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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
C-C_Bond_Lyase PF15617 Family 68 232 317.70 41 89.34 Changed C-C_Bond_Lyase of the TIM-Barrel fold
c-SKI_SMAD_bind PF08782 Domain 42 412 91.60 46 14.13 Changed c-SKI Smad4 binding domain
C1-set PF07654 Domain 71 5062 84.20 25 34.13 Changed Immunoglobulin C1-set domain
C1-set_C PF16196 Family 30 291 50.50 47 20.32 Changed C1-set C-terminal domain
C1q PF00386 Domain 32 2794 123.60 28 33.59 Changed C1q domain
C1_1 PF00130 Domain 44 8266 52.70 30 7.86 Changed Phorbol esters/diacylglycerol binding domain (C1 domain)
C1_2 PF03107 Domain 220 5454 48.40 30 31.83 Changed C1 domain
C1_4 PF07975 Domain 11 440 55.20 42 12.14 Changed TFIIH C1-like domain
C2 PF00168 Domain 261 39609 106.00 18 20.55 Changed C2 domain
C2-C2_1 PF11618 Domain 49 242 138.60 32 12.11 Changed First C2 domain of RPGR-interacting protein 1
C2-set PF05790 Domain 27 218 81.00 27 25.37 Changed Immunoglobulin C2-set domain
C2-set_2 PF08205 Domain 27 4075 86.40 17 18.53 Changed CD80-like C2-set immunoglobulin domain
C4 PF01413 Domain 160 1329 106.20 47 14.57 Changed C-terminal tandem repeated domain in type 4 procollagen
C5-epim_C PF06662 Family 16 220 181.20 42 35.05 Changed D-glucuronyl C5-epimerase C-terminus
C6 PF01681 Family 113 280 92.50 19 51.36 Changed C6 domain
C6_DPF PF10170 Domain 35 122 90.60 41 54.82 Changed Cysteine-rich domain
C8 PF08742 Domain 928 3548 67.70 31 10.12 Changed C8 domain
C9orf72-like PF15019 Family 24 145 227.00 37 45.67 Changed C9orf72-like protein family
Caa3_CtaG PF09678 Family 277 829 232.60 25 60.21 Changed Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CAAD PF14159 Domain 124 554 81.40 37 36.20 Changed CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
CAAP1 PF15335 Family 30 125 61.30 45 15.80 Changed Caspase activity and apoptosis inhibitor 1
CaATP_NAI PF12515 Family 35 529 44.30 52 4.67 Changed Ca2+-ATPase N terminal autoinhibitory domain
CAAX_1 PF15895 Family 2 7 209.10 73 98.19 Changed CAAX box cerebral protein 1
CABIT PF12736 Domain 44 488 236.60 21 48.16 Changed Cell-cycle sustaining, positive selection,
CABS1 PF15367 Family 12 33 357.60 64 89.74 Changed Calcium-binding and spermatid-specific protein 1
CAC1F_C PF16885 Family 9 438 292.10 26 19.53 Changed Voltage-gated calcium channel subunit alpha, C-term
Cache_3-Cache_2 PF17201 Domain 36 237 229.40 20 35.85 Changed Cache 3/Cache 2 fusion domain
CactinC_cactus PF09732 Domain 54 577 124.80 65 21.43 Changed Cactus-binding C-terminus of cactin protein
Cactin_mid PF10312 Family 129 583 179.70 34 31.22 Changed Conserved mid region of cactin
Cad PF03596 Family 4 315 184.70 33 85.30 Changed Cadmium resistance transporter
Cadherin PF00028 Domain 55 50555 93.10 24 44.52 Changed Cadherin domain
Cadherin-like PF12733 Domain 63 885 91.30 23 15.54 Changed Cadherin-like beta sandwich domain
Cadherin_2 PF08266 Domain 49 2476 82.50 36 9.29 Changed Cadherin-like
Cadherin_3 PF16184 Domain 104 5863 111.90 21 42.14 Changed Cadherin-like
Cadherin_C PF01049 Family 116 1815 141.20 36 15.24 Changed Cadherin cytoplasmic region
Cadherin_C_2 PF16492 Family 144 1345 88.00 32 10.49 Changed Cadherin cytoplasmic C-terminal
Cadherin_pro PF08758 Domain 16 445 80.70 30 10.03 Changed Cadherin prodomain like
Cadherin_tail PF15974 Family 7 413 126.90 48 13.88 Changed Cadherin C-terminal cytoplasmic tail, catenin-binding region
Caenor_Her-1 PF09232 Domain 7 33 115.90 30 71.13 Changed Caenorhabditis elegans Her-1
Caerin_1 PF07440 Family 2 0 0.00 0 0.00 Changed Caerin 1 protein
CAF-1_p150 PF11600 Family 5 93 146.10 52 18.54 Changed Chromatin assembly factor 1 complex p150 subunit, N-terminal
CAF-1_p60_C PF15512 Domain 19 65 151.80 43 29.15 Changed Chromatin assembly factor complex 1 subunit p60, C-terminal
CAF1 PF04857 Family 164 2852 185.10 18 64.44 Changed CAF1 family ribonuclease
CAF1-p150_C2 PF15539 Domain 6 87 252.60 41 30.28 Changed CAF1 complex subunit p150, region binding to CAF1-p60 at C-term
CAF1-p150_N PF15557 Domain 8 65 205.40 38 23.67 Changed CAF1 complex subunit p150, region binding to PCNA
CAF1A PF12253 Family 159 590 76.30 38 10.52 Changed Chromatin assembly factor 1 subunit A
CAF1C_H4-bd PF12265 Family 265 1690 70.00 33 15.26 Changed Histone-binding protein RBBP4 or subunit C of CAF1 complex
CAF20 PF17052 Family 25 46 148.70 44 93.09 Changed Cap associated factor
Caf4 PF11615 Family 2 8 62.00 78 9.50 Changed CCR4-associated factor 4
Cag12 PF13117 Family 8 13 107.80 26 66.62 Changed Cag pathogenicity island protein Cag12
CagA PF03507 Family 1 1 190.00 100 16.02 Changed CagA exotoxin
CagD PF16567 Domain 1 1 205.00 100 99.03 Changed Pathogenicity island component CagD
CAGE1 PF15066 Family 14 70 329.60 45 60.33 Changed Cancer-associated gene protein 1 family
CagE_TrbE_VirB PF03135 Family 11 578 190.80 22 23.98 Changed CagE, TrbE, VirB family, component of type IV transporter system
CagS PF16707 Family 1 1 196.00 100 100.00 Changed Cag pathogenicity island protein S of Helicobacter pylori
CagX PF03524 Family 147 598 212.40 26 64.07 Changed Conjugal transfer protein
CagY_I PF14585 Repeat 2 3 65.00 89 10.12 Changed CagY type 1 repeat
CagY_M PF07337 Repeat 8 29 31.60 49 38.91 Changed DC-EC Repeat
CagZ PF09053 Domain 1 1 199.00 100 100.00 Changed CagZ
CaiF_GrlA PF07180 Family 2 23 98.20 39 72.36 Changed CaiF/GrlA transcriptional regulator
CaKB PF03185 Family 34 279 173.10 37 74.77 Changed Calcium-activated potassium channel, beta subunit
Calcipressin PF04847 Family 6 578 181.00 33 74.81 Changed Calcipressin
Calci_bind_CcbP PF11535 Family 21 91 97.40 34 69.61 Changed Calcium binding
CALCOCO1 PF07888 Coiled-coil 11 350 308.20 33 58.20 Changed Calcium binding and coiled-coil domain (CALCOCO1) like
Calcyon PF06387 Family 14 179 158.10 53 86.65 Changed D1 dopamine receptor-interacting protein (calcyon)
Calc_CGRP_IAPP PF00214 Family 66 324 115.10 28 83.13 Changed Calcitonin / CGRP / IAPP family
Caldesmon PF02029 Disordered 16 238 323.10 32 79.84 Changed Caldesmon
Caleosin PF05042 Family 123 650 152.20 44 65.80 Changed Caleosin related protein
Calici_coat PF00915 Family 4 7 265.90 28 17.13 Changed Calicivirus coat protein
Calici_coat_C PF08435 Family 29 1 224.00 100 42.26 Changed Calicivirus coat protein C-terminal
Calici_MSP PF05752 Family 1 2 129.00 23 89.27 Changed Calicivirus minor structural protein
Calici_PP_N PF08405 Family 1 1 358.00 100 20.01 Changed Viral polyprotein N-terminal
Calmodulin_bind PF07887 Family 76 862 252.90 41 49.46 Changed Calmodulin binding protein-like
CALM_bind PF16025 Family 35 136 82.40 29 11.06 Changed Calcium-dependent calmodulin binding
Calpain_III PF01067 Domain 172 1985 130.80 28 17.35 Changed Calpain large subunit, domain III
Calpain_inhib PF00748 Family 53 428 133.80 33 75.71 Changed Calpain inhibitor
Calpain_u2 PF16648 Disordered 10 64 67.90 64 8.58 Changed Unstructured region on Calpain-3
Calponin PF00402 Repeat 71 1708 24.10 57 19.40 Changed Calponin family repeat
Calreticulin PF00262 Family 115 2105 214.80 33 66.14 Changed Calreticulin family
Calsarcin PF05556 Family 35 245 254.30 35 80.63 Changed Calcineurin-binding protein (Calsarcin)
Calsequestrin PF01216 Family 2 229 326.30 51 91.43 Changed Calsequestrin
Calx-beta PF03160 Domain 32 7291 96.10 21 22.25 Changed Calx-beta domain
Calycin_like PF13944 Domain 53 112 124.70 18 37.69 Changed Calycin-like beta-barrel domain
CaM-KIIN PF15170 Family 7 74 74.80 71 97.07 Changed Calcium/calmodulin-dependent protein kinase II inhibitor
CaMBD PF02888 Family 35 468 72.40 57 12.91 Changed Calmodulin binding domain
CaMKII_AD PF08332 Domain 5 700 122.10 53 29.57 Changed Calcium/calmodulin dependent protein kinase II association domain
CAML PF14963 Family 15 75 227.00 55 66.23 Changed Calcium signal-modulating cyclophilin ligand
Campylo_MOMP PF05538 Family 4 29 398.40 25 97.55 Changed Campylobacter major outer membrane protein
CAMP_factor PF07373 Family 9 24 210.00 29 67.91 Changed CAMP factor (Cfa)
CamS PF07537 Family 51 173 299.20 31 82.80 Changed CamS sex pheromone cAM373 precursor
CAMSAP_CC1 PF17095 Family 40 469 62.00 48 4.12 Changed Spectrin-binding region of Ca2+-Calmodulin
CAMSAP_CH PF11971 Domain 19 673 81.70 36 6.37 Changed CAMSAP CH domain
CAMSAP_CKK PF08683 Domain 26 556 116.50 57 8.49 Changed Microtubule-binding calmodulin-regulated spectrin-associated
CaM_bdg_C0 PF10562 Domain 8 129 29.00 66 3.19 Changed Calmodulin-binding domain C0 of NMDA receptor NR1 subunit
CaM_binding PF07839 Domain 58 438 108.50 29 21.25 Changed Plant calmodulin-binding domain
Candida_ALS PF05792 Repeat 477 2005 32.50 37 33.78 Changed Candida agglutinin-like (ALS)
Candida_ALS_N PF11766 Domain 82 117 246.90 32 25.52 Changed Cell-wall agglutinin N-terminal ligand-sugar binding
CAP PF00188 Domain 94 8466 122.60 18 44.76 Changed Cysteine-rich secretory protein family
CAP-ZIP_m PF15255 Family 15 184 129.00 36 14.86 Changed WASH complex subunit CAP-Z interacting, central region
CAP160 PF07918 Repeat 9 79 26.40 68 6.64 Changed CAP160 repeat
CAP18_C PF12153 Domain 11 31 27.90 49 16.33 Changed LPS binding domain of CAP18 (C terminal)
CAP59_mtransfer PF11735 Family 204 677 241.90 32 50.23 Changed Cryptococcal mannosyltransferase 1
Caprin-1_C PF12287 Family 31 183 265.90 47 38.01 Changed Cytoplasmic activation/proliferation-associated protein-1 C term
Capsid-VNN PF11729 Family 1 1 340.00 100 100.00 Changed nodavirus capsid protein
Capsid_N PF16903 Domain 8 37 190.30 20 41.87 Changed Major capsid protein N-terminus
Capsid_NCLDV PF04451 Domain 17 32 201.40 23 38.83 Changed Large eukaryotic DNA virus major capsid protein
Capsid_VP7 PF17071 Family 2 2 274.50 30 100.00 Changed Outer capsid protein VP7
Capsule_synth PF05159 Family 7 796 199.90 17 59.80 Changed Capsule polysaccharide biosynthesis protein
Caps_assemb_Wzi PF14052 Family 38 311 429.00 14 85.59 Changed Capsule assembly protein Wzi
Caps_synth PF05704 Family 28 289 214.60 21 54.95 Changed Capsular polysaccharide synthesis protein
Caps_synth_CapC PF14102 Family 60 137 118.70 27 51.45 Changed Capsule biosynthesis CapC
Caps_synth_GfcC PF06251 Family 9 221 211.70 19 32.90 Changed Capsule biosynthesis GfcC
CAP_assoc_N PF14504 Domain 53 163 136.90 24 36.86 Changed CAP-associated N-terminal
CAP_C PF08603 Family 172 768 153.00 37 32.46 Changed Adenylate cyclase associated (CAP) C terminal
CAP_GLY PF01302 Domain 801 3896 67.00 37 10.25 Changed CAP-Gly domain
CAP_N PF01213 Family 177 784 266.80 33 58.17 Changed Adenylate cyclase associated (CAP) N terminal
Carbam_trans_C PF16861 Domain 203 636 170.30 43 29.58 Changed Carbamoyltransferase C-terminus
Carbam_trans_N PF02543 Domain 6 708 288.80 28 55.75 Changed Carbamoyltransferase N-terminus
CarbopepD_reg_2 PF13715 Domain 109 10293 83.80 30 9.06 Changed CarboxypepD_reg-like domain
Carboxyl_trans PF01039 Family 30 7194 396.00 26 60.88 Changed Carboxyl transferase domain
CarboxypepD_reg PF13620 Domain 403 6133 80.90 21 11.86 Changed Carboxypeptidase regulatory-like domain
CarbpepA_inh PF02977 Domain 7 17 42.90 35 54.44 Changed Carboxypeptidase A inhibitor
Carbpep_Y_N PF05388 Family 16 190 104.60 30 19.22 Changed Carboxypeptidase Y pro-peptide
Carb_anhydrase PF00194 Domain 389 3776 213.70 25 64.60 Changed Eukaryotic-type carbonic anhydrase
Carb_bind PF10645 Domain 31 61 48.30 43 15.01 Changed Carbohydrate binding
Carb_kinase PF01256 Family 9 3015 240.80 27 57.29 Changed Carbohydrate kinase
Carcinustatin PF08261 Family 2 0 0.00 0 0.00 Changed Carcinustatin peptide
CARD PF00619 Domain 49 1794 84.20 21 14.35 Changed Caspase recruitment domain
CARDB PF07705 Domain 42 1336 106.90 19 16.66 Changed CARDB
CARD_2 PF16739 Domain 54 310 90.00 25 18.47 Changed Caspase recruitment domain
CarD_CdnL_TRCF PF02559 Family 959 3367 100.90 29 12.24 Changed CarD-like/TRCF domain
Carla_C4 PF01623 Family 10 1 90.00 100 83.33 Changed Carlavirus putative nucleic acid binding protein
CARM1 PF11531 Family 7 106 90.10 54 17.52 Changed Coactivator-associated arginine methyltransferase 1 N terminal
CARMIL_C PF16000 Family 36 320 235.50 28 21.77 Changed CARMIL C-terminus
Carmo_coat_C PF08462 Family 8 1 99.00 100 28.45 Changed Carmovirus coat protein
Carn_acyltransf PF00755 Family 458 2473 489.30 27 74.83 Changed Choline/Carnitine o-acyltransferase
Caroten_synth PF04240 Family 67 289 206.70 24 74.09 Changed Carotenoid biosynthesis protein
Carot_N PF09150 Domain 54 148 146.20 40 66.06 Changed Orange carotenoid protein, N-terminal
CarS-like PF01864 Family 3 200 160.00 30 93.09 Changed CDP-archaeol synthase
CART PF06373 Family 12 88 67.50 69 58.78 Changed Cocaine and amphetamine regulated transcript protein (CART)
Cas1_AcylT PF07779 Domain 23 578 386.60 32 65.71 Changed 10 TM Acyl Transferase domain found in Cas1p
Cas6 PF09559 Family 35 54 195.40 33 90.42 Changed Cas6 Crispr
Cas9-BH PF16593 Family 43 92 33.60 45 2.55 Changed Bridge helix of CRISPR-associated endonuclease Cas9
Cas9_PI PF16595 Domain 47 81 255.60 22 20.36 Changed PAM-interacting domain of CRISPR-associated endonuclease Cas9
Cas9_REC PF16592 Domain 13 90 495.80 28 40.90 Changed REC lobe of CRISPR-associated endonuclease Cas9
Casc1 PF12366 Family 19 133 226.20 21 35.05 Changed Cancer susceptibility candidate 1
Casc1_N PF15927 Family 40 213 195.10 22 26.01 Changed Cancer susceptibility candidate 1 N-terminus
Casein PF00363 Family 19 74 80.70 25 39.94 Changed Casein
Casein_kappa PF00997 Family 15 36 155.90 54 77.17 Changed Kappa casein
Caskin-Pro-rich PF16907 Family 17 134 89.20 54 7.04 Changed Proline rich region of Caskin proteins
Caskin-tail PF16632 Disordered 18 140 59.30 64 4.79 Changed C-terminal region of Caskin
Caskin1-CID PF16600 Family 9 89 50.70 64 4.23 Changed Caskin1 CASK-interaction domain
CASP_C PF08172 Family 96 482 228.60 33 35.41 Changed CASP C terminal
Cass2 PF14526 Domain 33 702 148.50 17 66.86 Changed Integron-associated effector binding protein
Cast PF10174 Family 13 674 327.30 27 56.58 Changed RIM-binding protein of the cytomatrix active zone
Castor_Poll_mid PF06241 Family 13 395 100.90 38 13.35 Changed Castor and Pollux, part of voltage-gated ion channel
Cas_APE2256 PF09651 Family 20 97 135.10 25 38.23 Changed CRISPR-associated protein (Cas_APE2256)
Cas_Cas02710 PF09670 Family 8 96 259.50 15 69.93 Changed CRISPR-associated protein (Cas_Cas02710)
Cas_Cas1 PF01867 Family 401 1743 234.60 21 76.50 Changed CRISPR associated protein Cas1
Cas_Cas2CT1978 PF09707 Family 79 207 84.30 41 66.74 Changed CRISPR-associated protein (Cas_Cas2CT1978)
Cas_Cas4 PF01930 Family 43 1031 160.20 21 36.12 Changed Domain of unknown function DUF83
Cas_Cas5d PF09704 Family 51 810 201.80 17 84.20 Changed CRISPR-associated protein (Cas_Cas5)
Cas_Cas6 PF01881 Family 138 343 147.60 19 60.22 Changed CRISPR associated protein Cas6
Cas_Cas7 PF05107 Family 135 470 261.80 32 90.03 Changed CRISPR-associated protein Cas7
Cas_Cmr3 PF09700 Family 19 187 322.10 16 86.46 Changed CRISPR-associated protein (Cas_Cmr3)
Cas_Cmr5 PF09701 Family 56 124 118.40 22 85.98 Changed CRISPR-associated protein (Cas_Cmr5)
Cas_Csa4 PF09703 Family 6 9 355.70 22 94.37 Changed CRISPR-associated protein (Cas_Csa4)
Cas_Csa5 PF09702 Family 5 9 96.00 34 73.47 Changed CRISPR-associated protein (Cas_Csa5)
Cas_Csd1 PF09709 Family 131 310 559.60 24 96.43 Changed CRISPR-associated protein (Cas_Csd1)
CAS_CSE1 PF03378 Family 15 665 388.60 29 44.35 Changed CAS/CSE protein, C-terminus
Cas_Csm6 PF09659 Family 7 55 283.60 19 84.71 Changed CRISPR-associated protein (Cas_Csm6)
Cas_Csn2 PF09711 Family 11 81 173.40 20 80.81 Changed CRISPR-associated protein (Cas_Csn2)
Cas_csx3 PF09620 Family 18 41 77.60 30 37.70 Changed CRISPR-associated protein (Cas_csx3)
Cas_Csx8 PF09657 Family 2 17 304.40 28 96.37 Changed CRISPR-associated protein Csx8 (Cas_Csx8)
Cas_Csx9 PF09658 Family 2 2 377.00 90 94.49 Changed CRISPR-associated protein (Cas_Csx9)
Cas_Csy1 PF09611 Family 38 85 319.10 28 81.79 Changed CRISPR-associated protein (Cas_Csy1)
Cas_Csy2 PF09614 Family 44 87 277.70 32 89.21 Changed CRISPR-associated protein (Cas_Csy2)
Cas_Csy3 PF09615 Family 42 85 323.90 50 96.90 Changed CRISPR-associated protein (Cas_Csy3)
Cas_Csy4 PF09618 Family 50 97 180.20 31 96.28 Changed CRISPR-associated protein (Cas_Csy4)
Cas_CT1975 PF09344 Family 67 263 356.30 32 95.37 Changed CT1975-like protein
Cas_CXXC_CXXC PF09706 Domain 6 59 64.60 25 12.37 Changed CRISPR-associated protein (Cas_CXXC_CXXC)
Cas_DxTHG PF09455 Family 70 163 364.40 14 83.85 Changed CRISPR-associated (Cas) DxTHG family
Cas_GSU0053 PF09617 Family 28 58 173.10 28 46.91 Changed CRISPR-associated protein GSU0053 (Cas_GSU0053)
Cas_GSU0054 PF09609 Family 2 26 294.70 20 65.95 Changed CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
Cas_NE0113 PF09623 Family 12 75 197.70 24 55.38 Changed CRISPR-associated protein NE0113 (Cas_NE0113)
Cas_St_Csn2 PF16813 Domain 4 20 287.60 23 97.92 Changed CRISPR-associated protein Csn2 subfamily St
Cas_TM1802 PF09484 Family 31 108 482.00 15 89.21 Changed CRISPR-associated protein TM1802 (cas_TM1802)
Cas_VVA1548 PF09652 Domain 14 26 90.10 37 57.11 Changed Putative CRISPR-associated protein (Cas_VVA1548)
CAT PF00302 Domain 8 378 193.80 26 94.01 Changed Chloramphenicol acetyltransferase
Catalase PF00199 Domain 413 3472 349.60 43 67.12 Changed Catalase
Catalase-rel PF06628 Family 687 2879 64.50 24 11.55 Changed Catalase-related immune-responsive
Cathelicidins PF00666 Domain 8 188 95.50 38 57.46 Changed Cathelicidin
CathepsinC_exc PF08773 Domain 35 217 127.60 31 25.27 Changed Cathepsin C exclusion domain
Cation_ATPase PF13246 Family 105 8137 106.80 24 9.45 Changed Cation transport ATPase (P-type)
Cation_ATPase_C PF00689 Family 135 9305 181.10 23 18.74 Changed Cation transporting ATPase, C-terminus
Cation_ATPase_N PF00690 Domain 137 10404 66.10 24 6.81 Changed Cation transporter/ATPase, N-terminus
Cation_efflux PF01545 Family 65 9934 205.50 20 54.88 Changed Cation efflux family
CATSPERB PF15149 Family 13 52 417.20 49 51.10 Changed Cation channel sperm-associated protein subunit beta protein family
CATSPERD PF15020 Family 11 115 402.20 29 66.37 Changed Cation channel sperm-associated protein subunit delta
CATSPERG PF15064 Family 3 99 492.80 41 81.53 Changed Cation channel sperm-associated protein subunit gamma
CAT_RBD PF03123 Domain 218 731 56.10 35 20.27 Changed CAT RNA binding domain
Caudal_act PF04731 Family 30 151 130.40 37 49.91 Changed Caudal like protein activation region
Caudo_bapla16 PF16792 Domain 9 1 372.00 100 99.20 Changed Phage tail base-plate attachment protein of Caudovirales ORF16
Caudo_bapla_RBP PF08931 Domain 6 1 264.00 100 100.00 Changed Receptor-binding protein of phage tail base-plate Siphoviridae, head
Caudo_TAP PF02413 Family 33 206 122.60 26 71.53 Changed Caudovirales tail fibre assembly protein, lambda gpK
Caud_tail_N PF16838 Domain 2 6 108.70 23 9.56 Changed Caudoviral major tail protein N-terminus
Cauli_AT PF03233 Family 6 2 154.50 15 61.68 Changed Aphid transmission protein
Cauli_DNA-bind PF03310 Family 3 4 99.80 19 61.38 Changed Caulimovirus DNA-binding protein
Cauli_VI PF01693 Family 306 1564 43.70 35 15.41 Changed Caulimovirus viroplasmin
Caveolin PF01146 Family 39 336 130.30 41 74.54 Changed Caveolin
CAV_VP3 PF04771 Family 1 1 121.00 100 100.00 Changed Chicken anaemia virus VP-3 protein
Ca_chan_IQ PF08763 Domain 48 935 76.20 55 4.19 Changed Voltage gated calcium channel IQ domain
Ca_hom_mod PF14798 Family 79 385 229.60 34 75.28 Changed Calcium homeostasis modulator
CBAH PF02275 Domain 8 1051 268.50 22 78.57 Changed Linear amide C-N hydrolases, choloylglycine hydrolase family
CbbQ_C PF08406 Family 137 502 84.00 29 28.93 Changed CbbQ/NirQ/NorQ C-terminal
CbeA_antitoxin PF06154 Family 11 29 97.90 62 87.11 Changed CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A
CBF PF03914 Family 398 1737 172.40 25 23.05 Changed CBF/Mak21 family
CBFB_NFYA PF02045 Family 68 1180 56.60 66 19.61 Changed CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
CBFD_NFYB_HMF PF00808 Domain 27 4936 64.30 30 30.28 Changed Histone-like transcription factor (CBF/NF-Y) and archaeal histone
CBFNT PF08143 Domain 15 118 64.10 43 20.60 Changed CBFNT (NUC161) domain
CBF_beta PF02312 Family 19 183 131.40 44 73.79 Changed Core binding factor beta subunit
CbiA PF01656 Domain 79 5812 209.80 15 56.44 Changed CobQ/CobB/MinD/ParA nucleotide binding domain
CbiC PF02570 Family 421 1089 193.40 40 82.07 Changed Precorrin-8X methylmutase
CbiD PF01888 Family 337 750 257.60 38 67.10 Changed CbiD
CbiG_C PF01890 Domain 484 900 120.20 30 34.55 Changed Cobalamin synthesis G C-terminus
CbiG_mid PF11761 Domain 94 315 92.00 19 21.55 Changed Cobalamin biosynthesis central region
CbiG_N PF11760 Domain 339 736 81.30 42 19.02 Changed Cobalamin synthesis G N-terminal
CbiJ PF02571 Family 351 878 239.00 31 80.70 Changed Precorrin-6x reductase CbiJ/CobK
CbiK PF06180 Family 8 438 252.30 33 82.17 Changed Cobalt chelatase (CbiK)
CbiM PF01891 Family 110 1101 204.50 27 81.81 Changed Cobalt uptake substrate-specific transmembrane region
CbiN PF02553 Family 103 307 69.10 45 65.32 Changed Cobalt transport protein component CbiN
CbiQ PF02361 Family 17 3480 211.00 18 76.88 Changed Cobalt transport protein
CbiX PF01903 Domain 67 2106 103.60 23 63.66 Changed CbiX
CbiZ PF01955 Family 147 300 191.90 29 61.61 Changed Adenosylcobinamide amidohydrolase
CblD PF07434 Family 2 17 340.40 34 80.69 Changed CblD like pilus biogenesis initiator
Cbl_N PF02262 Domain 37 311 115.70 58 16.84 Changed CBL proto-oncogene N-terminal domain 1
Cbl_N2 PF02761 Domain 31 319 81.70 61 11.63 Changed CBL proto-oncogene N-terminus, EF hand-like domain
Cbl_N3 PF02762 Domain 19 304 83.40 77 11.87 Changed CBL proto-oncogene N-terminus, SH2-like domain
CBM-like PF14683 Domain 158 884 176.40 30 29.16 Changed Polysaccharide lyase family 4, domain III
CBM26 PF16738 Domain 77 227 71.10 25 11.41 Changed Starch-binding module 26
CBM27 PF09212 Domain 2 19 170.90 21 16.11 Changed Carbohydrate binding module 27
CBM39 PF15886 Domain 41 172 116.50 24 32.92 Changed Carbohydrate binding domain (family 32)
CBM49 PF09478 Domain 23 398 83.20 27 18.56 Changed Carbohydrate binding domain CBM49
CBM53 PF16760 Family 180 514 84.00 28 21.79 Changed Starch/carbohydrate-binding module (family 53)
CBM60 PF16841 Domain 41 116 92.00 27 16.84 Changed Ca-dependent carbohydrate-binding module xylan-binding
CBM9_1 PF06452 Domain 22 528 179.00 17 25.77 Changed Carbohydrate family 9 binding domain-like
CBM9_2 PF16011 Family 13 163 190.90 29 82.21 Changed Carbohydrate-binding family 9
CBM_1 PF00734 Domain 761 2898 28.70 50 7.30 Changed Fungal cellulose binding domain
CBM_10 PF02013 Domain 92 66 30.00 56 5.66 Changed Cellulose or protein binding domain
CBM_11 PF03425 Family 6 116 172.20 19 22.51 Changed Carbohydrate binding domain (family 11)
CBM_14 PF01607 Domain 152 7844 53.50 23 21.87 Changed Chitin binding Peritrophin-A domain
CBM_15 PF03426 Domain 2 3 169.30 34 28.73 Changed Carbohydrate binding domain (family 15)
CBM_17_28 PF03424 Domain 8 20 181.80 34 40.84 Changed Carbohydrate binding domain (family 17/28)
CBM_19 PF03427 Domain 2 50 60.40 32 12.51 Changed Carbohydrate binding domain (family 19)
CBM_2 PF00553 Domain 14 1558 98.00 32 17.40 Changed Cellulose binding domain
CBM_20 PF00686 Family 54 1934 93.20 23 15.48 Changed Starch binding domain
CBM_21 PF03370 Domain 60 1030 109.60 31 21.47 Changed Carbohydrate/starch-binding module (family 21)
CBM_25 PF03423 Domain 2 127 102.80 37 16.36 Changed Carbohydrate binding domain (family 25)
CBM_26 PF16824 Family 8 27 125.70 41 26.62 Changed C-terminal carbohydrate-binding module
CBM_3 PF00942 Domain 136 286 83.00 25 11.59 Changed Cellulose binding domain
CBM_35 PF16990 Domain 5 382 123.70 25 18.92 Changed Carbohydrate binding module (family 35)
CBM_48 PF02922 Domain 40 5178 85.30 25 11.72 Changed Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CBM_4_9 PF02018 Domain 47 1709 134.60 17 24.40 Changed Carbohydrate binding domain
CBM_5_12 PF02839 Family 42 1274 42.10 32 8.76 Changed Carbohydrate binding domain
CBM_5_12_2 PF14600 Domain 11 70 59.40 45 6.71 Changed Cellulose-binding domain
CBM_6 PF03422 Family 34 1397 121.70 22 17.54 Changed Carbohydrate binding module (family 6)
CBM_X2 PF03442 Domain 67 295 84.70 27 12.92 Changed Carbohydrate binding domain X2
CBP PF12192 Domain 4 29 72.20 31 44.91 Changed Fungal calcium binding protein
CBP4 PF07960 Family 34 247 111.50 31 84.75 Changed CBP4
CBP_BcsF PF11120 Family 9 34 59.50 38 93.27 Changed Cellulose biosynthesis protein BcsF
CBP_BcsG PF11658 Family 32 72 493.00 43 92.96 Changed Cellulose biosynthesis protein BcsG
CBP_BcsN PF17038 Family 1 18 265.30 32 83.25 Changed Cellulose biosynthesis protein BcsN
CBP_BcsO PF17037 Family 2 18 153.40 25 84.88 Changed Cellulose biosynthesis protein BcsO
CBP_BcsQ PF06564 Domain 15 221 203.90 22 58.79 Changed Cellulose biosynthesis protein BcsQ
CBP_BcsR PF10945 Family 11 43 41.90 50 46.61 Changed Cellulose biosynthesis protein BcsR
CBP_BcsS PF17036 Family 20 34 145.60 24 56.39 Changed Cellulose biosynthesis protein BcsS
CBP_CCPA PF17040 Family 1 3 259.30 47 79.71 Changed Cellulose-complementing protein A
CBP_GIL PF10995 Family 20 58 304.60 39 59.17 Changed GGDEF I-site like or GIL domain
CBS PF00571 Domain 840 51814 57.80 19 25.06 Changed CBS domain
CbtA PF09490 Family 91 308 228.60 31 91.56 Changed Probable cobalt transporter subunit (CbtA)
CbtA_toxin PF06755 Family 4 44 101.00 44 75.90 Changed CbtA_toxin of type IV toxin-antitoxin system
CbtB PF09489 Family 27 307 56.10 38 81.39 Changed Probable cobalt transporter subunit (CbtB)
CBX7_C PF17218 Motif 64 383 32.50 51 7.82 New CBX family C-terminal motif
CC PF04942 Domain 41 146 33.00 32 14.76 Changed CC domain
CC190 PF15768 Family 17 43 231.50 48 88.43 Changed Coiled-coil domain-containing protein 190
CC2-LZ PF16516 Domain 25 292 103.70 34 21.78 Changed Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
CC2D2AN-C2 PF15625 Family 45 194 162.10 30 12.49 Changed CC2D2A N-terminal C2 domain
CCAP PF11105 Family 6 40 104.40 33 73.75 Changed Arthropod cardioacceleratory peptide 2a
CCB1 PF12046 Family 62 160 156.70 39 76.81 Changed Cofactor assembly of complex C subunit B
CCB2_CCB4 PF11152 Family 68 252 187.40 33 74.97 Changed Cofactor assembly of complex C subunit B, CCB2/CCB4
CCCAP PF15964 Family 5 174 378.10 28 75.83 Changed Centrosomal colon cancer autoantigen protein family
CCD PF07860 Family 1 2 100.00 93 4.49 Changed WisP family C-Terminal Region
CCD48 PF15799 Family 8 147 240.00 28 97.27 Changed Coiled-coil domain-containing protein 48
CcdA PF07362 Domain 57 219 65.50 25 78.19 Changed Post-segregation antitoxin CcdA
CcdB PF01845 Domain 56 139 96.00 32 94.92 Changed CcdB protein
CCDC-167 PF15188 Coiled-coil 24 73 81.60 46 74.31 Changed Coiled-coil domain-containing protein 167
CCDC106 PF15794 Family 12 134 168.00 36 71.82 Changed Coiled-coil domain-containing protein 106
CCDC117 PF15810 Family 11 62 132.70 54 51.54 Changed Coiled-coil domain-containing protein 117
CCDC14 PF15254 Coiled-coil 15 98 491.60 38 85.88 Changed Coiled-coil domain-containing protein 14
CCDC142 PF14923 Coiled-coil 9 100 355.40 33 54.73 Changed Coiled-coil protein 142
CCDC144C PF14915 Coiled-coil 54 291 234.30 44 25.34 Changed CCDC144C protein coiled-coil region
CCDC154 PF15450 Family 12 68 400.80 43 71.95 Changed Coiled-coil domain-containing protein 154
CCDC158 PF15921 Family 3 100 584.20 47 92.49 Changed Coiled-coil domain-containing protein 158
CCDC168_N PF15804 Repeat 13 165 137.40 17 38.77 Changed Coiled-coil domain-containing protein 168
CCDC23 PF15674 Family 8 56 61.40 70 44.96 Changed Coiled-coil domain-containing protein 23
CCDC24 PF15669 Family 25 103 169.70 31 59.80 Changed Coiled-coil domain-containing protein 24 family
CCDC32 PF14989 Coiled-coil 20 121 131.60 38 66.68 Changed Coiled-coil domain containing 32
CCDC50_N PF15295 Coiled-coil 17 178 121.20 42 27.35 Changed Coiled-coil domain-containing protein 50 N-terminus
CCDC66 PF15236 Coiled-coil 18 131 144.00 35 16.09 Changed Coiled-coil domain-containing protein 66
CCDC71L PF15374 Coiled-coil 14 87 260.00 41 78.35 Changed Coiled-coil domain-containing protein 71L
CCDC73 PF15818 Family 13 85 593.50 45 93.67 Changed Coiled-coil domain-containing protein 73 family
CCDC74_C PF14917 Coiled-coil 13 50 113.90 50 33.74 Changed Coiled coil protein 74, C terminal
CCDC84 PF14968 Coiled-coil 25 187 239.60 29 85.87 Changed Coiled coil protein 84
CCDC85 PF10226 Family 15 252 173.10 51 45.99 Changed CCDC85 family
CCDC92 PF14916 Coiled-coil 18 208 54.90 40 18.59 Changed Coiled-coil domain of unknown function
CCER1 PF15482 Coiled-coil 7 34 183.20 60 54.06 Changed Coiled-coil domain-containing glutamate-rich protein family 1
CCG PF02754 Family 58 8349 86.50 20 29.86 Changed Cysteine-rich domain
CclA_1 PF16942 Family 3 0 0.00 0 0.00 Changed Putative cyclic bacteriocin
CCM2_C PF16545 Domain 10 152 94.80 60 21.48 Changed Cerebral cavernous malformation protein, harmonin-homology
CcmB PF03379 Family 10 745 212.50 34 95.48 Changed CcmB protein
CcmD PF04995 Family 135 439 43.50 27 69.09 Changed Heme exporter protein D (CcmD)
CcmE PF03100 Family 255 840 128.10 34 78.16 Changed CcmE
CcmF_C PF16327 Family 190 873 297.60 29 47.34 Changed Cytochrome c-type biogenesis protein CcmF C-terminal
CcmH PF03918 Family 180 782 139.10 30 81.19 Changed Cytochrome C biogenesis protein
CCP_MauG PF03150 Family 548 1294 162.30 31 40.90 Changed Di-haem cytochrome c peroxidase
CCSAP PF15748 Family 32 83 231.40 40 94.55 Changed Centriole, cilia and spindle-associated
CCSMST1 PF15013 Family 32 105 75.60 33 49.74 Changed CCSMST1 family
CCT PF06203 Motif 121 2421 43.60 51 11.24 Changed CCT motif
CCT_2 PF09425 Motif 55 885 25.30 59 10.05 Changed Divergent CCT motif
CD20 PF04103 Family 41 1154 132.80 19 45.06 Changed CD20-like family
CD225 PF04505 Family 147 1035 66.90 30 36.96 Changed Interferon-induced transmembrane protein
CD24 PF14984 Family 15 37 52.10 66 61.49 Changed CD24 protein
CD34_antigen PF06365 Family 21 211 178.80 35 41.54 Changed CD34/Podocalyxin family
CD36 PF01130 Family 250 1291 351.70 21 79.95 Changed CD36 family
CD4-extracel PF09191 Domain 20 54 105.10 58 23.40 Changed CD4, extracellular
CD45 PF12567 Family 19 45 58.60 48 5.27 Changed Leukocyte receptor CD45
CD47 PF04549 Family 19 75 142.90 54 48.46 Changed CD47 transmembrane region
CD52 PF15116 Family 10 22 46.60 44 67.17 Changed CAMPATH-1 antigen
CD99L2 PF12301 Family 15 175 145.60 35 80.15 Changed CD99 antigen like protein 2
CdAMP_rec PF06153 Family 10 398 106.20 43 97.08 Changed Cyclic-di-AMP receptor
CDC13_N PF16853 Domain 13 22 212.90 29 24.17 Changed Cell division control protein 13 N-terminus
CDC14 PF08045 Family 45 306 228.60 34 73.77 Changed Cell division control protein 14, SIN component
CDC24 PF06395 Domain 17 299 89.50 40 9.93 Changed CDC24 Calponin
CDC27 PF09507 Family 10 531 369.20 20 86.43 Changed DNA polymerase subunit Cdc27
CDC37_C PF08564 Domain 31 464 88.30 29 19.27 Changed Cdc37 C terminal domain
CDC37_M PF08565 Domain 58 541 112.80 31 25.45 Changed Cdc37 Hsp90 binding domain
CDC37_N PF03234 Domain 110 470 144.80 30 32.43 Changed Cdc37 N terminal kinase binding
CDC45 PF02724 Family 122 773 475.30 26 91.93 Changed CDC45-like protein
CDC48_2 PF02933 Domain 82 1592 68.20 30 8.82 Changed Cell division protein 48 (CDC48), domain 2
CDC48_N PF02359 Domain 102 1557 83.00 32 10.98 Changed Cell division protein 48 (CDC48), N-terminal domain
CDC4_D PF16856 Domain 27 39 50.30 37 6.74 Changed Cell division control protein 4 dimerisation domain
CDC50 PF03381 Family 342 1346 270.00 32 74.95 Changed LEM3 (ligand-effect modulator 3) family / CDC50 family
Cdc6_C PF09079 Domain 206 796 79.40 20 14.79 Changed CDC6, C terminal winged helix domain
CDC73_C PF05179 Domain 151 598 157.70 33 35.49 Changed RNA pol II accessory factor, Cdc73 family, C-terminal
CDC73_N PF16050 Family 21 290 215.30 32 48.92 Changed Paf1 complex subunit CDC73 N-terminal
CdCA1 PF10563 Repeat 8 36 158.80 32 46.19 Changed Cadmium carbonic anhydrase repeat
Cdd1 PF11731 Family 32 114 83.60 34 79.07 Changed Pathogenicity locus
CDH PF02611 Family 46 117 213.80 34 83.05 Changed CDP-diacylglycerol pyrophosphatase
CDH-cyt PF16010 Family 159 892 169.90 23 33.39 Changed Cytochrome domain of cellobiose dehydrogenase
CdhC PF03598 Domain 63 174 151.80 42 25.99 Changed CO dehydrogenase/acetyl-CoA synthase complex beta subunit
CdhD PF03599 Family 9 340 296.50 23 73.16 Changed CO dehydrogenase/acetyl-CoA synthase delta subunit
CDI PF02234 Family 121 627 48.70 34 23.89 Changed Cyclin-dependent kinase inhibitor
CDK2AP PF09806 Family 10 210 114.60 45 67.97 Changed Cyclin-dependent kinase 2-associated protein
CDK5_activator PF03261 Family 10 261 194.70 39 71.30 Changed Cyclin-dependent kinase 5 activator protein
CDKN3 PF05706 Domain 2 185 133.80 34 57.83 Changed Cyclin-dependent kinase inhibitor 3 (CDKN3)
CDO_I PF05995 Domain 4 952 147.70 25 69.29 Changed Cysteine dioxygenase type I
CDP-OH_P_transf PF01066 Family 1011 9043 69.50 29 26.43 Changed CDP-alcohol phosphatidyltransferase
CDP-OH_P_tran_2 PF08009 Domain 45 174 36.70 34 13.16 Changed CDP-alcohol phosphatidyltransferase 2
CDPS PF16715 Domain 18 74 198.30 23 83.18 Changed Cyclodipeptide synthase
CDRN PF05174 Domain 4 6 54.70 74 18.23 Changed Cysteine-rich D. radiodurans N terminus
CDRT4 PF15213 Family 16 34 134.40 61 84.42 Changed CMT1A duplicated region transcript 4 protein
CDT1 PF08839 Domain 60 526 156.10 18 21.36 Changed DNA replication factor CDT1 like
CDT1_C PF16679 Domain 115 546 97.70 22 18.31 Changed DNA replication factor Cdt1 C-terminal domain
CDtoxinA PF03498 Domain 10 31 143.40 24 60.74 Changed Cytolethal distending toxin A/C domain
CDV3 PF15359 Family 24 150 120.70 41 54.40 Changed Carnitine deficiency-associated protein 3
CEBP1_N PF16368 Family 9 122 233.70 60 45.31 Changed Cytoplasmic polyadenylation element-binding protein 1 N-terminus
CEBP_ZZ PF16366 Domain 50 546 61.60 60 10.95 Changed Cytoplasmic polyadenylation element-binding protein ZZ domain
CECR6_TMEM121 PF14997 Family 16 204 189.10 29 46.76 Changed CECR6/TMEM121 family
Cecropin PF00272 Family 20 82 30.90 50 49.44 Changed Cecropin family
CedA PF10729 Family 2 18 75.50 75 92.14 Changed Cell division activator CedA
cEGF PF12662 Domain 555 3409 23.80 48 2.21 Changed Complement Clr-like EGF-like
CelD_N PF02927 Domain 120 430 85.80 25 11.38 Changed Cellulase N-terminal ig-like domain
Cellsynth_D PF03500 Family 2 56 124.30 27 81.06 Changed Cellulose synthase subunit D
Cellulase PF00150 Domain 65 6580 281.80 13 55.27 Changed Cellulase (glycosyl hydrolase family 5)
Cellulase-like PF12876 Domain 6 32 279.60 28 79.54 Changed Sugar-binding cellulase-like
Cellulose_synt PF03552 Family 12 3029 398.20 29 72.47 Changed Cellulose synthase
CemA PF03040 Family 53 259 193.00 36 59.90 Changed CemA family
Cementoin PF10511 Family 17 80 16.90 56 18.78 Changed Trappin protein transglutaminase binding domain
CEND1 PF15677 Family 7 46 137.70 58 96.14 Changed Cell cycle exit and neuronal differentiation protein 1
CENP-B_dimeris PF09026 Domain 2 37 89.00 58 16.95 Changed Centromere protein B dimerisation domain
CENP-B_N PF04218 Domain 6 941 52.10 26 11.92 Changed CENP-B N-terminal DNA-binding domain
CENP-C_C PF11699 Domain 11 346 84.60 38 12.63 Changed Mif2/CENP-C like
CENP-C_mid PF15620 Family 20 42 245.50 60 28.74 Changed Centromere assembly component CENP-C middle DNMT3B-binding region
CENP-F_C_Rb_bdg PF10490 Domain 10 67 45.80 66 1.75 Changed Rb-binding domain of kinetochore protein Cenp-F/LEK1
CENP-F_leu_zip PF10473 Domain 27 160 137.80 34 11.92 Changed Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
CENP-F_N PF10481 Domain 13 81 260.30 57 10.84 Changed Cenp-F N-terminal domain
CENP-H PF05837 Domain 80 221 115.60 27 46.94 Changed Centromere protein H (CENP-H)
CENP-I PF07778 Family 5 311 343.90 25 57.21 Changed Mis6
CENP-K PF11802 Family 16 128 206.80 31 80.53 Changed Centromere-associated protein K
CENP-L PF13092 Family 80 266 168.60 25 43.94 Changed Kinetochore complex Sim4 subunit Fta1
CENP-M PF11111 Family 16 82 159.10 44 93.03 Changed Centromere protein M (CENP-M)
CENP-N PF05238 Family 28 308 381.10 23 92.50 Changed Kinetochore protein CHL4 like
CENP-O PF09496 Family 65 372 180.50 23 56.88 Changed Cenp-O kinetochore centromere component
CENP-P PF13096 Family 3 63 134.20 40 57.74 Changed CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
CENP-Q PF13094 Family 84 218 165.80 25 41.11 Changed CENP-Q, a CENPA-CAD centromere complex subunit
CENP-R PF06729 Family 11 40 120.80 49 74.54 Changed Kinetochore component, CENP-R
CENP-S PF15630 Domain 42 406 73.90 39 45.10 Changed CENP-S protein
CENP-T_C PF15511 Domain 11 1361 84.10 59 44.05 Changed Centromere kinetochore component CENP-T histone fold
CENP-T_N PF16171 Family 13 65 293.70 48 71.06 Changed Centromere kinetochore component CENP-T N-terminus
CENP-U PF13097 Family 23 59 162.80 38 41.87 Changed CENP-A nucleosome associated complex (NAC) subunit
CENP-W PF15510 Domain 4 109 79.80 35 95.94 Changed CENP-W protein
CENP-X PF09415 Domain 85 347 72.10 34 46.55 Changed CENP-S associating Centromere protein X
CENP_C_N PF15622 Family 14 55 228.30 55 30.83 Changed Kinetochore assembly subunit CENP-C N-terminal
CEP1-DNA_bind PF09287 Domain 2 8 157.00 25 37.14 Changed CEP-1, DNA binding
CEP170_C PF15308 Family 24 227 510.80 41 44.31 Changed CEP170 C-terminus
CEP19 PF14933 Family 16 152 143.70 35 69.26 Changed CEP19-like protein
CEP209_CC5 PF16574 Family 18 87 126.80 57 6.08 Changed Coiled-coil region of centrosome protein CE290
Cep3 PF16846 Domain 14 41 341.60 24 55.47 Changed Centromere DNA-binding protein complex CBF3 subunit B
CEP44 PF15007 Family 32 147 122.30 39 29.35 Changed Centrosomal spindle body, CEP44
Cep57_CLD PF14073 Domain 35 182 162.20 52 37.56 Changed Centrosome localisation domain of Cep57
Cep57_CLD_2 PF14197 Family 22 198 70.90 29 8.68 Changed Centrosome localisation domain of PPC89
Cep57_MT_bd PF06657 Domain 88 335 75.10 32 9.81 Changed Centrosome microtubule-binding domain of Cep57
CEP63 PF17045 Family 10 166 229.20 49 42.96 Changed Centrosomal protein of 63 kDa
CEP76-C2 PF15627 Family 26 121 157.30 47 24.06 Changed CEP76 C2 domain
Ceramidase PF05875 Family 165 1145 223.60 22 84.44 Changed Ceramidase
Ceramidase_alk PF04734 Domain 136 965 418.70 34 67.46 Changed Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C PF17048 Domain 154 715 160.50 35 22.73 Changed Neutral/alkaline non-lysosomal ceramidase, C-terminal
Cerato-platanin PF07249 Family 4 336 114.80 38 66.32 Changed Cerato-platanin
CesT PF05932 Domain 25 296 116.30 16 59.22 Changed Tir chaperone protein (CesT) family
CF222 PF15661 Family 12 43 476.20 51 97.16 Changed C6orf222, uncharacterised family
CfAFP PF05264 Family 4 0 0.00 0 0.00 Changed Choristoneura fumiferana antifreeze protein (CfAFP)
CFC PF09443 Domain 30 101 34.60 51 18.36 Changed Cripto_Frl-1_Cryptic (CFC)
CFEM PF05730 Domain 94 2420 66.50 24 21.81 Changed CFEM domain
CFIA_Pcf11 PF11526 Family 35 200 74.70 25 10.61 Changed Subunit of cleavage factor IA Pcf11
CFTR_R PF14396 Domain 15 91 206.80 65 15.00 Changed Cystic fibrosis TM conductance regulator (CFTR), regulator domain
CG-1 PF03859 Domain 37 654 106.90 52 11.18 Changed CG-1 domain
Cg6151-P PF10233 Domain 87 377 109.30 35 61.56 Changed Uncharacterized conserved protein CG6151-P
CGGC PF08821 Domain 99 187 105.30 30 87.29 Changed CGGC domain
CGI-121 PF08617 Domain 169 635 154.40 25 78.58 Changed Kinase binding protein CGI-121
Cgr1 PF03879 Family 80 506 103.30 31 59.97 Changed Cgr1 family
CgtA PF06306 Family 2 15 231.30 23 69.64 Changed Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)
CH PF00307 Domain 122 16070 107.60 18 12.49 Changed Calponin homology (CH) domain
ChaB PF06150 Domain 95 245 58.20 40 47.85 Changed ChaB
ChaC PF04752 Family 12 1217 167.20 33 77.28 Changed ChaC-like protein
CHAD PF05235 Domain 365 865 230.70 21 55.38 Changed CHAD domain
Chalcone PF02431 Domain 8 259 184.60 34 81.42 Changed Chalcone-flavanone isomerase
Chalcone_2 PF16035 Domain 89 466 176.10 29 51.71 Changed Chalcone isomerase like
Chalcone_3 PF16036 Domain 59 413 156.00 20 72.30 Changed Chalcone isomerase-like
Chal_sti_synt_C PF02797 Domain 6 1550 138.90 32 35.70 Changed Chalcone and stilbene synthases, C-terminal domain
Chal_sti_synt_N PF00195 Domain 5 1543 187.40 32 50.91 Changed Chalcone and stilbene synthases, N-terminal domain
Channel_Tsx PF03502 Family 17 212 236.40 24 87.47 Changed Nucleoside-specific channel-forming protein, Tsx
CHAP PF05257 Domain 517 1250 91.90 22 23.63 Changed CHAP domain
Chaperone_III PF07824 Domain 4 5 110.40 46 96.17 Changed Type III secretion chaperone domain
ChapFlgA PF13144 Family 58 815 171.30 20 70.62 Changed Chaperone for flagella basal body P-ring formation
ChAPs PF09295 Family 13 494 289.90 30 47.02 Changed ChAPs (Chs5p-Arf1p-binding proteins)
CHASE PF03924 Domain 208 1096 175.40 19 20.00 Changed CHASE domain
CHASE2 PF05226 Domain 464 1101 329.70 19 46.42 Changed CHASE2 domain
CHASE3 PF05227 Domain 129 980 136.30 20 20.51 Changed CHASE3 domain
CHASE4 PF05228 Domain 160 404 156.80 16 21.92 Changed CHASE4 domain
CHASE5 PF17149 Domain 3 111 106.90 24 15.82 Changed Periplasmic sensor domain found in signal transduction proteins
CHASE6_C PF17150 Family 68 103 84.90 40 14.56 Changed C-terminal domain of two-partite extracellular sensor domain
CHASE7 PF17151 Domain 8 22 184.40 38 33.57 Changed Periplasmic sensor domain
CHASE8 PF17152 Family 45 252 104.60 20 16.51 Changed Periplasmic sensor domain
CHASE9 PF17153 Family 5 2 116.00 100 16.08 Changed Periplasmic sensor domain, extracellular
CHAT PF12770 Domain 53 3415 276.80 18 27.56 Changed CHAT domain
CHB_HEX PF03173 Domain 30 157 150.40 25 17.64 Changed Putative carbohydrate binding domain
CHB_HEX_C PF03174 Domain 48 163 75.50 34 8.86 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHB_HEX_C_1 PF13290 Domain 112 1050 67.60 27 9.91 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHCH PF06747 Domain 50 1362 35.50 26 22.82 Changed CHCH domain
CHD5 PF04420 Family 112 469 152.60 25 71.66 Changed CHD5-like protein
CHDCT2 PF08074 Domain 18 367 157.20 70 9.32 Changed CHDCT2 (NUC038) domain
CHDNT PF08073 Domain 26 312 53.20 63 2.96 Changed CHDNT (NUC034) domain
CheB_methylest PF01339 Domain 996 2462 176.60 35 37.38 Changed CheB methylesterase
CheC PF04509 Domain 28 1243 37.40 35 23.01 Changed CheC-like family
CheD PF03975 Family 317 830 104.50 31 57.29 Changed CheD chemotactic sensory transduction
CheF-arch PF04283 Family 32 64 196.10 22 67.84 Changed Chemotaxis signal transduction system protein F from archaea
CheR PF01739 Domain 20 2585 189.80 30 42.39 Changed CheR methyltransferase, SAM binding domain
CheR_N PF03705 Domain 748 2144 52.30 22 11.40 Changed CheR methyltransferase, all-alpha domain
CheW PF01584 Domain 219 6561 135.80 20 32.23 Changed CheW-like domain
CheX PF13690 Domain 68 659 97.20 21 49.93 Changed Chemotaxis phosphatase CheX
CheY-binding PF09078 Domain 45 109 62.50 39 9.20 Changed CheY binding
CheZ PF04344 Family 109 488 172.00 30 74.27 Changed Chemotaxis phosphatase, CheZ
CHGN PF05679 Family 67 853 404.60 24 62.59 Changed Chondroitin N-acetylgalactosaminyltransferase
Chi-conotoxin PF16981 Domain 50 0 0.00 0 0.00 Changed chi-Conotoxin or t superfamily
Chibby PF14645 Family 31 213 112.60 34 54.19 Changed Chibby family
ChiC PF06483 Family 21 97 172.00 43 19.42 Changed Chitinase C
CHIPS PF11434 Family 1 1 91.00 100 61.07 Changed Chemotaxis-inhibiting protein CHIPS
Chisel PF15355 Family 7 57 81.80 75 92.98 Changed Stretch-responsive small skeletal muscle X protein, Chisel
ChitinaseA_N PF08329 Domain 8 78 122.00 31 14.09 Changed Chitinase A, N-terminal domain
Chitin_bind_1 PF00187 Domain 198 1743 41.30 41 8.93 Changed Chitin recognition protein
Chitin_bind_4 PF00379 Family 107 3813 53.00 32 24.25 Changed Insect cuticle protein
Chitin_synth_1 PF01644 Family 109 1036 162.50 53 17.53 Changed Chitin synthase
Chitin_synth_1N PF08407 Family 144 990 74.20 46 7.96 Changed Chitin synthase N-terminal
Chitin_synth_2 PF03142 Family 8 1641 387.30 32 34.09 Changed Chitin synthase
ChlamPMP_M PF07548 Family 8 43 163.70 24 16.72 Changed Chlamydia polymorphic membrane protein middle domain
Chlamy_scaf PF09675 Family 2 3 77.30 49 72.96 Changed Chlamydia-phage Chp2 scaffold (Chlamy_scaf)
Chlam_OMP PF01308 Family 2 6 283.70 30 80.02 Changed Chlamydia major outer membrane protein
Chlam_OMP3 PF03503 Family 1 2 55.00 70 61.80 Changed Chlamydia cysteine-rich outer membrane protein 3
Chlam_OMP6 PF03504 Family 2 4 90.00 57 15.84 Changed Chlamydia cysteine-rich outer membrane protein 6
Chlam_PMP PF02415 Repeat 524 315 21.90 43 4.86 Changed Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
Chlam_vir PF05475 Domain 3 1 146.00 100 60.83 Changed Pgp3 C-terminal domain
ChlI PF13541 Domain 110 4066 111.80 31 23.47 Changed Subunit ChlI of Mg-chelatase
Chloroa_b-bind PF00504 Family 157 2853 137.10 27 62.80 Changed Chlorophyll A-B binding protein
Chlorophyllase PF07224 Family 4 134 223.00 30 73.25 Changed Chlorophyllase
Chlorophyllase2 PF12740 Family 28 433 166.30 19 43.95 Changed Chlorophyllase enzyme
Chloroplast_duf PF14476 Family 24 245 247.80 51 75.10 Changed Petal formation-expressed
Chlorosome_CsmC PF11098 Family 5 9 138.70 70 98.81 Changed Chlorosome envelope protein C
Chlorovi_GP_rpt PF06598 Repeat 36 17 35.50 74 22.55 Changed Chlorovirus glycoprotein repeat
Chlor_dismutase PF06778 Domain 132 537 191.80 34 74.42 Changed Chlorite dismutase
CHMI PF02962 Domain 1 211 119.30 30 93.39 Changed 5-carboxymethyl-2-hydroxymuconate isomerase
CholecysA-Rec_N PF09193 Domain 5 46 47.50 73 11.09 Changed Cholecystokinin A receptor, N-terminal
Choline_kinase PF01633 Family 33 2229 198.60 22 48.32 Changed Choline/ethanolamine kinase
Choline_kin_N PF04428 Family 20 228 68.10 38 9.49 Changed Choline kinase N terminus
Choline_sulf_C PF12411 Family 49 294 53.20 48 9.87 Changed Choline sulfatase enzyme C terminal
Choline_transpo PF04515 Family 320 1991 298.60 21 51.84 Changed Plasma-membrane choline transporter
Chol_subst-bind PF09129 Domain 14 54 281.60 48 55.12 Changed Cholesterol oxidase, substrate-binding
Chondroitinas_B PF14592 Family 10 206 240.90 30 42.31 Changed Chondroitinase B
Chon_Sulph_att PF06566 Domain 8 41 218.70 70 38.48 Changed Chondroitin sulphate attachment domain
CHORD PF04968 Family 214 1125 60.90 46 36.38 Changed CHORD
Chordopox_A13L PF05961 Family 7 10 67.70 33 94.82 Changed Chordopoxvirus A13L protein
Chordopox_A15 PF05846 Family 6 9 91.40 40 96.71 Changed Chordopoxvirus A15 protein
Chordopox_A20R PF05941 Family 9 11 334.30 34 76.94 Changed Chordopoxvirus A20R protein
Chordopox_A30L PF06015 Family 7 11 70.60 44 96.88 Changed Chordopoxvirus A30L protein
Chordopox_A33R PF05966 Family 3 9 169.00 32 93.72 Changed Chordopoxvirus A33R protein
Chordopox_A35R PF05989 Family 7 9 161.10 34 92.71 Changed Chordopoxvirus A35R protein
Chordopox_E11 PF06138 Family 6 7 127.40 36 97.91 Changed Chordopoxvirus E11 protein
Chordopox_G2 PF05796 Family 9 11 217.00 38 95.48 Changed Chordopoxvirus protein G2
Chordopox_G3 PF06129 Family 10 13 106.20 33 90.97 Changed Chordopoxvirus G3 protein
Chordopox_L2 PF05803 Family 9 11 81.00 29 87.35 Changed Chordopoxvirus L2 protein
Chordopox_RPO7 PF05864 Family 6 11 63.00 71 100.00 Changed Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7)
Chorein_N PF12624 Family 228 2077 110.10 25 4.21 Changed N-terminal region of Chorein or VPS13
Chorion_1 PF01723 Family 5 57 129.60 25 84.32 Changed Chorion protein
Chorion_2 PF03964 Family 9 28 104.90 27 69.08 Changed Chorion family 2
Chorion_3 PF05387 Family 4 31 174.60 32 82.92 Changed Chorion family 3
Chorion_S16 PF05836 Family 5 12 103.50 69 76.43 Changed Chorion protein S16
Chorismate_bind PF00425 Family 119 5818 250.30 33 49.71 Changed chorismate binding enzyme
Chorismate_synt PF01264 Family 800 2797 337.00 43 92.13 Changed Chorismate synthase
Chor_lyase PF04345 Domain 3 336 165.80 28 90.87 Changed Chorismate lyase
ChpXY PF10216 Family 45 126 368.50 60 91.69 Changed CO2 hydration protein (ChpXY)
CHRD PF07452 Domain 207 614 121.90 21 40.21 Changed CHRD domain
Chromadorea_ALT PF05535 Family 10 70 68.60 41 41.99 Changed Chromadorea ALT protein
Chromate_transp PF02417 Family 1619 3861 171.10 24 81.58 Changed Chromate transporter
Chrome_Resist PF09828 Family 89 235 132.00 40 52.51 Changed Chromate resistance exported protein
Chromo PF00385 Domain 120 7900 53.50 25 6.77 Changed Chromo (CHRromatin Organisation MOdifier) domain
Chromosome_seg PF13889 Family 60 513 62.90 45 8.46 Changed Chromosome segregation during meiosis
Chromo_shadow PF01393 Domain 94 805 53.20 38 24.70 Changed Chromo shadow domain
Chs3p PF12271 Family 99 519 268.80 39 86.14 Changed Chitin synthase III catalytic subunit
CHS5_N PF16892 Domain 18 258 47.60 68 10.29 Changed Chitin biosynthesis protein CHS5 N-terminus
Churchill PF06573 Family 15 83 99.90 67 61.02 Changed Churchill protein
ChuX_HutX PF06228 Domain 120 255 131.30 24 55.40 Changed Haem utilisation ChuX/HutX
CHU_C PF13585 Domain 69 1369 87.80 28 6.75 Changed C-terminal domain of CHU protein family
ChW PF07538 Repeat 441 812 35.00 42 22.45 Changed Clostridial hydrophobic W
CHZ PF09649 Domain 50 385 33.00 41 13.27 Changed Histone chaperone domain CHZ
CH_2 PF06294 Domain 175 558 93.90 30 14.59 Changed CH-like domain in sperm protein
CI-B14_5a PF07347 Family 40 158 91.10 38 69.63 Changed NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
CIA30 PF08547 Family 60 1211 158.70 22 49.73 Changed Complex I intermediate-associated protein 30 (CIA30)
CIAPIN1 PF05093 Family 62 761 68.80 42 28.19 Changed Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
Ciart PF15673 Family 6 75 211.40 55 67.24 Changed Circadian-associated transcriptional repressor
Cid2 PF09774 Family 84 373 141.00 32 75.94 Changed Caffeine-induced death protein 2
CIDE-N PF02017 Domain 98 437 73.50 39 23.85 Changed CIDE-N domain
CID_GANP PF16766 Family 16 69 70.20 53 3.82 Changed Binding region of GANP to ENY2
CIF PF16374 Family 2 3 132.30 38 43.29 Changed Cycle inhibiting factor (CIF)
cIII PF08134 Family 1 1 40.00 100 93.02 Changed cIII protein family
CIMR PF00878 Family 8 1442 136.60 24 77.28 Changed Cation-independent mannose-6-phosphate receptor repeat
CinA PF02464 Family 73 2495 152.90 34 59.32 Changed Competence-damaged protein
CiPC PF15800 Family 16 103 265.90 38 80.61 Changed Clock interacting protein circadian
Circo_capsid PF02443 Domain 12 2 206.50 16 72.58 Changed Circovirus capsid protein
Cir_Bir_Yir PF06022 Family 549 1539 244.70 28 73.84 Changed Plasmodium variant antigen protein Cir/Yir/Bir
Cir_N PF10197 Domain 153 1063 37.20 35 9.67 Changed N-terminal domain of CBF1 interacting co-repressor CIR
CITED PF04487 Family 20 155 180.60 39 89.41 Changed CITED
CitF PF04223 Family 5 276 447.20 51 91.45 Changed Citrate lyase, alpha subunit (CitF)
CitG PF01874 Family 255 536 259.90 26 84.22 Changed ATP:dephospho-CoA triphosphoribosyl transferase
CitMHS PF03600 Family 639 4610 364.60 14 83.30 Changed Citrate transporter
CitMHS_2 PF16980 Family 52 246 421.90 46 92.93 Changed Putative citrate transport
Citrate_bind PF16114 Domain 44 702 169.90 57 26.37 Changed ATP citrate lyase citrate-binding
Citrate_ly_lig PF08218 Domain 12 233 177.00 42 48.39 Changed Citrate lyase ligase C-terminal domain
Citrate_synt PF00285 Domain 853 5373 322.50 30 73.21 Changed Citrate synthase, C-terminal domain
Citrus_P18 PF05520 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus P18 protein
CitT PF12431 Family 45 107 29.70 34 13.07 Changed Transcriptional regulator
CitX PF03802 Family 90 212 157.80 31 64.54 Changed Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CK1gamma_C PF12605 Family 22 356 63.50 51 17.58 Changed Casein kinase 1 gamma C terminal
CK2S PF15011 Family 36 203 143.80 26 67.57 Changed Casein Kinase 2 substrate
CKAP2_C PF15297 Family 17 204 194.90 30 48.51 Changed Cytoskeleton-associated protein 2 C-terminus
CKS PF01111 Domain 110 800 70.30 56 49.63 Changed Cyclin-dependent kinase regulatory subunit
CK_II_beta PF01214 Domain 194 1416 184.70 48 67.33 Changed Casein kinase II regulatory subunit
CLAG PF03805 Family 8 84 562.80 24 78.03 Changed Cytoadherence-linked asexual protein
CLAMP PF14769 Family 69 296 96.50 24 33.85 Changed Flagellar C1a complex subunit C1a-32
CLASP_N PF12348 Family 52 2435 203.50 17 24.40 Changed CLASP N terminal
Class_IIIsignal PF04021 Motif 50 110 26.40 32 23.21 Changed Class III signal peptide
Clathrin PF00637 Family 128 7302 140.30 16 31.64 Changed Region in Clathrin and VPS
Clathrin-link PF09268 Domain 60 526 23.80 52 1.49 Changed Clathrin, heavy-chain linker
Clathrin_bdg PF15045 Family 27 155 71.90 43 10.45 Changed Clathrin-binding box of Aftiphilin, vesicle trafficking
Clathrin_H_link PF13838 Domain 73 812 65.00 53 4.24 Changed Clathrin-H-link
Clathrin_lg_ch PF01086 Family 94 848 205.30 23 83.94 Changed Clathrin light chain
Clathrin_propel PF01394 Repeat 49 1735 38.10 25 6.24 Changed Clathrin propeller repeat
Clat_adaptor_s PF01217 Domain 7 5035 136.50 24 49.98 Changed Clathrin adaptor complex small chain
Claudin_2 PF13903 Family 14 1016 177.70 18 70.95 Changed PMP-22/EMP/MP20/Claudin tight junction
Claudin_3 PF06653 Family 24 131 160.50 18 90.10 Changed Tight junction protein, Claudin-like
Clavanin PF05452 Family 2 0 0.00 0 0.00 Changed Clavanin
Clc-like PF07062 Family 5 254 176.80 27 65.57 Changed Clc-like
CLCA PF08434 Family 29 482 548.10 28 83.56 Changed Calcium-activated chloride channel
Cleaved_Adhesin PF07675 Domain 4 132 144.20 17 18.98 Changed Cleaved Adhesin Domain
Clenterotox PF03505 Family 4 6 172.50 42 55.20 Changed Clostridium enterotoxin
CLIP PF12032 Domain 225 435 54.10 28 14.31 Changed Regulatory CLIP domain of proteinases
CLIP1_ZNF PF16641 Family 45 634 16.90 52 2.79 Changed CLIP1 zinc knuckle
CLLAC PF15675 Family 15 55 29.90 61 14.89 Changed CLLAC-motif containing domain
CLN3 PF02487 Family 96 713 317.00 30 79.29 Changed CLN3 protein
CLN5 PF15014 Family 10 78 279.70 60 84.02 Changed Ceroid-lipofuscinosis neuronal protein 5
CLN6 PF15156 Family 10 85 232.90 71 76.01 Changed Ceroid-lipofuscinosis neuronal protein 6
Cloacin PF03515 Family 6 6 255.70 24 51.37 Changed Colicin-like bacteriocin tRNase domain
Cloacin_immun PF03513 Family 5 10 79.70 43 70.78 Changed Cloacin immunity protein
Closter_coat PF01785 Family 11 7 183.00 15 57.91 Changed Closterovirus coat protein
Clostridium_P47 PF06597 Family 6 30 345.90 18 81.19 Changed Clostridium P-47 protein
Clp1 PF06807 Family 139 561 115.20 31 25.04 Changed Pre-mRNA cleavage complex II protein Clp1
CLP1_N PF16573 Family 159 612 93.90 36 20.16 Changed N-terminal beta-sandwich domain of polyadenylation factor
CLP1_P PF16575 Domain 90 1379 178.00 23 33.32 Changed mRNA cleavage and polyadenylation factor CLP1 P-loop
ClpB_D2-small PF10431 Domain 573 11735 81.50 26 11.94 Changed C-terminal, D2-small domain, of ClpB protein
ClpS PF02617 Family 291 2051 76.30 27 15.49 Changed ATP-dependent Clp protease adaptor protein ClpS
CLPTM1 PF05602 Family 148 875 375.60 29 71.33 Changed Cleft lip and palate transmembrane protein 1 (CLPTM1)
Clp_N PF02861 Family 133 12104 50.50 23 11.68 Changed Clp amino terminal domain, pathogenicity island component
CLP_protease PF00574 Domain 67 6089 173.40 39 75.92 Changed Clp protease
Clr2 PF10383 Family 34 234 136.10 23 19.98 Changed Transcription-silencing protein Clr2
Clr2_transil PF16761 Family 76 286 67.60 34 11.78 Changed Transcription-silencing protein, cryptic loci regulator Clr2
Clr5 PF14420 Domain 296 1062 53.80 28 8.99 Changed Clr5 domain
CLTH PF10607 Domain 122 2643 166.00 22 39.20 Changed CTLH/CRA C-terminal to LisH motif domain
CLU PF13236 Domain 120 742 218.70 35 17.06 Changed Clustered mitochondria
Cluap1 PF10234 Family 48 271 227.90 41 63.27 Changed Clusterin-associated protein-1
Clusterin PF01093 Family 51 190 342.10 36 90.74 Changed Clusterin
CLU_N PF15044 Family 48 668 74.40 36 5.48 Changed Mitochondrial function, CLU-N-term
CLZ PF16526 Domain 59 403 70.50 47 11.17 Changed C-terminal leucine zipper domain of cyclic nucleotide-gated channels
CM1 PF03026 Family 1 1 235.00 100 62.83 Changed Influenza C virus M1 protein
CM2 PF03021 Family 1 1 139.00 100 37.17 Changed Influenza C virus M2 protein
CMAS PF02353 Family 12 3105 253.40 30 60.38 Changed Mycolic acid cyclopropane synthetase
Cmc1 PF08583 Family 47 947 68.90 22 55.83 Changed Cytochrome c oxidase biogenesis protein Cmc1 like
CmcI PF04989 Family 15 157 195.00 35 74.84 Changed Cephalosporin hydroxylase
CMD PF02627 Family 180 6818 82.60 18 49.00 Changed Carboxymuconolactone decarboxylase family
CMS1 PF14617 Family 4 447 226.70 28 81.22 Changed U3-containing 90S pre-ribosomal complex subunit
CMV_1a PF12467 Family 2 2 166.00 33 16.98 Changed Cucumber mosaic virus 1a protein family
CMV_1a_C PF12503 Family 3 3 83.70 38 8.61 Changed Cucumber mosaic virus 1a protein C terminal
CMV_US PF08001 Family 3 4 214.80 21 93.98 Changed CMV US
Cmyb_C PF09316 Family 24 284 152.30 43 22.68 Changed C-myb, C-terminal
CM_1 PF07736 Domain 170 364 115.00 43 90.19 Changed Chorismate mutase type I
CM_2 PF01817 Domain 965 2835 77.20 25 29.94 Changed Chorismate mutase type II
Cm_res_leader PF08077 Family 1 1 17.00 100 100.00 Changed Chloramphenicol resistance gene leader peptide
Cna_B PF05738 Domain 264 1049 89.30 29 24.71 Changed Cna protein B-type domain
Cnd1 PF12717 Family 181 1117 160.10 27 14.25 Changed non-SMC mitotic condensation complex subunit 1
Cnd1_N PF12922 Domain 148 550 160.90 26 12.91 Changed non-SMC mitotic condensation complex subunit 1, N-term
Cnd2 PF05786 Family 55 893 487.30 20 89.87 Changed Condensin complex subunit 2
Cnd3 PF12719 Family 130 589 286.20 23 28.97 Changed Nuclear condensing complex subunits, C-term domain
CNDH2_C PF16858 Family 26 298 261.20 21 39.34 Changed Condensin II complex subunit CAP-H2 or CNDH2, C-term
CNDH2_M PF16869 Family 15 133 140.40 25 23.24 Changed PF16858
CNDH2_N PF06278 Family 33 247 106.90 39 17.36 Changed Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNF1 PF05785 Domain 3 5 279.80 29 26.14 Changed Rho-activating domain of cytotoxic necrotizing factor
CNH PF00780 Family 52 2905 262.80 18 23.57 Changed CNH domain
Cnl2_NKP2 PF09447 Family 53 164 65.00 45 32.93 Changed Cnl2/NKP2 family protein
cNMPbd_u2 PF16643 Disordered 28 158 151.40 35 15.68 Changed Unstructured region on cNMP-binding protein
cNMP_binding PF00027 Domain 221 22900 88.10 20 18.97 Changed Cyclic nucleotide-binding domain
Cnn_1N PF07989 Domain 95 735 73.40 36 5.68 Changed Centrosomin N-terminal motif 1
CNOT1_CAF1_bind PF16415 Domain 98 765 209.80 40 10.60 Changed CCR4-NOT transcription complex subunit 1 CAF1-binding domain
CNOT1_HEAT PF16418 Domain 142 622 147.30 26 7.02 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_HEAT_N PF16419 Domain 25 40 225.60 34 11.48 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_TTP_bind PF16417 Domain 34 712 174.00 33 8.55 Changed CCR4-NOT transcription complex subunit 1 TTP binding domain
CNP1 PF08750 Family 41 92 138.40 32 73.78 Changed CNP1-like family
CNPase PF05881 Family 11 78 212.70 50 47.10 Changed 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
CNRIP1 PF15043 Family 17 128 139.80 39 89.13 Changed CB1 cannabinoid receptor-interacting protein 1
CNTF PF01110 Domain 6 60 176.40 48 86.92 Changed Ciliary neurotrophic factor
CNV-Replicase_N PF16688 Domain 1 1 108.00 100 1.61 Changed Replicase polyprotein N-term from Coronavirus nsp1
CN_hydrolase PF00795 Family 52 12262 248.40 19 62.19 Changed Carbon-nitrogen hydrolase
Coa1 PF08695 Family 38 511 112.80 23 58.05 Changed Cytochrome oxidase complex assembly protein 1
COA2 PF17051 Family 2 41 68.70 29 82.96 Changed Cytochrome C oxidase assembly factor 2
CoaE PF01121 Domain 11 3139 174.30 31 73.10 Changed Dephospho-CoA kinase
Coagulase PF08764 Domain 10 5 263.00 21 48.67 Changed Staphylococcus aureus coagulase
Coagulin PF02035 Domain 2 0 0.00 0 0.00 Changed Coagulin
Coatamer_beta_C PF07718 Domain 97 657 138.60 52 14.95 Changed Coatomer beta C-terminal region
CoatB PF10389 Family 7 18 46.80 30 66.69 Changed Bacteriophage coat protein B
Coatomer_b_Cpla PF14806 Domain 56 667 125.80 58 13.87 Changed Coatomer beta subunit appendage platform
Coatomer_E PF04733 Family 7 740 245.80 29 80.84 Changed Coatomer epsilon subunit
Coatomer_g_Cpla PF16381 Domain 68 706 113.00 35 13.09 Changed Coatomer subunit gamma-1 C-terminal appendage platform
Coatomer_WDAD PF04053 Family 54 1652 390.60 32 41.36 Changed Coatomer WD associated region
Coat_F PF07875 Domain 237 613 62.70 24 50.11 Changed Coat F domain
Coat_X PF07552 Domain 31 63 57.70 33 72.28 Changed Spore Coat Protein X and V domain
CoA_binding PF02629 Domain 63 4159 96.50 32 26.10 Changed CoA binding domain
CoA_binding_2 PF13380 Domain 228 2986 122.40 26 25.23 Changed CoA binding domain
CoA_binding_3 PF13727 Domain 34 2466 170.80 15 32.22 Changed CoA-binding domain
CoA_trans PF01144 Domain 40 5184 207.40 26 78.80 Changed Coenzyme A transferase
CoA_transf_3 PF02515 Family 55 6731 331.70 28 82.38 Changed CoA-transferase family III
Cobalamin_bind PF01122 Family 48 215 266.50 29 64.98 Changed Eukaryotic cobalamin-binding protein
CobA_CobO_BtuR PF02572 Domain 494 1572 172.40 36 89.93 Changed ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CobD_Cbib PF03186 Family 544 1366 283.10 31 89.49 Changed CobD/Cbib protein
Cobl PF09469 Domain 4 187 94.70 55 9.94 Changed Cordon-bleu ubiquitin-like domain
CobN-Mg_chel PF02514 Family 346 1371 892.50 30 84.57 Changed CobN/Magnesium Chelatase
COBRA PF04833 Family 91 713 160.20 47 34.23 Changed COBRA-like protein
COBRA1 PF06209 Family 16 217 336.10 32 66.07 Changed Cofactor of BRCA1 (COBRA1)
CobS PF02654 Family 679 1342 232.50 26 91.09 Changed Cobalamin-5-phosphate synthase
CobS_N PF12556 Family 52 250 33.70 48 10.23 Changed Cobaltochelatase CobS subunit N terminal
CobT PF06213 Family 63 295 272.20 26 44.60 Changed Cobalamin biosynthesis protein CobT
CobT_C PF11775 Domain 2 365 186.40 45 32.33 Changed Cobalamin biosynthesis protein CobT VWA domain
CobU PF02283 Domain 129 1385 160.20 32 81.53 Changed Cobinamide kinase / cobinamide phosphate guanyltransferase
cobW PF02492 Domain 43 6456 176.60 25 53.74 Changed CobW/HypB/UreG, nucleotide-binding domain
CobW_C PF07683 Domain 152 3373 98.90 21 25.67 Changed Cobalamin synthesis protein cobW C-terminal domain
Cob_adeno_trans PF01923 Domain 604 1788 163.10 36 81.93 Changed Cobalamin adenosyltransferase
Codanin-1_C PF15296 Family 29 120 116.00 42 10.66 Changed Codanin-1 C-terminus
CodY PF06018 Domain 17 367 175.00 41 67.52 Changed CodY GAF-like domain
COE1_DBD PF16422 Domain 9 453 169.70 71 38.08 Changed Transcription factor COE1 DNA-binding domain
COE1_HLH PF16423 Domain 7 368 43.50 89 8.49 Changed Transcription factor COE1 helix-loop-helix domain
COesterase PF00135 Domain 60 12048 390.50 21 81.32 Changed Carboxylesterase family
Cofac_haem_bdg PF04187 Domain 213 550 200.90 24 48.25 Changed Haem-binding uptake, Tiki superfamily, ChaN
CofC PF01983 Family 3 265 197.20 27 86.82 Changed Guanylyl transferase CofC like
Cofilin_ADF PF00241 Domain 491 3980 121.60 20 49.76 Changed Cofilin/tropomyosin-type actin-binding protein
COG2 PF06148 Family 17 553 132.60 27 23.19 Changed COG (conserved oligomeric Golgi) complex component, COG2
COG4 PF08318 Domain 133 659 291.00 27 38.65 Changed COG4 transport protein
COG5 PF10392 Family 16 478 127.90 28 20.60 Changed Golgi transport complex subunit 5
COG6 PF06419 Domain 114 657 517.10 25 84.80 Changed Conserved oligomeric complex COG6
COG7 PF10191 Family 7 413 496.30 21 86.85 Changed Golgi complex component 7 (COG7)
Cohesin PF00963 Domain 40 526 134.40 15 26.63 Changed Cohesin domain
Cohesin_HEAT PF12765 Family 46 810 38.60 31 2.46 Changed HEAT repeat associated with sister chromatid cohesion
Cohesin_load PF10345 Family 20 445 481.30 24 69.33 Changed Cohesin loading factor
CoiA PF06054 Family 4 311 225.40 20 65.00 Changed Competence protein CoiA-like family
Coiled PF05710 Coiled-coil 36 128 83.60 32 90.37 Changed Coiled coil
Coiled-coil_56 PF09813 Coiled-coil 3 249 78.30 29 65.15 Changed Coiled-coil domain-containing protein 56
Coilin_N PF15862 Family 41 190 180.90 22 32.97 Changed Coilin N-terminus
Coleoptericin PF06286 Family 3 2 141.00 99 100.00 Changed Coleoptericin
COLFI PF01410 Family 21 1421 180.90 37 15.73 Changed Fibrillar collagen C-terminal domain
Colicin PF01024 Domain 4 13 174.90 31 42.58 Changed Colicin pore forming domain
Colicin-DNase PF12639 Domain 21 61 95.90 24 17.08 Changed DNase/tRNase domain of colicin-like bacteriocin
Colicin_D PF11429 Domain 8 22 80.70 31 10.68 Changed Colicin D
Colicin_E5 PF12106 Domain 7 11 86.80 40 7.64 Changed Colicin E5 ribonuclease domain
Colicin_Ia PF11504 Family 3 0 0.00 0 0.00 Changed Colicin Ia
Colicin_im PF03857 Family 4 4 139.20 25 79.69 Changed Colicin immunity protein
Colicin_immun PF09204 Domain 8 33 82.20 25 55.85 Changed Bacterial self-protective colicin-like immunity
Colicin_M PF14859 Family 2 2 191.50 36 70.02 Changed Colicin M
Colicin_Pyocin PF01320 Domain 15 57 76.90 31 83.37 Changed Colicin immunity protein / pyocin immunity protein
Colicin_V PF02674 Family 128 2014 144.80 19 65.71 Changed Colicin V production protein
Colipase PF01114 Domain 7 58 39.00 62 35.80 Changed Colipase, N-terminal domain
Colipase-like PF15083 Family 6 76 72.90 38 79.93 Changed Colipase-like
Colipase_C PF02740 Domain 10 59 43.40 73 39.57 Changed Colipase, C-terminal domain
Collagen PF01391 Repeat 41 39470 63.00 40 31.32 Changed Collagen triple helix repeat (20 copies)
Collagen_bind PF05737 Domain 11 389 130.20 17 23.76 Changed Collagen binding domain
Collagen_bind_2 PF12904 Domain 48 165 90.90 26 17.35 Changed Putative collagen-binding domain of a collagenase
Collagen_mid PF15984 Domain 35 112 178.70 36 46.03 Changed Bacterial collagen, middle region
Collar PF07484 Domain 173 756 55.50 42 22.21 Changed Phage Tail Collar Domain
Collectrin PF16959 Family 43 132 140.20 51 29.03 Changed Renal amino acid transporter
Col_cuticle_N PF01484 Family 337 2740 48.80 24 15.93 Changed Nematode cuticle collagen N-terminal domain
ComA PF02679 Family 108 326 232.40 35 77.93 Changed (2R)-phospho-3-sulfolactate synthase (ComA)
ComC PF03047 Family 6 25 29.30 33 52.58 Changed COMC family
ComFB PF10719 Family 196 344 81.00 27 59.63 Changed Late competence development protein ComFB
ComGF PF15980 Domain 53 163 99.70 17 67.86 Changed Putative Competence protein ComGF
ComGG PF14173 Family 14 36 93.20 19 75.55 Changed ComG operon protein 7
ComJ PF11033 Family 6 24 121.00 27 79.63 Changed Competence protein J (ComJ)
ComK PF06338 Family 23 175 144.30 21 83.70 Changed ComK protein
Comm PF15957 Family 7 58 109.90 31 33.50 Changed Commissureless
COMMD1_N PF17221 Domain 18 94 88.60 56 51.78 New COMMD1 N-terminal domain
COMM_domain PF07258 Domain 259 1207 69.60 20 33.24 Changed COMM domain
Como_LCP PF02247 Domain 10 4 374.50 58 38.23 Changed Large coat protein
Como_SCP PF02248 Domain 10 4 172.20 60 17.59 Changed Small coat protein
COMP PF11598 Family 10 231 43.70 48 5.07 Changed Cartilage oligomeric matrix protein
COMPASS-Shg1 PF05205 Family 92 456 99.70 27 14.43 Changed COMPASS (Complex proteins associated with Set1p) component shg1
Competence PF03772 Family 83 2531 261.60 21 40.80 Changed Competence protein
CompInhib_SCIN PF11546 Family 4 6 102.70 22 82.24 Changed Staphylococcal complement inhibitor SCIN
Complex1_30kDa PF00329 Family 653 2635 122.20 33 40.70 Changed Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Complex1_49kDa PF00346 Family 292 3420 210.20 31 58.35 Changed Respiratory-chain NADH dehydrogenase, 49 Kd subunit
Complex1_51K PF01512 Family 98 3912 164.00 40 32.50 Changed Respiratory-chain NADH dehydrogenase 51 Kd subunit
Complex1_LYR PF05347 Family 175 3110 58.80 23 39.01 Changed Complex 1 protein (LYR family)
Complex1_LYR_1 PF13232 Domain 2 18 86.90 62 41.27 Changed Complex1_LYR-like
Complex1_LYR_2 PF13233 Family 221 941 93.90 20 65.93 Changed Complex1_LYR-like
ComP_DUS PF16732 Domain 115 469 93.50 23 64.86 Changed Type IV minor pilin ComP, DNA uptake sequence receptor
ComX PF05952 Family 3 13 50.90 27 53.82 Changed Bacillus competence pheromone ComX
ComZ PF10815 Family 8 27 53.60 53 75.47 Changed ComZ
Com_YlbF PF06133 Family 378 839 104.60 20 82.56 Changed Control of competence regulator ComK, YlbF/YmcA
Con-6 PF10346 Family 146 462 33.80 44 50.97 Changed Conidiation protein 6
Condensation PF00668 Family 21 16369 397.50 17 37.74 Changed Condensation domain
Condensin2nSMC PF12422 Family 50 238 139.50 35 13.64 Changed Condensin II non structural maintenance of chromosomes subunit
Connexin PF00029 Family 236 1564 207.50 40 68.31 Changed Connexin
Connexin40_C PF16791 Domain 22 76 110.90 47 30.10 Changed Connexin 40 C-terminal domain
Connexin43 PF03508 Family 3 57 19.90 93 5.17 Changed Gap junction alpha-1 protein (Cx43)
Connexin50 PF03509 Family 11 60 66.20 69 14.97 Changed Gap junction alpha-8 protein (Cx50)
Conotoxin PF02950 Domain 98 10 78.60 36 90.55 Changed Conotoxin
Consortin_C PF15281 Family 19 69 107.60 63 19.52 Changed Consortin C-terminus
Cons_hypoth698 PF03601 Family 13 1409 299.10 27 84.88 Changed Conserved hypothetical protein 698
Cons_hypoth95 PF03602 Family 23 2638 172.10 28 81.74 Changed Conserved hypothetical protein 95
CooC_C PF15976 Family 18 53 93.50 26 11.22 Changed CS1-pili formation C-terminal
COOH-NH2_lig PF14395 Family 15 34 243.20 38 49.47 Changed Phage phiEco32-like COOH.NH2 ligase-type 2
COP-gamma_platf PF08752 Domain 152 745 144.80 42 16.88 Changed Coatomer gamma subunit appendage platform subdomain
COP23 PF14218 Family 100 175 140.70 24 62.85 Changed Circadian oscillating protein COP23
CopB PF05275 Family 113 334 201.60 38 63.98 Changed Copper resistance protein B precursor (CopB)
CopC PF04234 Domain 367 881 95.50 28 32.20 Changed CopC domain
CopD PF05425 Family 115 1084 102.80 22 24.44 Changed Copper resistance protein D
CopG_antitoxin PF12441 Domain 16 303 75.10 29 82.81 Changed CopG antitoxin of type II toxin-antitoxin system
COPIIcoated_ERV PF07970 Family 183 1740 197.60 30 51.13 Changed Endoplasmic reticulum vesicle transporter
Copine PF07002 Family 15 2121 196.50 37 39.51 Changed Copine
COPI_assoc PF08507 Family 24 574 132.90 23 70.16 Changed COPI associated protein
COPI_C PF06957 Family 34 771 350.80 32 32.12 Changed Coatomer (COPI) alpha subunit C-terminus
CopK PF11525 Family 8 18 69.20 52 75.79 Changed Copper resistance protein K
Copper-bind PF00127 Domain 31 1169 101.20 24 42.75 Changed Copper binding proteins, plastocyanin/azurin family
Copper-fist PF00649 Domain 64 465 38.70 54 8.51 Changed Copper fist DNA binding domain
COPR5 PF15340 Family 7 44 145.80 76 83.03 Changed Cooperator of PRMT5 family
Coprogen_oxidas PF01218 Family 291 1509 285.70 46 87.94 Changed Coproporphyrinogen III oxidase
Coq4 PF05019 Family 117 834 194.10 32 77.72 Changed Coenzyme Q (ubiquinone) biosynthesis protein Coq4
COQ7 PF03232 Domain 156 870 163.30 33 75.53 Changed Ubiquinone biosynthesis protein COQ7
COQ9 PF08511 Domain 173 630 75.10 37 27.51 Changed COQ9
COR PF16095 Family 47 733 213.90 17 14.61 Changed C-terminal of Roc, COR, domain
Cor1 PF04803 Family 40 198 114.90 35 48.48 Changed Cor1/Xlr/Xmr conserved region
CorA PF01544 Family 58 6260 249.80 15 53.04 Changed CorA-like Mg2+ transporter protein
CorC_HlyC PF03471 Domain 141 5378 81.10 23 19.16 Changed Transporter associated domain
Cornichon PF03311 Family 124 988 118.20 36 79.05 Changed Cornichon protein
Cornifin PF02389 Disordered 3 357 98.30 24 39.45 Changed Cornifin (SPRR) family
Coronavirus_5 PF05528 Family 1 1 82.00 100 100.00 Changed Coronavirus gene 5 protein
Corona_3 PF04694 Family 1 1 59.00 100 83.10 Changed Coronavirus ORF3 protein
Corona_5a PF06336 Family 1 1 64.00 100 98.46 Changed Coronavirus 5a protein
Corona_6B_7B PF03262 Family 1 1 206.00 100 100.00 Changed Coronavirus 6B/7B protein
Corona_7 PF02398 Family 1 1 101.00 100 100.00 Changed Coronavirus protein 7
Corona_I PF03187 Family 1 1 207.00 100 100.00 Changed Corona nucleocapsid I protein
Corona_M PF01635 Family 4 6 219.00 30 95.36 Changed Coronavirus M matrix/glycoprotein
Corona_NS1 PF06145 Family 2 0 0.00 0 0.00 Changed Coronavirus nonstructural protein NS1
Corona_NS2 PF04753 Family 1 1 105.00 100 93.75 Changed Coronavirus non-structural protein NS2
Corona_NS2A PF05213 Family 2 4 200.80 33 6.54 Changed Coronavirus NS2A protein
Corona_NS3b PF03053 Family 4 2 110.50 0 100.00 Changed ORF3b coronavirus protein
Corona_NS4 PF03905 Family 3 1 45.00 100 35.16 Changed Coronavirus non-structural protein NS4
Corona_NS8 PF12093 Family 2 2 58.00 0 94.31 Changed Coronavirus NS8 protein
Corona_NSP4_C PF16348 Domain 5 10 95.90 46 1.67 Changed Coronavirus nonstructural protein 4 C-terminus
Corona_nucleoca PF00937 Family 3 7 295.60 25 86.42 Changed Coronavirus nucleocapsid protein
Corona_RPol_N PF06478 Family 6 6 352.30 52 5.20 Changed Coronavirus RPol N-terminus
Corona_S1 PF01600 Family 3 4 508.00 26 40.81 Changed Coronavirus S1 glycoprotein
Corona_S2 PF01601 Family 4 6 620.20 39 49.23 Changed Coronavirus S2 glycoprotein
CortBP2 PF09727 Family 43 417 158.60 42 17.93 Changed Cortactin-binding protein-2
Cortex-I_coil PF09304 Coiled-coil 3 9 105.70 52 18.63 Changed Cortexillin I, coiled coil
Cortexin PF11057 Family 6 140 73.80 57 89.69 Changed Cortexin of kidney
Costars PF14705 Domain 76 368 75.70 45 35.82 Changed Costars
CotE PF10628 Family 47 133 173.10 40 94.84 Changed Outer spore coat protein E (CotE)
CotH PF08757 Family 39 700 307.60 16 49.67 Changed CotH protein
CotJA PF11007 Family 172 309 35.20 38 39.47 Changed Spore coat associated protein JA (CotJA)
CotJB PF12652 Domain 245 377 76.70 36 76.62 Changed CotJB protein
Couple_hipA PF13657 Domain 107 1119 102.80 22 27.13 Changed HipA N-terminal domain
COX1 PF00115 Family 721 4176 419.10 31 74.93 Changed Cytochrome C and Quinol oxidase polypeptide I
COX14 PF14880 Family 37 304 57.50 24 29.98 Changed Cytochrome oxidase c assembly
COX15-CtaA PF02628 Family 64 2007 264.90 24 79.86 Changed Cytochrome oxidase assembly protein
COX16 PF14138 Family 105 469 79.40 35 53.93 Changed Cytochrome c oxidase assembly protein COX16
COX17 PF05051 Family 103 510 46.70 49 53.64 Changed Cytochrome C oxidase copper chaperone (COX17)
COX2 PF00116 Domain 12 2352 101.00 30 32.84 Changed Cytochrome C oxidase subunit II, periplasmic domain
COX2-transmemb PF09125 Domain 1 4 37.00 46 23.64 Changed Cytochrome C oxidase subunit II, transmembrane
COX2_TM PF02790 Family 11 1311 84.90 24 26.72 Changed Cytochrome C oxidase subunit II, transmembrane domain
COX3 PF00510 Family 8 2639 194.10 27 84.76 Changed Cytochrome c oxidase subunit III
COX4 PF02936 Family 99 566 128.50 31 73.26 Changed Cytochrome c oxidase subunit IV
COX4_pro PF03626 Family 408 991 74.40 23 65.81 Changed Prokaryotic Cytochrome C oxidase subunit IV
COX4_pro_2 PF07835 Domain 38 155 41.30 29 67.76 Changed Bacterial aa3 type cytochrome c oxidase subunit IV
COX5A PF02284 Domain 58 460 99.20 52 63.83 Changed Cytochrome c oxidase subunit Va
COX5B PF01215 Domain 22 687 115.50 33 63.35 Changed Cytochrome c oxidase subunit Vb
COX6A PF02046 Family 47 549 100.20 34 78.27 Changed Cytochrome c oxidase subunit VIa
COX6B PF02297 Domain 57 1180 66.90 31 51.58 Changed Cytochrome oxidase c subunit VIb
COX6C PF02937 Family 47 175 68.10 37 69.53 Changed Cytochrome c oxidase subunit VIc
COX7a PF02238 Family 85 545 51.90 30 57.08 Changed Cytochrome c oxidase subunit VII
COX7B PF05392 Family 19 75 75.40 66 92.84 Changed Cytochrome C oxidase chain VIIB
COX7C PF02935 Family 81 386 64.70 33 63.21 Changed Cytochrome c oxidase subunit VIIc
COX8 PF02285 Family 36 108 42.00 38 53.71 Changed Cytochrome oxidase c subunit VIII
COXG PF06240 Family 12 595 140.20 25 56.65 Changed Carbon monoxide dehydrogenase subunit G (CoxG)
CoxIIa PF08113 Family 4 24 32.00 44 66.23 Changed Cytochrome c oxidase subunit IIa family
COX_ARM PF06481 Motif 139 390 45.80 34 14.11 Changed COX Aromatic Rich Motif
Co_AT_N PF12557 Family 93 324 25.40 36 12.23 Changed Cob(I)alamin adenosyltransferase N terminal
CO_deh_flav_C PF03450 Domain 112 3115 101.80 24 14.90 Changed CO dehydrogenase flavoprotein C-terminal domain
CO_dh PF02552 Family 6 88 163.60 26 72.46 Changed CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
CP12 PF02672 Family 99 387 62.70 39 36.50 Changed CP12 domain
CP2 PF04516 Family 12 957 205.00 35 34.86 Changed CP2 transcription factor
CpcD PF01383 Domain 116 352 54.10 35 24.11 Changed CpcD/allophycocyanin linker domain
CPCFC PF17223 Family 19 74 17.00 70 24.59 New Cuticle protein CPCFC
CPDase PF07823 Domain 7 212 181.90 21 86.29 Changed Cyclic phosphodiesterase-like protein
CpeS PF09367 Domain 49 226 161.40 31 88.50 Changed CpeS-like protein
CpeT PF06206 Family 72 253 174.10 31 76.21 Changed CpeT/CpcT family (DUF1001)
CPG4 PF15481 Family 20 128 90.90 22 27.84 Changed Chondroitin proteoglycan 4
CPL PF08144 Domain 64 520 137.30 26 20.93 Changed CPL (NUC119) domain
Cpl-7 PF08230 Domain 32 116 38.50 52 18.35 Changed Cpl-7 lysozyme C-terminal domain
Cpn10 PF00166 Domain 39 4252 90.90 41 84.14 Changed Chaperonin 10 Kd subunit
Cpn60_TCP1 PF00118 Family 57 12754 429.30 26 72.42 Changed TCP-1/cpn60 chaperonin family
CPP1-like PF11833 Family 82 420 168.20 28 65.97 Changed Protein CHAPERONE-LIKE PROTEIN OF POR1-like
CppA_C PF14507 Family 14 46 105.60 32 41.94 Changed CppA C-terminal
CppA_N PF14506 Family 5 40 119.10 37 47.51 Changed CppA N-terminal
CPSase_L_D2 PF02786 Domain 16 14470 201.80 31 27.04 Changed Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D3 PF02787 Domain 1106 3417 121.40 38 10.01 Changed Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPSase_sm_chain PF00988 Domain 753 3283 131.10 46 20.17 Changed Carbamoyl-phosphate synthase small chain, CPSase domain
CPSF100_C PF13299 Family 109 550 144.10 28 17.55 Changed Cleavage and polyadenylation factor 2 C-terminal
CPSF73-100_C PF11718 Domain 162 633 233.40 26 32.25 Changed Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
CPSF_A PF03178 Family 65 2068 297.80 22 25.92 Changed CPSF A subunit region
CPT PF07931 Domain 7 231 154.90 25 75.57 Changed Chloramphenicol phosphotransferase-like protein
Cpta_toxin PF07254 Family 14 72 119.10 35 93.66 Changed Membrane-bound toxin component of toxin-antitoxin system
CPT_N PF16484 Domain 31 282 46.90 59 6.53 Changed Carnitine O-palmitoyltransferase N-terminus
CPW_WPC PF09717 Domain 164 669 60.40 28 49.93 Changed Plasmodium falciparum domain of unknown function (CPW_WPC)
CpxA_peri PF16527 Domain 10 88 117.40 41 26.05 Changed Two-component sensor protein CpxA, periplasmic domain
CpXC PF14353 Family 50 113 124.30 22 50.85 Changed CpXC protein
CP_ATPgrasp_1 PF04174 Family 9 42 291.00 53 54.19 Changed A circularly permuted ATPgrasp
CP_ATPgrasp_2 PF14403 Family 345 972 373.80 43 62.08 Changed Circularly permuted ATP-grasp type 2
CR6_interact PF10147 Family 8 136 183.10 29 82.57 Changed Growth arrest and DNA-damage-inducible proteins-interacting protein 1
CRA PF06589 Family 3 14 130.90 46 95.87 Changed Circumsporozoite-related antigen (CRA)
CRAL_TRIO PF00650 Domain 104 7576 152.90 19 33.62 Changed CRAL/TRIO domain
CRAL_TRIO_2 PF13716 Domain 63 1827 132.00 23 14.29 Changed Divergent CRAL/TRIO domain
CRAL_TRIO_N PF03765 Domain 261 3402 61.40 24 13.79 Changed CRAL/TRIO, N-terminal domain
CRAM_rpt PF07016 Repeat 2 82 21.90 89 133.73 Changed Cysteine-rich acidic integral membrane protein precursor
CRA_rpt PF07046 Repeat 5 84 40.60 82 76.40 Changed Cytoplasmic repetitive antigen (CRA) like repeat
CRCB PF02537 Family 973 3195 116.40 27 73.14 Changed CrcB-like protein, Camphor Resistance (CrcB)
CRC_subunit PF08624 Family 73 498 131.70 53 22.99 Changed Chromatin remodelling complex Rsc7/Swp82 subunit
CreA PF05981 Family 82 391 127.60 43 74.64 Changed CreA protein
Creatinase_N PF01321 Domain 101 4624 134.90 18 28.99 Changed Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 Domain 682 1772 162.60 30 26.49 Changed Creatinase/Prolidase N-terminal domain
Creatininase PF02633 Family 451 1151 232.70 25 89.91 Changed Creatinine amidohydrolase
Creb_binding PF09030 Domain 35 190 112.00 50 5.13 Changed Creb binding
CreD PF06123 Family 86 235 407.70 32 93.56 Changed Inner membrane protein CreD
Cren7 PF11520 Family 8 29 56.80 51 92.06 Changed Chromatin protein Cren7
CREPT PF16566 Domain 32 348 134.40 35 24.96 Changed Cell-cycle alteration and expression-elevated protein in tumour
CReP_N PF10472 Domain 11 41 345.20 57 52.96 Changed eIF2-alpha phosphatase phosphorylation constitutive repressor
CRF PF00473 Family 26 210 38.20 42 18.55 Changed Corticotropin-releasing factor family
CRF-BP PF05428 Family 16 112 267.70 43 88.17 Changed Corticotropin-releasing factor binding protein (CRF-BP)
CRF1 PF10380 Family 14 50 122.50 39 15.50 Changed Transcription factor CRF1
CRIC_ras_sig PF10534 Domain 38 319 90.40 44 11.18 Changed Connector enhancer of kinase suppressor of ras
CRIM PF16978 Family 102 450 144.10 31 19.74 Changed SAPK-interacting protein 1 (Sin1), middle CRIM domain
Crinivirus_P26 PF07416 Family 1 1 227.00 100 100.00 Changed Crinivirus P26 protein
Cript PF10235 Family 51 371 89.60 42 73.42 Changed Microtubule-associated protein CRIPT
Crisp PF08562 Domain 74 160 55.80 45 23.12 Changed Crisp
CRISPR_assoc PF08798 Domain 112 276 216.40 25 97.27 Changed CRISPR associated protein
CRISPR_Cas2 PF09827 Family 419 1568 74.10 23 65.96 Changed CRISPR associated protein Cas2
CRISPR_Cse1 PF09481 Family 108 247 468.40 19 86.00 Changed CRISPR-associated protein Cse1 (CRISPR_cse1)
CRISPR_Cse2 PF09485 Family 103 244 148.20 21 72.82 Changed CRISPR-associated protein Cse2 (CRISPR_cse2)
Crl PF07417 Family 25 87 119.10 49 87.35 Changed Transcriptional regulator Crl
CRM1_C PF08767 Domain 25 837 286.30 34 28.53 Changed CRM1 C terminal
Cro PF09048 Domain 6 18 58.40 48 88.17 Changed Cro
Crp PF00325 Domain 12 329 31.20 57 14.02 Changed Bacterial regulatory proteins, crp family
CRPA PF05745 Family 5 3 122.30 43 83.03 Changed Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
CRPV_capsid PF08762 Domain 7 5 217.80 16 12.93 Changed CRPV capsid protein like
CRR7 PF12095 Family 61 126 82.10 43 68.69 Changed Protein CHLORORESPIRATORY REDUCTION 7
CRS1_YhbY PF01985 Domain 588 3075 83.80 25 38.59 Changed CRS1 / YhbY (CRM) domain
CRT-like PF08627 Family 11 407 266.90 26 66.05 Changed CRT-like, chloroquine-resistance transporter-like
CRT10 PF08728 Family 9 261 294.40 14 50.49 Changed CRT10
CrtC PF07143 Domain 142 369 171.80 28 42.55 Changed CrtC N-terminal lipocalin domain
Crust_neurohorm PF01147 Family 14 122 62.60 36 51.52 Changed Crustacean CHH/MIH/GIH neurohormone family
Crust_neuro_H PF03858 Family 8 0 0.00 0 0.00 Changed Crustacean neurohormone H
CryBP1 PF07029 Family 1 4 144.80 35 51.88 Changed CryBP1 protein
Cryptochrome_C PF12546 Family 20 93 118.10 46 18.06 Changed Blue/Ultraviolet sensing protein C terminal
Crystall PF00030 Domain 99 3703 81.10 32 55.20 Changed Beta/Gamma crystallin
Crystallin PF00525 Family 13 196 54.00 50 29.81 Changed Alpha crystallin A chain, N terminal
Crystall_2 PF09076 Domain 7 23 70.90 40 61.57 Changed Beta/Gamma crystallin
Crystall_3 PF08964 Domain 10 28 84.10 26 32.92 Changed Beta/Gamma crystallin
CS PF04969 Domain 72 3853 77.50 20 22.89 Changed CS domain
CsbD PF05532 Domain 92 1495 52.80 31 69.85 Changed CsbD-like
CSD PF00313 Domain 34 8602 65.10 39 53.24 Changed 'Cold-shock' DNA-binding domain
Cse1 PF08506 Domain 15 1240 290.80 22 31.22 Changed Cse1
CSF-1 PF05337 Domain 5 66 131.30 59 30.14 Changed Macrophage colony stimulating factor-1 (CSF-1)
CSG2 PF16965 Family 12 64 309.40 29 76.66 Changed Ceramide synthase regulator
CsgE PF10627 Family 20 90 101.40 27 64.77 Changed Curli assembly protein CsgE
CsgF PF10614 Family 13 110 124.50 33 92.24 Changed Type VIII secretion system (T8SS), CsgF protein
CsgG PF03783 Family 18 509 178.20 20 54.98 Changed Curli production assembly/transport component CsgG
CsiD PF08943 Domain 15 48 273.30 49 89.14 Changed CsiD
CsiV PF10972 Family 23 153 214.90 21 90.42 Changed Peptidoglycan-binding protein, CsiV
Csm1 PF12539 Family 74 243 89.70 40 18.92 Changed Chromosome segregation protein Csm1/Pcs1
CSM2 PF16834 Domain 13 27 185.70 36 93.46 Changed Shu complex component Csm2, DNA-binding
CSN8_PSD8_EIF3K PF10075 Family 33 1524 139.90 20 54.39 Changed CSN8/PSMD8/EIF3K family
CsoS2_M PF12288 Family 11 67 292.60 30 66.73 Changed Carboxysome shell peptide mid-region
CsoSCA PF08936 Domain 24 59 363.60 31 78.13 Changed Carboxysome Shell Carbonic Anhydrase
CsrA PF02599 Family 280 976 52.70 49 70.76 Changed Global regulator protein family
CSRNP_N PF16019 Family 33 334 186.60 48 36.67 Changed Cysteine/serine-rich nuclear protein N-terminus
CSS-motif PF12792 Domain 82 287 190.80 14 37.81 Changed CSS motif domain associated with EAL
CssAB PF16831 Domain 1 0 0.00 0 0.00 Changed CS6 fimbrial subunits A and B, Coli surface antigen 6
CST-I PF06002 Family 3 16 238.30 32 85.21 Changed Alpha-2,3-sialyltransferase (CST-I)
CstA PF02554 Family 53 1620 278.30 31 60.43 Changed Carbon starvation protein CstA
CstA_5TM PF13722 Domain 223 1256 122.30 32 20.66 Changed 5TM C-terminal transporter carbon starvation CstA
CSTF1_dimer PF16699 Domain 29 183 56.10 46 13.93 Changed Cleavage stimulation factor subunit 1, dimerisation domain
CSTF2_hinge PF14327 Family 107 805 77.70 34 18.63 Changed Hinge domain of cleavage stimulation factor subunit 2
CSTF_C PF14304 Domain 22 685 39.40 42 9.39 Changed Transcription termination and cleavage factor C-terminal
CT47 PF15623 Family 11 45 242.20 46 91.10 Changed Cancer/testis gene family 47
CtaG_Cox11 PF04442 Family 234 1057 145.50 44 62.66 Changed Cytochrome c oxidase assembly protein CtaG/Cox11
CTC1 PF15489 Family 11 117 636.80 31 84.53 Changed CST, telomere maintenance, complex subunit CTC1
CTC1_2 PF15491 Family 11 79 277.90 43 26.96 Changed CST, telomere maintenance, complex subunit CTC1
CTD PF12815 Repeat 27 392 81.10 38 11.95 Changed Spt5 C-terminal nonapeptide repeat binding Spt4
CTD_bind PF04818 Family 284 2299 63.90 25 8.52 Changed RNA polymerase II-binding domain.
Ctf8 PF09696 Family 67 467 105.30 28 69.08 Changed Ctf8
CTF_NFI PF00859 Family 14 407 239.50 50 56.74 Changed CTF/NF-I family transcription modulation region
Cthe_2159 PF14262 Family 67 432 200.80 26 57.07 Changed Carbohydrate-binding domain-containing protein Cthe_2159
CTI PF06934 Family 46 103 658.10 42 88.02 Changed Fatty acid cis/trans isomerase (CTI)
CtIP_N PF10482 Domain 22 134 112.60 62 16.59 Changed Tumour-suppressor protein CtIP N-terminal domain
CTK3 PF12243 Domain 7 248 122.60 48 40.95 Changed CTD kinase subunit gamma CTK3
CTK3_C PF12350 Domain 63 270 70.00 42 23.09 Changed CTD kinase subunit gamma CTK3 C-terminus
CtkA_N PF16948 Domain 21 45 85.80 41 31.28 Changed Cell translocating kinase A N-terminus
CtnDOT_TraJ PF07863 Family 13 166 62.70 46 18.99 Changed Homologues of TraJ from Bacteroides conjugative transposon
CTNNB1_binding PF08347 Family 23 459 157.40 41 39.51 Changed N-terminal CTNNB1 binding
CTNNBL PF08216 Domain 108 520 101.00 41 18.41 Changed Catenin-beta-like, Arm-motif containing nuclear
CTP-dep_RFKase PF01982 Family 94 136 121.20 39 59.72 Changed Domain of unknown function DUF120
CTP_synth_N PF06418 Domain 481 3694 254.50 53 47.03 Changed CTP synthase N-terminus
CTP_transf_1 PF01148 Family 36 3655 269.90 24 84.32 Changed Cytidylyltransferase family
CTP_transf_3 PF02348 Family 13 2596 211.70 23 78.93 Changed Cytidylyltransferase
CTP_transf_like PF01467 Domain 65 10678 143.70 18 56.59 Changed Cytidylyltransferase-like
Ctr PF04145 Family 446 2149 118.10 22 64.28 Changed Ctr copper transporter family
CtsR PF05848 Family 165 372 147.30 41 95.77 Changed Firmicute transcriptional repressor of class III stress genes (CtsR)
CTU2 PF10288 Family 109 418 100.40 24 23.07 Changed Cytoplasmic tRNA 2-thiolation protein 2
CTV_P13 PF06922 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus P13 protein
CTV_P23 PF04808 Family 3 0 0.00 0 0.00 Changed Citrus tristeza virus (CTV) P23 protein
CTV_P33 PF07184 Family 2 0 0.00 0 0.00 Changed Citrus tristeza virus P33 protein
CTV_P6 PF06706 Family 2 0 0.00 0 0.00 Changed Citrus tristeza virus 6-kDa protein
CTXphi_pIII-N1 PF16710 Domain 1 1 111.00 100 28.10 Changed N-terminal N1 domain of Vibrio phage CTXphi pIII
CTX_RstB PF07459 Family 1 9 103.10 30 95.67 Changed CTX phage RstB protein
CT_A_B PF02626 Family 656 1574 260.90 33 42.13 Changed Carboxyltransferase domain, subdomain A and B
CT_C_D PF02682 Family 105 1547 206.30 29 35.66 Changed Carboxyltransferase domain, subdomain C and D
Cu-binding_MopE PF11617 Repeat 55 908 25.90 41 13.91 Changed Putative metal-binding motif
Cu-oxidase PF00394 Domain 72 6683 150.70 21 26.08 Changed Multicopper oxidase
Cu-oxidase_2 PF07731 Domain 127 8103 134.60 21 23.34 Changed Multicopper oxidase
Cu-oxidase_3 PF07732 Domain 88 8764 111.70 28 20.15 Changed Multicopper oxidase
Cu-oxidase_4 PF02578 Family 720 2031 224.20 29 87.23 Changed Multi-copper polyphenol oxidoreductase laccase
Cu2_monooxygen PF01082 Domain 143 633 120.50 29 20.14 Changed Copper type II ascorbate-dependent monooxygenase, N-terminal domain
Cu2_monoox_C PF03712 Domain 68 706 142.70 28 24.73 Changed Copper type II ascorbate-dependent monooxygenase, C-terminal domain
CUB PF00431 Domain 24 16136 107.70 25 31.61 Changed CUB domain
CUB_2 PF02408 Domain 24 271 113.60 20 26.13 Changed CUB-like domain
Cucumo_2B PF03263 Family 1 1 105.00 100 95.45 Changed Cucumovirus protein 2B
Cucumo_coat PF00760 Domain 1 2 198.00 24 42.95 Changed Cucumovirus coat protein
CUE PF02845 Family 123 2650 41.00 24 7.75 Changed CUE domain
Cul7 PF11515 Family 27 227 74.80 53 2.57 Changed Mouse development and cellular proliferation protein Cullin-7
Cullin PF00888 Family 417 4047 470.10 21 65.96 Changed Cullin family
Cullin_binding PF03556 Family 211 1257 112.60 34 41.42 Changed Cullin binding
Cullin_Nedd8 PF10557 Domain 410 2651 62.40 44 7.64 Changed Cullin protein neddylation domain
Cupin_1 PF00190 Domain 65 5500 139.00 22 61.66 Changed Cupin
Cupin_2 PF07883 Domain 156 13198 70.80 19 40.04 Changed Cupin domain
Cupin_3 PF05899 Domain 32 1145 74.20 26 53.29 Changed Protein of unknown function (DUF861)
Cupin_4 PF08007 Family 26 1092 271.30 20 53.22 Changed Cupin superfamily protein
Cupin_5 PF06172 Domain 324 891 140.50 35 77.74 Changed Cupin superfamily (DUF985)
Cupin_6 PF12852 Domain 99 977 177.10 22 57.74 Changed Cupin
Cupin_7 PF12973 Domain 44 881 89.80 25 53.76 Changed ChrR Cupin-like domain
Cupin_8 PF13621 Domain 54 3536 240.80 18 49.99 Changed Cupin-like domain
Cupredoxin_1 PF13473 Domain 60 1644 108.90 17 41.22 Changed Cupredoxin-like domain
Curlin_rpt PF07012 Repeat 96 738 33.90 33 34.41 Changed Curlin associated repeat
Curto_V2 PF07325 Family 2 2 111.50 65 100.00 Changed Curtovirus V2 protein
Curto_V3 PF07436 Family 1 2 86.50 69 97.74 Changed Curtovirus V3 protein
CusF_Ec PF11604 Family 246 629 66.20 30 26.62 Changed Copper binding periplasmic protein CusF
CUT PF02376 Domain 43 1454 78.00 37 18.26 Changed CUT domain
Cut12 PF11500 Domain 35 164 147.60 34 21.23 Changed Spindle pole body formation-associated protein
Cut8 PF08559 Family 88 319 230.50 29 66.54 Changed Cut8, nuclear proteasome tether protein
CutA1 PF03091 Family 489 1204 95.70 34 74.14 Changed CutA1 divalent ion tolerance protein
CutC PF03932 Domain 8 1121 194.50 35 79.29 Changed CutC family
Cuticle_1 PF08140 Family 38 0 0.00 0 0.00 Changed Crustacean cuticle protein repeat
Cuticle_2 PF08184 Family 3 0 0.00 0 0.00 Changed Cuticle protein 7 isoform family
Cuticle_3 PF11018 Family 7 133 111.90 29 58.61 Changed Pupal cuticle protein C1
Cuticle_4 PF15955 Family 31 132 86.10 40 58.96 Changed Cuticle protein
Cutinase PF01083 Domain 15 1639 184.60 25 67.87 Changed Cutinase
CUTL PF16557 Domain 5 168 71.00 86 10.12 Changed CUT1-like DNA-binding domain of SATB
Cu_amine_oxid PF01179 Domain 334 2181 360.10 33 57.18 Changed Copper amine oxidase, enzyme domain
Cu_amine_oxidN1 PF07833 Domain 116 2569 86.20 20 24.55 Changed Copper amine oxidase N-terminal domain
Cu_amine_oxidN2 PF02727 Domain 9 1382 88.20 25 12.84 Changed Copper amine oxidase, N2 domain
Cu_amine_oxidN3 PF02728 Domain 12 1272 99.80 24 14.51 Changed Copper amine oxidase, N3 domain
Cu_bind_like PF02298 Domain 15 3213 82.40 31 44.83 Changed Plastocyanin-like domain
CVNH PF08881 Domain 136 655 103.40 24 49.57 Changed CVNH domain
CWC25 PF12542 Family 125 550 92.90 32 22.23 Changed Pre-mRNA splicing factor
cwf18 PF08315 Family 148 539 131.90 33 68.70 Changed cwf18 pre-mRNA splicing factor
cwf21 PF08312 Domain 177 867 46.50 38 7.46 Changed cwf21 domain
CwfJ_C_1 PF04677 Family 8 1077 126.10 28 20.84 Changed Protein similar to CwfJ C-terminus 1
CwfJ_C_2 PF04676 Family 164 1034 99.10 26 16.43 Changed Protein similar to CwfJ C-terminus 2
Cwf_Cwc_15 PF04889 Family 105 665 202.80 38 92.94 Changed Cwf15/Cwc15 cell cycle control protein
CwsA PF10814 Family 8 25 124.40 51 93.65 Changed Cell wall synthesis protein CwsA
CW_binding_1 PF01473 Repeat 211 6474 18.50 38 14.82 Changed Putative cell wall binding repeat
CW_binding_2 PF04122 Repeat 976 1842 89.80 28 33.41 Changed Putative cell wall binding repeat 2
CX PF01705 Family 64 199 58.20 29 23.64 Changed CX module
CX9C PF16860 Domain 39 195 43.30 29 41.26 Changed CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
CXCL17 PF15211 Family 12 33 80.60 65 71.52 Changed VEGF co-regulated chemokine 1
CXCR4_N PF12109 Domain 8 55 33.10 72 9.45 Changed CXCR4 Chemokine receptor N terminal
CXCXC PF03128 Repeat 39 233 12.70 53 7.18 Changed CXCXC repeat
CxxCxxCC PF03692 Family 35 2398 95.90 20 54.30 Changed Putative zinc- or iron-chelating domain
Cyanate_lyase PF02560 Domain 75 591 68.20 54 43.10 Changed Cyanate lyase C-terminal domain
CybS PF05328 Family 35 533 126.00 33 73.49 Changed CybS, succinate dehydrogenase cytochrome B small subunit
Cyc-maltodext_C PF10438 Domain 97 188 76.50 32 12.83 Changed Cyclo-malto-dextrinase C-terminal domain
Cyc-maltodext_N PF09087 Domain 90 188 86.00 36 13.93 Changed Cyclomaltodextrinase, N-terminal
Cyclase PF04199 Family 443 2820 178.50 18 64.04 Changed Putative cyclase
Cyclase_polyket PF04673 Domain 41 125 102.30 50 90.91 Changed Polyketide synthesis cyclase
Cyclin PF08613 Family 6 2576 146.60 23 37.92 Changed Cyclin
Cyclin_C PF02984 Domain 239 5071 116.00 19 27.40 Changed Cyclin, C-terminal domain
Cyclin_C_2 PF16899 Domain 105 667 114.60 24 32.09 Changed Cyclin C-terminal domain
Cyclin_N PF00134 Domain 95 10380 124.50 20 30.77 Changed Cyclin, N-terminal domain
Cyclin_N2 PF16500 Family 16 77 128.70 43 29.91 Changed N-terminal region of cyclin_N
Cyclophil_like PF04126 Family 13 208 114.10 22 73.33 Changed Cyclophilin-like
Cyclotide PF03784 Domain 30 5 29.40 48 35.68 Changed Cyclotide family
Cyd_oper_YbgE PF09600 Family 43 122 78.20 36 81.57 Changed Cyd operon protein YbgE (Cyd_oper_YbgE)
CYLD_phos_site PF16607 Disordered 7 71 151.70 68 16.99 Changed Phosphorylation region of CYLD, unstructured
Cylicin_N PF15241 Family 25 73 105.20 53 22.68 Changed Cylicin N-terminus
CymA PF16941 Family 2 2 342.50 60 99.71 Changed Putative cyclodextrin porin
Cypo_polyhedrin PF05865 Family 1 1 248.00 100 100.00 Changed Cypovirus polyhedrin protein
CysG_dimeriser PF10414 Domain 191 568 57.00 28 13.46 Changed Sirohaem synthase dimerisation region
Cystatin PF00031 Domain 35 1618 90.00 17 49.31 Changed Cystatin domain
CYSTM PF12734 Family 47 635 52.80 33 56.25 Changed Cysteine-rich TM module stress tolerance
Cys_knot PF00007 Domain 24 918 96.10 26 33.66 Changed Cystine-knot domain
Cys_Met_Meta_PP PF01053 Domain 27 8756 364.60 32 88.89 Changed Cys/Met metabolism PLP-dependent enzyme
Cys_rich_CPCC PF14206 Family 31 127 68.60 34 55.54 Changed Cysteine-rich CPCC
Cys_rich_CPXG PF14255 Family 77 262 51.00 37 77.92 Changed Cysteine-rich CPXCG
Cys_rich_CWC PF14375 Family 60 160 49.30 33 55.88 Changed Cysteine-rich CWC
Cys_rich_FGFR PF00839 Family 73 2497 59.70 24 72.91 Changed Cysteine rich repeat
Cys_rich_KTR PF14205 Family 19 72 52.20 51 77.51 Changed Cysteine-rich KTR
Cys_rich_VLP PF14194 Family 22 113 55.10 52 42.49 Changed Cysteine-rich VLP
Cyt-b5 PF00173 Domain 85 9643 81.20 26 16.93 Changed Cytochrome b5-like Heme/Steroid binding domain
CytadhesinP1 PF12378 Family 8 11 70.70 36 17.75 Changed Trypsin-sensitive surface-exposed protein
Cytadhesin_P30 PF07271 Family 2 6 176.50 17 34.74 Changed Cytadhesin P30/P32
CytB6-F_Fe-S PF08802 Domain 10 243 37.80 45 19.32 Changed Cytochrome B6-F complex Fe-S subunit
CYTH PF01928 Domain 51 2280 169.90 16 59.70 Changed CYTH domain
Cytidylate_kin PF02224 Domain 12 2386 205.00 38 81.28 Changed Cytidylate kinase
Cytidylate_kin2 PF13189 Domain 59 1342 168.90 27 73.27 Changed Cytidylate kinase-like family
CYTL1 PF15153 Family 11 62 121.40 55 89.82 Changed Cytokine-like protein 1
CytochromB561_N PF09786 Family 17 284 460.80 25 84.91 Changed Cytochrome B561, N terminal
Cytochrome-c551 PF10643 Family 5 12 184.40 41 78.56 Changed Photosystem P840 reaction-centre cytochrome c-551
Cytochrome_B PF00033 Domain 8 1314 179.90 42 50.07 Changed Cytochrome b/b6/petB
Cytochrome_C554 PF13435 Family 38 769 70.20 17 16.58 Changed Cytochrome c554 and c-prime
Cytochrome_C7 PF14522 Family 79 497 78.30 25 28.09 Changed Cytochrome c7 and related cytochrome c
Cytochrome_cB PF11783 Family 58 109 169.10 37 32.12 Changed Cytochrome c bacterial
Cytochrome_CBB3 PF13442 Domain 169 6972 79.70 23 30.55 Changed Cytochrome C oxidase, cbb3-type, subunit III
Cytochrome_P460 PF16694 Domain 77 203 125.30 23 64.27 Changed Cytochrome P460
Cytochrom_B558a PF05038 Family 8 86 157.50 55 87.73 Changed Cytochrome Cytochrome b558 alpha-subunit
Cytochrom_B559 PF00283 Family 17 280 28.80 53 42.44 Changed Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
Cytochrom_B559a PF00284 Family 40 172 37.90 64 42.48 Changed Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrom_B561 PF03188 Family 39 2511 131.10 22 37.69 Changed Eukaryotic cytochrome b561
Cytochrom_B562 PF07361 Family 47 112 101.30 29 74.37 Changed Cytochrome b562
Cytochrom_B_C PF00032 Domain 190 1219 103.80 35 28.51 Changed Cytochrome b(C-terminal)/b6/petD
Cytochrom_B_N_2 PF13631 Domain 33 440 172.80 46 33.69 Changed Cytochrome b(N-terminal)/b6/petB
Cytochrom_C PF00034 Domain 66 7104 97.80 18 35.69 Changed Cytochrome c
Cytochrom_C1 PF02167 Family 59 1315 207.10 38 71.38 Changed Cytochrome C1 family
Cytochrom_c3_2 PF14537 Family 49 317 88.40 24 30.97 Changed Cytochrome c3
Cytochrom_C550 PF14495 Domain 27 102 134.00 45 78.89 Changed Cytochrome c-550 domain
Cytochrom_C552 PF02335 Family 26 339 389.70 32 83.35 Changed Cytochrome c552
Cytochrom_CIII PF02085 Domain 22 413 93.00 20 45.65 Changed Class III cytochrome C family
Cytochrom_C_2 PF01322 Domain 144 495 112.30 21 70.96 Changed Cytochrome C'
Cytochrom_C_asm PF01578 Family 39 3654 204.00 21 49.98 Changed Cytochrome C assembly protein
Cytochrom_D1 PF02239 Domain 8 478 241.60 21 54.39 Changed Cytochrome D1 heme domain
Cytochrom_NNT PF03264 Family 68 735 159.50 28 62.84 Changed NapC/NirT cytochrome c family, N-terminal region
CytoC_RC PF02276 Family 18 82 240.70 33 78.90 Changed Photosynthetic reaction centre cytochrome C subunit
Cytokin-bind PF09265 Domain 83 604 242.20 39 52.12 Changed Cytokinin dehydrogenase 1, FAD and cytokinin binding
Cytokin_check_N PF10407 Family 39 119 68.80 28 6.93 Changed Cdc14 phosphatase binding protein N-terminus
Cytomega_gL PF01801 Family 3 4 217.80 39 82.79 Changed Cytomegalovirus glycoprotein L
Cytomega_TRL10 PF06084 Family 5 2 117.50 21 56.76 Changed Cytomegalovirus TRL10 protein
Cytomega_UL20A PF05984 Family 1 1 103.00 100 98.10 Changed Cytomegalovirus UL20A protein
Cytomega_UL84 PF06284 Family 1 1 586.00 100 99.83 Changed Cytomegalovirus UL84 protein
Cytomega_US3 PF05963 Family 2 2 185.50 26 96.36 Changed Cytomegalovirus US3 protein
Cytotoxic PF09000 Domain 7 35 73.90 34 18.11 Changed Cytotoxic
Cyto_heme_lyase PF01265 Family 60 875 231.20 36 82.32 Changed Cytochrome c/c1 heme lyase
Cyt_b-c1_8 PF10890 Family 8 94 70.10 69 80.59 Changed Cytochrome b-c1 complex subunit 8
Cyt_bd_oxida_I PF01654 Family 635 1992 430.70 35 91.29 Changed Cytochrome bd terminal oxidase subunit I
Cyt_bd_oxida_II PF02322 Family 713 1865 325.00 30 93.89 Changed Cytochrome bd terminal oxidase subunit II
Cyt_c_ox_IV PF12270 Family 54 294 132.70 40 95.90 Changed Cytochrome c oxidase subunit IV
CYYR1 PF10873 Family 6 54 127.90 65 82.81 Changed Cysteine and tyrosine-rich protein 1
CZB PF13682 Domain 384 640 67.10 23 14.11 Changed Chemoreceptor zinc-binding domain
CzcE PF16986 Domain 15 34 78.90 33 61.74 Changed Heavy-metal resistance protein CzcE
C_GCAxxG_C_C PF09719 Family 394 753 121.10 25 75.88 Changed Putative redox-active protein (C_GCAxxG_C_C)
C_Hendra PF16821 Family 9 1 153.00 100 92.17 Changed C protein from hendra and measles viruses
C_tripleX PF02363 Repeat 165 1778 17.40 37 36.50 Changed Cysteine rich repeat
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