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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
E1-E2_ATPase PF00122 Family 78 27959 221.20 22 24.90 Changed E1-E2 ATPase
E1-N PF14463 Family 2 1 151.00 100 33.19 Changed E1 N-terminal domain
E1_4HB PF16191 Domain 279 902 69.80 40 6.60 Changed Ubiquitin-activating enzyme E1 four-helix bundle
E1_DerP2_DerF2 PF02221 Domain 91 1379 126.40 19 70.79 Changed ML domain
E1_dh PF00676 Family 14 6856 296.40 25 48.92 Changed Dehydrogenase E1 component
E1_FCCH PF16190 Domain 176 904 71.30 46 6.68 Changed Ubiquitin-activating enzyme E1 FCCH domain
E1_UFD PF09358 Domain 182 900 91.00 37 8.92 Changed Ubiquitin fold domain
E2 PF08199 Family 1 1 37.00 100 100.00 Changed Bacteriophage E2-like protein
E2F_CC-MB PF16421 Domain 167 911 97.30 38 25.02 Changed E2F transcription factor CC-MB domain
E2F_TDP PF02319 Domain 206 2271 71.40 40 19.69 Changed E2F/DP family winged-helix DNA-binding domain
E2R135 PF11570 Coiled-coil 1 3 98.70 24 38.24 Changed Coiled-coil receptor-binding R-domain of colicin E2
E2_bind PF08825 Domain 147 512 83.90 36 18.97 Changed E2 binding domain
E3_binding PF02817 Family 1005 5665 35.70 40 7.83 Changed e3 binding domain
E3_UbLigase_EDD PF11547 Family 10 136 51.70 83 2.01 Changed E3 ubiquitin ligase EDD
E3_UbLigase_R4 PF13764 Family 32 324 582.10 34 19.62 Changed E3 ubiquitin-protein ligase UBR4
E6 PF00518 Family 12 35 109.30 28 70.09 Changed Early Protein (E6)
E7 PF00527 Family 9 29 86.60 27 86.68 Changed E7 protein, Early protein
EABR PF12180 Domain 12 132 33.80 51 8.08 Changed TSG101 and ALIX binding domain of CEP55
Ead_Ea22 PF13935 Family 31 15 129.10 21 70.13 Changed Ead/Ea22-like protein
EAF PF09816 Domain 107 564 103.00 28 29.38 Changed RNA polymerase II transcription elongation factor
Eaf7 PF07904 Family 61 458 103.90 27 37.05 Changed Chromatin modification-related protein EAF7
EAGR_box PF16713 Domain 22 25 33.90 44 10.56 Changed Enriched in aromatic and glycine Residues box
EAL PF00563 Domain 73 13507 228.20 29 33.61 Changed EAL domain
EamA PF00892 Family 97 41454 135.50 15 75.74 Changed EamA-like transporter family
EAP30 PF04157 Family 239 1163 216.30 26 59.28 Changed EAP30/Vps36 family
Eapp_C PF10238 Family 66 267 123.90 36 52.93 Changed E2F-associated phosphoprotein
EAR PF07897 Family 30 214 38.00 51 10.92 Changed Ethylene-responsive binding factor-associated repression
EAV_GP5 PF15981 Family 1 1 80.00 100 31.37 Changed Envelope glycoprotein GP 5 of equine arteritis virus
EAV_GS PF01309 Family 1 1 196.00 100 86.34 Changed Equine arteritis virus small envelope glycoprotein
EB PF01683 Family 226 1927 56.30 25 23.29 Changed EB module
EB1 PF03271 Family 168 951 41.60 52 13.80 Changed EB1-like C-terminal motif
EB1_binding PF05937 Family 6 64 167.10 79 6.22 Changed EB-1 Binding Domain
EBA-175_VI PF11556 Family 11 43 80.00 49 6.92 Changed Erythrocyte binding antigen 175
Ebola_NP PF05505 Family 2 4 561.00 38 90.81 Changed Ebola nucleoprotein
EBP PF05241 Family 177 806 174.10 28 68.01 Changed Emopamil binding protein
Ebp2 PF05890 Family 137 645 247.10 31 74.49 Changed Eukaryotic rRNA processing protein EBP2
EBP50_C PF09007 Domain 35 220 94.60 37 35.90 Changed EBP50, C-terminal
EBV-NA1 PF02905 Domain 2 2 146.00 89 22.78 Changed Epstein Barr virus nuclear antigen-1, DNA-binding domain
EBV-NA3 PF05009 Family 3 6 257.70 38 26.59 Changed Epstein-Barr virus nuclear antigen 3 (EBNA-3)
EB_dh PF09459 Domain 26 220 236.20 20 66.75 Changed Ethylbenzene dehydrogenase
EccE PF11203 Family 55 210 102.40 27 22.99 Changed Putative type VII ESX secretion system translocon, EccE
ECF-ribofla_trS PF07155 Family 48 1002 161.60 20 79.06 Changed ECF-type riboflavin transporter, S component
ECF_trnsprt PF12822 Family 59 1657 169.60 18 80.95 Changed ECF transporter, substrate-specific component
ECH_1 PF00378 Domain 9 19370 231.90 24 67.82 Changed Enoyl-CoA hydratase/isomerase
ECH_2 PF16113 Domain 295 2169 291.90 32 77.13 Changed Enoyl-CoA hydratase/isomerase
EcKinase PF02958 Family 51 1767 244.20 19 62.81 Changed Ecdysteroid kinase
Ecl1 PF12855 Family 22 298 41.20 38 19.52 Changed Life-span regulatory factor
Eclosion PF04736 Family 10 51 59.80 52 65.71 Changed Eclosion hormone
ECM1 PF05782 Family 12 85 336.30 40 91.59 Changed Extracellular matrix protein 1 (ECM1)
ECM11 PF15463 Family 68 183 133.90 29 27.32 Changed Extracellular mutant protein 11
Ecm29 PF13001 Family 123 597 407.10 25 27.63 Changed Proteasome stabiliser
Ecm33 PF12454 Family 17 104 40.10 44 10.01 Changed GPI-anchored cell wall organization protein
Eco57I PF07669 Domain 17 644 110.30 23 12.27 Changed Eco57I restriction-modification methylase
EcoEI_R_C PF08463 Family 230 653 156.30 18 17.85 Changed EcoEI R protein C-terminal
EcoR124_C PF12008 Domain 179 432 263.50 20 29.06 Changed Type I restriction and modification enzyme - subunit R C terminal
EcoRI PF02963 Domain 8 19 218.10 52 87.98 Changed Restriction endonuclease EcoRI
EcoRII-C PF09019 Domain 9 52 160.10 40 43.55 Changed EcoRII C terminal
EcoRII-N PF09217 Domain 7 29 130.90 32 34.69 Changed Restriction endonuclease EcoRII, N-terminal
EcoRI_methylase PF13651 Family 23 145 260.90 38 88.06 Changed Adenine-specific methyltransferase EcoRI
Ecotin PF03974 Family 55 155 123.00 37 70.92 Changed Ecotin
ECR1_N PF14382 Domain 250 955 38.50 35 14.20 Changed Exosome complex exonuclease RRP4 N-terminal region
EcsB PF05975 Family 66 298 332.10 21 95.02 Changed Bacterial ABC transporter protein EcsB
EcsC PF12787 Family 86 539 229.40 18 83.78 Changed EcsC protein family
ECSCR PF15820 Family 2 46 96.70 71 40.31 Changed Endothelial cell-specific chemotaxis regulator
ECSIT PF06239 Family 19 150 202.50 40 52.05 Changed Evolutionarily conserved signalling intermediate in Toll pathway
ECSIT_C PF14784 Domain 42 135 120.10 37 31.37 Changed C-terminal domain of the ECSIT protein
Ectatomin PF06457 Domain 2 0 0.00 0 0.00 Changed Ectatomin
ecTbetaR2 PF08917 Domain 20 98 107.80 51 20.17 Changed Transforming growth factor beta receptor 2 ectodomain
Ectoine_synth PF06339 Family 34 347 125.00 48 94.42 Changed Ectoine synthase
Edc3_linker PF16598 Family 7 74 90.80 69 18.42 Changed Linker region of enhancer of mRNA-decapping protein 3
EDR1 PF14381 Family 77 943 189.00 31 23.79 Changed Ethylene-responsive protein kinase Le-CTR1
EELM2 PF15863 Domain 8 59 156.70 46 30.98 Changed Extended EGL-27 and MTA1 homology domain
EF-1_beta_acid PF10587 Domain 77 662 27.40 62 9.63 Changed Eukaryotic elongation factor 1 beta central acidic region
EF-G-binding_N PF07299 Domain 31 95 82.80 29 38.74 Changed Elongation factor G-binding protein, N-terminal
EF-hand_1 PF00036 Domain 571 4693 28.70 30 9.67 Changed EF hand
EF-hand_10 PF14788 Domain 9 102 49.60 51 6.79 Changed EF hand
EF-hand_11 PF08976 Domain 2 212 89.40 32 17.53 Changed EF-hand domain
EF-hand_2 PF09068 Domain 67 801 119.00 40 9.29 Changed EF hand
EF-hand_3 PF09069 Domain 23 773 90.90 46 6.90 Changed EF-hand
EF-hand_4 PF12763 Family 13 3932 95.10 30 16.54 Changed Cytoskeletal-regulatory complex EF hand
EF-hand_5 PF13202 Domain 106 10680 23.60 29 7.52 Changed EF hand
EF-hand_6 PF13405 Domain 602 2991 31.90 32 10.68 Changed EF-hand domain
EF-hand_7 PF13499 Domain 97 30100 68.70 26 21.55 Changed EF-hand domain pair
EF-hand_8 PF13833 Domain 38 9176 49.40 22 12.14 Changed EF-hand domain pair
EF-hand_9 PF14658 Domain 7 104 65.50 37 14.38 Changed EF-hand domain
EF-hand_like PF09279 Domain 26 1457 85.40 28 8.28 Changed Phosphoinositide-specific phospholipase C, efhand-like
EF1G PF00647 Domain 108 806 103.70 49 25.82 Changed Elongation factor 1 gamma, conserved domain
EF1_GNE PF00736 Domain 188 1198 84.80 49 34.60 Changed EF-1 guanine nucleotide exchange domain
efb-c PF12199 Domain 2 2 65.00 43 47.45 Changed Extracellular fibrinogen binding protein C terminal
EFF-AFF PF14884 Family 4 105 405.10 29 86.96 Changed Type I membrane glycoproteins cell-cell fusogen
Effector_1 PF04518 Family 5 14 352.10 25 52.65 Changed Effector from type III secretion system
Efg1 PF10153 Family 131 400 113.30 35 37.36 Changed rRNA-processing protein Efg1
EFG_C PF00679 Domain 125 13878 87.60 27 12.71 Changed Elongation factor G C-terminus
EFG_II PF14492 Domain 85 7670 73.70 38 9.87 Changed Elongation Factor G, domain II
EFG_IV PF03764 Domain 67 7048 117.80 32 16.29 Changed Elongation factor G, domain IV
EFhand_Ca_insen PF08726 Domain 18 880 68.00 43 5.89 Changed Ca2+ insensitive EF hand
EFP PF01132 Domain 870 3075 53.70 31 28.14 Changed Elongation factor P (EF-P) OB domain
EFP_N PF08207 Domain 178 3251 57.40 33 30.29 Changed Elongation factor P (EF-P) KOW-like domain
efThoc1 PF11957 Family 49 620 412.50 26 68.40 Changed THO complex subunit 1 transcription elongation factor
EFTUD2 PF16004 Family 154 553 111.40 45 11.91 Changed 116 kDa U5 small nuclear ribonucleoprotein component N-terminus
EF_assoc_1 PF08355 Family 101 717 72.10 39 11.10 Changed EF hand associated
EF_assoc_2 PF08356 Family 80 755 86.30 44 13.62 Changed EF hand associated
EF_TS PF00889 Family 104 3345 187.60 30 67.87 Changed Elongation factor TS
EGF PF00008 Domain 67 31200 31.80 40 9.43 Changed EGF-like domain
EGF_2 PF07974 Domain 50 3064 30.60 40 4.11 Changed EGF-like domain
EGF_3 PF12947 Domain 136 2928 36.20 41 4.43 Changed EGF domain
EGF_alliinase PF04863 Domain 20 107 54.90 58 12.31 Changed Alliinase EGF-like domain
EGF_CA PF07645 Domain 18 31607 41.70 36 11.26 Changed Calcium-binding EGF domain
EGF_MSP1_1 PF12946 Domain 9 37 37.20 35 2.66 Changed MSP1 EGF domain 1
Egg_lysin PF01303 Domain 24 2 113.00 75 73.38 Changed Egg lysin (Sperm-lysin)
EGL-1 PF11430 Family 10 14 19.60 65 18.99 Changed Programmed cell death activator EGL-1
Ehbp PF10622 Family 11 13 80.70 54 90.04 Changed Energy-converting hydrogenase B subunit P (EhbP)
EHD_N PF16880 Family 86 755 32.60 50 5.84 Changed N-terminal EH-domain containing protein
EHN PF06441 Family 604 1619 108.50 35 26.21 Changed Epoxide hydrolase N terminus
Ehrlichia_rpt PF09528 Repeat 4 6 35.70 70 25.75 Changed Ehrlichia tandem repeat (Ehrlichia_rpt)
EH_Signature PF15611 Domain 26 73 362.30 14 74.72 Changed EH_Signature domain
EI24 PF07264 Family 319 1560 214.60 16 71.60 Changed Etoposide-induced protein 2.4 (EI24)
EIAV_GP90 PF00971 Family 3 0 0.00 0 0.00 Changed EIAV coat protein, gp90
EIAV_Rev PF11129 Family 2 0 0.00 0 0.00 Changed Rev protein of equine infectious anaemia virus
eIF-1a PF01176 Domain 424 4207 63.80 44 63.72 Changed Translation initiation factor 1A / IF-1
eIF-3c_N PF05470 Family 7 890 432.30 31 66.06 Changed Eukaryotic translation initiation factor 3 subunit 8 N-terminus
eIF-3_zeta PF05091 Family 103 699 447.30 40 89.20 Changed Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
eIF-4B PF06273 Family 9 295 263.40 26 80.71 Changed Plant specific eukaryotic initiation factor 4B
eIF-5a PF01287 Domain 51 1123 67.10 39 34.76 Changed Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
eIF-5_eIF-2B PF01873 Family 198 1579 116.40 38 34.84 Changed Domain found in IF2B/IF5
eIF-6 PF01912 Family 149 859 187.00 59 77.54 Changed eIF-6 family
eIF2A PF08662 Family 19 1856 176.40 22 29.52 Changed Eukaryotic translation initiation factor eIF2A
eIF2_C PF09173 Domain 113 838 89.40 54 18.82 Changed Initiation factor eIF2 gamma, C terminal
eIF3g PF12353 Family 111 666 118.40 35 39.56 Changed Eukaryotic translation initiation factor 3 subunit G
eIF3_N PF09440 Domain 115 587 128.10 36 30.10 Changed eIF3 subunit 6 N terminal domain
eIF3_p135 PF12807 Family 160 994 152.80 27 11.64 Changed Translation initiation factor eIF3 subunit 135
eIF3_subunit PF08597 Family 165 654 229.40 26 93.78 Changed Translation initiation factor eIF3 subunit
EIF4E-T PF10477 Family 9 233 457.30 23 63.33 Changed Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E
EIF_2_alpha PF07541 Family 191 811 114.50 39 36.14 Changed Eukaryotic translation initiation factor 2 alpha subunit
eIF_4EBP PF05456 Family 46 240 103.90 42 75.15 Changed Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)
eIF_4G1 PF12152 Domain 51 310 70.90 41 5.49 Changed Eukaryotic translation initiation factor 4G1
EII-GUT PF03608 Family 49 172 166.20 52 87.97 Changed PTS system enzyme II sorbitol-specific factor
EII-Sor PF03609 Family 298 1071 231.70 29 86.10 Changed PTS system sorbose-specific iic component
EIIA-man PF03610 Family 27 2217 114.10 21 39.48 Changed PTS system fructose IIA component
EIIBC-GUT_C PF07663 Family 25 166 92.30 69 28.02 Changed Sorbitol phosphotransferase enzyme II C-terminus
EIIBC-GUT_N PF03612 Family 64 176 174.20 45 53.39 Changed Sorbitol phosphotransferase enzyme II N-terminus
EIIC-GAT PF03611 Family 144 955 382.20 24 86.47 Changed PTS system sugar-specific permease component
EIID-AGA PF03613 Family 297 1096 262.50 34 92.70 Changed PTS system mannose/fructose/sorbose family IID component
EIN3 PF04873 Family 10 385 219.10 55 43.81 Changed Ethylene insensitive 3
Eisosome1 PF12757 Family 90 233 123.40 30 14.47 Changed Eisosome protein 1
EKLF_TAD1 PF16832 Domain 2 31 26.40 81 7.59 Changed Erythroid krueppel-like transcription factor, transactivation 1
EKLF_TAD2 PF16833 Domain 12 33 26.90 65 7.71 Changed Erythroid krueppel-like transcription factor, transactivation 2
EKR PF10371 Domain 147 968 55.50 40 4.73 Changed Domain of unknown function
ELF PF03317 Family 1 18 126.90 52 84.13 Changed ELF protein
Elf-1_N PF12310 Family 19 212 93.10 43 17.64 Changed Transcription factor protein N terminal
Elf1 PF05129 Domain 150 687 76.50 44 60.03 Changed Transcription elongation factor Elf1 like
ELFV_dehydrog PF00208 Domain 97 4908 214.00 26 46.79 Changed Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ELFV_dehydrog_N PF02812 Domain 425 4143 125.10 39 29.14 Changed Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELH PF02323 Family 4 3 106.00 5 59.33 Changed Egg-laying hormone precursor
Elicitin PF00964 Domain 69 375 87.40 22 42.60 Changed Elicitin
ELK PF03789 Domain 33 606 21.90 51 6.83 Changed ELK domain
ELL PF10390 Family 35 356 237.90 32 42.43 Changed RNA polymerase II elongation factor ELL
ELM2 PF01448 Family 217 1378 56.90 28 7.79 Changed ELM2 domain
ELMO_CED12 PF04727 Family 232 1674 163.10 25 33.41 Changed ELMO/CED-12 family
ELO PF01151 Family 150 3055 227.20 25 78.88 Changed GNS1/SUR4 family
EloA-BP1 PF15870 Family 28 327 117.90 28 15.12 Changed ElonginA binding-protein 1
Elong-fact-P_C PF09285 Domain 484 3113 55.90 47 29.42 Changed Elongation factor P, C-terminal
Elongin_A PF06881 Family 120 544 103.10 27 22.97 Changed RNA polymerase II transcription factor SIII (Elongin) subunit A
Elong_Iki1 PF10483 Family 90 431 244.10 21 77.39 Changed Elongator subunit Iki1
ELP6 PF09807 Family 17 343 201.50 21 81.81 Changed Elongation complex protein 6
ELYS PF13934 Family 114 434 220.50 24 23.89 Changed Nuclear pore complex assembly
ELYS-bb PF16687 Domain 5 120 387.60 41 22.75 Changed beta-propeller of ELYS nucleoporin
EMA PF02488 Family 2 12 241.80 37 90.69 Changed Merozoite Antigen
Emaravirus_P4 PF16505 Family 2 0 0.00 0 0.00 Changed P4 movement protein of Emaravirus, and the 30K superfamily
EMG1 PF03587 Family 137 781 193.90 45 76.21 Changed EMG1/NEP1 methyltransferase
EMI PF07546 Domain 126 632 68.40 33 10.67 Changed EMI domain
EMP24_GP25L PF01105 Domain 215 3784 177.20 21 75.95 Changed emp24/gp25L/p24 family/GOLD
EMP70 PF02990 Family 358 2619 452.40 35 82.05 Changed Endomembrane protein 70
EmrE PF13536 Family 54 136 259.80 44 83.61 Changed Putative multidrug resistance efflux transporter
Enamelin PF15362 Family 16 48 798.40 59 78.61 Changed Enamelin
End3 PF12761 Family 47 232 187.00 45 40.52 Changed Actin cytoskeleton-regulatory complex protein END3
EndIII_4Fe-2S PF10576 Domain 505 1787 17.00 50 6.63 Changed Iron-sulfur binding domain of endonuclease III
Endomucin PF07010 Family 11 46 178.80 50 90.13 Changed Endomucin
Endonuc-BglII PF09195 Domain 9 70 176.20 22 83.22 Changed Restriction endonuclease BglII
Endonuc-BsobI PF09194 Domain 9 19 268.20 53 97.77 Changed Restriction endonuclease BsobI
Endonuc-dimeris PF09124 Domain 2 7 45.00 30 40.33 Changed T4 recombination endonuclease VII, dimerisation
Endonuc-EcoRV PF09233 Domain 9 27 214.20 36 87.38 Changed Restriction endonuclease EcoRV
Endonuc-FokI_C PF09254 Domain 6 19 171.90 33 33.78 Changed Restriction endonuclease FokI, C terminal
Endonuc-HincII PF09226 Domain 3 9 238.60 43 93.39 Changed Restriction endonuclease HincII
Endonuc-MspI PF09208 Domain 5 8 255.10 36 62.86 Changed Restriction endonuclease MspI
Endonuc-PvuII PF09225 Domain 4 7 150.60 58 68.35 Changed Restriction endonuclease PvuII
Endonuclease_1 PF04231 Family 14 714 203.50 28 48.55 Changed Endonuclease I
Endonuclease_5 PF04493 Family 169 845 187.80 34 75.19 Changed Endonuclease V
Endonuclease_7 PF02945 Domain 16 180 78.80 26 18.48 Changed Recombination endonuclease VII
Endonuclease_NS PF01223 Domain 56 2050 219.10 21 52.55 Changed DNA/RNA non-specific endonuclease
Endonuclea_NS_2 PF13930 Domain 20 445 129.90 25 29.34 Changed DNA/RNA non-specific endonuclease
Endonuc_BglI PF14562 Domain 1 3 284.70 41 97.16 Changed Restriction endonuclease BglI
Endonuc_Holl PF10107 Family 10 58 124.70 35 78.04 Changed Endonuclease related to archaeal Holliday junction resolvase
Endonuc_subdom PF09062 Domain 2 3 78.70 56 4.21 Changed PI-PfuI Endonuclease subdomain
Endopep_inhib PF16800 Domain 13 35 143.10 19 52.63 Changed IseA DL-endopeptidase inhibitor
Endostatin PF06482 Domain 40 365 238.50 38 26.49 Changed Collagenase NC10 and Endostatin
Endosulfine PF04667 Family 32 856 80.70 33 55.38 Changed cAMP-regulated phosphoprotein/endosulfine conserved region
Endothelin PF00322 Repeat 6 185 28.90 79 15.48 Changed Endothelin family
Endotoxin_C PF03944 Domain 80 7 117.60 14 16.02 Changed delta endotoxin
Endotoxin_M PF00555 Domain 36 1 210.00 100 31.48 Changed delta endotoxin
Endotoxin_mid PF09131 Domain 3 1 124.00 100 89.86 Changed Bacillus thuringiensis delta-Endotoxin, middle domain
Endotoxin_N PF03945 Domain 5 111 195.10 16 32.80 Changed delta endotoxin, N-terminal domain
EndoU_bacteria PF14436 Family 55 153 124.00 16 19.24 Changed Bacterial EndoU nuclease
End_beta_barrel PF12195 Domain 3 1 77.00 100 16.89 Changed Beta barrel domain of bacteriophage endosialidase
End_beta_propel PF12217 Domain 3 0 0.00 0 0.00 Changed Catalytic beta propeller domain of bacteriophage endosialidase
End_N_terminal PF12218 Domain 4 0 0.00 0 0.00 Changed N terminal extension of bacteriophage endosialidase
End_tail_spike PF12219 Domain 5 0 0.00 0 0.00 Changed Catalytic domain of bacteriophage endosialidase
Engrail_1_C_sig PF10525 Domain 20 218 30.60 65 10.24 Changed Engrailed homeobox C-terminal signature domain
Enkurin PF13864 Family 138 436 97.30 26 32.27 Changed Calmodulin-binding
Eno-Rase_FAD_bd PF07055 Family 129 339 63.80 46 16.20 Changed Enoyl reductase FAD binding domain
Eno-Rase_NADH_b PF12242 Family 132 334 79.00 58 19.96 Changed NAD(P)H binding domain of trans-2-enoyl-CoA reductase
ENOD40 PF08247 Family 4 1 12.00 100 100.00 Changed ENOD40 protein
ENOD93 PF03386 Family 12 229 74.20 57 65.47 Changed Early nodulin 93 ENOD93 protein
Enolase_C PF00113 Domain 9 4380 273.00 48 65.58 Changed Enolase, C-terminal TIM barrel domain
Enolase_N PF03952 Domain 791 4184 127.40 56 29.98 Changed Enolase, N-terminal domain
Enoyl_reductase PF12241 Family 100 341 233.60 53 59.33 Changed Trans-2-enoyl-CoA reductase catalytic region
ENT PF03735 Family 56 722 65.90 42 13.08 Changed ENT domain
EntA_Immun PF08951 Family 65 184 71.10 17 55.72 Changed Enterocin A Immunity
Entericidin PF08085 Family 102 381 20.70 47 43.84 Changed Entericidin EcnA/B family
Enterotoxin_a PF01375 Domain 6 171 189.00 20 33.64 Changed Heat-labile enterotoxin alpha chain
Enterotoxin_b PF01376 Domain 1 1 102.00 100 82.26 Changed Heat-labile enterotoxin beta chain
Enterotoxin_HS1 PF08090 Family 2 0 0.00 0 0.00 Changed Heat stable E.coli enterotoxin 1
Enterotoxin_ST PF02048 Family 6 2 51.50 29 65.19 Changed Heat-stable enterotoxin ST
ENTH PF01417 Domain 63 1942 119.90 38 22.17 Changed ENTH domain
Env-gp36 PF09590 Family 5 0 0.00 0 0.00 Changed Lentivirus surface glycoprotein
EnY2 PF10163 Family 109 427 78.80 36 58.35 Changed Transcription factor e(y)2
EOS1 PF12326 Family 31 227 118.20 28 33.63 Changed N-glycosylation protein
EP400_N PF15790 Family 5 118 402.20 62 20.25 Changed E1A-binding protein p400, N-terminal
Ependymin PF00811 Family 50 206 123.00 27 53.09 Changed Ependymin
EPF PF17181 Family 51 642 59.90 40 48.62 Changed Epidermal patterning factor proteins
EphA2_TM PF14575 Domain 185 1204 79.00 36 8.59 Changed Ephrin type-A receptor 2 transmembrane domain
Ephrin PF00812 Domain 44 739 125.10 35 46.21 Changed Ephrin
Ephrin_lbd PF01404 Domain 68 1269 167.40 52 19.12 Changed Ephrin receptor ligand binding domain
Ephrin_rec_like PF07699 Family 29 3539 46.90 30 7.49 Changed Putative ephrin-receptor like
Epiglycanin_C PF14654 Domain 6 33 92.20 57 14.14 Changed Mucin, catalytic, TM and cytoplasmic tail region
Epiglycanin_TR PF05647 Repeat 15 233 59.10 47 99.99 Changed Tandem-repeating region of mucin, epiglycanin-like
Epimerase PF01370 Family 96 23811 223.40 19 66.16 Changed NAD dependent epimerase/dehydratase family
Epimerase_2 PF02350 Family 96 2277 330.10 30 86.66 Changed UDP-N-acetylglucosamine 2-epimerase
EPL1 PF10513 Family 119 1569 167.50 21 17.95 Changed Enhancer of polycomb-like
EpmC PF04315 Family 44 191 156.30 50 84.82 Changed Elongation factor P hydroxylase
EpoR_lig-bind PF09067 Domain 12 424 98.20 29 18.71 Changed Erythropoietin receptor, ligand binding
EPO_TPO PF00758 Domain 13 118 149.60 39 56.91 Changed Erythropoietin/thrombopoietin
EppA_BapA PF07268 Family 2 2 137.00 61 79.88 Changed Exported protein precursor (EppA/BapA)
EpsG PF14897 Family 66 443 322.10 15 88.59 Changed EpsG family
Epsilon_antitox PF08998 Domain 2 11 84.20 42 78.47 Changed Bacterial epsilon antitoxin
EPSP_synthase PF00275 Family 20 6356 386.70 25 81.55 Changed EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
EPTP PF03736 Repeat 227 2078 44.40 24 17.12 Changed EPTP domain
EpuA PF11772 Family 37 141 45.60 35 53.78 Changed DNA-directed RNA polymerase subunit beta
EPV_E5 PF08135 Family 1 1 43.00 100 100.00 Changed Major transforming protein E5 family
Equine_IAV_S2 PF06502 Family 2 0 0.00 0 0.00 Changed Equine infectious anaemia virus S2 protein
ER PF01133 Family 53 376 92.60 48 62.54 Changed Enhancer of rudimentary
ER-remodelling PF14755 Domain 5 2 116.50 21 7.11 Changed Intracellular membrane remodeller
ERAP1_C PF11838 Domain 803 3543 294.10 18 35.44 Changed ERAP1-like C-terminal domain
ERbeta_N PF12497 Family 18 93 109.30 52 20.57 Changed Estrogen receptor beta
ERCC3_RAD25_C PF16203 Domain 40 1194 213.80 42 31.94 Changed ERCC3/RAD25/XPB C-terminal helicase
ERCC4 PF02732 Domain 155 1899 146.90 21 20.20 Changed ERCC4 domain
ERF PF04404 Family 29 178 150.90 19 62.09 Changed ERF superfamily
eRF1_1 PF03463 Domain 278 1647 124.20 34 30.37 Changed eRF1 domain 1
eRF1_2 PF03464 Domain 21 1617 130.50 32 31.73 Changed eRF1 domain 2
eRF1_3 PF03465 Domain 34 1708 117.40 35 29.08 Changed eRF1 domain 3
Erf4 PF10256 Domain 126 691 114.40 29 42.54 Changed Golgin subfamily A member 7/ERF4 family
Erg28 PF03694 Family 132 471 113.70 32 73.97 Changed Erg28 like protein
ERG2_Sigma1R PF04622 Family 110 465 193.70 35 80.73 Changed ERG2 and Sigma1 receptor like protein
ERG4_ERG24 PF01222 Family 5 1568 377.50 30 85.87 Changed Ergosterol biosynthesis ERG4/ERG24 family
ERGIC_N PF13850 Domain 329 1576 89.20 31 22.19 Changed Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
ERK-JNK_inhib PF15002 Family 18 138 179.90 35 68.71 Changed ERK and JNK pathways, inhibitor
ERM PF00769 Family 71 578 230.80 33 41.63 Changed Ezrin/radixin/moesin family
ErmC PF06308 Family 1 1 31.00 100 100.00 Changed 23S rRNA methylase leader peptide (ErmC)
ERO1 PF04137 Family 172 811 341.10 36 72.40 Changed Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
ERp29 PF07749 Domain 164 529 91.80 30 25.85 Changed Endoplasmic reticulum protein ERp29, C-terminal domain
ERp29_N PF07912 Domain 3 103 118.80 48 45.32 Changed ERp29, N-terminal domain
Erp_C PF06780 Family 4 6 137.00 43 39.09 Changed Erp protein C-terminus
Erv26 PF04148 Family 76 416 187.50 37 86.56 Changed Transmembrane adaptor Erv26
Erythro-docking PF09277 Domain 2 11 52.90 44 3.02 Changed Erythronolide synthase, docking
Erythrovirus_X PF06795 Family 1 1 81.00 100 100.00 Changed Erythrovirus X protein
Erythro_esteras PF05139 Family 178 645 325.60 23 72.87 Changed Erythromycin esterase
Eryth_link_C PF16915 Domain 13 0 0.00 0 0.00 Changed Annelid erythrocruorin linker subunit C-terminus
Ery_res_leader1 PF08051 Family 3 7 15.00 72 6.25 Changed Erythromycin resistance leader peptide
Ery_res_leader2 PF08057 Family 1 0 0.00 0 0.00 Changed Erythromycin resistance leader peptide
ER_lumen_recept PF00810 Family 252 1425 138.70 42 56.95 Changed ER lumen protein retaining receptor
Es2 PF09751 Family 63 624 319.10 26 73.35 Changed Nuclear protein Es2
ESAG1 PF03238 Family 11 13 228.80 56 70.05 Changed ESAG protein
ESCRT-II PF05871 Family 153 569 135.80 34 55.79 Changed ESCRT-II complex subunit
ESM4 PF15952 Family 14 74 156.30 29 99.36 Changed Enhancer of split M4 family
ESP PF16590 Family 13 26 80.70 35 74.07 Changed Exocrine gland-secreting peptide
EspA PF03433 Family 7 24 168.10 28 90.19 Changed EspA-like secreted protein
EspB PF05802 Family 3 6 192.30 19 90.37 Changed Enterobacterial EspB protein
EspF PF04806 Repeat 3 1 34.00 100 3.61 Changed EspF protein repeat
EspG PF06872 Family 4 2 390.00 20 97.74 Changed EspG protein
ESPR PF13018 Domain 154 452 23.80 42 1.14 Changed Extended Signal Peptide of Type V secretion system
ESR1_C PF12743 Domain 19 63 43.80 60 8.73 Changed Oestrogen-type nuclear receptor final C-terminal
EssA PF10661 Family 4 19 135.60 18 78.59 Changed WXG100 protein secretion system (Wss), protein EssA
ESSS PF10183 Family 17 341 108.80 25 74.11 Changed ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)
EST1 PF10374 Domain 131 817 119.90 24 12.48 Changed Telomerase activating protein Est1
EST1_DNA_bind PF10373 Domain 55 1250 250.40 18 28.85 Changed Est1 DNA/RNA binding domain
Esterase PF00756 Domain 20 5369 234.60 16 70.20 Changed Putative esterase
Esterase_phd PF10503 Family 2 1300 183.50 22 50.11 Changed Esterase PHB depolymerase
ESX-1_EspG PF14011 Family 135 313 237.20 20 90.79 Changed EspG family
ET PF01684 Family 55 189 78.80 33 73.76 Changed ET module
ETAA1 PF15350 Family 18 77 573.90 35 90.09 Changed Ewing's tumour-associated antigen 1 homologue
ETC_C1_NDUFA4 PF04800 Family 165 811 95.00 40 56.85 Changed ETC complex I subunit conserved region
ETC_C1_NDUFA5 PF04716 Family 129 517 68.90 39 35.61 Changed ETC complex I subunit conserved region
ETF PF01012 Domain 129 5938 178.80 23 60.44 Changed Electron transfer flavoprotein domain
ETF_alpha PF00766 Domain 521 3043 83.50 55 24.71 Changed Electron transfer flavoprotein FAD-binding domain
ETF_QO PF05187 Family 44 1353 99.20 49 19.62 Changed Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
EthD PF07110 Domain 56 1030 90.10 17 54.52 Changed EthD domain
Etmic-2 PF06670 Family 2 12 179.40 31 99.40 Changed Microneme protein Etmic-2
ETRAMP PF09716 Family 42 142 88.20 24 50.03 Changed Malarial early transcribed membrane protein (ETRAMP)
Ets PF00178 Domain 163 2668 79.80 50 19.68 Changed Ets-domain
ETS_PEA3_N PF04621 Family 36 266 279.70 49 68.77 Changed PEA3 subfamily ETS-domain transcription factor N terminal domain
ETX_MTX2 PF03318 Family 15 159 186.70 15 60.41 Changed Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
Euplotes_phero PF05842 Family 6 0 0.00 0 0.00 Changed Euplotes octocarinatus mating pheromone protein
EURL PF06937 Family 4 71 259.70 63 92.34 Changed EURL protein
EutA PF06277 Family 15 136 443.10 38 98.21 Changed Ethanolamine utilisation protein EutA
EutB PF06751 Family 115 436 427.80 58 92.49 Changed Ethanolamine ammonia lyase large subunit (EutB)
EutC PF05985 Family 179 433 230.10 41 80.74 Changed Ethanolamine ammonia-lyase light chain (EutC)
EutH PF04346 Family 59 170 349.80 40 93.31 Changed Ethanolamine utilisation protein, EutH
EutK_C PF16365 Domain 2 14 55.00 70 32.16 Changed Ethanolamine utilization protein EutK C-terminus
EutN_CcmL PF03319 Domain 194 472 82.00 40 88.55 Changed Ethanolamine utilisation protein EutN/carboxysome
EutQ PF06249 Domain 4 300 114.80 27 73.77 Changed Ethanolamine utilisation protein EutQ
EVC2_like PF12297 Family 16 77 371.00 47 34.27 Changed Ellis van Creveld protein 2 like protein
EVE PF01878 Domain 136 1307 140.00 32 69.09 Changed EVE domain
EVI2A PF05399 Family 11 49 194.00 53 91.17 Changed Ectropic viral integration site 2A protein (EVI2A)
Evr1_Alr PF04777 Family 347 1415 95.00 31 27.78 Changed Erv1 / Alr family
ExbD PF02472 Family 45 4154 133.60 22 88.61 Changed Biopolymer transport protein ExbD/TolR
Exc PF07825 Domain 2 25 75.60 28 92.24 Changed Excisionase-like protein
Excalibur PF05901 Domain 159 521 37.70 36 17.97 Changed Excalibur calcium-binding domain
Exo5 PF09810 Family 70 661 213.50 20 65.28 Changed Exonuclease V - a 5' deoxyribonuclease
Exo70 PF03081 Family 297 2095 321.80 23 57.34 Changed Exo70 exocyst complex subunit
Exo84_C PF16528 Domain 31 655 201.00 27 28.14 Changed Exocyst component 84 C-terminal
ExoD PF06055 Family 159 345 179.80 26 86.06 Changed Exopolysaccharide synthesis, ExoD
Exonuc_VIII PF06630 Family 2 15 160.60 33 22.34 Changed Enterobacterial exodeoxyribonuclease VIII
Exonuc_VII_L PF02601 Family 558 3003 221.20 25 69.27 Changed Exonuclease VII, large subunit
Exonuc_VII_S PF02609 Family 875 2206 51.80 33 63.98 Changed Exonuclease VII small subunit
Exonuc_V_gamma PF04257 Family 60 696 618.50 24 58.35 Changed Exodeoxyribonuclease V, gamma subunit
Exonuc_X-T_C PF08411 Family 136 358 256.40 34 54.67 Changed Exonuclease C-terminal
EXOSC1 PF10447 Domain 12 596 56.50 40 28.44 Changed Exosome component EXOSC1/CSL4
Exosortase_EpsH PF09721 Family 192 572 235.10 17 68.52 Changed Transmembrane exosortase (Exosortase_EpsH)
Exostosin PF03016 Family 32 3562 267.80 21 54.59 Changed Exostosin family
Exotox-A_bind PF09101 Domain 2 2 172.00 15 23.82 Changed Exotoxin A binding
Exotox-A_cataly PF09009 Domain 1 1 226.00 100 35.42 Changed Exotoxin A catalytic
Exotox-A_target PF09102 Domain 1 1 133.00 100 20.85 Changed Exotoxin A, targeting
Exo_endo_phos PF03372 Domain 322 14852 276.90 12 58.89 Changed Endonuclease/Exonuclease/phosphatase family
Exo_endo_phos_2 PF14529 Domain 81 2976 114.20 18 17.16 Changed Endonuclease-reverse transcriptase
EXS PF03124 Family 341 1663 299.40 28 49.44 Changed EXS family
ExsD PF16806 Domain 4 11 247.80 32 81.86 Changed Antiactivator protein ExsD
Extensin-like_C PF06904 Family 90 340 167.50 32 60.58 Changed Extensin-like protein C-terminus
Extensin_1 PF02095 Repeat 13 374 9.40 73 75.25 Changed Extensin-like protein repeat
Extensin_2 PF04554 Family 14 981 49.70 71 64.22 Changed Extensin-like region
EZH2_WD-Binding PF11616 Family 12 163 29.90 66 4.56 Changed WD repeat binding protein EZH2
EzrA PF06160 Family 91 259 527.70 23 95.41 Changed Septation ring formation regulator, EzrA
E_Pc_C PF06752 Family 18 153 214.70 51 29.25 Changed Enhancer of Polycomb C-terminus
E_raikovi_mat PF06360 Family 6 0 0.00 0 0.00 Changed Euplotes raikovi mating pheromone
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