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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
C-C_Bond_Lyase PF15617 Family 70 1551 299.40 49 91.35 Changed C-C_Bond_Lyase of the TIM-Barrel fold
c-SKI_SMAD_bind PF08782 Domain 45 466 91.40 45 15.02 Changed c-SKI Smad4 binding domain
C1-set PF07654 Domain 72 22137 81.10 37 31.02 Changed Immunoglobulin C1-set domain
C1-set_C PF16196 Family 31 1255 50.10 54 20.77 New C1-set C-terminal domain
C1q PF00386 Domain 32 3797 122.70 26 36.69 Changed C1q domain
C1_1 PF00130 Domain 44 9038 52.60 31 8.09 Changed Phorbol esters/diacylglycerol binding domain (C1 domain)
C1_2 PF03107 Domain 76 1071 31.20 34 10.91 Changed C1 domain
C1_3 PF07649 Domain 159 1559 29.60 36 11.09 Changed C1-like domain
C1_4 PF07975 Domain 11 476 55.00 42 12.45 Changed TFIIH C1-like domain
C2 PF00168 Domain 261 40417 105.80 18 20.74 Changed C2 domain
C2-C2_1 PF11618 Domain 50 266 139.50 35 12.31 Changed First C2 domain of RPGR-interacting protein 1
C2-set PF05790 Domain 27 392 77.90 26 28.18 Changed Immunoglobulin C2-set domain
C2-set_2 PF08205 Domain 28 4709 86.50 17 19.56 Changed CD80-like C2-set immunoglobulin domain
C4 PF01413 Domain 166 1621 105.60 47 15.32 Changed C-terminal tandem repeated domain in type 4 procollagen
C5-epim_C PF06662 Family 16 310 179.20 40 36.26 Changed D-glucuronyl C5-epimerase C-terminus
C6 PF01681 Family 114 258 92.80 20 47.63 Changed C6 domain
C6_DPF PF10170 Domain 35 131 87.90 42 57.44 Changed Cysteine-rich domain
C8 PF08742 Domain 989 4148 70.40 30 10.65 Changed C8 domain
C9orf72-like PF15019 Family 25 138 231.40 43 47.48 Changed C9orf72-like protein family
Caa3_CtaG PF09678 Family 281 3831 240.10 39 47.70 Changed Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CAAD PF14159 Domain 124 551 82.50 34 35.65 Changed CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
CAAP1 PF15335 Family 31 138 61.20 50 16.01 Changed Caspase activity and apoptosis inhibitor 1
CaATP_NAI PF12515 Family 36 347 44.00 51 4.64 Changed Ca2+-ATPase N terminal autoinhibitory domain
CAAX_1 PF15895 Family 2 17 167.60 55 85.99 New CAAX box cerebral protein 1
CABIT PF12736 Domain 44 552 233.70 22 49.46 Changed Cell-cycle sustaining, positive selection,
CABS1 PF15367 Family 12 37 364.40 66 90.94 Changed Calcium-binding and spermatid-specific protein 1
CAC1F_C PF16885 Family 9 510 280.30 27 19.87 New Voltage-gated calcium channel subunit alpha, C-term
Cache_1 PF02743 Domain 16 16061 77.30 20 11.87 Changed Cache domain
Cache_2 PF08269 Domain 29 5096 91.60 25 17.46 Changed Cache domain
Cache_3 PF14827 Domain 168 12292 115.40 33 21.75 Changed Sensory domain of two-component sensor kinase
CactinC_cactus PF09732 Domain 55 577 125.00 64 21.69 Changed Cactus-binding C-terminus of cactin protein
Cactin_mid PF10312 Family 130 576 179.50 34 31.42 Changed Conserved mid region of cactin
Cad PF03596 Family 4 4508 178.40 60 92.90 Changed Cadmium resistance transporter
Cadherin PF00028 Family 55 58220 93.00 24 43.41 Changed Cadherin domain
Cadherin-like PF12733 Domain 65 1468 91.80 23 13.28 Changed Cadherin-like beta sandwich domain
Cadherin_2 PF08266 Domain 64 2908 82.60 38 9.40 Changed Cadherin-like
Cadherin_3 PF16184 Family 114 5943 131.90 20 37.47 New Cadherin-like
Cadherin_C PF01049 Family 121 2024 137.90 36 15.38 Changed Cadherin cytoplasmic region
Cadherin_C_2 PF16492 Family 157 1838 87.30 31 10.49 New Cadherin cytoplasmic C-terminal
Cadherin_pro PF08758 Domain 17 540 80.80 29 10.08 Changed Cadherin prodomain like
Cadherin_tail PF15974 Family 7 771 128.40 47 14.37 New Cadherin C-terminal cytoplasmic tail, catenin-binding region
Caenor_Her-1 PF09232 Domain 7 22 112.10 32 69.72 Changed Caenorhabditis elegans Her-1
Caerin_1 PF07440 Family 2 28 23.90 85 64.33 Changed Caerin 1 protein
CAF-1_p150 PF11600 Family 5 104 143.50 57 18.42 Changed Chromatin assembly factor 1 complex p150 subunit, N-terminal
CAF-1_p60_C PF15512 Domain 19 76 151.80 44 29.11 Changed Chromatin assembly factor complex 1 subunit p60, C-terminal
CAF1 PF04857 Family 166 2954 182.10 18 65.64 Changed CAF1 family ribonuclease
CAF1-p150_C2 PF15539 Domain 6 103 250.00 40 30.47 Changed CAF1 complex subunit p150, region binding to CAF1-p60 at C-term
CAF1-p150_N PF15557 Domain 8 74 205.00 39 23.90 Changed CAF1 complex subunit p150, region binding to PCNA
CAF1A PF12253 Family 161 589 76.40 38 10.59 Changed Chromatin assembly factor 1 subunit A
CAF1C_H4-bd PF12265 Family 271 1802 69.90 31 15.68 Changed Histone-binding protein RBBP4 or subunit C of CAF1 complex
CAF20 PF17052 Family 25 63 149.70 51 93.37 New Cap associated factor
Cag12 PF13117 Family 8 671 105.20 40 55.60 Changed Cag pathogenicity island protein Cag12
CagA PF03507 Family 1 3158 137.20 65 47.18 Changed CagA exotoxin
CagD PF16567 Domain 1 307 194.90 96 98.23 New Pathogenicity island component CagD
CAGE1 PF15066 Family 14 77 329.80 46 60.51 Changed Cancer-associated gene protein 1 family
CagE_TrbE_VirB PF03135 Family 12 4214 195.70 22 25.18 Changed CagE, TrbE, VirB family, component of type IV transporter system
CagS PF16707 Family 1 251 194.40 96 98.58 New Cag pathogenicity island protein S of Helicobacter pylori
CagX PF03524 Family 154 4446 224.10 23 75.37 Changed Conjugal transfer protein
CagY_I PF14585 Repeat 2 643 59.90 76 11.26 Changed CagY type 1 repeat
CagY_M PF07337 Repeat 8 5769 32.00 50 42.91 Changed DC-EC Repeat
CagZ PF09053 Domain 1 252 192.80 97 100.00 Changed CagZ
CaKB PF03185 Family 34 328 170.40 35 75.22 Changed Calcium-activated potassium channel, beta subunit
Calcipressin PF04847 Family 6 650 177.90 34 76.55 Changed Calcipressin
Calci_bind_CcbP PF11535 Family 21 127 95.60 33 70.85 Changed Calcium binding
CALCOCO1 PF07888 Coiled-coil 11 447 299.10 31 58.50 Changed Calcium binding and coiled-coil domain (CALCOCO1) like
Calcyon PF06387 Family 14 200 160.40 55 89.36 Changed D1 dopamine receptor-interacting protein (calcyon)
Calc_CGRP_IAPP PF00214 Family 66 421 110.10 28 84.33 Changed Calcitonin / CGRP / IAPP family
Caldesmon PF02029 Family 18 297 316.30 35 79.70 Changed Caldesmon
Caleosin PF05042 Family 126 591 153.30 43 67.30 Changed Caleosin related protein
Calici_coat PF00915 Family 4 14558 130.80 58 65.32 Changed Calicivirus coat protein
Calici_coat_C PF08435 Family 29 3494 185.00 65 46.70 Changed Calicivirus coat protein C-terminal
Calici_MSP PF05752 Family 1 142 164.40 47 99.04 Changed Calicivirus minor structural protein
Calici_PP_N PF08405 Family 1 805 353.30 80 21.28 Changed Viral polyprotein N-terminal
Calmodulin_bind PF07887 Family 76 658 249.40 37 50.04 Changed Calmodulin binding protein-like
CALM_bind PF16025 Family 36 171 132.50 26 19.81 New Calcium-dependent calmodulin binding
Calpain_III PF01067 Domain 177 2440 136.40 28 18.30 Changed Calpain large subunit, domain III
Calpain_inhib PF00748 Family 53 709 131.20 35 75.45 Changed Calpain inhibitor
Calpain_u2 PF16648 Disordered 10 80 68.10 64 8.91 New Unstructured region on Calpain-3
Calponin PF00402 Repeat 71 1837 24.20 59 19.27 Changed Calponin family repeat
Calreticulin PF00262 Family 117 2559 206.20 32 67.55 Changed Calreticulin family
Calsarcin PF05556 Family 35 285 248.20 34 83.76 Changed Calcineurin-binding protein (Calsarcin)
Calsequestrin PF01216 Family 2 267 307.00 55 92.05 Changed Calsequestrin
Calx-beta PF03160 Domain 32 11290 94.10 22 21.86 Changed Calx-beta domain
Calycin_like PF13944 Domain 53 493 122.80 22 45.33 Changed Calycin-like beta-barrel domain
CaM-KIIN PF15170 Family 7 81 73.60 72 98.22 Changed Calcium/calmodulin-dependent protein kinase II inhibitor
CaMBD PF02888 Family 35 464 71.90 60 13.54 Changed Calmodulin binding domain
CaMKII_AD PF08332 Domain 5 1372 116.20 40 37.14 Changed Calcium/calmodulin dependent protein kinase II association domain
CAML PF14963 Family 15 97 219.50 55 69.22 Changed Calcium signal-modulating cyclophilin ligand
Campylo_MOMP PF05538 Family 4 659 320.20 51 99.46 Changed Campylobacter major outer membrane protein
CAMP_factor PF07373 Family 9 1072 217.10 45 81.08 Changed CAMP factor (Cfa)
CamS PF07537 Family 56 5449 312.60 71 83.19 Changed CamS sex pheromone cAM373 precursor
CAMSAP_CC1 PF17095 Family 41 344 58.10 53 4.26 New Spectrin-binding region of Ca2+-Calmodulin
CAMSAP_CH PF11971 Domain 22 601 81.00 36 7.18 Changed CAMSAP CH domain
CAMSAP_CKK PF08683 Domain 29 452 116.10 53 9.77 Changed Microtubule-binding calmodulin-regulated spectrin-associated
CaM_bdg_C0 PF10562 Domain 8 186 28.90 69 3.31 Changed Calmodulin-binding domain C0 of NMDA receptor NR1 subunit
CaM_binding PF07839 Domain 59 332 107.80 29 21.72 Changed Plant calmodulin-binding domain
Candida_ALS PF05792 Repeat 510 3037 32.50 39 34.36 Changed Candida agglutinin-like (ALS)
Candida_ALS_N PF11766 Domain 82 275 191.40 36 16.28 Changed Cell-wall agglutinin N-terminal ligand-sugar binding
CAP PF00188 Domain 98 25003 119.40 22 40.58 Changed Cysteine-rich secretory protein family
CAP-ZIP_m PF15255 Family 16 237 129.30 37 14.78 Changed WASH complex subunit CAP-Z interacting, central region
CAP160 PF07918 Repeat 9 68 26.40 69 7.28 Changed CAP160 repeat
CAP18_C PF12153 Domain 11 55 27.80 49 16.32 Changed LPS binding domain of CAP18 (C terminal)
CAP59_mtransfer PF11735 Family 206 746 229.70 30 50.68 Changed Cryptococcal mannosyltransferase 1
Caprin-1_C PF12287 Family 31 224 261.20 48 38.08 Changed Cytoplasmic activation/proliferation-associated protein-1 C term
Capsid-VNN PF11729 Family 1 510 198.40 76 98.69 Changed nodavirus capsid protein
Capsid_N PF16903 Domain 8 1211 160.30 23 51.33 New Major capsid protein N-terminus
Capsid_NCLDV PF04451 Family 17 1385 162.40 35 53.92 Changed Large eukaryotic DNA virus major capsid protein
Capsid_VP7 PF17071 Family 2 12 269.60 75 99.14 New Outer capsid protein VP7
Capsule_synth PF05159 Family 7 6098 227.30 25 67.78 Changed Capsule polysaccharide biosynthesis protein
Caps_assemb_Wzi PF14052 Family 40 1765 430.10 37 89.22 Changed Capsule assembly protein Wzi
Caps_synth PF05704 Family 28 846 232.20 20 67.80 Changed Capsular polysaccharide synthesis protein
Caps_synth_CapC PF14102 Family 61 614 115.60 37 64.99 Changed Capsule biosynthesis CapC
Caps_synth_GfcC PF06251 Family 9 4696 224.10 55 75.13 Changed Capsule biosynthesis GfcC
CAP_assoc_N PF14504 Domain 57 9757 138.20 45 42.86 Changed CAP-associated N-terminal
CAP_C PF08603 Family 174 851 153.60 39 33.09 Changed Adenylate cyclase associated (CAP) C terminal
CAP_GLY PF01302 Domain 813 4139 67.10 38 10.57 Changed CAP-Gly domain
CAP_N PF01213 Family 180 872 263.00 34 58.56 Changed Adenylate cyclase associated (CAP) N terminal
Carbam_trans_C PF16861 Domain 206 2081 170.20 43 29.90 New Carbamoyltransferase C-terminus
Carbam_trans_N PF02543 Domain 6 2317 295.00 30 57.19 Changed Carbamoyltransferase N-terminus
CarbopepD_reg_2 PF13715 Domain 99 30905 84.10 32 9.11 Changed CarboxypepD_reg-like domain
Carboxyl_trans PF01039 Family 31 44069 347.20 27 77.94 Changed Carboxyl transferase domain
CarboxypepD_reg PF13620 Domain 405 9847 80.40 21 11.82 Changed Carboxypeptidase regulatory-like domain
CarbpepA_inh PF02977 Domain 7 29 44.10 39 52.05 Changed Carboxypeptidase A inhibitor
Carbpep_Y_N PF05388 Family 16 188 104.70 28 19.56 Changed Carboxypeptidase Y pro-peptide
Carb_anhydrase PF00194 Domain 403 6251 214.80 27 71.01 Changed Eukaryotic-type carbonic anhydrase
Carb_bind PF10645 Domain 31 52 48.10 44 15.02 Changed Carbohydrate binding
Carb_kinase PF01256 Family 9 18769 237.80 36 59.12 Changed Carbohydrate kinase
Carcinustatin PF08261 Family 2 6 8.00 89 3.62 Changed Carcinustatin peptide
CARD PF00619 Domain 49 2350 84.20 21 14.83 Changed Caspase recruitment domain
CARDB PF07705 Domain 42 2449 105.30 19 17.01 Changed CARDB
CARD_2 PF16739 Domain 55 530 90.60 25 18.62 New Caspase recruitment domain
CarD_CdnL_TRCF PF02559 Family 981 23907 99.50 36 10.67 Changed CarD-like/TRCF domain
Carla_C4 PF01623 Family 10 245 89.70 45 82.70 Changed Carlavirus putative nucleic acid binding protein
CARM1 PF11531 Family 7 124 92.70 52 18.08 Changed Coactivator-associated arginine methyltransferase 1 N terminal
CARMIL_C PF16000 Family 38 328 232.00 30 22.13 New CARMIL C-terminus
Carmo_coat_C PF08462 Family 8 64 98.80 72 28.51 Changed Carmovirus coat protein
Carn_acyltransf PF00755 Family 465 2776 497.10 27 79.29 Changed Choline/Carnitine o-acyltransferase
Carot_N PF09150 Domain 54 216 144.70 44 62.87 Changed Orange carotenoid protein, N-terminal
CART PF06373 Family 12 117 66.70 67 60.45 Changed Cocaine and amphetamine regulated transcript protein (CART)
Cas1_AcylT PF07779 Domain 23 542 397.40 31 63.67 Changed 10 TM Acyl Transferase domain found in Cas1p
Cas6 PF09559 Family 35 173 192.40 44 92.68 Changed Cas6 Crispr
Cas9-BH PF16593 Family 43 873 33.20 64 2.53 New Bridge helix of CRISPR-associated endonuclease Cas9
Cas9_PI PF16595 Domain 47 872 254.20 44 19.78 New PAM-interacting domain of CRISPR-associated endonuclease Cas9
Cas9_REC PF16592 Domain 13 923 505.60 46 40.19 New REC lobe of CRISPR-associated endonuclease Cas9
Casc1 PF12366 Family 24 230 212.30 18 38.51 Changed Cancer susceptibility candidate 1
Casc1_N PF15927 Family 41 231 191.10 23 26.11 New Cancer susceptibility candidate 1 N-terminus
Casein PF00363 Family 19 231 75.30 32 44.38 Changed Casein
Casein_kappa PF00997 Family 15 311 136.00 71 94.94 Changed Kappa casein
Caskin-Pro-rich PF16907 Family 17 140 87.90 55 7.14 New Proline rich region of Caskin proteins
Caskin-tail PF16632 Disordered 20 141 58.40 62 4.91 New C-terminal region of Caskin
Caskin1-CID PF16600 Family 10 89 50.30 67 4.23 New Caskin1 CASK-interaction domain
CASP_C PF08172 Family 98 505 226.00 32 35.48 Changed CASP C terminal
Cass2 PF14526 Domain 24 2363 146.30 21 73.94 Changed Integron-associated effector binding protein
Cast PF10174 Family 13 648 332.50 27 67.74 Changed RIM-binding protein of the cytomatrix active zone
Castor_Poll_mid PF06241 Family 13 433 101.30 35 12.45 Changed Castor and Pollux, part of voltage-gated ion channel
Cas_APE2256 PF09651 Family 20 155 134.60 24 38.85 Changed CRISPR-associated protein (Cas_APE2256)
Cas_Cas02710 PF09670 Family 8 170 244.90 16 68.44 Changed CRISPR-associated protein (Cas_Cas02710)
Cas_Cas1 PF01867 Family 406 9129 216.40 24 71.16 Changed CRISPR associated protein Cas1
Cas_Cas2CT1978 PF09707 Family 80 2703 83.30 73 78.08 Changed CRISPR-associated protein (Cas_Cas2CT1978)
Cas_Cas4 PF01930 Family 43 2655 161.60 23 50.63 Changed Domain of unknown function DUF83
Cas_Cas5d PF09704 Family 102 4682 214.00 26 89.06 Changed CRISPR-associated protein (Cas_Cas5)
Cas_Cas6 PF01881 Family 145 1211 147.00 25 60.85 Changed CRISPR associated protein Cas6
Cas_Cmr3 PF09700 Family 19 387 316.70 16 88.12 Changed CRISPR-associated protein (Cas_Cmr3)
Cas_Cmr5 PF09701 Family 56 238 120.60 21 88.21 Changed CRISPR-associated protein (Cas_Cmr5)
Cas_Csa4 PF09703 Family 6 16 355.50 25 96.02 Changed CRISPR-associated protein (Cas_Csa4)
Cas_Csa5 PF09702 Family 5 28 99.80 45 74.79 Changed CRISPR-associated protein (Cas_Csa5)
Cas_Csd1 PF09709 Family 132 1012 538.70 26 96.73 Changed CRISPR-associated protein (Cas_Csd1)
CAS_CSE1 PF03378 Family 15 692 384.70 29 44.11 Changed CAS/CSE protein, C-terminus
Cas_Csm6 PF09659 Family 7 1893 300.90 51 90.94 Changed CRISPR-associated protein (Cas_Csm6)
Cas_Csn2 PF09711 Family 11 861 173.70 51 80.07 Changed CRISPR-associated protein (Cas_Csn2)
Cas_csx3 PF09620 Family 19 72 77.00 31 35.46 Changed CRISPR-associated protein (Cas_csx3)
Cas_Csx8 PF09657 Family 2 62 308.20 32 95.45 Changed CRISPR-associated protein Csx8 (Cas_Csx8)
Cas_Csx9 PF09658 Family 2 8 375.60 56 95.31 Changed CRISPR-associated protein (Cas_Csx9)
Cas_Csy1 PF09611 Family 38 626 346.70 38 84.02 Changed CRISPR-associated protein (Cas_Csy1)
Cas_Csy2 PF09614 Family 44 787 243.00 38 80.72 Changed CRISPR-associated protein (Cas_Csy2)
Cas_Csy3 PF09615 Family 43 727 316.60 53 96.67 Changed CRISPR-associated protein (Cas_Csy3)
Cas_Csy4 PF09618 Family 51 722 184.10 38 97.77 Changed CRISPR-associated protein (Cas_Csy4)
Cas_CT1975 PF09344 Family 67 2762 338.00 56 96.98 Changed CT1975-like protein
Cas_CXXC_CXXC PF09706 Domain 10 320 64.60 48 11.17 Changed CRISPR-associated protein (Cas_CXXC_CXXC)
Cas_DxTHG PF09455 Family 71 368 373.10 14 84.16 Changed CRISPR-associated (Cas) DxTHG family
Cas_GSU0053 PF09617 Family 28 118 170.50 27 45.73 Changed CRISPR-associated protein GSU0053 (Cas_GSU0053)
Cas_GSU0054 PF09609 Family 4 140 267.20 14 76.70 Changed CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
Cas_NE0113 PF09623 Family 17 158 191.40 27 58.90 Changed CRISPR-associated protein NE0113 (Cas_NE0113)
Cas_St_Csn2 PF16813 Domain 4 104 316.60 35 97.41 New CRISPR-associated protein Csn2 subfamily St
Cas_TM1802 PF09484 Family 32 234 430.70 13 84.03 Changed CRISPR-associated protein TM1802 (cas_TM1802)
Cas_VVA1548 PF09652 Domain 14 56 89.50 41 50.85 Changed Putative CRISPR-associated protein (Cas_VVA1548)
CAT PF00302 Domain 8 2220 193.50 31 93.29 Changed Chloramphenicol acetyltransferase
Catalase PF00199 Domain 417 21162 355.40 47 67.79 Changed Catalase
Catalase-rel PF06628 Family 701 17428 64.30 33 11.35 Changed Catalase-related immune-responsive
Cathelicidins PF00666 Family 8 282 64.40 47 40.62 Changed Cathelicidin
CathepsinC_exc PF08773 Domain 36 320 123.10 32 25.38 Changed Cathepsin C exclusion domain
Cation_ATPase PF13246 Family 108 5806 100.20 31 11.78 Changed Cation transport ATPase (P-type)
Cation_ATPase_C PF00689 Family 137 28960 175.20 22 18.01 Changed Cation transporting ATPase, C-terminus
Cation_ATPase_N PF00690 Domain 139 27826 66.60 26 7.39 Changed Cation transporter/ATPase, N-terminus
Cation_efflux PF01545 Family 65 50846 194.90 25 61.06 Changed Cation efflux family
CATSPERB PF15149 Family 13 59 410.70 52 50.78 Changed Cation channel sperm-associated protein subunit beta protein family
CATSPERD PF15020 Family 11 126 395.50 29 68.25 Changed Cation channel sperm-associated protein subunit delta
CATSPERG PF15064 Family 4 119 473.40 36 82.75 Changed Cation channel sperm-associated protein subunit gamma
CAT_RBD PF03123 Domain 222 14576 56.50 42 20.49 Changed CAT RNA binding domain
Caudal_act PF04731 Family 30 192 126.60 37 50.31 Changed Caudal like protein activation region
Caudo_bapla16 PF16792 Domain 9 56 372.10 93 99.20 New Phage tail base-plate attachment protein of Caudovirales ORF16
Caudo_bapla_RBP PF08931 Domain 6 116 239.30 56 91.27 Changed Receptor-binding protein of phage tail base-plate Siphoviridae, head
Caudo_TAP PF02413 Family 33 12725 117.20 34 74.98 Changed Caudovirales tail fibre assembly protein, lambda gpK
Caud_tail_N PF16838 Domain 2 46 113.70 49 19.11 New Caudoviral major tail protein N-terminus
Cauli_AT PF03233 Family 6 65 148.80 72 97.71 Changed Aphid transmission protein
Cauli_DNA-bind PF03310 Family 3 87 105.30 66 92.45 Changed Caulimovirus DNA-binding protein
Cauli_VI PF01693 Family 541 2808 43.90 38 16.15 Changed Caulimovirus viroplasmin
Caveolin PF01146 Family 39 440 130.80 43 76.80 Changed Caveolin
CAV_VP3 PF04771 Family 1 111 110.10 92 99.79 Changed Chicken anaemia virus VP-3 protein
Ca_chan_IQ PF08763 Domain 49 1015 76.10 55 4.30 Changed Voltage gated calcium channel IQ domain
Ca_hom_mod PF14798 Family 79 422 227.30 34 75.48 Changed Calcium homeostasis modulator
CBAH PF02275 Domain 8 9834 301.30 38 91.09 Changed Linear amide C-N hydrolases, choloylglycine hydrolase family
CbbQ_C PF08406 Family 140 6594 83.20 51 29.90 Changed CbbQ/NirQ/NorQ C-terminal
CbeA_antitoxin PF06154 Family 12 5334 89.20 86 84.67 Changed CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A
CBF PF03914 Family 406 1820 172.90 25 23.19 Changed CBF/Mak21 family
CBFB_NFYA PF02045 Family 69 1114 56.50 65 19.47 Changed CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
CBFD_NFYB_HMF PF00808 Domain 27 5303 64.10 29 31.86 Changed Histone-like transcription factor (CBF/NF-Y) and archaeal histone
CBFNT PF08143 Domain 16 179 66.20 42 21.24 Changed CBFNT (NUC161) domain
CBF_beta PF02312 Family 19 208 138.80 52 76.26 Changed Core binding factor beta subunit
CbiA PF01656 Domain 79 68109 210.70 18 64.84 Changed CobQ/CobB/MinD/ParA nucleotide binding domain
CbiC PF02570 Family 429 6289 194.90 46 88.01 Changed Precorrin-8X methylmutase
CbiD PF01888 Family 344 3766 256.80 46 67.20 Changed CbiD
CbiG_C PF01890 Domain 493 4237 118.80 34 36.28 Changed Cobalamin synthesis G C-terminus
CbiG_mid PF11761 Domain 95 1957 90.00 36 22.99 Changed Cobalamin biosynthesis central region
CbiG_N PF11760 Domain 343 3820 81.30 48 18.88 Changed Cobalamin synthesis G N-terminal
CbiJ PF02571 Family 358 5741 236.00 37 88.79 Changed Precorrin-6x reductase CbiJ/CobK
CbiK PF06180 Family 8 2529 248.90 48 84.57 Changed Cobalt chelatase (CbiK)
CbiM PF01891 Family 111 4734 203.10 31 84.67 Changed Cobalt uptake substrate-specific transmembrane region
CbiN PF02553 Family 105 2045 67.60 62 68.12 Changed Cobalt transport protein component CbiN
CbiQ PF02361 Family 17 30902 215.20 23 81.42 Changed Cobalt transport protein
CbiX PF01903 Domain 68 16106 101.70 29 60.71 Changed CbiX
CbiZ PF01955 Family 151 776 189.50 29 67.29 Changed Adenosylcobinamide amidohydrolase
CblD PF07434 Family 2 1075 314.80 53 92.00 Changed CblD like pilus biogenesis initiator
Cbl_N PF02262 Domain 37 335 115.00 61 16.85 Changed CBL proto-oncogene N-terminal domain 1
Cbl_N2 PF02761 Domain 31 343 81.20 63 11.60 Changed CBL proto-oncogene N-terminus, EF hand-like domain
Cbl_N3 PF02762 Domain 19 323 83.80 78 11.85 Changed CBL proto-oncogene N-terminus, SH2-like domain
CBM-like PF14683 Domain 158 804 174.00 27 29.16 Changed Polysaccharide lyase family 4, domain III
CBM26 PF16738 Domain 80 493 71.70 27 12.32 New Starch-binding module 26
CBM27 PF09212 Domain 2 72 171.40 24 21.97 Changed Carbohydrate binding module 27
CBM39 PF15886 Domain 41 400 126.10 24 40.16 New Carbohydrate binding domain (family 32)
CBM49 PF09478 Domain 23 400 81.90 25 19.22 Changed Carbohydrate binding domain CBM49
CBM53 PF16760 Family 101 543 86.00 29 21.32 New Starch/carbohydrate-binding module (family 53)
CBM60 PF16841 Domain 41 197 93.50 26 16.28 New Ca-dependent carbohydrate-binding module xylan-binding
CBM9_1 PF06452 Domain 22 1014 181.10 19 27.35 Changed Carbohydrate family 9 binding domain-like
CBM9_2 PF16011 Family 13 420 194.10 41 86.97 New Carbohydrate-binding family 9
CBM_1 PF00734 Domain 765 2670 28.80 50 7.41 Changed Fungal cellulose binding domain
CBM_10 PF02013 Domain 92 301 34.60 40 10.60 Changed Cellulose or protein binding domain
CBM_11 PF03425 Family 6 199 173.20 19 23.92 Changed Carbohydrate binding domain (family 11)
CBM_14 PF01607 Domain 154 9586 53.50 23 22.28 Changed Chitin binding Peritrophin-A domain
CBM_15 PF03426 Domain 2 5 166.00 51 27.71 Changed Carbohydrate binding domain (family 15)
CBM_17_28 PF03424 Domain 8 69 184.60 36 38.32 Changed Carbohydrate binding domain (family 17/28)
CBM_19 PF03427 Domain 2 63 62.90 33 13.06 Changed Carbohydrate binding domain (family 19)
CBM_2 PF00553 Domain 14 3896 99.10 44 25.78 Changed Cellulose binding domain
CBM_20 PF00686 Family 56 2560 93.50 23 15.34 Changed Starch binding domain
CBM_21 PF03370 Family 66 1146 110.50 32 21.89 Changed Carbohydrate/starch-binding module (family 21)
CBM_25 PF03423 Domain 2 233 103.30 36 14.67 Changed Carbohydrate binding domain (family 25)
CBM_26 PF16824 Family 8 393 127.30 61 26.91 New C-terminal carbohydrate-binding module
CBM_3 PF00942 Domain 136 1002 81.30 28 12.15 Changed Cellulose binding domain
CBM_35 PF16990 Domain 5 974 123.50 29 15.49 New Carbohydrate binding module (family 35)
CBM_48 PF02922 Domain 40 27589 85.20 31 12.03 Changed Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CBM_4_9 PF02018 Domain 47 3770 133.00 16 21.75 Changed Carbohydrate binding domain
CBM_5_12 PF02839 Family 42 7243 42.90 34 7.24 Changed Carbohydrate binding domain
CBM_5_12_2 PF14600 Domain 5 271 59.50 54 6.73 Changed Cellulose-binding domain
CBM_6 PF03422 Family 34 2631 121.20 22 17.65 Changed Carbohydrate binding module (family 6)
CBM_X2 PF03442 Domain 67 459 83.50 27 12.85 Changed Carbohydrate binding domain X2
CBP PF12192 Domain 5 18 54.30 39 29.56 Changed Fungal calcium binding protein
CBP4 PF07960 Family 34 261 110.90 34 77.33 Changed CBP4
CBP_BcsF PF11120 Family 11 2976 59.90 81 94.74 Changed Cellulose biosynthesis protein BcsF
CBP_BcsG PF11658 Family 32 3310 505.00 81 95.13 Changed Cellulose biosynthesis protein BcsG
CBP_BcsN PF17038 Family 1 54 279.80 42 88.15 New Cellulose biosynthesis protein BcsN
CBP_BcsO PF17037 Family 4 321 176.30 61 100.22 New Cellulose biosynthesis protein BcsO
CBP_BcsQ PF06564 Domain 9 3735 222.10 64 96.03 Changed Cellulose biosynthesis protein BcsQ
CBP_BcsR PF10945 Family 11 2991 42.00 88 65.27 Changed Cellulose biosynthesis protein BcsR
CBP_BcsS PF17036 Family 18 61 145.20 28 56.08 New Cellulose biosynthesis protein BcsS
CBP_CCPA PF17040 Family 2 8 326.80 50 97.36 New Cellulose-complementing protein A
CBP_GIL PF10995 Family 21 3180 306.30 81 59.96 Changed GGDEF I-site like or GIL domain
CBS PF00571 Domain 846 286447 58.10 19 26.46 Changed CBS domain
CbtA PF09490 Family 92 1374 223.80 33 93.38 Changed Probable cobalt transporter subunit (CbtA)
CbtA_toxin PF06755 Family 4 5138 104.70 79 87.88 Changed CbtA_toxin of type IV toxin-antitoxin system
CbtB PF09489 Family 28 1318 54.30 43 83.42 Changed Probable cobalt transporter subunit (CbtB)
CC PF04942 Domain 41 129 33.30 33 15.22 Changed CC domain
CC2-LZ PF16516 Domain 25 376 102.90 33 22.02 New Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
CC2D2AN-C2 PF15625 Family 19 197 161.10 29 11.66 Changed CC2D2A N-terminal C2 domain
CCAP PF11105 Family 6 63 97.80 32 76.75 Changed Arthropod cardioacceleratory peptide 2a
CCCAP PF15964 Family 5 186 388.70 30 79.57 New Centrosomal colon cancer autoantigen protein family
CCD PF07860 Family 1 5 103.60 85 5.69 Changed WisP family C-Terminal Region
CCD48 PF15799 Family 8 155 231.40 27 97.58 New Coiled-coil domain-containing protein 48
CcdA PF07362 Domain 58 4960 62.00 42 77.82 Changed Post-segregation antitoxin CcdA
CcdB PF01845 Domain 57 3178 96.00 49 97.56 Changed CcdB protein
CCDC-167 PF15188 Coiled-coil 25 85 82.60 43 79.42 Changed Coiled-coil domain-containing protein 167
CCDC106 PF15794 Family 12 138 161.40 37 74.13 New Coiled-coil domain-containing protein 106
CCDC117 PF15810 Family 11 72 130.80 54 52.23 New Coiled-coil domain-containing protein 117
CCDC14 PF15254 Coiled-coil 16 124 480.50 34 86.83 Changed Coiled-coil domain-containing protein 14
CCDC142 PF14923 Coiled-coil 9 106 352.70 32 55.84 Changed Coiled-coil protein 142
CCDC144C PF14915 Coiled-coil 54 302 236.90 45 26.44 Changed CCDC144C protein coiled-coil region
CCDC158 PF15921 Family 3 104 617.80 48 93.97 New Coiled-coil domain-containing protein 158
CCDC168_N PF15804 Repeat 13 168 137.60 18 39.07 New Coiled-coil domain-containing protein 168
CCDC23 PF15674 Family 8 59 61.70 68 44.23 New Coiled-coil domain-containing protein 23
CCDC24 PF15669 Family 25 116 171.80 32 60.63 New Coiled-coil domain-containing protein 24 family
CCDC32 PF14989 Coiled-coil 20 149 134.50 38 72.62 Changed Coiled-coil domain containing 32
CCDC50_N PF15295 Coiled-coil 18 189 120.90 43 29.28 Changed Coiled-coil domain-containing protein 50 N-terminus
CCDC66 PF15236 Coiled-coil 18 164 142.70 37 16.44 Changed Coiled-coil domain-containing protein 66
CCDC71L PF15374 Coiled-coil 14 101 257.30 39 81.22 Changed Coiled-coil domain-containing protein 71L
CCDC73 PF15818 Family 13 91 585.00 44 94.55 New Coiled-coil domain-containing protein 73 family
CCDC74_C PF14917 Coiled-coil 13 60 112.10 53 32.97 Changed Coiled coil protein 74, C terminal
CCDC84 PF14968 Coiled-coil 26 196 241.10 28 84.20 Changed Coiled coil protein 84
CCDC92 PF14916 Coiled-coil 18 226 54.80 42 17.97 Changed Coiled-coil domain of unknown function
CCER1 PF15482 Coiled-coil 7 36 176.50 59 54.37 Changed Coiled-coil domain-containing glutamate-rich protein family 1
CCG PF02754 Family 58 41621 86.10 21 33.30 Changed Cysteine-rich domain
CclA_1 PF16942 Family 5 2353 73.10 100 99.99 New Putative cyclic bacteriocin
CCM2_C PF16545 Domain 10 182 93.20 61 22.11 New Cerebral cavernous malformation protein, harmonin-homology
CcmB PF03379 Family 10 5761 210.10 55 97.01 Changed CcmB protein
CcmD PF04995 Family 137 4934 43.80 47 65.43 Changed Heme exporter protein D (CcmD)
CcmE PF03100 Family 260 5831 129.60 56 82.70 Changed CcmE
CcmF_C PF16327 Family 193 11542 224.30 35 48.06 New Cytochrome c-type biogenesis protein CcmF C-terminal
CcmH PF03918 Family 187 8522 135.20 43 59.73 Changed Cytochrome C biogenesis protein
CCP_MauG PF03150 Family 556 7214 155.10 44 37.91 Changed Di-haem cytochrome c peroxidase
CCSAP PF15748 Family 32 88 219.90 41 93.98 New Centriole, cilia and spindle-associated
CCSMST1 PF15013 Family 32 111 73.80 34 52.62 Changed CCSMST1 family
CCT PF06203 Motif 122 2629 43.60 52 11.04 Changed CCT motif
CCT_2 PF09425 Motif 55 712 25.30 60 10.48 Changed Divergent CCT motif
CD20 PF04103 Family 43 1455 130.70 17 45.81 Changed CD20-like family
CD225 PF04505 Family 149 1542 73.90 28 43.63 Changed Interferon-induced transmembrane protein
CD24 PF14984 Family 15 42 51.60 61 63.72 Changed CD24 protein
CD34_antigen PF06365 Family 22 259 176.80 33 43.32 Changed CD34/Podocalyxin family
CD36 PF01130 Family 256 1604 360.70 22 80.34 Changed CD36 family
CD4-extracel PF09191 Domain 20 116 105.40 61 24.71 Changed CD4, extracellular
CD45 PF12567 Family 19 84 58.40 45 7.17 Changed Leukocyte receptor CD45
CD47 PF04549 Family 19 155 146.90 42 51.68 Changed CD47 transmembrane region
CD52 PF15116 Family 10 27 46.10 45 67.54 Changed CAMPATH-1 antigen
CD99L2 PF12301 Family 15 223 144.50 34 82.03 Changed CD99 antigen like protein 2
CdAMP_rec PF06153 Family 10 5840 108.30 77 99.58 Changed Cyclic-di-AMP receptor
CDC13_N PF16853 Domain 13 37 216.50 41 25.00 New Cell division control protein 13 N-terminus
CDC14 PF08045 Family 45 305 222.90 31 74.60 Changed Cell division control protein 14, SIN component
CDC24 PF06395 Domain 17 308 89.30 39 10.01 Changed CDC24 Calponin
CDC27 PF09507 Family 11 547 356.80 20 87.22 Changed DNA polymerase subunit Cdc27
CDC37_C PF08564 Domain 31 527 88.60 29 20.20 Changed Cdc37 C terminal domain
CDC37_M PF08565 Domain 58 630 111.70 33 26.58 Changed Cdc37 Hsp90 binding domain
CDC37_N PF03234 Domain 112 508 147.90 32 33.64 Changed Cdc37 N terminal kinase binding
CDC45 PF02724 Family 124 788 478.60 27 93.44 Changed CDC45-like protein
CDC48_2 PF02933 Domain 83 2051 68.40 26 9.06 Changed Cell division protein 48 (CDC48), domain 2
CDC48_N PF02359 Domain 103 3848 83.00 40 11.37 Changed Cell division protein 48 (CDC48), N-terminal domain
CDC4_D PF16856 Domain 27 56 50.60 43 6.76 New Cell division control protein 4 dimerisation domain
CDC50 PF03381 Family 345 1429 273.60 32 75.72 Changed LEM3 (ligand-effect modulator 3) family / CDC50 family
Cdc6_C PF09079 Domain 212 1695 80.50 21 16.52 Changed CDC6, C terminal
CDC73_C PF05179 Domain 156 643 158.50 34 34.94 Changed RNA pol II accessory factor, Cdc73 family, C-terminal
CDC73_N PF16050 Family 21 297 220.60 34 49.96 New Paf1 complex subunit CDC73 N-terminal
CdCA1 PF10563 Repeat 8 49 159.30 33 50.48 Changed Cadmium carbonic anhydrase repeat
Cdd1 PF11731 Family 32 684 83.70 46 86.32 Changed Pathogenicity locus
CDH PF02611 Family 50 5655 203.50 62 85.88 Changed CDP-diacylglycerol pyrophosphatase
CDH-cyt PF16010 Family 159 865 169.60 23 33.44 New Cytochrome domain of cellobiose dehydrogenase
CdhC PF03598 Family 64 669 308.30 52 63.42 Changed CO dehydrogenase/acetyl-CoA synthase complex beta subunit
CdhD PF03599 Family 9 1007 293.20 30 79.70 Changed CO dehydrogenase/acetyl-CoA synthase delta subunit
CDI PF02234 Family 123 641 48.30 34 24.55 Changed Cyclin-dependent kinase inhibitor
CDK2AP PF09806 Family 10 257 116.80 45 74.01 Changed Cyclin-dependent kinase 2-associated protein
CDK5_activator PF03261 Family 11 265 200.20 43 73.16 Changed Cyclin-dependent kinase 5 activator protein
CDKN3 PF05706 Domain 2 349 131.80 30 61.23 Changed Cyclin-dependent kinase inhibitor 3 (CDKN3)
CDO_I PF05995 Domain 4 4017 122.10 34 62.67 Changed Cysteine dioxygenase type I
CDP-OH_P_transf PF01066 Family 1027 43631 69.40 32 31.18 Changed CDP-alcohol phosphatidyltransferase
CDP-OH_P_tran_2 PF08009 Domain 47 749 36.90 45 13.45 Changed CDP-alcohol phosphatidyltransferase 2
CDPS PF16715 Domain 18 1705 211.50 85 74.62 New Cyclodipeptide synthase
CDRN PF05174 Domain 4 6 54.70 74 18.23 Changed Cysteine-rich D. radiodurans N terminus
CDRT4 PF15213 Family 16 37 132.60 61 85.46 Changed CMT1A duplicated region transcript 4 protein
CDT1 PF08839 Domain 61 495 157.50 20 22.63 Changed DNA replication factor CDT1 like
CDT1_C PF16679 Domain 115 530 98.60 24 18.62 New DNA replication factor Cdt1 C-terminal domain
CDtoxinA PF03498 Domain 10 765 142.70 30 69.59 Changed Cytolethal distending toxin A/C domain
CDV3 PF15359 Family 24 201 121.50 37 53.96 Changed Carnitine deficiency-associated protein 3
CEBP1_N PF16368 Family 9 143 228.70 58 43.66 New Cytoplasmic polyadenylation element-binding protein 1 N-terminus
CEBP_ZZ PF16366 Domain 50 621 61.50 58 11.02 New Cytoplasmic polyadenylation element-binding protein ZZ domain
CECR6_TMEM121 PF14997 Family 17 210 186.60 30 45.90 Changed CECR6/TMEM121 family
Cecropin PF00272 Family 21 191 30.60 51 50.16 Changed Cecropin family
CedA PF10729 Family 4 2938 76.70 91 93.36 Changed Cell division activator CedA
cEGF PF12662 Domain 582 3801 23.90 48 2.32 Changed Complement Clr-like EGF-like
CelD_N PF02927 Domain 121 1130 84.30 26 11.97 Changed N-terminal ig-like domain of cellulase
Cellsynth_D PF03500 Family 2 389 124.70 56 79.91 Changed Cellulose synthase subunit D
Cellulase PF00150 Domain 65 11685 270.10 14 59.04 Changed Cellulase (glycosyl hydrolase family 5)
Cellulase-like PF12876 Domain 6 58 305.50 28 85.99 Changed Sugar-binding cellulase-like
Cellulose_synt PF03552 Family 12 4295 338.10 28 56.69 Changed Cellulose synthase
CemA PF03040 Family 53 1274 214.50 51 80.59 Changed CemA family
Cementoin PF10511 Family 17 171 16.90 61 20.92 Changed Trappin protein transglutaminase binding domain
CEND1 PF15677 Family 7 45 138.50 57 96.47 New Cell cycle exit and neuronal differentiation protein 1
CENP-B_dimeris PF09026 Domain 2 44 89.90 63 18.78 Changed Centromere protein B dimerisation domain
CENP-B_N PF04218 Domain 6 1074 51.40 25 11.92 Changed CENP-B N-terminal DNA-binding domain
CENP-C_C PF11699 Domain 11 366 84.60 38 12.64 Changed Mif2/CENP-C like
CENP-C_mid PF15620 Family 20 56 237.30 59 29.54 Changed Centromere assembly component CENP-C middle DNMT3B-binding region
CENP-F_C_Rb_bdg PF10490 Domain 10 80 45.90 66 1.84 Changed Rb-binding domain of kinetochore protein Cenp-F/LEK1
CENP-F_leu_zip PF10473 Domain 28 267 136.40 32 15.18 Changed Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
CENP-F_N PF10481 Domain 14 101 254.60 56 11.69 Changed Cenp-F N-terminal domain
CENP-H PF05837 Domain 81 228 102.70 27 41.65 Changed Centromere protein H (CENP-H)
CENP-I PF07778 Family 6 313 351.90 27 56.98 Changed Mis6
CENP-K PF11802 Family 16 140 205.70 33 81.03 Changed Centromere-associated protein K
CENP-L PF13092 Family 81 278 169.40 25 43.69 Changed Kinetochore complex Sim4 subunit Fta1
CENP-M PF11111 Family 16 97 157.50 44 93.80 Changed Centromere protein M (CENP-M)
CENP-N PF05238 Family 28 336 383.60 23 92.72 Changed Kinetochore protein CHL4 like
CENP-O PF09496 Family 66 512 167.80 22 41.44 Changed Cenp-O kinetochore centromere component
CENP-P PF13096 Family 3 79 134.80 47 59.54 Changed CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
CENP-Q PF13094 Family 87 240 163.20 25 43.40 Changed CENP-Q, a CENPA-CAD centromere complex subunit
CENP-R PF06729 Family 11 57 120.10 49 77.28 Changed Kinetochore component, CENP-R
CENP-S PF15630 Family 42 428 73.90 40 45.39 Changed Kinetochore component CENP-S
CENP-T_C PF15511 Domain 11 1814 82.40 64 49.58 Changed Centromere kinetochore component CENP-T histone fold
CENP-T_N PF16171 Family 13 78 299.30 48 72.11 New Centromere kinetochore component CENP-T N-terminus
CENP-U PF13097 Family 23 80 162.50 37 43.90 Changed CENP-A nucleosome associated complex (NAC) subunit
CENP-W PF15510 Family 5 119 80.30 38 88.74 Changed Centromere kinetochore component W
CENP-X PF09415 Family 86 354 72.80 34 50.65 Changed CENP-S associating Centromere protein X
CENP_C_N PF15622 Family 14 72 221.40 52 31.34 Changed Kinetochore assembly subunit CENP-C N-terminal
CEP1-DNA_bind PF09287 Domain 2 8 161.90 26 36.69 Changed CEP-1, DNA binding
CEP170_C PF15308 Family 24 286 479.20 42 44.30 Changed CEP170 C-terminus
CEP19 PF14933 Family 16 162 143.90 35 69.47 Changed CEP19-like protein
CEP209_CC5 PF16574 Family 18 91 126.10 57 6.15 New Coiled-coil region of centrosome protein CE290
Cep3 PF16846 Domain 14 57 388.60 31 62.69 New Centromere DNA-binding protein complex CBF3 subunit B
CEP44 PF15007 Family 33 165 121.40 38 30.54 Changed Centrosomal spindle body, CEP44
Cep57_CLD PF14073 Domain 35 214 163.60 51 37.69 Changed Centrosome localisation domain of Cep57
Cep57_CLD_2 PF14197 Family 22 162 71.60 30 8.93 Changed Centrosome localisation domain of PPC89
Cep57_MT_bd PF06657 Domain 89 341 74.90 33 10.55 Changed Centrosome microtubule-binding domain of Cep57
CEP63 PF17045 Family 10 190 230.00 47 43.59 New Centrosomal protein of 63 kDa
CEP76-C2 PF15627 Family 26 142 157.60 47 24.18 Changed CEP76 C2 domain
Ceramidase PF05875 Family 167 1201 226.80 21 86.36 Changed Ceramidase
Ceramidase_alk PF04734 Domain 137 3206 431.80 48 71.39 Changed Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C PF17048 Domain 156 2566 155.90 58 23.91 New Neutral/alkaline non-lysosomal ceramidase, C-terminal
Cerato-platanin PF07249 Family 4 441 115.10 38 72.11 Changed Cerato-platanin
CesT PF05932 Domain 26 5156 115.00 23 80.88 Changed Tir chaperone protein (CesT) family
CF222 PF15661 Family 12 42 488.30 51 97.15 New C6orf222, uncharacterised family
CfAFP PF05264 Family 4 43 59.70 45 103.26 Changed Choristoneura fumiferana antifreeze protein (CfAFP)
CFC PF09443 Domain 30 130 34.60 50 18.54 Changed Cripto_Frl-1_Cryptic (CFC)
CFEM PF05730 Domain 94 2341 66.00 24 21.30 Changed CFEM domain
CFIA_Pcf11 PF11526 Family 10 87 82.80 30 13.54 Changed Subunit of cleavage factor IA Pcf11
CFTR_R PF14396 Domain 15 156 205.90 64 15.60 Changed Cystic fibrosis TM conductance regulator (CFTR), regulator domain
CG-1 PF03859 Domain 39 526 106.50 50 11.12 Changed CG-1 domain
Cg6151-P PF10233 Domain 89 402 109.30 33 63.54 Changed Uncharacterized conserved protein CG6151-P
CGGC PF08821 Domain 100 298 104.30 30 86.74 Changed CGGC domain
CGI-121 PF08617 Domain 172 771 153.40 23 81.96 Changed Kinase binding protein CGI-121
Cgr1 PF03879 Family 81 504 103.70 32 60.71 Changed Cgr1 family
CgtA PF06306 Family 2 462 203.90 50 87.09 Changed Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)
CH PF00307 Domain 131 16562 102.10 19 13.06 Changed Calponin homology (CH) domain
ChaB PF06150 Domain 97 3605 65.10 75 77.01 Changed ChaB
ChaC PF04752 Family 12 4652 168.70 46 76.42 Changed ChaC-like protein
CHAD PF05235 Domain 368 4835 223.30 30 50.09 Changed CHAD domain
Chalcone PF02431 Domain 8 483 175.40 38 79.67 Changed Chalcone-flavanone isomerase
Chalcone_2 PF16035 Family 12 361 206.90 27 65.50 New Chalcone isomerase like
Chalcone_3 PF16036 Family 60 1406 146.70 23 77.25 New Chalcone isomerase-like
Chal_sti_synt_C PF02797 Domain 6 8926 137.40 42 39.09 Changed Chalcone and stilbene synthases, C-terminal domain
Chal_sti_synt_N PF00195 Domain 5 9459 187.00 40 54.40 Changed Chalcone and stilbene synthases, N-terminal domain
Channel_Tsx PF03502 Family 18 8519 230.70 34 85.99 Changed Nucleoside-specific channel-forming protein, Tsx
CHAP PF05257 Domain 570 66190 88.40 37 24.73 Changed CHAP domain
Chaperone_III PF07824 Domain 4 826 109.60 96 98.14 Changed Type III secretion chaperone domain
ChapFlgA PF13144 Family 73 6826 183.10 31 81.47 Changed Chaperone for flagella basal body P-ring formation
ChAPs PF09295 Family 13 700 263.20 22 38.10 Changed ChAPs (Chs5p-Arf1p-binding proteins)
CHASE PF03924 Domain 213 2720 174.80 19 21.01 Changed CHASE domain
CHASE2 PF05226 Domain 466 2392 326.70 21 46.22 Changed CHASE2 domain
CHASE3 PF05227 Domain 130 2781 135.80 21 20.95 Changed CHASE3 domain
CHASE4 PF05228 Domain 166 1664 157.60 20 22.39 Changed CHASE4 domain
CHAT PF12770 Domain 82 4657 277.30 18 29.87 Changed CHAT domain
CHB_HEX PF03173 Domain 32 803 154.20 39 19.38 Changed Putative carbohydrate binding domain
CHB_HEX_C PF03174 Domain 128 2822 75.50 24 10.01 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHB_HEX_C_1 PF13290 Family 116 530 66.10 29 8.15 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHCH PF06747 Domain 50 1454 35.50 26 22.28 Changed CHCH domain
CHD5 PF04420 Family 113 501 153.40 25 75.23 Changed CHD5-like protein
CHDCT2 PF08074 Domain 19 425 158.20 76 9.92 Changed CHDCT2 (NUC038) domain
CHDNT PF08073 Domain 27 359 53.20 66 3.10 Changed CHDNT (NUC034) domain
CheB_methylest PF01339 Domain 1011 10655 179.50 42 45.65 Changed CheB methylesterase
CheC PF04509 Domain 28 4369 37.50 36 23.49 Changed CheC-like family
CheD PF03975 Family 324 2831 107.50 32 58.89 Changed CheD chemotactic sensory transduction
CheF-arch PF04283 Family 33 240 202.40 27 68.85 Changed Chemotaxis signal transduction system protein F from archaea
CheR PF01739 Domain 20 11131 189.10 36 52.64 Changed CheR methyltransferase, SAM binding domain
CheR_N PF03705 Domain 762 9838 52.50 29 14.72 Changed CheR methyltransferase, all-alpha domain
CheW PF01584 Domain 219 32273 136.20 22 31.84 Changed CheW-like domain
CheX PF13690 Domain 68 2167 98.00 23 41.24 Changed Chemotaxis phosphatase CheX
CheY-binding PF09078 Domain 48 3184 62.90 77 9.56 Changed CheY binding
CheZ PF04344 Family 112 4590 194.30 60 88.14 Changed Chemotaxis phosphatase, CheZ
CHGN PF05679 Family 69 979 396.80 22 63.36 Changed Chondroitin N-acetylgalactosaminyltransferase
Chi-conotoxin PF16981 Domain 50 187 58.30 51 94.79 New chi-Conotoxin or t superfamily
Chibby PF14645 Family 32 247 112.70 33 55.78 Changed Chibby family
ChiC PF06483 Family 21 585 170.40 54 17.15 Changed Chitinase C
CHIPS PF11434 Family 1 3022 90.70 99 61.07 Changed Chemotaxis-inhibiting protein CHIPS
Chisel PF15355 Family 7 65 82.40 74 94.97 Changed Stretch-responsive small skeletal muscle X protein, Chisel
ChitinaseA_N PF08329 Domain 8 725 125.60 43 17.06 Changed Chitinase A, N-terminal domain
Chitin_bind_1 PF00187 Domain 201 2168 40.90 44 9.88 Changed Chitin recognition protein
Chitin_bind_3 PF03067 Domain 228 4381 175.40 30 51.74 Changed Chitin binding domain
Chitin_bind_4 PF00379 Family 108 4741 53.10 32 25.27 Changed Insect cuticle protein
Chitin_synth_1 PF01644 Family 111 1783 144.10 55 22.67 Changed Chitin synthase
Chitin_synth_1N PF08407 Family 145 1109 75.90 45 8.21 Changed Chitin synthase N-terminal
Chitin_synth_2 PF03142 Family 8 2528 321.30 28 36.92 Changed Chitin synthase
ChlamPMP_M PF07548 Family 14 1841 171.40 25 16.44 Changed Chlamydia polymorphic membrane protein middle domain
Chlamy_scaf PF09675 Family 2 19 100.20 28 66.30 Changed Chlamydia-phage Chp2 scaffold (Chlamy_scaf)
Chlam_OMP PF01308 Family 2 1688 275.80 62 96.75 Changed Chlamydia major outer membrane protein
Chlam_OMP3 PF03503 Family 2 129 53.10 80 60.87 Changed Chlamydia cysteine-rich outer membrane protein 3
Chlam_OMP6 PF03504 Family 2 175 88.90 85 17.44 Changed Chlamydia cysteine-rich outer membrane protein 6
Chlam_PMP PF02415 Repeat 528 8246 24.90 46 6.25 Changed Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
Chlam_vir PF05475 Family 3 108 235.50 75 99.89 Changed Chlamydia virulence protein PGP3-D
ChlI PF13541 Domain 112 28983 108.80 33 23.30 Changed Subunit ChlI of Mg-chelatase
Chloroa_b-bind PF00504 Family 157 4219 128.80 26 65.04 Changed Chlorophyll A-B binding protein
Chlorophyllase PF07224 Family 4 130 226.30 39 84.75 Changed Chlorophyllase
Chlorophyllase2 PF12740 Family 20 107 205.20 27 65.26 Changed Chlorophyllase enzyme
Chloroplast_duf PF14476 Family 24 199 235.90 49 74.90 Changed Petal formation-expressed
Chlorosome_CsmC PF11098 Family 5 13 138.80 73 99.18 Changed Chlorosome envelope protein C
Chlorovi_GP_rpt PF06598 Repeat 36 1428 33.90 44 23.00 Changed Chlorovirus glycoprotein repeat
Chlor_dismutase PF06778 Domain 135 7500 196.40 53 77.73 Changed Chlorite dismutase
CHMI PF02962 Domain 1 4167 120.70 44 96.46 Changed 5-carboxymethyl-2-hydroxymuconate isomerase
CholecysA-Rec_N PF09193 Domain 5 53 47.40 70 11.30 Changed Cholecystokinin A receptor, N-terminal
Choline_kinase PF01633 Family 33 3480 197.30 20 51.30 Changed Choline/ethanolamine kinase
Choline_kin_N PF04428 Family 20 258 67.00 37 9.40 Changed Choline kinase N terminus
Choline_sulf_C PF12411 Family 49 880 52.90 58 10.24 Changed Choline sulfatase enzyme C terminal
Choline_transpo PF04515 Family 328 2036 302.20 21 52.74 Changed Plasma-membrane choline transporter
Chol_subst-bind PF09129 Domain 14 319 315.10 69 54.09 Changed Cholesterol oxidase, substrate-binding
Chondroitinas_B PF14592 Family 10 327 283.00 28 50.68 Changed Chondroitinase B
Chon_Sulph_att PF06566 Domain 8 44 209.70 72 39.61 Changed Chondroitin sulphate attachment domain
CHORD PF04968 Family 217 1202 60.50 46 36.13 Changed CHORD
Chordopox_A13L PF05961 Family 7 72 67.30 53 95.85 Changed Chordopoxvirus A13L protein
Chordopox_A15 PF05846 Family 6 49 90.00 57 95.83 Changed Chordopoxvirus A15 protein
Chordopox_A20R PF05941 Family 9 87 327.80 58 77.73 Changed Chordopoxvirus A20R protein
Chordopox_A30L PF06015 Family 7 59 72.80 56 98.13 Changed Chordopoxvirus A30L protein
Chordopox_A33R PF05966 Family 3 73 172.10 49 98.12 Changed Chordopoxvirus A33R protein
Chordopox_A35R PF05989 Family 7 58 158.10 51 95.62 Changed Chordopoxvirus A35R protein
Chordopox_E11 PF06138 Family 6 50 127.20 57 97.07 Changed Chordopoxvirus E11 protein
Chordopox_G2 PF05796 Family 9 74 213.10 60 95.98 Changed Chordopoxvirus protein G2
Chordopox_G3 PF06129 Family 10 61 106.80 46 97.79 Changed Chordopoxvirus G3 protein
Chordopox_L2 PF05803 Family 9 59 81.30 47 90.22 Changed Chordopoxvirus L2 protein
Chordopox_RPO7 PF05864 Family 6 49 63.00 78 99.97 Changed Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7)
Chorein_N PF12624 Family 235 2188 109.90 25 4.10 Changed N-terminal region of Chorein or VPS13
Chorion_1 PF01723 Family 5 94 130.00 28 88.63 Changed Chorion protein
Chorion_2 PF03964 Family 9 49 105.90 32 71.50 Changed Chorion family 2
Chorion_3 PF05387 Family 4 82 196.40 40 87.37 Changed Chorion family 3
Chorion_S16 PF05836 Family 5 38 105.10 77 76.64 Changed Chorion protein S16
Chorismate_bind PF00425 Family 119 54664 253.70 32 55.76 Changed chorismate binding enzyme
Chorismate_synt PF01264 Family 816 19527 344.70 47 93.02 Changed Chorismate synthase
Chor_lyase PF04345 Family 3 5653 158.50 47 93.64 Changed Chorismate lyase
ChpXY PF10216 Family 45 242 359.90 59 91.81 Changed CO2 hydration protein (ChpXY)
CHRD PF07452 Domain 209 1511 119.70 28 51.72 Changed CHRD domain
Chromadorea_ALT PF05535 Family 14 70 71.00 50 40.24 Changed Chromadorea ALT protein
Chromate_transp PF02417 Family 1641 14242 169.80 25 84.93 Changed Chromate transporter
Chrome_Resist PF09828 Family 90 893 129.50 45 49.50 Changed Chromate resistance exported protein
Chromo PF00385 Domain 121 8730 53.60 25 6.81 Changed Chromo (CHRromatin Organisation MOdifier) domain
Chromosome_seg PF13889 Family 62 486 61.40 45 8.18 Changed Chromosome segregation during meiosis
Chromo_shadow PF01393 Domain 98 1048 52.90 40 25.67 Changed Chromo shadow domain
Chs3p PF12271 Family 100 540 269.50 39 88.46 Changed Chitin synthase III catalytic subunit
CHS5_N PF16892 Domain 19 268 47.60 65 10.00 New Chitin biosynthesis protein CHS5 N-terminus
Churchill PF06573 Family 15 104 100.30 65 60.19 Changed Churchill protein
ChuX_HutX PF06228 Domain 159 1876 135.00 52 72.37 Changed Haem utilisation ChuX/HutX
CHU_C PF13585 Domain 69 2188 91.70 27 7.35 Changed C-terminal domain of CHU protein family
ChW PF07538 Repeat 441 4426 34.80 42 26.61 Changed Clostridial hydrophobic W
CHZ PF09649 Domain 50 380 36.10 40 14.82 Changed Histone chaperone domain CHZ
CH_2 PF06294 Domain 185 655 93.80 30 14.51 Changed CH-like domain in sperm protein
CI-B14_5a PF07347 Family 41 172 91.30 41 72.94 Changed NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
CIA30 PF08547 Family 60 1430 157.50 22 52.69 Changed Complex I intermediate-associated protein 30 (CIA30)
CIAPIN1 PF05093 Family 62 797 67.70 43 28.28 Changed Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
Cid2 PF09774 Family 85 405 139.90 31 78.03 Changed Caffeine-induced death protein 2
CIDE-N PF02017 Domain 100 552 73.30 38 24.20 Changed CIDE-N domain
CID_GANP PF16766 Family 16 87 70.40 56 3.90 New Binding region of GANP to ENY2
CIF PF16374 Family 2 211 134.20 80 51.63 New Cycle inhibiting factor (CIF)
cIII PF08134 Family 2 173 40.00 94 90.04 Changed cIII protein family
CIMR PF00878 Family 8 1987 135.80 25 77.52 Changed Cation-independent mannose-6-phosphate receptor repeat
CinA PF02464 Family 75 17589 153.10 37 61.01 Changed Competence-damaged protein
CiPC PF15800 Family 16 113 254.80 40 81.32 New Clock interacting protein circadian
Circo_capsid PF02443 Domain 12 2110 197.30 59 95.51 Changed Circovirus capsid protein
Cir_Bir_Yir PF06022 Family 549 2435 242.00 30 78.65 Changed Plasmodium variant antigen protein Cir/Yir/Bir
Cir_N PF10197 Domain 158 1079 37.30 36 10.10 Changed N-terminal domain of CBF1 interacting co-repressor CIR
CITED PF04487 Family 20 202 178.70 39 90.58 Changed CITED
CitF PF04223 Family 5 5419 455.10 71 91.56 Changed Citrate lyase, alpha subunit (CitF)
CitG PF01874 Family 264 9002 237.30 38 83.87 Changed ATP:dephospho-CoA triphosphoribosyl transferase
CitMHS PF03600 Family 660 32061 339.40 18 86.16 Changed Citrate transporter
CitMHS_2 PF16980 Family 53 922 428.80 52 92.81 New Putative citrate transport
Citrate_bind PF16114 Domain 44 990 152.20 57 28.94 New ATP citrate lyase citrate-binding
Citrate_ly_lig PF08218 Domain 12 5295 184.10 63 53.00 Changed Citrate lyase ligase C-terminal domain
Citrate_synt PF00285 Domain 981 35020 305.50 36 85.49 Changed Citrate synthase
Citrus_P18 PF05520 Family 3 125 152.70 95 100.00 Changed Citrus tristeza virus P18 protein
CitT PF12431 Family 48 4651 29.30 53 12.96 Changed Transcriptional regulator
CitX PF03802 Family 91 5269 163.10 52 85.71 Changed Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CK1gamma_C PF12605 Family 22 418 59.10 51 17.24 Changed Casein kinase 1 gamma C terminal
CK2S PF15011 Family 36 181 145.20 27 69.22 Changed Casein Kinase 2 substrate
CKAP2_C PF15297 Family 17 242 197.60 30 49.49 Changed Cytoskeleton-associated protein 2 C-terminus
CKS PF01111 Domain 110 890 70.20 57 47.51 Changed Cyclin-dependent kinase regulatory subunit
CK_II_beta PF01214 Domain 196 1493 181.80 48 69.04 Changed Casein kinase II regulatory subunit
CLAG PF03805 Family 8 330 517.20 37 86.50 Changed Cytoadherence-linked asexual protein
CLAMP PF14769 Family 69 337 96.10 23 34.00 Changed Flagellar C1a complex subunit C1a-32
CLASP_N PF12348 Family 56 2472 205.10 17 24.08 Changed CLASP N terminal
Class_IIIsignal PF04021 Motif 53 295 26.40 33 23.26 Changed Class III signal peptide
Clathrin PF00637 Family 132 7756 138.30 16 32.40 Changed Region in Clathrin and VPS
Clathrin-link PF09268 Domain 63 731 23.80 61 2.02 Changed Clathrin, heavy-chain linker
Clathrin_bdg PF15045 Family 28 190 71.80 47 10.37 Changed Clathrin-binding box of Aftiphilin, vesicle trafficking
Clathrin_H_link PF13838 Domain 98 1153 61.10 58 5.55 Changed Clathrin-H-link
Clathrin_lg_ch PF01086 Family 95 886 205.00 24 86.36 Changed Clathrin light chain
Clathrin_propel PF01394 Repeat 49 1814 38.00 24 6.48 Changed Clathrin propeller repeat
Clat_adaptor_s PF01217 Domain 7 5498 136.20 24 50.69 Changed Clathrin adaptor complex small chain
Claudin_2 PF13903 Family 14 1124 177.10 19 71.20 Changed PMP-22/EMP/MP20/Claudin tight junction
Claudin_3 PF06653 Family 24 127 156.60 18 87.12 Changed Tight junction protein, Claudin-like
Clavanin PF05452 Family 2 6 70.50 82 100.00 Changed Clavanin
Clc-like PF07062 Family 5 142 170.70 26 61.99 Changed Clc-like
CLCA PF08434 Family 30 615 513.90 25 81.70 Changed Calcium-activated chloride channel
Cleaved_Adhesin PF07675 Domain 4 353 148.30 25 23.20 Changed Cleaved Adhesin Domain
Clenterotox PF03505 Family 4 83 172.20 43 57.18 Changed Clostridium enterotoxin
CLIP PF12032 Domain 229 823 53.00 29 15.36 Changed Regulatory CLIP domain of proteinases
CLIP1_ZNF PF16641 Family 45 629 16.90 52 2.90 New CLIP1 zinc knuckle
CLLAC PF15675 Family 15 61 30.00 62 14.49 New CLLAC-motif containing domain
CLN3 PF02487 Family 97 773 315.10 31 82.70 Changed CLN3 protein
CLN5 PF15014 Family 11 89 275.70 62 85.08 Changed Ceroid-lipofuscinosis neuronal protein 5
CLN6 PF15156 Family 10 105 236.70 72 82.75 Changed Ceroid-lipofuscinosis neuronal protein 6
Cloacin PF03515 Family 8 570 269.70 37 48.09 Changed Colicin-like bacteriocin tRNase domain
Cloacin_immun PF03513 Family 5 232 77.90 75 91.40 Changed Cloacin immunity protein
Closter_coat PF01785 Family 11 1964 172.20 31 72.57 Changed Closterovirus coat protein
Clostridium_P47 PF06597 Family 6 173 379.80 24 78.01 Changed Clostridium P-47 protein
Clp1 PF06807 Family 142 565 115.70 31 25.76 Changed Pre-mRNA cleavage complex II protein Clp1
CLP1_N PF16573 Family 160 647 95.60 34 20.95 New N-terminal beta-sandwich domain of polyadenylation factor
CLP1_P PF16575 Domain 90 1530 176.10 23 33.59 New mRNA cleavage and polyadenylation factor CLP1 P-loop
ClpB_D2-small PF10431 Domain 583 84669 81.60 29 12.24 Changed C-terminal, D2-small domain, of ClpB protein
ClpS PF02617 Family 294 10937 77.60 44 42.23 Changed ATP-dependent Clp protease adaptor protein ClpS
CLPTM1 PF05602 Family 152 943 376.00 29 71.57 Changed Cleft lip and palate transmembrane protein 1 (CLPTM1)
Clp_N PF02861 Family 133 74673 50.60 26 11.27 Changed Clp amino terminal domain, pathogenicity island component
CLP_protease PF00574 Domain 68 38696 175.10 39 73.66 Changed Clp protease
Clr2 PF10383 Family 35 209 137.90 23 20.06 Changed Transcription-silencing protein Clr2
Clr2_transil PF16761 Family 79 208 68.10 36 10.44 New Transcription-silencing protein, cryptic loci regulator Clr2
Clr5 PF14420 Domain 298 1020 52.50 28 9.29 Changed Clr5 domain
CLTH PF10607 Domain 122 2831 167.50 22 39.73 Changed CTLH/CRA C-terminal to LisH motif domain
CLU PF13236 Domain 121 756 218.20 36 16.68 Changed Clustered mitochondria
Cluap1 PF10234 Family 48 297 229.50 41 63.02 Changed Clusterin-associated protein-1
Clusterin PF01093 Family 51 247 329.20 36 91.48 Changed Clusterin
CLU_N PF15044 Family 119 668 74.30 35 5.74 Changed Mitochondrial function, CLU-N-term
CLZ PF16526 Domain 60 408 70.20 49 11.12 New C-terminal leucine zipper domain of cyclic nucleotide-gated channels
CM1 PF03026 Family 1 151 219.30 97 86.43 Changed Influenza C virus M1 protein
CM2 PF03021 Family 1 130 136.30 94 70.15 Changed Influenza C virus M2 protein
CMAS PF02353 Family 12 28607 272.10 40 77.79 Changed Mycolic acid cyclopropane synthetase
Cmc1 PF08583 Family 47 940 69.90 22 59.47 Changed Cytochrome c oxidase biogenesis protein Cmc1 like
CmcI PF04989 Family 15 2082 194.80 73 81.34 Changed Cephalosporin hydroxylase
CMD PF02627 Family 180 44106 82.90 19 50.84 Changed Carboxymuconolactone decarboxylase family
CMS1 PF14617 Family 4 474 221.80 26 79.04 Changed U3-containing 90S pre-ribosomal complex subunit
CMV_1a PF12467 Family 2 314 87.00 86 15.71 Changed Cucumber mosaic virus 1a protein family
CMV_1a_C PF12503 Family 3 131 86.20 72 8.84 Changed Cucumber mosaic virus 1a protein C terminal
CMV_US PF08001 Family 3 117 207.20 35 90.86 Changed CMV US
Cmyb_C PF09316 Family 24 369 150.40 45 23.29 Changed C-myb, C-terminal
CM_1 PF07736 Domain 171 858 114.60 43 91.17 Changed Chorismate mutase type I
CM_2 PF01817 Domain 983 27101 76.40 31 27.08 Changed Chorismate mutase type II
Cm_res_leader PF08077 Family 1 3 17.00 100 100.00 Changed Chloramphenicol resistance gene leader peptide
Cna_B PF05738 Family 75 72825 71.30 32 20.71 Changed Cna protein B-type domain
Cnd1 PF12717 Family 67 1032 172.30 31 14.16 Changed non-SMC mitotic condensation complex subunit 1
Cnd1_N PF12922 Domain 151 567 160.70 27 13.05 Changed non-SMC mitotic condensation complex subunit 1, N-term
Cnd2 PF05786 Family 55 910 495.50 19 88.16 Changed Condensin complex subunit 2
Cnd3 PF12719 Family 131 611 297.30 22 30.02 Changed Nuclear condensing complex subunits, C-term domain
CNDH2_C PF16858 Family 27 301 276.20 22 42.25 New Condensin II complex subunit CAP-H2 or CNDH2, C-term
CNDH2_M PF16869 Family 15 131 136.60 26 23.89 New PF16858
CNDH2_N PF06278 Family 33 252 106.40 39 17.54 Changed Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNF1 PF05785 Domain 3 297 278.40 50 29.82 Changed Rho-activating domain of cytotoxic necrotizing factor
CNH PF00780 Family 54 3124 263.20 20 23.88 Changed CNH domain
Cnl2_NKP2 PF09447 Family 53 181 65.20 43 33.38 Changed Cnl2/NKP2 family protein
cNMPbd_u2 PF16643 Disordered 28 148 151.50 36 15.59 New Unstructured region on cNMP-binding protein
cNMP_binding PF00027 Domain 221 79022 87.70 20 23.76 Changed Cyclic nucleotide-binding domain
Cnn_1N PF07989 Domain 96 684 73.20 38 5.58 Changed Centrosomin N-terminal motif 1
CNOT1_CAF1_bind PF16415 Domain 99 773 209.80 39 10.69 New CCR4-NOT transcription complex subunit 1 CAF1-binding domain
CNOT1_HEAT PF16418 Domain 143 625 147.00 25 7.13 New CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_HEAT_N PF16419 Domain 25 57 225.90 40 11.43 New CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_TTP_bind PF16417 Domain 34 725 174.30 33 8.62 New CCR4-NOT transcription complex subunit 1 TTP binding domain
CNP1 PF08750 Family 41 427 144.10 44 73.58 Changed CNP1-like family
CNPase PF05881 Family 12 109 206.60 53 50.06 Changed 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
CNRIP1 PF15043 Family 17 118 144.20 48 94.70 Changed CB1 cannabinoid receptor-interacting protein 1
CNTF PF01110 Domain 6 73 170.80 46 89.60 Changed Ciliary neurotrophic factor
CNV-Replicase_N PF16688 Domain 1 101 108.00 90 2.05 New Replicase polyprotein N-term from Coronavirus nsp1
CN_hydrolase PF00795 Family 53 57243 240.90 20 64.42 Changed Carbon-nitrogen hydrolase
Coa1 PF08695 Family 38 599 114.00 22 59.36 Changed Cytochrome oxidase complex assembly protein 1
COA2 PF17051 Family 2 49 67.00 35 85.84 New Cytochrome C oxidase assembly factor 2
CoaE PF01121 Domain 11 19729 177.60 39 78.26 Changed Dephospho-CoA kinase
Coagulase PF08764 Domain 11 8701 264.70 44 46.73 Changed Staphylococcus aureus coagulase
Coagulin PF02035 Domain 2 4 173.00 78 93.51 Changed Coagulin
Coatamer_beta_C PF07718 Domain 98 691 136.90 49 15.02 Changed Coatomer beta C-terminal region
CoatB PF10389 Family 5 101 46.50 37 63.27 Changed Bacteriophage coat protein B
Coatomer_b_Cpla PF14806 Domain 57 701 126.40 55 14.24 Changed Coatomer beta subunit appendage platform
Coatomer_E PF04733 Family 7 822 239.90 28 79.10 Changed Coatomer epsilon subunit
Coatomer_g_Cpla PF16381 Domain 68 773 113.10 34 13.33 New Coatomer subunit gamma-1 C-terminal appendage platform
Coatomer_WDAD PF04053 Family 56 1741 391.20 31 40.84 Changed Coatomer WD associated region
Coat_F PF07875 Domain 241 2045 62.20 24 50.78 Changed Coat F domain
Coat_X PF07552 Domain 31 678 58.20 38 73.69 Changed Spore Coat Protein X and V domain
CoA_binding PF02629 Domain 64 31859 96.90 32 29.22 Changed CoA binding domain
CoA_binding_2 PF13380 Domain 230 15333 120.10 33 25.91 Changed CoA binding domain
CoA_binding_3 PF13727 Domain 34 15948 174.10 23 33.20 Changed CoA-binding domain
CoA_trans PF01144 Domain 40 36377 213.00 24 69.87 Changed Coenzyme A transferase
CoA_transf_3 PF02515 Family 57 36549 347.90 29 90.27 Changed CoA-transferase family III
Cobalamin_bind PF01122 Family 48 256 267.00 29 65.72 Changed Eukaryotic cobalamin-binding protein
CobA_CobO_BtuR PF02572 Domain 499 9644 172.10 50 88.05 Changed ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CobD_Cbib PF03186 Family 552 7358 279.40 38 89.84 Changed CobD/Cbib protein
Cobl PF09469 Domain 4 199 94.60 55 10.15 Changed Cordon-bleu ubiquitin-like domain
CobN-Mg_chel PF02514 Family 352 5356 988.80 40 86.91 Changed CobN/Magnesium Chelatase
COBRA PF04833 Family 91 552 160.20 48 34.91 Changed COBRA-like protein
COBRA1 PF06209 Family 16 254 329.20 36 64.04 Changed Cofactor of BRCA1 (COBRA1)
CobS PF02654 Family 689 9532 232.60 36 93.64 Changed Cobalamin-5-phosphate synthase
CobS_N PF12556 Family 54 873 33.70 55 10.34 Changed Cobaltochelatase CobS subunit N terminal
CobT PF06213 Family 65 1537 279.70 26 44.16 Changed Cobalamin biosynthesis protein CobT
CobT_C PF11775 Domain 2 1705 185.20 42 29.79 Changed Cobalamin biosynthesis protein CobT VWA domain
CobU PF02283 Domain 130 9623 167.70 43 91.03 Changed Cobinamide kinase / cobinamide phosphate guanyltransferase
cobW PF02492 Domain 43 53961 173.00 26 58.53 Changed CobW/HypB/UreG, nucleotide-binding domain
CobW_C PF07683 Domain 158 32215 96.80 25 27.85 Changed Cobalamin synthesis protein cobW C-terminal domain
Cob_adeno_trans PF01923 Domain 613 12724 159.90 37 71.26 Changed Cobalamin adenosyltransferase
Codanin-1_C PF15296 Family 29 139 115.30 44 10.89 Changed Codanin-1 C-terminus
CodY PF06018 Domain 17 7071 177.10 60 68.36 Changed CodY GAF-like domain
COE1_DBD PF16422 Domain 9 499 165.70 72 37.91 New Transcription factor COE1 DNA-binding domain
COE1_HLH PF16423 Domain 7 396 43.50 89 8.56 New Transcription factor COE1 helix-loop-helix domain
COesterase PF00135 Domain 63 25777 380.60 25 89.22 Changed Carboxylesterase family
Cofac_haem_bdg PF04187 Family 216 1975 204.00 27 63.42 Changed Haem-binding uptake, Tiki superfamily, ChaN
CofC PF01983 Family 3 2176 173.70 67 80.82 Changed Guanylyl transferase CofC like
Cofilin_ADF PF00241 Domain 495 4454 120.60 19 52.14 Changed Cofilin/tropomyosin-type actin-binding protein
COG2 PF06148 Family 18 586 134.20 27 23.65 Changed COG (conserved oligomeric Golgi) complex component, COG2
COG4 PF08318 Domain 136 683 290.30 26 39.33 Changed COG4 transport protein
COG5 PF10392 Family 16 503 127.20 26 20.95 Changed Golgi transport complex subunit 5
COG6 PF06419 Domain 114 715 506.10 24 85.01 Changed Conserved oligomeric complex COG6
COG7 PF10191 Family 7 451 479.60 20 88.52 Changed Golgi complex component 7 (COG7)
Cohesin PF00963 Domain 40 1501 146.50 21 36.22 Changed Cohesin domain
Cohesin_HEAT PF12765 Family 48 747 39.30 34 2.38 Changed HEAT repeat associated with sister chromatid cohesion
Cohesin_load PF10345 Family 21 468 488.00 23 70.79 Changed Cohesin loading factor
CoiA PF06054 Family 4 6912 276.90 46 90.94 Changed Competence protein CoiA-like family
Coiled PF05710 Coiled-coil 36 128 83.60 32 90.37 Changed Coiled coil
Coiled-coil_56 PF09813 Coiled-coil 3 233 78.90 29 68.38 Changed Coiled-coil domain-containing protein 56
Coilin_N PF15862 Family 41 187 165.40 24 31.79 New Coilin N-terminus
Coleoptericin PF06286 Family 3 17 109.70 46 93.91 Changed Coleoptericin
COLFI PF01410 Family 21 1760 182.40 38 16.87 Changed Fibrillar collagen C-terminal domain
Colicin PF01024 Domain 4 756 172.50 43 39.06 Changed Colicin pore forming domain
Colicin-DNase PF12639 Domain 57 2581 115.70 33 25.89 Changed DNase/tRNase domain of colicin-like bacteriocin
Colicin_C PF12106 Domain 12 142 34.60 45 7.88 Changed Colicin C terminal ribonuclease domain
Colicin_D PF11429 Family 8 241 85.70 54 14.83 Changed Colicin D
Colicin_Ia PF11504 Family 3 303 71.60 99 13.16 Changed Colicin Ia
Colicin_im PF03857 Family 4 141 120.10 62 81.57 Changed Colicin immunity protein
Colicin_immun PF09204 Domain 8 299 80.50 36 87.61 Changed Bacterial self-protective colicin-like immunity
Colicin_M PF14859 Family 2 252 175.00 71 82.55 Changed Colicin M
Colicin_Pyocin PF01320 Domain 15 2190 85.10 52 92.53 Changed Colicin immunity protein / pyocin immunity protein
Colicin_V PF02674 Family 129 17424 149.60 26 73.32 Changed Colicin V production protein
Colipase PF01114 Domain 7 76 38.90 62 36.27 Changed Colipase, N-terminal domain
Colipase-like PF15083 Family 6 76 72.40 40 80.37 Changed Colipase-like
Colipase_C PF02740 Domain 10 74 43.70 71 40.20 Changed Colipase, C-terminal domain
Collagen PF01391 Repeat 41 56655 62.70 39 31.02 Changed Collagen triple helix repeat (20 copies)
Collagen_bind PF05737 Domain 11 7005 132.70 20 24.18 Changed Collagen binding domain
Collagen_bind_2 PF12904 Domain 50 338 91.10 28 18.10 Changed Putative collagen-binding domain of a collagenase
Collagen_mid PF15984 Domain 35 688 178.80 37 46.84 New Bacterial collagen, middle region
Collar PF07484 Domain 180 7154 49.60 48 11.29 Changed Phage Tail Collar Domain
Collectrin PF16959 Family 43 210 143.10 56 25.83 New Renal amino acid transporter
Col_cuticle_N PF01484 Family 337 1906 48.60 23 15.45 Changed Nematode cuticle collagen N-terminal domain
ComA PF02679 Family 110 486 232.10 33 81.27 Changed (2R)-phospho-3-sulfolactate synthase (ComA)
ComC PF03047 Family 6 948 30.60 40 63.55 Changed COMC family
ComFB PF10719 Family 197 998 80.40 29 60.37 Changed Late competence development protein ComFB
ComGF PF15980 Domain 58 6388 100.60 46 75.46 New Putative Competence protein ComGF
ComGG PF14173 Family 16 319 92.60 38 76.19 Changed ComG operon protein 7
ComJ PF11033 Family 8 378 122.40 48 88.79 Changed Competence protein J (ComJ)
ComK PF06338 Family 25 9108 147.80 50 87.68 Changed ComK protein
Comm PF15957 Family 7 76 107.50 32 32.58 New Commissureless
Como_LCP PF02247 Domain 10 159 322.60 39 45.08 Changed Large coat protein
Como_SCP PF02248 Domain 10 150 142.00 43 20.59 Changed Small coat protein
COMP PF11598 Family 10 275 43.70 44 5.16 Changed Cartilage oligomeric matrix protein
COMPASS-Shg1 PF05205 Family 93 475 99.50 28 14.64 Changed COMPASS (Complex proteins associated with Set1p) component shg1
Competence PF03772 Family 84 18615 264.70 25 39.02 Changed Competence protein
CompInhib_SCIN PF11546 Family 4 11746 111.40 55 97.26 Changed Staphylococcal complement inhibitor SCIN
Complex1_30kDa PF00329 Family 666 20187 123.70 36 30.24 Changed Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Complex1_49kDa PF00346 Family 301 25562 196.70 30 51.27 Changed Respiratory-chain NADH dehydrogenase, 49 Kd subunit
Complex1_51K PF01512 Family 99 20024 161.40 41 31.98 Changed Respiratory-chain NADH dehydrogenase 51 Kd subunit
Complex1_LYR PF05347 Family 211 2991 60.60 22 41.07 Changed Complex 1 protein (LYR family)
Complex1_LYR_1 PF13232 Domain 201 852 64.10 24 42.41 Changed Complex1_LYR-like
Complex1_LYR_2 PF13233 Family 65 670 99.30 18 73.85 Changed Complex1_LYR-like
ComP_DUS PF16732 Domain 103 3089 97.70 25 68.26 New Type IV minor pilin ComP, DNA uptake sequence receptor
ComX PF05952 Family 3 109 52.90 32 90.13 Changed Bacillus competence pheromone ComX
ComZ PF10815 Family 9 293 54.90 79 87.60 Changed ComZ
Com_YlbF PF06133 Family 388 18281 105.50 31 83.71 Changed Control of competence regulator ComK, YlbF/YmcA
Con-6 PF10346 Family 150 427 33.80 45 46.30 Changed Conidiation protein 6
Condensation PF00668 Family 22 84068 273.90 19 26.63 Changed Condensation domain
Condensin2nSMC PF12422 Family 50 258 140.40 34 13.81 Changed Condensin II non structural maintenance of chromosomes subunit
Connexin PF00029 Family 237 1881 210.50 42 69.02 Changed Connexin
Connexin40_C PF16791 Domain 22 81 109.70 48 29.94 New Connexin 40 C-terminal domain
Connexin43 PF03508 Family 3 112 19.80 93 5.83 Changed Gap junction alpha-1 protein (Cx43)
Connexin50 PF03509 Family 11 65 66.70 70 15.21 Changed Gap junction alpha-8 protein (Cx50)
Conotoxin PF02950 Domain 112 1285 70.70 26 96.50 Changed Conotoxin
Consortin_C PF15281 Family 19 84 107.80 63 19.45 Changed Consortin C-terminus
Cons_hypoth698 PF03601 Family 13 13805 302.20 40 89.16 Changed Conserved hypothetical protein 698
Cons_hypoth95 PF03602 Family 23 19233 175.80 37 92.12 Changed Conserved hypothetical protein 95
CooC_C PF15976 Family 22 3301 92.60 53 11.14 New CS1-pili formation C-terminal
COOH-NH2_lig PF14395 Family 16 91 215.10 36 50.85 Changed Phage phiEco32-like COOH.NH2 ligase-type 2
COP-gamma_platf PF08752 Domain 156 825 145.10 42 17.18 Changed Coatomer gamma subunit appendage platform subdomain
COP23 PF14218 Family 100 336 140.10 23 64.46 Changed Circadian oscillating protein COP23
CopB PF05275 Family 118 2733 205.40 42 69.25 Changed Copper resistance protein B precursor (CopB)
CopC PF04234 Domain 372 6235 96.50 43 51.83 Changed CopC domain
CopD PF05425 Family 115 8787 106.40 30 27.47 Changed Copper resistance protein D
CopG_antitoxin PF12441 Domain 16 396 71.80 27 84.16 Changed CopG antitoxin of type II toxin-antitoxin system
COPIIcoated_ERV PF07970 Family 188 1814 198.10 30 52.74 Changed Endoplasmic reticulum vesicle transporter
Copine PF07002 Family 15 2185 194.90 39 40.60 Changed Copine
COPI_assoc PF08507 Family 24 621 133.30 21 67.95 Changed COPI associated protein
COPI_C PF06957 Family 35 827 358.20 33 32.96 Changed Coatomer (COPI) alpha subunit C-terminus
CopK PF11525 Family 8 117 68.80 71 75.56 Changed Copper resistance protein K
Copper-bind PF00127 Domain 31 4260 106.70 26 51.09 Changed Copper binding proteins, plastocyanin/azurin family
Copper-fist PF00649 Domain 65 515 38.70 53 8.33 Changed Copper fist DNA binding domain
COPR5 PF15340 Family 7 51 143.40 77 84.38 Changed Cooperator of PRMT5 family
Coprogen_oxidas PF01218 Family 296 7279 288.40 61 94.70 Changed Coproporphyrinogen III oxidase
Coq4 PF05019 Family 117 965 192.40 30 77.62 Changed Coenzyme Q (ubiquinone) biosynthesis protein Coq4
COQ7 PF03232 Family 161 2615 162.90 40 77.23 Changed Ubiquinone biosynthesis protein COQ7
COQ9 PF08511 Domain 177 826 75.50 36 28.46 Changed COQ9
COR PF16095 Family 47 964 209.10 17 15.30 New C-terminal of Roc, COR, domain
Cor1 PF04803 Family 41 220 110.80 32 46.75 Changed Cor1/Xlr/Xmr conserved region
CorA PF01544 Family 59 35758 275.80 22 81.17 Changed CorA-like Mg2+ transporter protein
CorC_HlyC PF03471 Domain 144 48958 80.50 24 18.34 Changed Transporter associated domain
Cornichon PF03311 Family 126 1070 118.40 37 82.12 Changed Cornichon protein
Cornifin PF02389 Family 3 474 102.90 20 37.94 Changed Cornifin (SPRR) family
Coronavirus_5 PF05528 Family 1 123 80.40 88 99.75 Changed Coronavirus gene 5 protein
Corona_3 PF04694 Family 1 96 58.00 82 82.85 Changed Coronavirus ORF3 protein
Corona_5a PF06336 Family 1 108 63.10 84 98.40 Changed Coronavirus 5a protein
Corona_6B_7B PF03262 Family 1 418 195.30 87 99.95 Changed Coronavirus 6B/7B protein
Corona_7 PF02398 Family 1 111 78.70 76 100.46 Changed Coronavirus protein 7
Corona_I PF03187 Family 1 118 184.80 57 98.23 Changed Corona nucleocapsid I protein
Corona_M PF01635 Family 4 1282 194.50 48 96.07 Changed Coronavirus M matrix/glycoprotein
Corona_NS1 PF06145 Family 2 37 28.80 90 77.53 Changed Coronavirus nonstructural protein NS1
Corona_NS2 PF04753 Family 1 88 105.70 72 97.04 Changed Coronavirus non-structural protein NS2
Corona_NS2A PF05213 Family 2 133 205.70 51 36.19 Changed Coronavirus NS2A protein
Corona_NS3b PF03053 Family 4 326 213.30 50 99.26 Changed ORF3b coronavirus protein
Corona_NS4 PF03905 Family 3 59 48.20 68 60.48 Changed Coronavirus non-structural protein NS4
Corona_NS8 PF12093 Family 2 92 71.00 56 96.63 Changed Coronavirus NS8 protein
Corona_NSP4_C PF16348 Domain 5 997 95.60 50 1.72 New Coronavirus nonstructural protein 4 C-terminus
Corona_nucleoca PF00937 Family 3 1566 268.40 35 84.96 Changed Coronavirus nucleocapsid protein
Corona_RPol_N PF06478 Family 6 739 332.90 62 6.08 Changed Coronavirus RPol N-terminus
Corona_S1 PF01600 Family 3 4099 369.50 48 68.83 Changed Coronavirus S1 glycoprotein
Corona_S2 PF01601 Family 4 2164 423.20 40 49.66 Changed Coronavirus S2 glycoprotein
CortBP2 PF09727 Family 43 465 153.20 42 16.68 Changed Cortactin-binding protein-2
Cortex-I_coil PF09304 Coiled-coil 4 29 101.00 30 22.63 Changed Cortexillin I, coiled coil
Cortexin PF11057 Family 7 138 74.20 57 90.59 Changed Cortexin of kidney
Costars PF14705 Domain 76 374 76.10 45 36.19 Changed Costars
CotE PF10628 Family 48 471 173.20 57 95.70 Changed Outer spore coat protein E (CotE)
CotH PF08757 Family 40 2029 308.10 20 55.89 Changed CotH protein
CotJA PF11007 Family 173 1282 34.70 41 44.56 Changed Spore coat associated protein JA (CotJA)
CotJB PF12652 Domain 248 1381 77.00 43 83.28 Changed CotJB protein
Couple_hipA PF13657 Domain 109 5298 101.20 30 26.46 Changed HipA N-terminal domain
COX1 PF00115 Family 742 399321 233.50 56 93.05 Changed Cytochrome C and Quinol oxidase polypeptide I
COX14 PF14880 Family 37 326 57.30 24 33.63 Changed Cytochrome oxidase c assembly
COX15-CtaA PF02628 Family 67 10728 270.80 35 82.67 Changed Cytochrome oxidase assembly protein
COX16 PF14138 Family 107 477 79.10 35 59.08 Changed Cytochrome c oxidase assembly protein COX16
COX17 PF05051 Family 105 541 46.60 48 57.07 Changed Cytochrome C oxidase copper chaperone (COX17)
COX2 PF00116 Domain 12 45825 105.80 45 44.00 Changed Cytochrome C oxidase subunit II, periplasmic domain
COX2-transmemb PF09125 Domain 1 16 37.20 61 22.48 Changed Cytochrome C oxidase subunit II, transmembrane
COX2_TM PF02790 Family 11 38907 80.20 42 34.12 Changed Cytochrome C oxidase subunit II, transmembrane domain
COX3 PF00510 Family 8 30250 204.80 35 93.56 Changed Cytochrome c oxidase subunit III
COX4 PF02936 Family 99 762 128.40 29 75.26 Changed Cytochrome c oxidase subunit IV
COX4_pro PF03626 Family 415 12405 73.90 40 70.10 Changed Prokaryotic Cytochrome C oxidase subunit IV
COX4_pro_2 PF07835 Domain 38 620 44.70 48 65.15 Changed Bacterial aa3 type cytochrome c oxidase subunit IV
COX5A PF02284 Domain 59 581 99.10 53 66.06 Changed Cytochrome c oxidase subunit Va
COX5B PF01215 Domain 23 758 113.90 33 66.22 Changed Cytochrome c oxidase subunit Vb
COX6A PF02046 Family 48 659 98.10 35 77.20 Changed Cytochrome c oxidase subunit VIa
COX6B PF02297 Domain 58 1262 66.60 32 57.56 Changed Cytochrome oxidase c subunit VIb
COX6C PF02937 Family 47 234 67.20 40 69.68 Changed Cytochrome c oxidase subunit VIc
COX7a PF02238 Family 89 626 51.80 30 58.87 Changed Cytochrome c oxidase subunit VIIa
COX7B PF05392 Family 19 105 74.40 61 94.28 Changed Cytochrome C oxidase chain VIIB
COX7C PF02935 Family 84 451 63.90 34 66.89 Changed Cytochrome c oxidase subunit VIIc
COX8 PF02285 Family 36 165 41.50 37 55.08 Changed Cytochrome oxidase c subunit VIII
COXG PF06240 Family 12 3275 128.90 46 63.70 Changed Carbon monoxide dehydrogenase subunit G (CoxG)
CoxIIa PF08113 Family 4 62 32.70 46 68.33 Changed Cytochrome c oxidase subunit IIa family
COX_ARM PF06481 Motif 147 5789 45.80 47 14.42 Changed COX Aromatic Rich Motif
Co_AT_N PF12557 Family 87 5167 21.70 58 10.91 Changed Cob(I)alamin adenosyltransferase N terminal
CO_deh_flav_C PF03450 Domain 112 14302 98.10 28 24.04 Changed CO dehydrogenase flavoprotein C-terminal domain
CO_dh PF02552 Family 6 147 159.60 27 71.40 Changed CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
CP12 PF02672 Family 99 558 63.70 35 42.15 Changed CP12 domain
CP2 PF04516 Family 12 1062 202.50 37 36.21 Changed CP2 transcription factor
CpcD PF01383 Domain 116 814 54.10 33 24.11 Changed CpcD/allophycocyanin linker domain
CPDase PF07823 Domain 8 258 183.70 22 88.61 Changed Cyclic phosphodiesterase-like protein
CpeS PF09367 Domain 49 453 159.90 31 89.27 Changed CpeS-like protein
CpeT PF06206 Family 72 482 162.00 27 80.69 Changed CpeT/CpcT family (DUF1001)
CPG4 PF15481 Family 20 87 91.40 22 25.72 Changed Chondroitin proteoglycan 4
CPL PF08144 Domain 65 543 136.90 26 20.57 Changed CPL (NUC119) domain
Cpl-7 PF08230 Domain 34 467 38.20 53 16.05 Changed Cpl-7 lysozyme C-terminal domain
Cpn10 PF00166 Domain 39 21785 91.90 47 94.04 Changed Chaperonin 10 Kd subunit
Cpn60_TCP1 PF00118 Family 57 48822 381.30 42 87.02 Changed TCP-1/cpn60 chaperonin family
CppA_C PF14507 Family 15 1655 104.20 36 40.20 Changed CppA C-terminal
CppA_N PF14506 Family 5 1323 121.00 47 48.62 Changed CppA N-terminal
CPSase_L_chain PF00289 Domain 99 47110 109.20 52 15.66 Changed Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_D2 PF02786 Domain 16 93493 201.90 33 32.77 Changed Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D3 PF02787 Domain 1133 26193 119.90 43 12.85 Changed Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPSase_sm_chain PF00988 Domain 770 22822 124.70 49 28.96 Changed Carbamoyl-phosphate synthase small chain, CPSase domain
CPSF100_C PF13299 Family 111 575 146.80 29 18.15 Changed Cleavage and polyadenylation factor 2 C-terminal
CPSF73-100_C PF11718 Domain 177 677 232.80 27 32.91 Changed Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
CPSF_A PF03178 Family 67 2185 292.90 21 25.79 Changed CPSF A subunit region
CPT PF07931 Domain 7 1966 181.00 76 82.80 Changed Chloramphenicol phosphotransferase-like protein
Cpta_toxin PF07254 Family 15 3252 126.10 81 94.86 Changed Membrane-bound toxin component of toxin-antitoxin system
CPT_N PF16484 Domain 31 352 46.70 61 6.59 New Carnitine O-palmitoyltransferase N-terminus
CPW_WPC PF09717 Domain 164 988 60.60 29 52.13 Changed Plasmodium falciparum domain of unknown function (CPW_WPC)
CpxA_peri PF16527 Domain 10 3501 104.70 81 22.98 New Two-component sensor protein CpxA, periplasmic domain
CpXC PF14353 Family 51 235 123.80 24 50.98 Changed CpXC protein
CP_ATPgrasp_1 PF04174 Family 18 57 268.80 42 53.71 Changed A circularly permuted ATPgrasp
CP_ATPgrasp_2 PF14403 Family 350 7182 372.10 49 57.83 Changed Circularly permuted ATP-grasp type 2
CR6_interact PF10147 Family 8 154 185.10 30 82.98 Changed Growth arrest and DNA-damage-inducible proteins-interacting protein 1
CRA PF06589 Family 3 44 134.30 57 96.62 Changed Circumsporozoite-related antigen (CRA)
CRAL_TRIO PF00650 Domain 105 7348 152.20 19 35.33 Changed CRAL/TRIO domain
CRAL_TRIO_2 PF13716 Domain 64 1999 131.50 23 14.22 Changed Divergent CRAL/TRIO domain
CRAL_TRIO_N PF03765 Domain 262 3336 60.40 24 14.20 Changed CRAL/TRIO, N-terminal domain
CRAM_rpt PF07016 Repeat 2 196 21.90 94 133.15 Changed Cysteine-rich acidic integral membrane protein precursor
CRA_rpt PF07046 Repeat 5 190 40.50 78 51.49 Changed Cytoplasmic repetitive antigen (CRA) like repeat
CRCB PF02537 Family 986 26229 111.80 36 86.34 Changed CrcB-like protein, Camphor Resistance (CrcB)
CRC_subunit PF08624 Family 73 538 132.50 54 23.54 Changed Chromatin remodelling complex Rsc7/Swp82 subunit
CreA PF05981 Family 82 5074 129.90 66 81.44 Changed CreA protein
Creatinase_N PF01321 Domain 103 31861 130.30 22 32.55 Changed Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 Domain 698 5080 159.90 30 26.59 New Creatinase/Prolidase N-terminal domain
Creatininase PF02633 Family 456 5075 228.80 35 90.23 Changed Creatinine amidohydrolase
Creb_binding PF09030 Domain 37 220 109.80 50 5.16 Changed Creb binding
CreD PF06123 Family 88 4290 402.00 58 94.08 Changed Inner membrane protein CreD
Cren7 PF11520 Family 8 66 57.10 55 92.99 Changed Chromatin protein Cren7
CREPT PF16566 Domain 33 381 135.50 37 25.22 New Cell-cycle alteration and expression-elevated protein in tumour
CReP_N PF10472 Domain 11 48 341.10 58 53.70 Changed eIF2-alpha phosphatase phosphorylation constitutive repressor
CRF PF00473 Family 27 321 38.10 42 21.82 Changed Corticotropin-releasing factor family
CRF-BP PF05428 Family 16 145 260.80 44 89.46 Changed Corticotropin-releasing factor binding protein (CRF-BP)
CRF1 PF10380 Family 14 76 121.60 42 15.62 Changed Transcription factor CRF1
CRIC_ras_sig PF10534 Domain 38 352 89.60 45 11.23 Changed Connector enhancer of kinase suppressor of ras
CRIM PF16978 Family 103 487 142.90 33 20.17 New SAPK-interacting protein 1 (Sin1), middle CRIM domain
Crinivirus_P26 PF07416 Family 1 5 227.00 99 100.00 Changed Crinivirus P26 protein
Cript PF10235 Family 52 362 89.10 43 73.86 Changed Microtubule-associated protein CRIPT
Crisp PF08562 Domain 75 323 54.70 48 23.47 Changed Crisp
CRISPR_assoc PF08798 Domain 114 2803 208.70 49 97.92 Changed CRISPR associated protein
CRISPR_Cas2 PF09827 Family 427 5654 75.70 27 73.76 Changed CRISPR associated protein Cas2
CRISPR_Cse1 PF09481 Family 109 2729 454.10 48 89.65 Changed CRISPR-associated protein Cse1 (CRISPR_cse1)
CRISPR_Cse2 PF09485 Family 104 2685 144.60 44 79.04 Changed CRISPR-associated protein Cse2 (CRISPR_cse2)
Crl PF07417 Family 27 3564 115.30 76 90.52 Changed Transcriptional regulator Crl
CRM1_C PF08767 Domain 25 872 288.00 35 29.02 Changed CRM1 C terminal
Cro PF09048 Domain 6 775 58.80 67 85.04 Changed Cro
Crp PF00325 Domain 12 10483 31.90 55 13.96 Changed Bacterial regulatory proteins, crp family
CRPA PF05745 Family 5 148 122.30 60 84.29 Changed Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
CRPV_capsid PF08762 Domain 7 303 158.60 33 22.87 Changed CRPV capsid protein like
CRS1_YhbY PF01985 Domain 594 15002 83.80 43 71.26 Changed CRS1 / YhbY (CRM) domain
CRT-like PF08627 Family 12 481 226.00 23 68.27 Changed CRT-like, chloroquine-resistance transporter-like
CRT10 PF08728 Family 9 266 318.00 15 54.36 Changed CRT10
CrtC PF07143 Family 145 2962 301.60 48 79.59 Changed Hydroxyneurosporene synthase (CrtC)
Crust_neurohorm PF01147 Family 14 342 63.80 36 56.94 Changed Crustacean CHH/MIH/GIH neurohormone family
Crust_neuro_H PF03858 Family 8 56 38.40 53 28.83 Changed Crustacean neurohormone H
CryBP1 PF07029 Family 2 84 144.50 33 71.43 Changed CryBP1 protein
Cryptochrome_C PF12546 Family 20 157 115.70 40 20.10 Changed Blue/Ultraviolet sensing protein C terminal
Crystall PF00030 Domain 101 4501 80.90 30 43.52 Changed Beta/Gamma crystallin
Crystallin PF00525 Family 13 554 47.10 64 36.16 Changed Alpha crystallin A chain, N terminal
Crystall_2 PF09076 Domain 7 36 70.30 38 63.54 Changed Beta/Gamma crystallin
Crystall_3 PF08964 Family 10 200 87.20 40 15.68 Changed Beta/Gamma crystallin
CS PF04969 Domain 76 4522 77.10 19 23.25 Changed CS domain
CsbD PF05532 Family 92 18022 52.00 47 78.42 Changed CsbD-like
CSD PF00313 Domain 34 66210 65.20 51 76.99 Changed 'Cold-shock' DNA-binding domain
Cse1 PF08506 Domain 15 1235 292.80 23 31.67 Changed Cse1
CSF-1 PF05337 Family 9 138 229.50 41 90.66 Changed Macrophage colony stimulating factor-1 (CSF-1)
CSG2 PF16965 Family 12 78 317.90 31 82.26 New Ceramide synthase regulator
CsgE PF10627 Family 22 2864 101.90 86 78.00 Changed Curli assembly protein CsgE
CsgF PF10614 Family 13 2906 122.90 84 91.08 Changed Type VIII secretion system (T8SS), CsgF protein
CsgG PF03783 Family 18 4685 197.10 48 72.02 Changed Curli production assembly/transport component CsgG
CsiD PF08943 Domain 16 3030 289.30 89 90.36 Changed CsiD
CsiV PF10972 Family 47 874 204.30 35 85.41 Changed Peptidoglycan-binding protein, CsiV
Csm1 PF12539 Family 74 267 88.60 40 21.31 Changed Chromosome segregation protein Csm1/Pcs1
CSM2 PF16834 Domain 13 45 189.60 47 91.90 New Shu complex component Csm2, DNA-binding
CSN8_PSD8_EIF3K PF10075 Family 35 1672 140.20 20 55.31 Changed CSN8/PSMD8/EIF3K family
CsoS2_M PF12288 Family 11 139 306.30 33 67.95 Changed Carboxysome shell peptide mid-region
CsoSCA PF08936 Domain 25 106 391.70 41 79.92 Changed Carboxysome Shell Carbonic Anhydrase
CsrA PF02599 Family 285 7962 52.40 65 76.18 Changed Global regulator protein family
CSRNP_N PF16019 Family 33 351 189.30 53 36.80 New Cysteine/serine-rich nuclear protein N-terminus
CSS-motif PF12792 Domain 96 16169 199.30 22 38.94 Changed CSS motif domain associated with EAL
CssAB PF16831 Domain 2 130 122.50 67 76.94 New CS6 fimbrial subunits A and B, Coli surface antigen 6
CST-I PF06002 Family 3 223 249.30 46 91.49 Changed Alpha-2,3-sialyltransferase (CST-I)
CstA PF02554 Family 54 16031 321.60 48 55.75 Changed Carbon starvation protein CstA
CstA_5TM PF13722 Domain 227 13923 126.30 51 19.10 Changed 5TM C-terminal transporter carbon starvation CstA
CSTF1_dimer PF16699 Domain 30 189 56.20 49 13.78 New Cleavage stimulation factor subunit 1, dimerisation domain
CSTF2_hinge PF14327 Family 109 810 77.90 34 19.25 Changed Hinge domain of cleavage stimulation factor subunit 2
CSTF_C PF14304 Domain 22 671 39.40 43 9.90 Changed Transcription termination and cleavage factor C-terminal
CT47 PF15623 Family 11 46 248.70 44 91.42 Changed Cancer/testis gene family 47
CtaG_Cox11 PF04442 Family 239 2499 138.30 42 69.46 Changed Cytochrome c oxidase assembly protein CtaG/Cox11
CTC1 PF15489 Family 11 122 683.50 35 87.28 Changed CST, telomere maintenance, complex subunit CTC1
CTC1_2 PF15491 Family 11 58 278.40 44 28.16 Changed CST, telomere maintenance, complex subunit CTC1
CTD PF12815 Domain 33 407 82.10 36 12.04 Changed Spt5 C-terminal nonapeptide repeat binding Spt4
CTD_bind PF04818 Family 301 2496 64.50 23 8.64 Changed RNA polymerase II-binding domain.
Ctf8 PF09696 Family 67 478 107.40 28 70.55 Changed Ctf8
CTF_NFI PF00859 Family 14 560 230.00 50 55.98 Changed CTF/NF-I family transcription modulation region
CTI PF06934 Family 46 804 655.10 52 88.64 Changed Fatty acid cis/trans isomerase (CTI)
CtIP_N PF10482 Domain 22 172 113.30 66 15.99 Changed Tumour-suppressor protein CtIP N-terminal domain
CTK3 PF12243 Domain 8 262 132.50 45 38.42 Changed CTD kinase subunit gamma CTK3
CTK3_C PF12350 Domain 63 282 70.10 40 24.00 Changed CTD kinase subunit gamma CTK3 C-terminus
CtkA_N PF16948 Domain 21 123 87.80 45 29.47 New Cell translocating kinase A N-terminus
CtnDOT_TraJ PF07863 Family 13 787 61.60 50 19.37 Changed Homologues of TraJ from Bacteroides conjugative transposon
CTNNB1_binding PF08347 Family 23 590 162.50 46 40.59 Changed N-terminal CTNNB1 binding
CTNNBL PF08216 Domain 109 529 100.50 40 18.40 Changed Catenin-beta-like, Arm-motif containing nuclear
CTP-dep_RFKase PF01982 Family 97 311 120.70 40 59.39 Changed Domain of unknown function DUF120
CTP_synth_N PF06418 Domain 494 20410 262.30 62 49.40 Changed CTP synthase N-terminus
CTP_transf_1 PF01148 Family 36 22971 261.80 32 93.02 Changed Cytidylyltransferase family
CTP_transf_3 PF02348 Family 13 14129 215.60 31 81.36 Changed Cytidylyltransferase
CTP_transf_like PF01467 Domain 65 55935 141.60 23 64.49 Changed Cytidylyltransferase-like
Ctr PF04145 Family 460 2030 135.50 23 64.55 Changed Ctr copper transporter family
CtsR PF05848 Family 169 7153 147.60 63 95.34 Changed Firmicute transcriptional repressor of class III stress genes (CtsR)
CTU2 PF10288 Family 110 434 101.80 24 23.32 Changed Cytoplasmic tRNA 2-thiolation protein 2
CTV_P13 PF06922 Family 3 68 115.50 92 100.00 Changed Citrus tristeza virus P13 protein
CTV_P23 PF04808 Family 3 297 205.50 92 99.99 Changed Citrus tristeza virus (CTV) P23 protein
CTV_P33 PF07184 Family 2 263 208.20 88 100.00 Changed Citrus tristeza virus P33 protein
CTV_P6 PF06706 Family 2 18 50.70 87 98.07 Changed Citrus tristeza virus 6-kDa protein
CTXphi_pIII-N1 PF16710 Domain 1 142 94.00 99 27.35 New N-terminal N1 domain of Vibrio phage CTXphi pIII
CTX_RstB PF07459 Family 1 168 99.80 85 94.67 Changed CTX phage RstB protein
Cu-binding_MopE PF11617 Repeat 59 512 26.80 41 11.46 Changed Putative metal-binding motif
Cu-oxidase PF00394 Domain 72 25014 142.70 19 32.35 Changed Multicopper oxidase
Cu-oxidase_2 PF07731 Domain 127 22342 130.50 24 24.60 Changed Multicopper oxidase
Cu-oxidase_3 PF07732 Domain 88 26234 108.30 31 22.42 Changed Multicopper oxidase
Cu-oxidase_4 PF02578 Family 732 16644 224.80 35 89.38 Changed Multi-copper polyphenol oxidoreductase laccase
Cu2_monooxygen PF01082 Domain 146 767 121.50 29 20.44 Changed Copper type II ascorbate-dependent monooxygenase, N-terminal domain
Cu2_monoox_C PF03712 Domain 70 841 142.20 29 24.54 Changed Copper type II ascorbate-dependent monooxygenase, C-terminal domain
CUB PF00431 Domain 24 17627 107.40 26 31.35 Changed CUB domain
CUB_2 PF02408 Domain 24 270 113.70 19 26.13 Changed CUB-like domain
Cucumo_2B PF03263 Family 1 208 102.50 76 95.00 Changed Cucumovirus protein 2B
Cucumo_coat PF00760 Domain 1 750 183.20 87 94.91 Changed Cucumovirus coat protein
CUE PF02845 Family 125 2843 41.00 24 7.79 Changed CUE domain
Cul7 PF11515 Family 27 286 74.90 53 2.82 Changed Mouse development and cellular proliferation protein Cullin-7
Cullin PF00888 Family 425 4150 477.10 21 66.97 Changed Cullin family
Cullin_binding PF03556 Family 212 1329 113.60 35 42.96 Changed Cullin binding
Cullin_Nedd8 PF10557 Domain 421 2813 64.40 42 7.92 Changed Cullin protein neddylation domain
Cupin_1 PF00190 Domain 65 7399 138.00 20 62.96 Changed Cupin
Cupin_2 PF07883 Domain 156 70751 70.00 19 36.65 Changed Cupin domain
Cupin_3 PF05899 Domain 32 7888 76.90 30 44.71 Changed Protein of unknown function (DUF861)
Cupin_4 PF08007 Family 26 6996 290.70 44 74.39 Changed Cupin superfamily protein
Cupin_5 PF06172 Domain 329 6326 131.30 66 82.31 Changed Cupin superfamily (DUF985)
Cupin_6 PF12852 Domain 208 7310 171.90 30 57.75 Changed Cupin
Cupin_7 PF12973 Domain 46 3034 89.50 26 55.89 Changed ChrR Cupin-like domain
Cupin_8 PF13621 Domain 55 4094 241.60 18 50.62 Changed Cupin-like domain
Cupredoxin_1 PF13473 Domain 62 8071 104.50 25 35.31 Changed Cupredoxin-like domain
Curlin_rpt PF07012 Repeat 103 18543 34.00 39 64.84 Changed Curlin associated repeat
Curto_V2 PF07325 Family 2 36 121.70 71 100.00 Changed Curtovirus V2 protein
Curto_V3 PF07436 Family 1 38 81.60 78 97.15 Changed Curtovirus V3 protein
CusF_Ec PF11604 Family 249 5078 66.50 41 35.12 Changed Copper binding periplasmic protein CusF
CUT PF02376 Domain 43 1470 78.00 38 18.16 Changed CUT domain
Cut12 PF11500 Domain 36 152 146.40 36 20.88 Changed Spindle pole body formation-associated protein
Cut8 PF08559 Family 88 331 232.40 28 68.79 Changed Cut8, nuclear proteasome tether protein
CutA1 PF03091 Family 496 5532 96.70 52 84.13 Changed CutA1 divalent ion tolerance protein
CutC PF03932 Domain 8 7926 199.30 45 85.16 Changed CutC family
Cuticle_1 PF08140 Family 38 90 40.00 45 71.21 Changed Crustacean cuticle protein repeat
Cuticle_2 PF08184 Family 3 3 59.00 95 100.00 Changed Cuticle protein 7 isoform family
Cuticle_3 PF11018 Family 7 179 111.80 30 59.42 Changed Pupal cuticle protein C1
Cuticle_4 PF15955 Family 31 156 88.80 40 61.96 New Cuticle protein
Cutinase PF01083 Domain 15 15315 171.20 39 73.43 Changed Cutinase
CUTL PF16557 Domain 5 186 71.30 86 10.11 New CUT1-like DNA-binding domain of SATB
Cu_amine_oxid PF01179 Domain 339 4020 385.70 42 56.73 Changed Copper amine oxidase, enzyme domain
Cu_amine_oxidN1 PF07833 Domain 118 6356 87.20 22 19.06 Changed Copper amine oxidase N-terminal domain
Cu_amine_oxidN2 PF02727 Domain 9 3181 87.30 37 12.09 Changed Copper amine oxidase, N2 domain
Cu_amine_oxidN3 PF02728 Domain 12 3086 101.70 40 14.10 Changed Copper amine oxidase, N3 domain
Cu_bind_like PF02298 Domain 15 2587 82.10 31 45.13 Changed Plastocyanin-like domain
CVNH PF08881 Domain 136 604 104.90 24 54.56 Changed CVNH domain
CWC25 PF12542 Family 128 560 92.70 31 22.25 Changed Pre-mRNA splicing factor
cwf18 PF08315 Family 151 544 131.70 33 66.01 Changed cwf18 pre-mRNA splicing factor
cwf21 PF08312 Domain 178 874 46.90 38 7.30 Changed cwf21 domain
CwfJ_C_1 PF04677 Family 8 1088 126.00 28 20.91 Changed Protein similar to CwfJ C-terminus 1
CwfJ_C_2 PF04676 Family 165 1022 99.70 27 16.41 Changed Protein similar to CwfJ C-terminus 2
Cwf_Cwc_15 PF04889 Family 109 690 207.20 38 93.50 Changed Cwf15/Cwc15 cell cycle control protein
CW_binding_1 PF01473 Repeat 213 54047 18.60 38 17.01 Changed Putative cell wall binding repeat
CW_binding_2 PF04122 Repeat 976 22805 88.40 27 42.53 Changed Putative cell wall binding repeat 2
CX PF01705 Family 66 168 58.10 29 23.60 Changed CX module
CX9C PF16860 Domain 39 234 43.80 29 42.64 New CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
CXCL17 PF15211 Family 12 34 80.30 63 72.36 Changed VEGF co-regulated chemokine 1
CXCR4_N PF12109 Domain 8 119 32.40 79 9.28 Changed CXCR4 Chemokine receptor N terminal
CXCXC PF03128 Repeat 39 307 12.70 51 7.22 Changed CXCXC repeat
CxxCxxCC PF03692 Family 35 16252 84.20 28 58.63 Changed Putative zinc- or iron-chelating domain
Cyanate_lyase PF02560 Domain 76 2834 69.20 70 44.85 Changed Cyanate lyase C-terminal domain
CybS PF05328 Family 36 639 126.10 31 71.27 Changed CybS, succinate dehydrogenase cytochrome B small subunit
Cyc-maltodext_C PF10438 Domain 99 495 76.70 36 13.04 Changed Cyclo-malto-dextrinase C-terminal domain
Cyc-maltodext_N PF09087 Domain 91 465 86.30 43 13.89 Changed Cyclomaltodextrinase, N-terminal
Cyclase PF04199 Family 448 11742 167.00 33 64.59 Changed Putative cyclase
Cyclase_polyket PF04673 Family 43 183 95.40 46 86.27 Changed Polyketide synthesis cyclase
Cyclin PF08613 Family 6 2480 148.60 22 37.18 Changed Cyclin
Cyclin_C PF02984 Domain 239 5338 116.10 19 27.82 Changed Cyclin, C-terminal domain
Cyclin_C_2 PF16899 Domain 90 718 109.20 27 31.07 New Cyclin C-terminal domain
Cyclin_N PF00134 Domain 95 10953 124.10 20 30.95 Changed Cyclin, N-terminal domain
Cyclin_N2 PF16500 Family 16 104 129.00 37 31.29 New N-terminal region of cyclin_N
Cyclophil_like PF04126 Family 13 463 112.10 22 72.79 Changed Cyclophilin-like
Cyclotide PF03784 Domain 30 278 29.70 56 44.14 Changed Cyclotide family
Cyd_oper_YbgE PF09600 Family 45 4240 78.00 64 82.13 Changed Cyd operon protein YbgE (Cyd_oper_YbgE)
CYLD_phos_site PF16607 Disordered 7 92 150.30 70 17.36 New Phosphorylation region of CYLD, unstructured
Cylicin_N PF15241 Family 26 84 105.30 51 23.18 Changed Cylicin N-terminus
CymA PF16941 Family 2 245 338.40 81 99.26 New Putative cyclodextrin porin
Cypo_polyhedrin PF05865 Family 1 14 247.00 95 99.77 Changed Cypovirus polyhedrin protein
CysG_dimeriser PF10414 Domain 197 6612 58.10 43 13.03 Changed Sirohaem synthase dimerisation region
Cystatin PF00031 Domain 35 2480 88.60 18 51.85 Changed Cystatin domain
CYSTM PF12734 Family 86 587 51.80 32 57.31 Changed Cysteine-rich TM module stress tolerance
Cys_knot PF00007 Domain 24 1788 91.20 27 42.88 Changed Cystine-knot domain
Cys_Met_Meta_PP PF01053 Domain 28 52609 365.70 36 94.99 Changed Cys/Met metabolism PLP-dependent enzyme
Cys_rich_CPCC PF14206 Family 34 631 63.20 40 70.29 Changed Cysteine-rich CPCC
Cys_rich_CPXG PF14255 Family 80 1069 50.80 44 81.39 Changed Cysteine-rich CPXCG
Cys_rich_CWC PF14375 Family 62 979 49.40 39 61.84 Changed Cysteine-rich CWC
Cys_rich_FGFR PF00839 Family 73 2806 58.90 23 72.51 Changed Cysteine rich repeat
Cys_rich_KTR PF14205 Family 19 342 51.60 56 66.70 Changed Cysteine-rich KTR
Cys_rich_VLP PF14194 Family 23 416 54.90 53 42.71 Changed Cysteine-rich VLP
Cyt-b5 PF00173 Domain 92 12139 84.00 26 17.33 Changed Cytochrome b5-like Heme/Steroid binding domain
CytadhesinP1 PF12378 Family 8 166 71.00 39 13.19 Changed Trypsin-sensitive surface-exposed protein
Cytadhesin_P30 PF07271 Family 2 147 148.90 64 73.72 Changed Cytadhesin P30/P32
CytB6-F_Fe-S PF08802 Domain 10 436 36.90 43 19.92 Changed Cytochrome B6-F complex Fe-S subunit
CYTH PF01928 Domain 51 16828 183.10 29 59.05 Changed CYTH domain
Cytidylate_kin PF02224 Domain 12 18453 211.20 46 91.13 Changed Cytidylate kinase
Cytidylate_kin2 PF13189 Domain 165 2607 170.10 29 75.65 Changed Cytidylate kinase-like family
CYTL1 PF15153 Family 11 72 121.40 54 91.47 Changed Cytokine-like protein 1
CytochromB561_N PF09786 Family 17 312 425.50 27 83.50 Changed Cytochrome B561, N terminal
Cytochrome-c551 PF10643 Family 5 16 191.90 46 83.56 Changed Photosystem P840 reaction-centre cytochrome c-551
Cytochrome_B PF00033 Domain 92 32657 170.50 21 86.68 Changed Cytochrome b/b6/petB
Cytochrome_C554 PF13435 Family 93 1573 121.20 16 24.63 Changed Cytochrome c554 and c-prime
Cytochrome_C7 PF14522 Family 82 1023 74.00 30 25.95 Changed Cytochrome c7
Cytochrome_cB PF11783 Family 58 167 168.80 37 32.68 Changed Cytochrome c bacterial
Cytochrome_CBB3 PF13442 Domain 171 28539 79.60 24 32.39 Changed Cytochrome C oxidase, cbb3-type, subunit III
Cytochrome_P460 PF16694 Domain 78 426 125.40 27 66.64 New Cytochrome P460
Cytochrom_B558a PF05038 Family 8 112 158.10 58 90.06 Changed Cytochrome Cytochrome b558 alpha-subunit
Cytochrom_B559 PF00283 Family 17 2974 28.60 56 46.83 Changed Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
Cytochrom_B559a PF00284 Family 40 1584 38.70 81 48.13 Changed Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrom_B561 PF03188 Family 39 2793 130.10 21 40.38 Changed Eukaryotic cytochrome b561
Cytochrom_B562 PF07361 Family 49 4827 103.40 53 81.77 Changed Cytochrome b562
Cytochrom_B_C PF00032 Domain 197 95856 89.70 71 27.89 Changed Cytochrome b(C-terminal)/b6/petD
Cytochrom_B_N_2 PF13631 Domain 33 135766 146.70 63 51.22 Changed Cytochrome b(N-terminal)/b6/petB
Cytochrom_C PF00034 Domain 67 28796 97.40 19 35.45 Changed Cytochrome c
Cytochrom_C1 PF02167 Family 60 3510 200.90 32 73.76 Changed Cytochrome C1 family
Cytochrom_c3_2 PF14537 Family 50 620 87.20 26 34.66 Changed Cytochrome c3
Cytochrom_C550 PF14495 Domain 27 237 133.30 49 81.42 Changed Cytochrome c-550 domain
Cytochrom_C552 PF02335 Family 26 3996 412.70 68 89.90 Changed Cytochrome c552
Cytochrom_CIII PF02085 Domain 24 640 93.30 20 48.73 Changed Class III cytochrome C family
Cytochrom_C_2 PF01322 Domain 147 1656 115.90 26 74.96 Changed Cytochrome C'
Cytochrom_C_asm PF01578 Family 39 32696 210.60 23 55.65 Changed Cytochrome C assembly protein
Cytochrom_D1 PF02239 Domain 8 12769 214.10 51 90.97 Changed Cytochrome D1 heme domain
Cytochrom_NNT PF03264 Family 70 10194 170.70 51 58.33 Changed NapC/NirT cytochrome c family, N-terminal region
CytoC_RC PF02276 Family 18 141 241.80 33 79.54 Changed Photosynthetic reaction centre cytochrome C subunit
Cytokin-bind PF09265 Domain 84 613 231.00 36 52.37 Changed Cytokinin dehydrogenase 1, FAD and cytokinin binding
Cytokin_check_N PF10407 Family 39 129 70.00 37 6.99 Changed Cdc14 phosphatase binding protein N-terminus
Cytomega_gL PF01801 Family 3 100 204.70 53 80.68 Changed Cytomegalovirus glycoprotein L
Cytomega_TRL10 PF06084 Family 5 31 146.90 87 85.32 Changed Cytomegalovirus TRL10 protein
Cytomega_UL20A PF05984 Family 1 23 102.30 86 97.88 Changed Cytomegalovirus UL20A protein
Cytomega_UL84 PF06284 Family 1 65 422.00 59 96.25 Changed Cytomegalovirus UL84 protein
Cytomega_US3 PF05963 Family 2 74 179.90 53 97.28 Changed Cytomegalovirus US3 protein
Cytotoxic PF09000 Domain 7 340 79.20 53 20.39 Changed Cytotoxic
Cyto_heme_lyase PF01265 Family 60 965 230.80 36 83.39 Changed Cytochrome c/c1 heme lyase
Cyt_bd_oxida_I PF01654 Family 651 22595 450.20 41 93.88 Changed Cytochrome bd terminal oxidase subunit I
Cyt_bd_oxida_II PF02322 Family 733 22347 332.20 34 94.54 Changed Cytochrome bd terminal oxidase subunit II
Cyt_c_ox_IV PF12270 Family 54 2248 136.70 74 98.53 Changed Cytochrome c oxidase subunit IV
CZB PF13682 Domain 397 4156 67.10 36 18.63 Changed Chemoreceptor zinc-binding domain
CzcE PF16986 Domain 15 77 77.70 33 63.38 New Heavy-metal resistance protein CzcE
C_GCAxxG_C_C PF09719 Family 398 2568 117.70 29 78.60 Changed Putative redox-active protein (C_GCAxxG_C_C)
C_Hendra PF16821 Family 9 21 151.80 26 92.24 New C protein from hendra and measles viruses
C_tripleX PF02363 Repeat 166 2610 17.40 38 37.00 Changed Cysteine rich repeat
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