 PF13716 Domain 63 1483 132.10 23 14.22 Changed Divergent CRAL/TRIO domain
CRAL_TRIO_N PF03765 Domain 261 2349 60.90 24 13.96 Changed CRAL/TRIO, N-terminal domain
CRAM_rpt PF07016 Repeat 2 81 21.90 91 143.28 Changed Cysteine-rich acidic integral membrane protein precursor
CRA_rpt PF07046 Repeat 5 81 40.80 84 90.18 Changed Cytoplasmic repetitive antigen (CRA) like repeat
CRCB PF02537 Family 977 2088 116.20 27 74.05 Changed CrcB-like protein, Camphor Resistance (CrcB)
CRC_subunit PF08624 Family 73 327 131.60 51 23.57 Changed Chromatin remodelling complex Rsc7/Swp82 subunit
CreA PF05981 Family 82 244 128.50 46 73.67 Changed CreA protein
Creatinase_N PF01321 Domain 102 3045 134.90 18 28.81 Changed Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 Domain 685 1188 162.30 30 26.38 Changed Creatinase/Prolidase N-terminal domain
Creatininase PF02633 Family 453 797 232.30 25 89.85 Changed Creatinine amidohydrolase
Creb_binding PF09030 Domain 37 181 111.20 51 5.03 Changed Creb binding
CreD PF06123 Family 88 132 415.30 32 94.08 Changed Inner membrane protein CreD
Cren7 PF11520 Family 8 28 56.80 51 91.91 Changed Chromatin protein Cren7
CREPT PF16566 Domain 33 312 135.80 37 25.01 Changed Cell-cycle alteration and expression-elevated protein in tumour
CReP_N PF10472 Domain 11 40 348.50 57 53.51 Changed eIF2-alpha phosphatase phosphorylation constitutive repressor
CRF PF00473 Family 26 197 38.20 42 19.47 Changed Corticotropin-releasing factor family
CRF-BP PF05428 Family 16 103 274.30 46 89.83 Changed Corticotropin-releasing factor binding protein (CRF-BP)
CRF1 PF10380 Family 14 45 123.00 39 15.47 Changed Transcription factor CRF1
CRIC_ras_sig PF10534 Domain 38 298 90.40 46 11.17 Changed Connector enhancer of kinase suppressor of ras
CRIM PF16978 Family 103 335 142.10 31 20.06 Changed SAPK-interacting protein 1 (Sin1), middle CRIM domain
Crinivirus_P26 PF07416 Family 1 1 227.00 100 100.00 Changed Crinivirus P26 protein
Cript PF10235 Family 52 264 89.00 43 72.75 Changed Microtubule-associated protein CRIPT
Crisp PF08562 Domain 74 150 55.70 47 22.92 Changed Crisp
CRISPR_assoc PF08798 Domain 114 180 218.60 24 97.26 Changed CRISPR associated protein
CRISPR_Cas2 PF09827 Family 427 920 76.30 26 78.60 Changed CRISPR associated protein Cas2
CRISPR_Cse1 PF09481 Family 109 165 470.30 20 85.79 Changed CRISPR-associated protein Cse1 (CRISPR_cse1)
CRISPR_Cse2 PF09485 Family 104 162 148.00 21 72.38 Changed CRISPR-associated protein Cse2 (CRISPR_cse2)
Crl PF07417 Family 25 61 117.60 48 90.59 Changed Transcriptional regulator Crl
CRM1_C PF08767 Domain 25 592 286.50 35 28.69 Changed CRM1 C terminal
Cro PF09048 Domain 6 14 58.40 49 86.38 Changed Cro
Crp PF00325 Domain 12 228 31.20 56 14.30 Changed Bacterial regulatory proteins, crp family
CRPA PF05745 Family 5 2 103.50 46 84.15 Changed Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
CRPV_capsid PF08762 Domain 7 5 217.80 16 12.93 Changed CRPV capsid protein like
CRS1_YhbY PF01985 Domain 594 1884 83.70 25 40.44 Changed CRS1 / YhbY (CRM) domain
CRT-like PF08627 Family 11 242 259.30 24 65.33 Changed CRT-like, chloroquine-resistance transporter-like
CRT10 PF08728 Family 9 179 313.20 14 54.05 Changed CRT10
CrtC PF07143 Domain 145 227 172.70 28 43.72 Changed CrtC N-terminal lipocalin domain
Crust_neurohorm PF01147 Family 14 70 61.60 37 53.50 Changed Crustacean CHH/MIH/GIH neurohormone family
Crust_neuro_H PF03858 Family 8 0 0.00 0 0.00 Changed Crustacean neurohormone H
CryBP1 PF07029 Family 2 7 155.90 23 59.07 Changed CryBP1 protein
Cryptochrome_C PF12546 Family 20 59 118.20 47 18.08 Changed Blue/Ultraviolet sensing protein C terminal
Crystall PF00030 Domain 100 3516 81.10 32 55.82 Changed Beta/Gamma crystallin
Crystallin PF00525 Family 13 186 53.90 50 31.41 Changed Alpha crystallin A chain, N terminal
Crystall_2 PF09076 Domain 7 12 70.70 43 64.29 Changed Beta/Gamma crystallin
Crystall_3 PF08964 Domain 10 25 85.00 25 33.88 Changed Beta/Gamma crystallin
CS PF04969 Domain 73 2828 77.40 20 22.33 Changed CS domain
CsbD PF05532 Domain 92 939 52.90 31 69.32 Changed CsbD-like
CSD PF00313 Domain 34 5812 65.20 38 50.38 Changed 'Cold-shock' DNA-binding domain
Cse1 PF08506 Domain 15 875 293.70 24 31.71 Changed Cse1
CSF-1 PF05337 Domain 5 65 131.00 58 30.10 Changed Macrophage colony stimulating factor-1 (CSF-1)
CSG2 PF16965 Family 12 55 311.50 28 79.44 Changed Ceramide synthase regulator
CsgE PF10627 Family 20 54 102.10 28 67.68 Changed Curli assembly protein CsgE
CsgF PF10614 Family 13 62 124.60 32 91.56 Changed Type VIII secretion system (T8SS), CsgF protein
CsgG PF03783 Family 18 322 180.60 20 57.49 Changed Curli production assembly/transport component CsgG
CsiD PF08943 Domain 16 34 283.60 50 89.59 Changed CsiD
CsiV PF10972 Family 23 96 209.30 19 90.22 Changed Peptidoglycan-binding protein, CsiV
Csm1 PF12539 Family 74 167 90.50 38 21.87 Changed Chromosome segregation protein Csm1/Pcs1
CSM2 PF16834 Domain 13 26 184.80 37 93.23 Changed Shu complex component Csm2, DNA-binding
CSN8_PSD8_EIF3K PF10075 Family 33 1092 139.80 21 54.99 Changed CSN8/PSMD8/EIF3K family
CsoS2_M PF12288 Family 11 53 286.20 29 67.43 Changed Carboxysome shell peptide mid-region
CsoSCA PF08936 Domain 25 34 415.40 41 83.93 Changed Carboxysome Shell Carbonic Anhydrase
CsrA PF02599 Family 281 673 52.80 48 70.08 Changed Global regulator protein family
CSRNP_N PF16019 Family 33 296 191.60 51 36.80 Changed Cysteine/serine-rich nuclear protein N-terminus
CSS-motif PF12792 Domain 83 202 191.80 15 38.27 Changed CSS motif domain associated with EAL
CssAB PF16831 Domain 1 0 0.00 0 0.00 Changed CS6 fimbrial subunits A and B, Coli surface antigen 6
CST-I PF06002 Family 3 11 262.50 35 93.49 Changed Alpha-2,3-sialyltransferase (CST-I)
CstA PF02554 Family 53 1119 280.50 31 60.95 Changed Carbon starvation protein CstA
CstA_5TM PF13722 Domain 225 871 122.40 32 20.76 Changed 5TM C-terminal transporter carbon starvation CstA
CSTF1_dimer PF16699 Domain 29 153 56.50 50 14.06 Changed Cleavage stimulation factor subunit 1, dimerisation domain
CSTF2_hinge PF14327 Family 108 573 78.10 35 18.82 Changed Hinge domain of cleavage stimulation factor subunit 2
CSTF_C PF14304 Domain 22 494 39.60 43 9.48 Changed Transcription termination and cleavage factor C-terminal
CT47 PF15623 Family 11 43 245.80 47 90.81 Changed Cancer/testis gene family 47
CtaG_Cox11 PF04442 Family 235 664 145.20 45 62.15 Changed Cytochrome c oxidase assembly protein CtaG/Cox11
CTC1 PF15489 Family 11 104 667.90 35 87.94 Changed CST, telomere maintenance, complex subunit CTC1
CTC1_2 PF15491 Family 11 49 284.80 45 27.45 Changed CST, telomere maintenance, complex subunit CTC1
CTD PF12815 Domain 27 273 80.20 37 12.27 Changed Spt5 C-terminal nonapeptide repeat binding Spt4
CTD_bind PF04818 Family 288 1714 63.40 26 8.38 Changed RNA polymerase II-binding domain.
Ctf8 PF09696 Family 67 335 104.40 28 70.50 Changed Ctf8
CTF_NFI PF00859 Family 14 397 241.60 50 56.20 Changed CTF/NF-I family transcription modulation region
CTI PF06934 Family 46 64 655.90 42 88.13 Changed Fatty acid cis/trans isomerase (CTI)
CtIP_N PF10482 Domain 22 132 112.70 62 16.56 Changed Tumour-suppressor protein CtIP N-terminal domain
CTK3 PF12243 Domain 7 172 122.90 44 40.58 Changed CTD kinase subunit gamma CTK3
CTK3_C PF12350 Domain 63 189 70.90 41 23.30 Changed CTD kinase subunit gamma CTK3 C-terminus
CtkA_N PF16948 Domain 21 34 86.80 40 31.89 Changed Cell translocating kinase A N-terminus
CtnDOT_TraJ PF07863 Family 13 99 62.10 43 18.93 Changed Homologues of TraJ from Bacteroides conjugative transposon
CTNNB1_binding PF08347 Family 23 427 159.70 42 40.33 Changed N-terminal CTNNB1 binding
CTNNBL PF08216 Domain 109 365 100.90 41 18.33 Changed Catenin-beta-like, Arm-motif containing nuclear
CTP-dep_RFKase PF01982 Family 97 121 121.20 39 59.95 Changed Domain of unknown function DUF120
CTP_synth_N PF06418 Domain 483 2355 255.70 55 47.21 Changed CTP synthase N-terminus
CTP_transf_1 PF01148 Family 36 2460 271.60 24 84.84 Changed Cytidylyltransferase family
CTP_transf_3 PF02348 Family 13 1620 213.60 23 78.68 Changed Cytidylyltransferase
CTP_transf_like PF01467 Domain 65 7116 144.90 18 56.58 Changed Cytidylyltransferase-like
Ctr PF04145 Family 450 1319 132.80 23 64.64 Changed Ctr copper transporter family
CtsR PF05848 Family 169 265 147.80 41 95.63 Changed Firmicute transcriptional repressor of class III stress genes (CtsR)
CTU2 PF10288 Family 110 310 104.00 25 23.51 Changed Cytoplasmic tRNA 2-thiolation protein 2
CTV_P13 PF06922 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus P13 protein
CTV_P23 PF04808 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus (CTV) P23 protein
CTV_P33 PF07184 Family 2 0 0.00 0 0.00 Changed Citrus tristeza virus P33 protein
CTV_P6 PF06706 Family 2 0 0.00 0 0.00 Changed Citrus tristeza virus 6-kDa protein
CTXphi_pIII-N1 PF16710 Domain 1 1 111.00 100 28.10 Changed N-terminal N1 domain of Vibrio phage CTXphi pIII
CTX_RstB PF07459 Family 1 8 103.40 30 95.28 Changed CTX phage RstB protein
Cu-binding_MopE PF11617 Repeat 55 205 25.00 38 9.49 Changed Putative metal-binding motif
Cu-oxidase PF00394 Domain 72 4225 150.40 20 25.66 Changed Multicopper oxidase
Cu-oxidase_2 PF07731 Domain 127 5267 134.10 21 22.86 Changed Multicopper oxidase
Cu-oxidase_3 PF07732 Domain 88 5780 112.00 28 20.07 Changed Multicopper oxidase
Cu-oxidase_4 PF02578 Family 721 1312 226.10 30 86.11 Changed Multi-copper polyphenol oxidoreductase laccase
Cu2_monooxygen PF01082 Domain 143 556 121.80 30 20.18 Changed Copper type II ascorbate-dependent monooxygenase, N-terminal domain
Cu2_monoox_C PF03712 Domain 69 605 143.80 29 24.57 Changed Copper type II ascorbate-dependent monooxygenase, C-terminal domain
CUB PF00431 Domain 24 14632 107.60 25 31.99 Changed CUB domain
CUB_2 PF02408 Domain 24 269 113.70 20 26.11 Changed CUB-like domain
Cucumo_2B PF03263 Family 1 1 105.00 100 95.45 Changed Cucumovirus protein 2B
Cucumo_coat PF00760 Domain 1 1 205.00 100 94.04 Changed Cucumovirus coat protein
CUE PF02845 Family 123 1958 41.10 24 7.69 Changed CUE domain
Cul7 PF11515 Family 27 217 74.80 53 2.58 Changed Mouse development and cellular proliferation protein Cullin-7
Cullin PF00888 Family 418 2903 473.80 22 65.97 Changed Cullin family
Cullin_binding PF03556 Family 211 929 112.30 35 42.64 Changed Cullin binding
Cullin_Nedd8 PF10557 Domain 412 1935 62.60 44 7.59 Changed Cullin protein neddylation domain
Cupin_1 PF00190 Domain 65 3544 138.70 22 62.66 Changed Cupin
Cupin_2 PF07883 Domain 156 8307 70.80 19 40.13 Changed Cupin domain
Cupin_3 PF05899 Domain 32 701 74.20 26 53.80 Changed Protein of unknown function (DUF861)
Cupin_4 PF08007 Family 26 766 272.50 21 50.34 Changed Cupin superfamily protein
Cupin_5 PF06172 Domain 326 563 140.20 34 77.94 Changed Cupin superfamily (DUF985)
Cupin_6 PF12852 Domain 99 612 177.60 22 57.58 Changed Cupin
Cupin_7 PF12973 Domain 46 513 89.90 25 55.34 Changed ChrR Cupin-like domain
Cupin_8 PF13621 Domain 54 2517 239.90 18 50.23 Changed Cupin-like domain
Cupredoxin_1 PF13473 Domain 61 759 108.70 18 39.91 Changed Cupredoxin-like domain
Curlin_rpt PF07012 Repeat 96 370 34.20 32 36.48 Changed Curlin associated repeat
Curto_V2 PF07325 Family 2 2 111.50 65 100.00 Changed Curtovirus V2 protein
Curto_V3 PF07436 Family 1 2 86.50 69 97.74 Changed Curtovirus V3 protein
CusF_Ec PF11604 Family 249 403 66.40 30 26.81 Changed Copper binding periplasmic protein CusF
CUT PF02376 Domain 43 1299 78.00 39 18.32 Changed CUT domain
Cut12 PF11500 Domain 35 105 147.30 34 21.09 Changed Spindle pole body formation-associated protein
Cut8 PF08559 Family 88 237 229.60 27 66.85 Changed Cut8, nuclear proteasome tether protein
CutA1 PF03091 Family 496 809 95.80 35 73.71 Changed CutA1 divalent ion tolerance protein
CutC PF03932 Domain 8 748 196.10 36 78.25 Changed CutC family
Cuticle_1 PF08140 Family 38 0 0.00 0 0.00 Changed Crustacean cuticle protein repeat
Cuticle_2 PF08184 Family 3 0 0.00 0 0.00 Changed Cuticle protein 7 isoform family
Cuticle_3 PF11018 Family 7 123 110.30 30 59.81 Changed Pupal cuticle protein C1
Cuticle_4 PF15955 Family 31 115 85.60 41 58.13 Changed Cuticle protein
Cutinase PF01083 Domain 15 1082 184.90 24 67.12 Changed Cutinase
CUTL PF16557 Domain 5 160 71.20 85 10.14 Changed CUT1-like DNA-binding domain of SATB
Cu_amine_oxid PF01179 Domain 334 1441 358.70 31 56.70 Changed Copper amine oxidase, enzyme domain
Cu_amine_oxidN1 PF07833 Domain 118 1859 86.40 20 24.70 Changed Copper amine oxidase N-terminal domain
Cu_amine_oxidN2 PF02727 Domain 9 904 88.00 25 12.62 Changed Copper amine oxidase, N2 domain
Cu_amine_oxidN3 PF02728 Domain 12 822 100.00 22 14.30 Changed Copper amine oxidase, N3 domain
Cu_bind_like PF02298 Domain 15 1985 82.10 31 45.07 Changed Plastocyanin-like domain
CVNH PF08881 Domain 136 431 105.60 22 54.10 Changed CVNH domain
CWC25 PF12542 Family 127 390 92.80 33 22.15 Changed Pre-mRNA splicing factor
cwf18 PF08315 Family 151 382 131.90 34 69.60 Changed cwf18 pre-mRNA splicing factor
cwf21 PF08312 Domain 177 639 46.50 39 6.97 Changed cwf21 domain
CwfJ_C_1 PF04677 Family 8 758 126.30 29 20.58 Changed Protein similar to CwfJ C-terminus 1
CwfJ_C_2 PF04676 Family 164 728 99.40 25 16.26 Changed Protein similar to CwfJ C-terminus 2
Cwf_Cwc_15 PF04889 Family 107 485 198.70 38 94.27 Changed Cwf15/Cwc15 cell cycle control protein
CW_binding_1 PF01473 Repeat 211 4303 18.60 39 14.99 Changed Putative cell wall binding repeat
CW_binding_2 PF04122 Repeat 976 1488 89.90 27 33.78 Changed Putative cell wall binding repeat 2
CX PF01705 Family 66 147 58.40 29 24.25 Changed CX module
CX9C PF16860 Domain 39 152 43.50 31 41.15 Changed CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
CXCL17 PF15211 Family 12 32 81.00 67 73.87 Changed VEGF co-regulated chemokine 1
CXCR4_N PF12109 Domain 8 51 33.10 71 9.48 Changed CXCR4 Chemokine receptor N terminal
CXCXC PF03128 Repeat 39 222 12.70 53 7.34 Changed CXCXC repeat
CxxCxxCC PF03692 Family 35 1646 97.20 21 54.22 Changed Putative zinc- or iron-chelating domain
Cyanate_lyase PF02560 Domain 76 377 68.60 54 43.75 Changed Cyanate lyase C-terminal domain
CybS PF05328 Family 35 398 126.00 33 73.07 Changed CybS, succinate dehydrogenase cytochrome B small subunit
Cyc-maltodext_C PF10438 Domain 99 129 76.70 31 12.79 Changed Cyclo-malto-dextrinase C-terminal domain
Cyc-maltodext_N PF09087 Domain 91 131 86.10 36 13.82 Changed Cyclomaltodextrinase, N-terminal
Cyclase PF04199 Family 444 1737 176.70 19 64.07 Changed Putative cyclase
Cyclase_polyket PF04673 Domain 41 68 102.60 46 88.67 Changed Polyketide synthesis cyclase
Cyclin PF08613 Family 6 1699 145.90 24 37.75 Changed Cyclin
Cyclin_C PF02984 Domain 239 3657 116.30 19 27.77 Changed Cyclin, C-terminal domain
Cyclin_C_2 PF16899 Domain 106 492 112.20 25 31.95 Changed Cyclin C-terminal domain
Cyclin_N PF00134 Domain 95 7549 124.50 20 30.90 Changed Cyclin, N-terminal domain
Cyclin_N2 PF16500 Family 16 76 129.10 41 30.30 Changed N-terminal region of cyclin_N
Cyclophil_like PF04126 Family 13 136 114.90 23 70.74 Changed Cyclophilin-like
Cyclotide PF03784 Domain 30 6 29.30 51 35.77 Changed Cyclotide family
Cyd_oper_YbgE PF09600 Family 43 79 78.80 37 80.99 Changed Cyd operon protein YbgE (Cyd_oper_YbgE)
CYLD_phos_site PF16607 Disordered 7 69 153.10 68 17.21 Changed Phosphorylation region of CYLD, unstructured
Cylicin_N PF15241 Family 26 75 104.70 52 22.59 Changed Cylicin N-terminus
CymA PF16941 Family 2 2 342.50 60 99.71 Changed Putative cyclodextrin porin
Cypo_polyhedrin PF05865 Family 1 1 248.00 100 100.00 Changed Cypovirus polyhedrin protein
CysG_dimeriser PF10414 Domain 191 354 57.10 28 13.55 Changed Sirohaem synthase dimerisation region
Cystatin PF00031 Domain 35 1473 90.30 18 49.78 Changed Cystatin domain
CYSTM PF12734 Family 47 426 52.10 33 56.43 Changed Cysteine-rich TM module stress tolerance
Cys_knot PF00007 Domain 24 858 96.10 26 33.49 Changed Cystine-knot domain
Cys_Met_Meta_PP PF01053 Domain 28 5785 367.10 32 89.38 Changed Cys/Met metabolism PLP-dependent enzyme
Cys_rich_CPCC PF14206 Family 34 79 67.80 36 54.01 Changed Cysteine-rich CPCC
Cys_rich_CPXG PF14255 Family 80 167 51.00 37 79.11 Changed Cysteine-rich CPXCG
Cys_rich_CWC PF14375 Family 62 114 48.90 32 56.05 Changed Cysteine-rich CWC
Cys_rich_FGFR PF00839 Family 73 2130 59.70 25 73.39 Changed Cysteine rich repeat
Cys_rich_KTR PF14205 Family 19 43 51.70 51 78.43 Changed Cysteine-rich KTR
Cys_rich_VLP PF14194 Family 23 58 55.10 53 43.69 Changed Cysteine-rich VLP
Cyt-b5 PF00173 Domain 85 6629 81.20 26 16.88 Changed Cytochrome b5-like Heme/Steroid binding domain
CytadhesinP1 PF12378 Family 8 11 70.70 36 17.75 Changed Trypsin-sensitive surface-exposed protein
Cytadhesin_P30 PF07271 Family 2 6 176.50 17 34.74 Changed Cytadhesin P30/P32
CytB6-F_Fe-S PF08802 Domain 10 174 37.70 44 19.62 Changed Cytochrome B6-F complex Fe-S subunit
CYTH PF01928 Domain 51 1439 170.70 17 60.96 Changed CYTH domain
Cytidylate_kin PF02224 Domain 12 1585 208.50 39 80.09 Changed Cytidylate kinase
Cytidylate_kin2 PF13189 Domain 59 1046 170.30 28 72.15 Changed Cytidylate kinase-like family
CYTL1 PF15153 Family 11 59 122.00 56 91.33 Changed Cytokine-like protein 1
CytochromB561_N PF09786 Family 17 212 469.10 30 87.01 Changed Cytochrome B561, N terminal
Cytochrome-c551 PF10643 Family 5 11 181.80 40 76.89 Changed Photosystem P840 reaction-centre cytochrome c-551
Cytochrome_B PF00033 Domain 8 902 180.20 43 51.18 Changed Cytochrome b/b6/petB
Cytochrome_C554 PF13435 Family 38 535 71.30 16 16.77 Changed Cytochrome c554 and c-prime
Cytochrome_C7 PF14522 Family 80 393 76.70 26 28.58 Changed Cytochrome c7 and related cytochrome c
Cytochrome_cB PF11783 Family 58 88 169.00 36 31.67 Changed Cytochrome c bacterial
Cytochrome_CBB3 PF13442 Domain 171 4510 79.70 23 30.51 Changed Cytochrome C oxidase, cbb3-type, subunit III
Cytochrome_P460 PF16694 Domain 78 131 125.40 24 64.95 Changed Cytochrome P460
Cytochrom_B558a PF05038 Family 8 81 161.70 56 91.41 Changed Cytochrome Cytochrome b558 alpha-subunit
Cytochrom_B559 PF00283 Family 17 235 28.80 54 42.76 Changed Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
Cytochrom_B559a PF00284 Family 40 143 37.90 63 44.75 Changed Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrom_B561 PF03188 Family 39 1728 131.30 22 38.18 Changed Eukaryotic cytochrome b561
Cytochrom_B562 PF07361 Family 47 75 102.20 27 72.65 Changed Cytochrome b562
Cytochrom_B_C PF00032 Domain 190 843 103.50 34 29.08 Changed Cytochrome b(C-terminal)/b6/petD
Cytochrom_B_N_2 PF13631 Domain 33 271 174.90 42 33.95 Changed Cytochrome b(N-terminal)/b6/petB
Cytochrom_C PF00034 Domain 67 4631 97.30 18 36.36 Changed Cytochrome c
Cytochrom_C1 PF02167 Family 59 850 205.30 38 71.50 Changed Cytochrome C1 family
Cytochrom_c3_2 PF14537 Family 50 239 87.80 24 30.97 Changed Cytochrome c3
Cytochrom_C550 PF14495 Domain 27 80 133.60 46 78.60 Changed Cytochrome c-550 domain
Cytochrom_C552 PF02335 Family 26 215 407.00 32 83.56 Changed Cytochrome c552
Cytochrom_CIII PF02085 Domain 22 320 93.10 20 46.52 Changed Class III cytochrome C family
Cytochrom_C_2 PF01322 Domain 147 280 112.50 21 71.32 Changed Cytochrome C'
Cytochrom_C_asm PF01578 Family 39 2421 204.20 20 50.05 Changed Cytochrome C assembly protein
Cytochrom_D1 PF02239 Domain 8 325 252.60 21 58.24 Changed Cytochrome D1 heme domain
Cytochrom_NNT PF03264 Family 70 498 161.10 30 63.51 Changed NapC/NirT cytochrome c family, N-terminal region
CytoC_RC PF02276 Family 18 49 204.20 27 77.85 Changed Photosynthetic reaction centre cytochrome C subunit
Cytokin-bind PF09265 Domain 83 385 241.40 39 52.82 Changed Cytokinin dehydrogenase 1, FAD and cytokinin binding
Cytokin_check_N PF10407 Family 39 76 69.70 34 6.74 Changed Cdc14 phosphatase binding protein N-terminus
Cytomega_gL PF01801 Family 3 4 217.80 39 82.79 Changed Cytomegalovirus glycoprotein L
Cytomega_TRL10 PF06084 Family 5 2 117.50 21 56.76 Changed Cytomegalovirus TRL10 protein
Cytomega_UL20A PF05984 Family 1 1 103.00 100 98.10 Changed Cytomegalovirus UL20A protein
Cytomega_UL84 PF06284 Family 1 1 586.00 100 99.83 Changed Cytomegalovirus UL84 protein
Cytomega_US3 PF05963 Family 2 2 185.50 26 96.36 Changed Cytomegalovirus US3 protein
Cytotoxic PF09000 Domain 7 26 74.00 35 15.60 Changed Cytotoxic
Cyto_heme_lyase PF01265 Family 60 624 228.90 36 82.49 Changed Cytochrome c/c1 heme lyase
Cyt_bd_oxida_I PF01654 Family 640 1306 432.20 34 90.78 Changed Cytochrome bd terminal oxidase subunit I
Cyt_bd_oxida_II PF02322 Family 719 1205 326.80 29 93.76 Changed Cytochrome bd terminal oxidase subunit II
Cyt_c_ox_IV PF12270 Family 54 169 133.30 40 94.15 Changed Cytochrome c oxidase subunit IV
CZB PF13682 Domain 395 481 67.10 22 13.66 Changed Chemoreceptor zinc-binding domain
CzcE PF16986 Domain 15 27 78.90 34 60.64 Changed Heavy-metal resistance protein CzcE
C_GCAxxG_C_C PF09719 Family 398 589 121.50 24 75.40 Changed Putative redox-active protein (C_GCAxxG_C_C)
C_Hendra PF16821 Family 9 1 153.00 100 92.17 Changed C protein from hendra and measles viruses
C_tripleX PF02363 Repeat 165 1560 17.40 38 37.04 Changed Cysteine rich repeat
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