Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.

Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
F-112 PF09645 Domain 1 2 89.50 30 98.35 Changed F-112 protein
F-actin_cap_A PF01267 Family 158 768 245.60 35 84.46 Changed F-actin capping protein alpha subunit
F-box PF00646 Domain 437 22864 44.90 22 10.31 Changed F-box domain
F-box-like PF12937 Domain 320 17931 48.10 24 9.22 Changed F-box-like
F-box-like_2 PF13013 Family 6 37 101.80 18 26.46 Changed F-box-like domain
F-box_4 PF15966 Domain 38 214 108.40 49 16.53 Changed F-box
F-protein PF00469 Family 20 2 219.00 41 94.60 Changed Negative factor, (F-Protein) or Nef
F1F0-ATPsyn_F PF10791 Family 57 268 87.70 52 52.40 Changed Mitochondrial F1-F0 ATP synthase subunit F of fungi
F420_ligase PF01996 Family 159 869 187.40 25 71.09 Changed F420-0:Gamma-glutamyl ligase
F420_oxidored PF03807 Family 48 5093 93.40 23 33.56 Changed NADP oxidoreductase coenzyme F420-dependent
F5_F8_type_C PF00754 Domain 184 8246 126.40 17 18.32 Changed F5/8 type C domain
FA PF08736 Family 82 1416 43.30 41 5.06 Changed FERM adjacent (FA)
FAA_hydrolase PF01557 Family 53 7723 214.90 26 71.72 Changed Fumarylacetoacetate (FAA) hydrolase family
FAA_hydrolase_N PF09298 Domain 290 1046 100.60 34 23.63 Changed Fumarylacetoacetase N-terminal
FabA PF07977 Domain 31 3198 124.30 33 55.62 Changed FabA-like domain
FACT-Spt16_Nlob PF14826 Domain 166 624 156.70 30 15.89 Changed FACT complex subunit SPT16 N-terminal lobe domain
FAD-oxidase_C PF02913 Domain 51 6646 228.30 22 39.69 Changed FAD linked oxidases, C-terminal domain
FAD-SLDH PF12318 Family 40 98 151.70 27 84.55 Changed Membrane bound FAD containing D-sorbitol dehydrogenase
FadA PF09403 Family 7 21 119.50 23 90.00 Changed Adhesion protein FadA
FadR_C PF07840 Family 24 161 168.90 43 69.17 Changed FadR C-terminal domain
FAD_binding_1 PF00667 Domain 11 3687 204.40 24 26.16 Changed FAD binding domain
FAD_binding_2 PF00890 Family 62 9863 367.70 25 67.07 Changed FAD binding domain
FAD_binding_3 PF01494 Family 20 20111 274.60 17 62.85 Changed FAD binding domain
FAD_binding_4 PF01565 Domain 128 19552 135.20 21 26.04 Changed FAD binding domain
FAD_binding_5 PF00941 Family 74 3625 177.30 25 28.20 Changed FAD binding domain in molybdopterin dehydrogenase
FAD_binding_6 PF00970 Domain 40 8431 97.30 22 25.09 Changed Oxidoreductase FAD-binding domain
FAD_binding_7 PF03441 Domain 539 2904 189.50 34 36.58 Changed FAD binding domain of DNA photolyase
FAD_binding_8 PF08022 Domain 17 4852 106.70 23 15.55 Changed FAD-binding domain
FAD_binding_9 PF08021 Domain 29 1219 103.40 31 36.85 Changed Siderophore-interacting FAD-binding domain
FAD_oxidored PF12831 Family 112 2014 277.30 20 55.99 Changed FAD dependent oxidoreductase
FAD_syn PF06574 Family 53 2380 151.00 30 48.97 Changed FAD synthetase
Fae PF08714 Family 77 233 159.20 43 71.68 Changed Formaldehyde-activating enzyme (Fae)
FAE1_CUT1_RppA PF08392 Family 27 1566 247.60 43 57.99 Changed FAE1/Type III polyketide synthase-like protein
FaeA PF04703 Domain 5 61 57.20 20 26.92 Changed FaeA-like protein
FAF PF11250 Family 76 480 53.30 38 18.24 Changed Fantastic Four meristem regulator
FAIM1 PF06905 Family 43 211 152.90 40 73.01 Changed Fas apoptotic inhibitory molecule (FAIM1)
FAINT PF04385 Family 64 1784 75.90 14 23.28 Changed Domain of unknown function, DUF529
FAM101 PF15068 Family 27 133 167.00 49 91.67 Changed FAM101 family
FAM104 PF15434 Family 15 78 115.70 62 78.03 Changed Family 104
FAM110_C PF14160 Family 46 255 108.70 41 28.74 Changed Centrosome-associated C terminus
FAM110_N PF14161 Family 11 207 99.40 39 29.22 Changed Centrosome-associated N terminus
FAM117 PF15388 Family 30 266 259.20 45 71.00 Changed Protein Family FAM117
FAM124 PF15067 Family 33 148 223.80 53 52.84 Changed FAM124 family
FAM131 PF15010 Family 15 218 229.50 43 76.92 Changed Putative cell signalling
FAM150 PF15129 Family 15 93 99.30 61 61.06 Changed FAM150 family
FAM153 PF15722 Family 9 45 79.80 49 71.88 Changed FAM153 family
FAM163 PF15069 Family 29 132 152.00 50 98.62 Changed FAM163 family
FAM165 PF14981 Family 4 41 49.70 73 82.64 Changed FAM165 family
FAM167 PF11652 Family 21 129 81.70 62 43.71 Changed FAM167
FAM176 PF14851 Family 33 228 134.60 41 49.92 Changed FAM176 family
FAM177 PF14774 Family 27 186 104.40 35 51.84 Changed FAM177 family
FAM178 PF14816 Family 21 139 305.30 35 40.37 Changed Family of unknown function, FAM178
FAM180 PF15173 Family 17 100 134.40 46 75.43 Changed FAM180 family
FAM181 PF15238 Family 7 112 192.70 37 62.60 Changed FAM181
FAM183 PF14886 Family 50 163 106.00 30 56.82 Changed FAM183A and FAM183B related
FAM184 PF15665 Family 16 206 194.30 34 19.33 Changed Family with sequence similarity 184, A and B
FAM193_C PF15914 Family 5 160 54.00 71 5.40 Changed FAM193 family C-terminal
FAM194 PF14977 Family 36 180 185.90 27 27.50 Changed FAM194 protein
FAM195 PF14799 Family 41 207 92.60 37 62.48 Changed FAM195 family
FAM196 PF15265 Family 23 147 394.60 38 95.75 Changed FAM196 family
FAM198 PF15051 Family 8 134 280.70 51 61.86 Changed FAM198 protein
FAM199X PF15814 Family 4 71 284.40 80 84.96 Changed Protein family FAM199X
FAM209 PF15206 Family 22 57 145.70 57 83.51 Changed FAM209 family
Fam20C PF06702 Family 57 379 198.30 49 45.02 Changed Golgi casein kinase, C-terminal, Fam20
FAM212 PF15342 Family 10 127 57.90 62 19.77 Changed FAM212 family
FAM216B PF15107 Family 13 69 106.20 46 55.38 Changed FAM216B protein family
FAM217 PF15344 Family 33 96 215.30 38 47.90 Changed FAM217 family
FAM219A PF15260 Family 14 160 121.10 61 70.44 Changed Protein family FAM219A
FAM220 PF15487 Family 12 38 238.40 39 76.16 Changed FAM220 family
FAM221 PF14753 Family 21 242 128.80 30 52.00 Changed Protein FAM221A/B
FAM222A PF15258 Family 13 188 292.90 39 81.02 Changed Protein family of FAM222A
FAM24 PF15193 Family 19 48 67.00 50 66.65 Changed FAM24 family
FAM25 PF15825 Family 7 43 62.50 73 64.02 Changed FAM25 family
FAM27 PF15832 Family 6 26 87.50 49 64.79 Changed FAM27 D and E protein family
FAM35_C PF15793 Family 23 68 165.10 48 23.70 Changed Protein family FAM35, C-terminal
FAM47 PF14642 Family 5 323 126.60 34 63.65 Changed FAM47 family
FAM53 PF15242 Family 23 189 260.30 37 72.97 Changed Family of FAM53
FAM60A PF15396 Family 22 147 185.70 57 68.74 Changed Protein Family FAM60A
FAM70 PF14967 Family 17 178 263.30 52 95.63 Changed FAM70 protein
FAM72 PF14976 Family 8 148 122.90 43 60.12 Changed FAM72 protein
FAM75 PF14650 Family 72 362 244.50 25 28.49 Changed FAM75 family
FAM76 PF16046 Family 18 295 222.20 38 81.28 Changed FAM76 protein
FAM86 PF14904 Family 17 163 80.40 40 26.44 Changed Family of unknown function
FAM91_C PF14648 Family 21 478 252.30 24 49.93 Changed FAM91 C-terminus
FAM91_N PF14647 Family 30 311 255.90 45 33.63 Changed FAM91 N-terminus
FAM92 PF06730 Family 2 243 179.20 46 67.92 Changed FAM92 protein
FANCAA PF15146 Family 16 66 384.30 51 51.68 Changed Fanconi anemia-associated
FANCA_interact PF15751 Family 12 30 104.40 60 52.95 Changed FAAP20 FANCA interaction domain
FancD2 PF14631 Family 11 492 559.90 16 75.00 Changed Fanconi anaemia protein FancD2 nuclease
FANCD2OS PF15124 Family 8 45 166.10 78 98.69 Changed FANCD2 opposite strand protein
FANCF PF11107 Family 26 155 228.40 21 68.98 Changed Fanconi anemia group F protein (FANCF)
FANCI_HD1 PF14679 Family 36 152 84.40 36 6.57 Changed FANCI helical domain 1
FANCI_HD2 PF14680 Family 39 228 208.70 27 17.62 Changed FANCI helical domain 2
FANCI_S1 PF14675 Family 31 199 189.90 31 15.96 Changed FANCI solenoid 1
FANCI_S1-cap PF14674 Family 18 69 49.80 61 4.48 Changed FANCI solenoid 1 cap
FANCI_S2 PF14676 Family 49 206 152.20 35 12.21 Changed FANCI solenoid 2
FANCI_S3 PF14677 Family 28 129 203.70 34 17.19 Changed FANCI solenoid 3
FANCI_S4 PF14678 Family 51 213 227.40 31 19.24 Changed FANCI solenoid 4
FANCL_C PF11793 Domain 10 323 68.80 33 13.88 Changed FANCL C-terminal domain
FANCM-MHF_bd PF16783 Domain 25 72 111.60 51 6.00 Changed FANCM to MHF binding domain
Fanconi_A PF03511 Family 15 54 60.30 51 4.82 Changed Fanconi anaemia group A protein
Fanconi_A_N PF15865 Family 29 113 266.40 35 30.70 Changed Fanconi anaemia group A protein N terminus
Fanconi_C PF02106 Family 15 101 378.30 42 97.50 Changed Fanconi anaemia group C protein
FAO_M PF16350 Family 192 986 55.30 29 6.68 Changed FAD dependent oxidoreductase central domain
FAP PF07174 Family 9 30 226.20 49 87.64 Changed Fibronectin-attachment protein (FAP)
Fapy_DNA_glyco PF01149 Domain 838 3037 121.50 27 41.59 Changed Formamidopyrimidine-DNA glycosylase N-terminal domain
Far-17a_AIG1 PF04750 Family 26 688 189.30 22 81.06 Changed FAR-17a/AIG1-like protein
FAR1 PF03101 Domain 32 2588 86.40 25 17.53 Changed FAR1 DNA-binding domain
FARP PF01581 Family 61 1215 10.30 45 31.85 Changed FMRFamide related peptide family
Fasciclin PF02469 Family 121 7518 129.60 20 49.92 Changed Fasciclin domain
Fascin PF06268 Domain 17 897 107.50 22 63.55 Changed Fascin domain
FAST_1 PF06743 Family 143 500 68.30 26 9.93 Changed FAST kinase-like protein, subdomain 1
FAST_2 PF08368 Family 94 419 86.20 27 12.88 Changed FAST kinase-like protein, subdomain 2
FAT PF02259 Family 53 2216 338.00 18 12.84 Changed FAT domain
FATC PF02260 Family 361 2243 31.50 41 1.25 Changed FATC domain
FA_desaturase PF00487 Domain 126 7747 240.90 15 63.56 Changed Fatty acid desaturase
FA_desaturase_2 PF03405 Domain 56 882 274.30 38 85.57 Changed Fatty acid desaturase
FA_FANCE PF11510 Family 2 177 214.50 27 47.78 Changed Fanconi Anaemia group E protein FANCE
FA_hydroxylase PF04116 Family 111 6199 135.00 23 40.91 Changed Fatty acid hydroxylase superfamily
FA_synthesis PF02504 Family 9 1815 312.30 36 92.86 Changed Fatty acid synthesis protein
FBA PF04300 Family 80 458 160.50 36 55.09 Changed F-box associated region
FBA_1 PF07734 Family 99 2343 144.20 19 40.92 Changed F-box associated
FBA_2 PF07735 Family 370 1956 66.90 22 20.47 Changed F-box associated
FBA_3 PF08268 Domain 50 2146 116.70 20 31.47 Changed F-box associated domain
FBD PF08387 Family 324 3253 44.50 26 10.75 Changed FBD
FbpA PF05833 Family 82 1757 373.30 19 58.09 Changed Fibronectin-binding protein A N-terminus (FbpA)
FBPase PF00316 Domain 9 2117 178.80 38 52.86 Changed Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_2 PF06874 Family 158 417 609.30 48 97.43 Changed Firmicute fructose-1,6-bisphosphatase
FBPase_3 PF01950 Family 58 153 341.60 53 96.00 Changed Fructose-1,6-bisphosphatase
FBPase_glpX PF03320 Family 237 1024 307.30 49 92.93 Changed Bacterial fructose-1,6-bisphosphatase, glpX-encoded
FBP_C PF16571 Domain 67 279 141.20 31 78.22 Changed FBP C-terminal treble-clef zinc-finger
FB_lectin PF07367 Family 14 44 130.60 36 77.31 Changed Fungal fruit body lectin
FCD PF07729 Domain 208 12014 125.00 20 52.47 Changed FCD domain
Fcf1 PF04900 Family 165 1306 95.70 38 39.94 Changed Fcf1
Fcf2 PF08698 Family 152 586 95.20 38 32.63 Changed Fcf2 pre-rRNA processing
FCH PF00611 Family 594 3250 79.80 22 11.22 Changed Fes/CIP4, and EFC/F-BAR homology domain
FcoT PF10862 Domain 13 30 153.70 41 85.35 Changed FcoT-like thioesterase domain
FCP1_C PF09309 Domain 22 83 206.30 52 25.87 Changed FCP1, C-terminal
FCSD-flav_bind PF09242 Domain 87 199 68.20 31 16.01 Changed Flavocytochrome c sulphide dehydrogenase, flavin-binding
FctA PF12892 Domain 193 441 124.10 22 35.47 Changed Spy0128-like isopeptide containing domain
FDC-SP PF15215 Family 3 11 64.70 68 70.92 Changed Follicular dendritic cell secreted peptide
FDF PF09532 Domain 10 1004 98.70 24 18.72 Changed FDF domain
FdhD-NarQ PF02634 Family 131 1273 231.60 31 85.05 Changed FdhD/NarQ family
FdhE PF04216 Family 70 315 262.60 25 89.64 Changed Protein involved in formate dehydrogenase formation
FdsD PF11390 Family 104 199 60.80 41 72.42 Changed NADH-dependant formate dehydrogenase delta subunit FdsD
FdtA PF05523 Domain 30 445 126.20 32 85.71 Changed WxcM-like, C-terminal
FDX-ACB PF03147 Domain 107 3224 93.80 30 13.27 Changed Ferredoxin-fold anticodon binding domain
Fe-ADH PF00465 Family 220 6745 352.20 25 82.72 Changed Iron-containing alcohol dehydrogenase
Fe-ADH_2 PF13685 Family 22 471 255.50 30 68.00 Changed Iron-containing alcohol dehydrogenase
Fe-S_assembly PF04384 Family 99 313 64.20 50 89.38 Changed Iron-sulphur cluster assembly
Fe-S_biosyn PF01521 Family 95 4265 103.40 31 71.31 Changed Iron-sulphur cluster biosynthesis
Fea1 PF07692 Family 3 30 334.40 22 50.30 Changed Low iron-inducible periplasmic protein
FecCD PF01032 Family 108 7229 307.80 29 91.77 Changed FecCD transport family
FecR PF04773 Family 110 3603 97.00 25 25.37 Changed FecR protein
Feld-I_B PF09252 Domain 16 39 64.90 41 61.71 Changed Allergen Fel d I-B chain
Fels1 PF05666 Family 15 33 45.30 34 50.15 Changed Fels-1 Prophage Protein-like
FemAB PF02388 Family 28 1595 183.90 15 85.00 Changed FemAB family
FemAB_like PF04339 Family 77 761 345.30 37 88.09 Changed Peptidogalycan biosysnthesis/recognition
FeoA PF04023 Domain 197 3405 72.70 24 43.48 Changed FeoA domain
FeoB_C PF07664 Family 920 2112 53.10 33 7.72 Changed Ferrous iron transport protein B C terminus
FeoB_N PF02421 Domain 117 2163 153.90 42 23.03 Changed Ferrous iron transport protein B
FeoC PF09012 Domain 19 210 69.30 22 73.21 Changed FeoC like transcriptional regulator
Fer2 PF00111 Domain 206 12144 75.30 20 21.42 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_2 PF01799 Domain 1329 4657 76.00 41 14.51 Changed [2Fe-2S] binding domain
Fer2_3 PF13085 Domain 39 3029 108.90 38 41.10 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_4 PF13510 Domain 136 3941 79.50 31 12.00 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_BFD PF04324 Domain 255 3793 51.50 29 10.75 Changed BFD-like [2Fe-2S] binding domain
Fer4 PF00037 Domain 528 10469 23.50 38 7.62 Changed 4Fe-4S binding domain
Fer4_10 PF13237 Domain 60 1946 59.00 28 16.09 Changed 4Fe-4S dicluster domain
Fer4_11 PF13247 Domain 36 3362 93.20 36 33.62 Changed 4Fe-4S dicluster domain
Fer4_12 PF13353 Domain 84 9149 128.20 18 38.49 Changed 4Fe-4S single cluster domain
Fer4_13 PF13370 Domain 67 1703 56.70 30 34.82 Changed 4Fe-4S single cluster domain of Ferredoxin I
Fer4_14 PF13394 Domain 22 4563 108.30 19 33.04 Changed 4Fe-4S single cluster domain
Fer4_15 PF13459 Domain 38 1024 61.70 30 48.07 Changed 4Fe-4S single cluster domain
Fer4_16 PF13484 Domain 231 1944 67.00 36 11.39 Changed 4Fe-4S double cluster binding domain
Fer4_17 PF13534 Domain 86 2924 71.20 31 19.19 Changed 4Fe-4S dicluster domain
Fer4_18 PF13746 Domain 12 766 102.00 51 22.59 Changed 4Fe-4S dicluster domain
Fer4_19 PF06902 Domain 18 279 62.60 31 40.44 Changed Divergent 4Fe-4S mono-cluster
Fer4_2 PF12797 Domain 219 15 22.30 41 9.33 Changed 4Fe-4S binding domain
Fer4_20 PF14691 Domain 208 4101 108.10 34 14.43 Changed Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Fer4_21 PF14697 Domain 37 1962 57.60 36 18.77 Changed 4Fe-4S dicluster domain
Fer4_22 PF17179 Domain 193 379 95.20 44 26.84 Changed 4Fe-4S dicluster domain
Fer4_3 PF12798 Domain 209 109 18.70 47 9.64 Changed 4Fe-4S binding domain
Fer4_4 PF12800 Domain 81 1183 21.80 34 10.45 Changed 4Fe-4S binding domain
Fer4_5 PF12801 Domain 133 4129 46.80 20 19.46 Changed 4Fe-4S binding domain
Fer4_6 PF12837 Domain 138 663 24.40 41 7.49 Changed 4Fe-4S binding domain
Fer4_7 PF12838 Domain 209 9309 58.60 30 16.74 Changed 4Fe-4S dicluster domain
Fer4_8 PF13183 Domain 153 5063 78.30 23 14.62 Changed 4Fe-4S dicluster domain
Fer4_9 PF13187 Family 61 3531 53.10 30 16.54 Changed 4Fe-4S dicluster domain
Fer4_NifH PF00142 Domain 8 859 262.40 47 88.89 Changed 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
FerA PF08165 Domain 57 268 64.40 33 3.44 Changed FerA (NUC095) domain
FerB PF08150 Domain 88 552 74.00 48 4.05 Changed FerB (NUC096) domain
FerI PF08151 Domain 82 477 50.80 47 2.75 Changed FerI (NUC094) domain
Ferlin_C PF16165 Family 11 626 100.90 41 6.16 Changed Ferlin C-terminus
FERM_C PF09380 Domain 50 3124 90.60 27 10.58 Changed FERM C-terminal PH-like domain
FERM_f0 PF16511 Domain 30 490 80.40 40 4.48 Changed N-terminal or F0 domain of Talin-head FERM
FERM_M PF00373 Domain 58 5621 126.90 21 12.03 Changed FERM central domain
FERM_N PF09379 Domain 26 3402 66.00 30 6.96 Changed FERM N-terminal domain
Ferredoxin_N PF16947 Family 17 30 64.20 58 16.01 Changed N-terminal region of 4Fe-4S ferredoxin iron-sulfur binding
Ferric_reduct PF01794 Family 148 6153 128.70 18 20.66 Changed Ferric reductase like transmembrane component
Ferritin PF00210 Domain 172 5365 137.20 20 80.00 Changed Ferritin-like domain
Ferritin-like PF12902 Domain 25 173 217.70 24 41.69 Changed Ferritin-like
Ferritin_2 PF13668 Domain 105 1208 140.60 26 41.85 Changed Ferritin-like domain
Ferrochelatase PF00762 Domain 154 2386 303.60 30 84.22 Changed Ferrochelatase
FeS PF04060 Domain 401 1671 32.60 42 10.03 Changed Putative Fe-S cluster
Fes1 PF08609 Family 111 596 89.20 28 28.37 Changed Nucleotide exchange factor Fes1
FeThRed_A PF02941 Domain 50 169 69.00 49 44.90 Changed Ferredoxin thioredoxin reductase variable alpha chain
FeThRed_B PF02943 Domain 26 350 93.20 37 71.79 Changed Ferredoxin thioredoxin reductase catalytic beta chain
FEZ PF07763 Family 29 278 201.70 43 60.87 Changed FEZ-like protein
Fez1 PF06818 Family 44 394 157.10 37 30.94 Changed Fez1
Fe_bilin_red PF05996 Family 30 284 204.20 29 77.67 Changed Ferredoxin-dependent bilin reductase
Fe_dep_repress PF01325 Domain 9 1920 59.30 29 32.75 Changed Iron dependent repressor, N-terminal DNA binding domain
Fe_dep_repr_C PF02742 Domain 442 1986 66.10 31 35.09 Changed Iron dependent repressor, metal binding and dimerisation domain
Fe_hyd_lg_C PF02906 Domain 137 2282 267.70 27 52.00 Changed Iron only hydrogenase large subunit, C-terminal domain
Fe_hyd_SSU PF02256 Domain 334 963 54.10 34 10.28 Changed Iron hydrogenase small subunit
FF PF01846 Family 126 4203 52.30 24 17.92 Changed FF domain
FG-GAP PF01839 Repeat 182 4041 37.90 34 7.75 Changed FG-GAP repeat
FG-GAP_2 PF14312 Family 78 1566 49.60 34 22.01 Changed FG-GAP repeat
FGase PF05013 Family 329 1014 217.40 25 77.53 Changed N-formylglutamate amidohydrolase
FGE-sulfatase PF03781 Domain 22 4414 227.00 21 51.84 Changed Sulfatase-modifying factor enzyme 1
FGF PF00167 Domain 52 1706 114.40 33 51.81 Changed Fibroblast growth factor
FGF-BP1 PF06473 Family 49 154 195.70 25 91.61 Changed FGF binding protein 1 (FGF-BP1)
FGGY_C PF02782 Domain 64 8331 190.30 24 37.55 Changed FGGY family of carbohydrate kinases, C-terminal domain
FGGY_N PF00370 Domain 11 8565 233.80 23 46.82 Changed FGGY family of carbohydrate kinases, N-terminal domain
FH2 PF02181 Family 41 4185 326.20 22 32.94 Changed Formin Homology 2 Domain
FHA PF00498 Family 199 12606 72.30 25 11.57 Changed FHA domain
FHIPEP PF00771 Family 447 1326 621.30 40 94.34 Changed FHIPEP family
FhuF PF06276 Family 152 1076 157.20 19 29.41 Changed Ferric iron reductase FhuF-like transporter
FhuF_C PF11575 Domain 105 405 21.20 45 8.19 Changed FhuF 2Fe-2S C-terminal domain
Fibin PF15819 Family 12 65 185.10 70 90.51 Changed Fin bud initiation factor homologue
FIBP PF05427 Family 20 188 263.30 34 80.82 Changed Acidic fibroblast growth factor binding (FIBP)
Fibrillarin PF01269 Domain 34 944 209.20 58 71.38 Changed Fibrillarin
Fibrillarin_2 PF10113 Family 13 16 503.70 52 99.75 Changed Fibrillarin-like archaeal protein
Fibrinogen_aC PF12160 Domain 14 50 67.80 52 8.32 Changed Fibrinogen alpha C domain
Fibrinogen_BP PF08017 Domain 3 55 248.60 14 26.31 Changed Fibrinogen binding protein
Fibrinogen_C PF00147 Domain 5 4176 186.70 34 42.04 Changed Fibrinogen beta and gamma chains, C-terminal globular domain
Fibritin_C PF07921 Family 9 2 80.50 29 18.46 Changed Fibritin C-terminal region
Fibroin_P25 PF07294 Family 2 13 140.00 30 68.50 Changed Fibroin P25
Fib_alpha PF08702 Domain 75 224 141.10 30 26.60 Changed Fibrinogen alpha/beta chain family
Fib_succ_major PF09603 Domain 72 348 187.50 18 42.11 Changed Fibrobacter succinogenes major domain (Fib_succ_major)
Fic PF02661 Family 212 5029 98.70 21 31.92 Changed Fic/DOC family
Fic_N PF13784 Family 181 507 81.40 31 22.68 Changed Fic/DOC family N-terminal
FidL_like PF15941 Family 13 42 86.60 21 55.13 Changed FidL-like putative membrane protein
Fig1 PF12351 Family 27 294 180.90 39 60.39 Changed Ca2+ regulator and membrane fusion protein Fig1
FIIND PF13553 Family 40 187 218.50 29 30.12 Changed Function to find
Fijivirus_P9-2 PF06837 Family 1 1 207.00 100 99.52 Changed Fijivirus P9-2 protein
Fiji_64_capsid PF05880 Family 1 1 554.00 100 99.82 Changed Fijivirus 64 kDa capsid protein
Filaggrin PF03516 Repeat 26 232 55.70 50 24.49 Changed Filaggrin
Filament PF00038 Family 28 5223 274.30 32 58.70 Changed Intermediate filament protein
Filament_head PF04732 Family 45 467 83.40 30 16.12 Changed Intermediate filament head (DNA binding) region
Filamin PF00630 Domain 124 10588 93.50 26 33.99 Changed Filamin/ABP280 repeat
Filo_glycop PF01611 Family 2 5 310.40 54 63.76 Changed Filovirus glycoprotein
Filo_VP24 PF06389 Family 2 3 251.30 44 100.00 Changed Filovirus membrane-associated protein VP24
Filo_VP35 PF02097 Family 2 5 242.20 30 58.99 Changed Filoviridae VP35
Fil_haemagg PF05594 Repeat 157 2498 73.80 17 39.18 Changed Haemagluttinin repeat
Fil_haemagg_2 PF13332 Family 62 1431 127.30 16 21.68 Changed Haemagluttinin repeat
Fim-adh_lectin PF09222 Domain 2 1 172.00 100 45.74 Changed Fimbrial adhesin F17-AG, lectin domain
FimA PF16970 Family 3 129 131.40 33 70.04 Changed Type-1 fimbrial protein, A
Fimbrial PF00419 Domain 54 1275 151.10 18 64.27 Changed Fimbrial protein
Fimbrial_CS1 PF04449 Family 11 52 135.70 20 81.60 Changed CS1 type fimbrial major subunit
Fimbrial_K88 PF02432 Family 3 4 229.80 25 88.96 Changed Fimbrial, major and minor subunit
Fimbrial_PilY2 PF14481 Family 1 2 111.00 27 99.11 Changed Type 4 fimbrial biogenesis protein PilY2
Fimbrillin_C PF15495 Domain 50 124 87.50 25 17.18 Changed Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
FimH_man-bind PF09160 Domain 10 26 142.20 34 46.99 Changed FimH, mannose binding
FimP PF09766 Family 65 562 250.60 33 53.97 Changed Fms-interacting protein
FinO_N PF12602 Family 3 4 64.20 68 33.95 Changed Fertility inhibition protein N terminal
Fip1 PF05182 Motif 98 680 43.20 51 7.71 Changed Fip1 motif
Fis1_TPR_C PF14853 Domain 54 673 51.70 40 26.88 Changed Fis1 C-terminal tetratricopeptide repeat
Fis1_TPR_N PF14852 Domain 82 548 32.50 40 18.13 Changed Fis1 N-terminal tetratricopeptide repeat
FISNA PF14484 Family 169 1431 70.60 48 9.37 Changed Fish-specific NACHT associated domain
FIST PF08495 Domain 370 872 194.20 17 41.16 Changed FIST N domain
FIST_C PF10442 Domain 343 905 134.90 19 29.61 Changed FIST C domain
FIVAR PF07554 Domain 206 769 47.10 21 9.84 Changed Uncharacterised Sugar-binding Domain
FixG_C PF11614 Domain 194 703 119.70 22 24.97 Changed IG-like fold at C-terminal of FixG, putative oxidoreductase
FixH PF05751 Family 68 525 139.20 18 84.07 Changed FixH
FixO PF02433 Family 120 751 197.70 46 62.53 Changed Cytochrome C oxidase, mono-heme subunit/FixO
FixP_N PF14715 Domain 179 629 48.00 41 15.76 Changed N-terminal domain of cytochrome oxidase-cbb3, FixP
FixQ PF05545 Family 78 486 45.70 26 76.46 Changed Cbb3-type cytochrome oxidase component FixQ
FixS PF03597 Family 210 565 43.70 40 71.02 Changed Cytochrome oxidase maturation protein cbb3-type
FKBP_C PF00254 Domain 140 13517 97.40 26 37.84 Changed FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_N PF01346 Family 125 1189 102.10 28 43.90 Changed Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
FKS1_dom1 PF14288 Family 92 1235 107.60 41 6.33 Changed 1,3-beta-glucan synthase subunit FKS1, domain-1
FlaA PF04620 Family 9 78 199.50 24 67.94 Changed Flagellar filament outer layer protein Flaa
FlaC_arch PF05377 Family 28 48 55.50 37 14.46 Changed Flagella accessory protein C (FlaC)
FlaE PF07559 Family 159 858 139.90 21 29.47 Changed Flagellar basal body protein FlaE
FlaF PF07309 Family 67 202 109.60 28 89.83 Changed Flagellar protein FlaF
FlaG PF03646 Family 124 576 101.10 21 79.73 Changed FlaG protein
Flag1_repress PF03614 Family 2 2 166.00 35 93.79 Changed Repressor of phase-1 flagellin
Flagellar_put PF12611 Family 86 199 23.80 54 18.43 Changed Putative flagellar
Flagellar_rod PF05149 Family 12 94 277.90 35 44.34 Changed Paraflagellar rod protein
Flagellin_C PF00700 Family 25 2839 85.00 30 21.93 Changed Bacterial flagellin C-terminal helical region
Flagellin_D3 PF08884 Domain 34 6 92.00 22 19.46 Changed Flagellin D3 domain
Flagellin_IN PF07196 Motif 128 861 56.50 23 12.06 Changed Flagellin hook IN motif
Flagellin_N PF00669 Family 27 3214 136.20 28 34.88 Changed Bacterial flagellin N-terminal helical region
Flavin_Reduct PF01613 Domain 90 5572 153.70 19 68.02 Changed Flavin reductase like domain
Flavi_capsid PF01003 Family 27 2 115.50 21 3.40 Changed Flavivirus capsid protein C
Flavi_DEAD PF07652 Domain 19 11 133.50 20 7.22 Changed Flavivirus DEAD domain
Flavi_glycoprot PF00869 Domain 2 3 232.30 29 10.02 Changed Flavivirus glycoprotein, central and dimerisation domains
Flavi_glycop_C PF02832 Domain 2 2 96.00 43 2.82 Changed Flavivirus glycoprotein, immunoglobulin-like domain
Flavi_M PF01004 Family 2 2 74.00 38 2.18 Changed Flavivirus envelope glycoprotein M
Flavi_NS1 PF00948 Family 2 2 354.00 42 10.41 Changed Flavivirus non-structural Protein NS1
Flavi_NS2A PF01005 Family 2 2 187.00 28 5.50 Changed Flavivirus non-structural protein NS2A
Flavi_NS2B PF01002 Family 2 2 127.00 30 3.73 Changed Flavivirus non-structural protein NS2B
Flavi_NS4A PF01350 Family 2 2 144.00 33 4.23 Changed Flavivirus non-structural protein NS4A
Flavi_NS4B PF01349 Family 2 2 243.00 36 7.14 Changed Flavivirus non-structural protein NS4B
Flavi_NS5 PF00972 Family 1 4 440.00 40 24.03 Changed Flavivirus RNA-directed RNA polymerase
Flavi_propep PF01570 Family 2 2 84.50 36 2.48 Changed Flavivirus polyprotein propeptide
Flavodoxin_1 PF00258 Domain 61 6302 138.20 21 22.85 Changed Flavodoxin
Flavodoxin_2 PF02525 Domain 245 3344 185.60 20 89.65 Changed Flavodoxin-like fold
Flavodoxin_3 PF12641 Domain 23 248 147.60 25 88.21 Changed Flavodoxin domain
Flavodoxin_4 PF12682 Domain 2 864 146.80 29 79.52 Changed Flavodoxin
Flavodoxin_5 PF12724 Domain 47 992 130.10 18 60.86 Changed Flavodoxin domain
Flavodoxin_NdrI PF07972 Domain 63 498 121.00 41 81.47 Changed NrdI Flavodoxin like
Flavokinase PF01687 Domain 1221 2986 127.60 34 42.64 Changed Riboflavin kinase
Flavoprotein PF02441 Family 91 4947 177.20 23 57.01 Changed Flavoprotein
FlbD PF06289 Family 174 311 58.80 42 80.41 Changed Flagellar protein (FlbD)
FlbT PF07378 Family 66 185 122.80 32 87.46 Changed Flagellar protein FlbT
FleQ PF06490 Domain 45 147 112.70 25 23.27 Changed Flagellar regulatory protein FleQ
Flexi_CP PF00286 Family 8 8 138.80 34 42.73 Changed Viral coat protein
Flexi_CP_N PF08358 Family 25 1 52.00 100 17.11 Changed Carlavirus coat
FlgD PF03963 Family 54 1088 75.00 31 35.52 Changed Flagellar hook capping protein - N-terminal region
FlgD_ig PF13860 Domain 48 976 77.30 22 17.03 Changed FlgD Ig-like domain
FLgD_tudor PF13861 Domain 177 509 134.50 21 58.53 Changed FlgD Tudor-like domain
FlgH PF02107 Family 288 804 181.70 32 77.82 Changed Flagellar L-ring protein
FlgI PF02119 Family 262 813 331.10 44 90.50 Changed Flagellar P-ring protein
FlgM PF04316 Family 291 850 57.60 25 58.85 Changed Anti-sigma-28 factor, FlgM
FlgN PF05130 Family 94 752 142.90 17 92.11 Changed FlgN protein
FlgT_C PF16538 Domain 32 97 75.70 26 20.19 Changed Flagellar assembly protein T, C-terminal domain
FlgT_M PF16539 Domain 33 86 154.20 24 39.61 Changed Flagellar assembly protein T, middle domain
FlgT_N PF16548 Domain 28 98 87.50 27 22.61 Changed Flagellar assembly protein T, N-terminal domain
Flg_bbr_C PF06429 Domain 453 5580 77.80 23 22.75 Changed Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod PF00460 Family 16 5794 30.00 36 9.94 Changed Flagella basal body rod protein
Flg_hook PF02120 Domain 214 1264 84.20 20 17.47 Changed Flagellar hook-length control protein FliK
Flg_new PF09479 Family 391 3520 67.30 20 16.71 Changed Listeria-Bacteroides repeat domain (List_Bact_rpt)
FlhC PF05280 Family 37 208 170.60 48 83.65 Changed Flagellar transcriptional activator (FlhC)
FlhD PF05247 Family 38 195 100.50 43 92.04 Changed Flagellar transcriptional activator (FlhD)
FlhE PF06366 Family 21 68 103.60 36 74.64 Changed Flagellar protein FlhE
FliC PF12445 Family 26 5 137.80 20 27.07 Changed Flagellin protein
FliC_SP PF12613 Family 4 12 53.90 61 14.03 Changed Flagellin structural protein
FliD_C PF07195 Family 26 1026 240.90 22 45.72 Changed Flagellar hook-associated protein 2 C-terminus
FliD_N PF02465 Family 486 936 98.60 24 17.71 Changed Flagellar hook-associated protein 2 N-terminus
FliE PF02049 Family 274 1106 89.10 27 83.38 Changed Flagellar hook-basal body complex protein FliE
FliG_C PF01706 Domain 351 1158 107.90 38 31.56 Changed FliG C-terminal domain
FliG_M PF14841 Family 307 1123 75.40 33 22.09 Changed FliG middle domain
FliG_N PF14842 Family 367 1110 102.80 29 30.21 Changed FliG N-terminal domain
FliH PF02108 Family 36 950 131.20 18 51.23 Changed Flagellar assembly protein FliH
FliJ PF02050 Family 86 827 122.80 18 82.85 Changed Flagellar FliJ protein
FliL PF03748 Family 528 1200 99.80 21 59.33 Changed Flagellar basal body-associated protein FliL
FLILHELTA PF10306 Family 62 214 87.80 35 33.39 Changed Hypothetical protein FLILHELTA
FliM PF02154 Family 7 959 191.10 31 56.82 Changed Flagellar motor switch protein FliM
FliMN_C PF01052 Family 763 2488 72.30 27 27.19 Changed Type III flagellar switch regulator (C-ring) FliN C-term
FliN_N PF16973 Domain 14 65 47.50 41 29.55 Changed Flagellar motor switch protein FliN N-terminal
FliO PF04347 Family 213 881 90.00 18 55.31 Changed Flagellar biosynthesis protein, FliO
FliP PF00813 Family 433 1264 193.80 49 77.59 Changed FliP family
FliS PF02561 Family 430 977 115.50 29 81.94 Changed Flagellar protein FliS
FliS_cochap PF16522 Domain 8 14 146.30 31 80.92 Changed Flagellar FLiS export co-chaperone, HP1076
FliT PF05400 Family 100 261 83.70 21 72.42 Changed Flagellar protein FliT
FliW PF02623 Family 263 463 119.30 29 81.07 Changed FliW protein
FliX PF10768 Family 33 70 136.30 33 96.95 Changed Class II flagellar assembly regulator
Flo11 PF10182 Domain 33 95 141.60 26 19.32 Changed Flo11 domain
Flocculin PF00624 Repeat 384 1079 41.00 44 25.03 Changed Flocculin repeat
Flocculin_t3 PF13928 Repeat 242 550 43.40 42 14.35 Changed Flocculin type 3 repeat
Flot PF15975 Family 32 758 114.10 28 23.43 Changed Flotillin
FLO_LFY PF01698 Family 12 75 318.10 58 91.15 Changed Floricaula / Leafy protein
Flp1_like PF16982 Family 73 153 48.50 40 76.59 Changed Putative Flagellin, Flp1-like, domain
FlpD PF02662 Family 235 578 115.60 36 32.22 Changed Methyl-viologen-reducing hydrogenase, delta subunit
Flp_C PF05202 Family 1 6 175.20 75 59.99 Changed Recombinase Flp protein
Flp_Fap PF04964 Family 24 660 46.20 36 71.94 Changed Flp/Fap pilin component
Flp_N PF03930 Domain 7 2 85.00 100 21.07 Changed Recombinase Flp protein N-terminus
Flt3_lig PF02947 Domain 9 47 116.50 71 39.06 Changed flt3 ligand
Flu_B_M2 PF04772 Family 1 1 109.00 100 100.00 Changed Influenza B matrix protein 2 (BM2)
Flu_B_NS1 PF02942 Family 1 1 247.00 100 87.90 Changed Influenza B non-structural protein (NS1)
Flu_C_NS1 PF03506 Family 1 1 162.00 100 65.85 Changed Influenza C non-structural protein (NS1)
Flu_C_NS2 PF03555 Family 2 2 57.00 98 26.64 Changed Influenza C non-structural protein (NS2)
Flu_M1 PF00598 Domain 2 3 156.00 53 62.23 Changed Influenza Matrix protein (M1)
Flu_M1_C PF08289 Domain 2 4 92.80 35 25.52 Changed Influenza Matrix protein (M1) C-terminal domain
Flu_M2 PF00599 Family 2 2 97.00 85 100.00 Changed Influenza Matrix protein (M2)
Flu_NP PF00506 Family 2 4 506.50 40 95.52 Changed Influenza virus nucleoprotein
Flu_NS1 PF00600 Family 2 2 217.00 67 94.35 Changed Influenza non-structural protein (NS1)
Flu_NS2 PF00601 Family 2 3 93.70 45 77.20 Changed Influenza non-structural protein (NS2)
Flu_PA PF00603 Family 3 7 500.10 41 87.68 Changed Influenza RNA-dependent RNA polymerase subunit PA
Flu_PB1 PF00602 Family 4 6 703.50 37 95.11 Changed Influenza RNA-dependent RNA polymerase subunit PB1
Flu_PB2 PF00604 Family 3 5 687.80 31 89.77 Changed Influenza RNA-dependent RNA polymerase subunit PB2
FlxA PF14282 Family 20 113 97.60 21 59.29 Changed FlxA-like protein
FLYWCH PF04500 Domain 102 1676 59.90 22 25.04 Changed FLYWCH zinc finger domain
FLYWCH_N PF15423 Family 12 73 99.00 64 24.06 Changed FLYWCH-type zinc finger-containing protein
FLYWCH_u PF16662 Disordered 12 126 58.50 40 27.68 Changed FLYWCH-type zinc finger-containing protein 1
FmdA_AmdA PF03069 Family 77 1816 217.60 21 85.08 Changed Acetamidase/Formamidase family
FmdE PF02663 Domain 179 410 130.50 24 53.56 Changed FmdE, Molybdenum formylmethanofuran dehydrogenase operon
FMN_bind PF04205 Domain 1033 2945 84.20 23 28.20 Changed FMN-binding domain
FMN_bind_2 PF04299 Family 313 797 171.70 31 74.76 Changed Putative FMN-binding domain
FMN_dh PF01070 Domain 175 5452 279.40 27 81.06 Changed FMN-dependent dehydrogenase
FMN_red PF03358 Domain 184 8321 146.00 17 69.51 Changed NADPH-dependent FMN reductase
FMO-like PF00743 Family 5 8370 258.80 17 58.89 Changed Flavin-binding monooxygenase-like
Fmp27 PF10344 Domain 26 350 652.00 19 29.99 Changed Mitochondrial protein from FMP27
Fmp27_GFWDK PF10347 Domain 29 534 140.90 32 5.63 Changed RNA pol II promoter Fmp27 protein domain
Fmp27_SW PF10305 Domain 136 291 101.90 34 3.64 Changed RNA pol II promoter Fmp27 protein domain
Fmp27_WPPW PF10359 Domain 99 326 451.30 28 17.86 Changed RNA pol II promoter Fmp27 protein domain
FmrO PF07091 Family 4 17 246.80 23 83.60 Changed Ribosomal RNA methyltransferase (FmrO)
fn1 PF00039 Domain 74 1572 38.20 42 15.54 Changed Fibronectin type I domain
fn2 PF00040 Domain 336 1657 41.40 47 5.90 Changed Fibronectin type II domain
fn3 PF00041 Domain 98 65361 84.90 20 22.81 Changed Fibronectin type III domain
Fn3-like PF14310 Family 749 5819 71.20 30 8.98 Changed Fibronectin type III-like domain
fn3_2 PF16893 Domain 44 267 88.00 60 19.03 Changed Fibronectin type III domain
fn3_3 PF14686 Domain 179 864 75.60 30 12.60 Changed Polysaccharide lyase family 4, domain II
fn3_4 PF16794 Domain 28 185 100.50 48 12.34 Changed Fibronectin-III type domain
fn3_5 PF06280 Domain 30 815 115.40 22 11.52 Changed Fn3-like domain
Fn3_assoc PF13287 Repeat 34 492 63.70 26 7.90 Changed Fn3 associated
FNIP PF05725 Repeat 34 5413 42.90 33 37.54 Changed FNIP Repeat
FNIP_C PF14638 Family 26 222 183.00 44 18.35 Changed Folliculin-interacting protein C-terminus
FNIP_M PF14637 Family 27 232 217.10 46 21.89 Changed Folliculin-interacting protein middle domain
FNIP_N PF14636 Family 57 333 122.20 28 11.02 Changed Folliculin-interacting protein N-terminus
Fn_bind PF02986 Repeat 33 24 36.70 37 13.00 Changed Fibronectin binding repeat
Foamy_BEL PF03274 Family 2 3 158.30 27 60.13 Changed Foamy virus BEL 1/2 protein
Foamy_virus_ENV PF03408 Family 1 1 984.00 100 99.60 Changed Foamy virus envelope protein
Focadhesin PF11229 Family 15 112 390.00 37 33.08 Changed Focadhesin
Focal_AT PF03623 Domain 26 326 120.90 49 13.93 Changed Focal adhesion targeting region
FOG_N PF15888 Domain 11 27 109.40 32 16.08 Changed Folded gastrulation N-terminus
Foie-gras_1 PF11817 Domain 18 634 219.80 20 21.80 Changed Foie gras liver health family 1
FokI_C PF02980 Domain 6 13 136.10 42 23.09 Changed Restriction endonuclease FokI, catalytic domain
FokI_N PF02981 Domain 5 13 140.60 36 23.86 Changed Restriction endonuclease FokI, recognition domain
Folate_carrier PF01770 Family 21 596 301.70 31 82.14 Changed Reduced folate carrier
Folate_rec PF03024 Domain 34 608 158.60 22 41.00 Changed Folate receptor family
FolB PF02152 Domain 948 2485 110.10 26 59.48 Changed Dihydroneopterin aldolase
Folliculin PF11704 Family 98 465 185.10 24 34.20 Changed Vesicle coat protein involved in Golgi to plasma membrane transport
Folliculin_C PF16692 Domain 15 152 200.70 31 36.76 Changed Folliculin C-terminal domain
FOLN PF09289 Domain 27 366 21.90 49 6.18 Changed Follistatin/Osteonectin-like EGF domain
FOP_dimer PF09398 Domain 4 242 75.40 35 26.05 Changed FOP N terminal dimerisation domain
FoP_duplication PF13865 Family 51 982 71.60 24 28.22 Changed C-terminal duplication domain of Friend of PRMT1
Forkhead PF00250 Domain 346 5338 83.60 43 16.76 Changed Forkhead domain
Forkhead_N PF08430 Family 29 214 129.70 32 29.70 Changed Forkhead N-terminal region
Form-deh_trans PF09163 Domain 59 218 43.60 46 14.41 Changed Formate dehydrogenase N, transmembrane
Formyl_trans_C PF02911 Domain 76 3556 99.50 25 26.60 Changed Formyl transferase, C-terminal domain
Formyl_trans_N PF00551 Domain 13 8534 174.00 25 53.04 Changed Formyl transferase
Form_Nir_trans PF01226 Family 585 1609 240.70 26 81.14 Changed Formate/nitrite transporter
Fox-1_C PF12414 Family 13 271 86.10 69 25.71 Changed Calcitonin gene-related peptide regulator C terminal
FOXO-TAD PF16676 Domain 24 285 41.60 57 7.37 Changed Transactivation domain of FOXO protein family
FOXO_KIX_bdg PF16675 Family 21 225 78.20 38 13.63 Changed KIX-binding domain of forkhead box O, CR2
FOXP-CC PF16159 Domain 35 459 68.20 66 11.85 Changed FOXP coiled-coil domain
FPL PF09758 Family 41 435 133.50 46 16.67 Changed Uncharacterised conserved protein
FPN1 PF06963 Family 16 792 348.30 26 79.68 Changed Ferroportin1 (FPN1)
FpoO PF10621 Family 6 17 97.20 44 92.91 Changed F420H2 dehydrogenase subunit FpoO
FPP PF05911 Family 33 1133 263.80 16 71.40 Changed Filament-like plant protein, long coiled-coil
FPRL1_inhibitor PF16104 Family 1 1 105.00 100 78.95 Changed Formyl peptide receptor-like 1 inhibitory protein
FR47 PF08445 Family 9 1029 81.80 20 30.64 Changed FR47-like protein
Fra10Ac1 PF09725 Family 75 346 114.40 50 39.41 Changed Folate-sensitive fragile site protein Fra10Ac1
Frag1 PF10277 Family 66 1546 205.60 18 51.76 Changed Frag1/DRAM/Sfk1 family
fragilysinNterm PF16376 Domain 2 0 0.00 0 0.00 Changed N-terminal domain of fragilysin
FragX_IP PF05994 Family 36 513 563.40 42 66.47 Changed Cytoplasmic Fragile-X interacting family
Frankia_peptide PF14407 Family 8 11 61.00 32 79.41 Changed Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Frataxin_Cyay PF01491 Domain 273 915 106.20 32 65.44 Changed Frataxin-like domain
FRB_dom PF08771 Domain 102 699 98.10 53 4.30 Changed FKBP12-rapamycin binding domain
FRD2 PF03197 Family 1 1 103.00 100 80.47 Changed Bacteriophage FRD2 protein
FRG PF08867 Domain 66 268 95.40 28 30.64 Changed FRG domain
FRG1 PF06229 Domain 10 432 177.00 32 68.16 Changed FRG1-like domain
FRG2 PF15315 Family 10 45 171.00 55 67.98 Changed Facioscapulohumeral muscular dystrophy candidate 2
FrhB_FdhB_C PF04432 Domain 204 789 158.60 22 38.37 Changed Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
FrhB_FdhB_N PF04422 Family 201 702 75.80 26 18.14 Changed Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
Frigida PF07899 Family 60 760 232.30 25 46.12 Changed Frigida-like protein
Fringe PF02434 Family 27 1628 180.00 20 47.51 Changed Fringe-like
Frizzled PF01534 Family 105 1205 281.70 36 50.81 Changed Frizzled/Smoothened family membrane region
FrpC PF06901 Family 3 4 263.50 97 100.00 Changed RTX iron-regulated protein FrpC
FRQ PF09421 Family 15 169 647.90 29 90.03 Changed Frequency clock protein
Frtz PF11768 Family 5 136 412.90 38 67.81 Changed WD repeat-containing and planar cell polarity effector protein Fritz
Fructosamin_kin PF03881 Family 28 1463 265.40 26 84.98 Changed Fructosamine kinase
FSAP_sig_propep PF03032 Family 18 4 37.00 21 9.96 Changed Frog skin active peptide family signal and propeptide
FSA_C PF10479 Domain 2 329 308.60 26 15.93 Changed Fragile site-associated protein C-terminus
FSH1 PF03959 Domain 46 1945 209.00 21 69.64 Changed Serine hydrolase (FSH1)
FSIP1 PF15554 Family 16 82 301.70 36 70.67 Changed FSIP1 family
FSIP2 PF15783 Family 22 202 532.10 26 37.15 Changed Fibrous sheath-interacting protein 2
Fst_toxin PF13955 Domain 7 3 21.00 48 51.64 Changed Toxin Fst, type I toxin-antitoxin system
FTA2 PF13095 Family 45 174 191.60 26 62.03 Changed Kinetochore Sim4 complex subunit FTA2
FTA4 PF13093 Family 60 189 202.20 33 72.51 Changed Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
FTCD PF02971 Domain 42 347 129.90 41 32.60 Changed Formiminotransferase domain
FTCD_C PF04961 Family 288 647 174.40 32 62.16 Changed Formiminotransferase-cyclodeaminase
FTCD_N PF07837 Domain 178 543 168.90 38 47.44 Changed Formiminotransferase domain, N-terminal subdomain
FTH PF01827 Domain 83 1229 138.70 17 39.25 Changed FTH domain
FTHFS PF01268 Family 486 2056 531.80 50 85.39 Changed Formate--tetrahydrofolate ligase
FTO_CTD PF12934 Domain 10 84 135.10 49 29.70 Changed FTO C-terminal domain
FTO_NTD PF12933 Domain 19 93 250.70 51 59.00 Changed FTO catalytic domain
FTP PF07504 Motif 168 955 48.90 27 7.17 Changed Fungalysin/Thermolysin Propeptide Motif
FTR PF01913 Domain 64 147 144.40 47 47.78 Changed Formylmethanofuran-tetrahydromethanopterin formyltransferase
FTR1 PF03239 Family 13 1545 235.70 21 72.46 Changed Iron permease FTR1 family
FTR_C PF02741 Domain 71 147 150.20 50 49.70 Changed FTR, proximal lobe
FtsA PF14450 Domain 524 2959 173.60 20 54.76 Changed Cell division protein FtsA
FtsH_ext PF06480 Family 157 3041 100.70 15 14.88 Changed FtsH Extracellular
FtsJ PF01728 Family 231 5338 184.60 24 48.52 Changed FtsJ-like methyltransferase
FtsK_4TM PF13491 Domain 61 1672 158.40 19 19.12 Changed 4TM region of DNA translocase FtsK/SpoIIIE
Ftsk_gamma PF09397 Domain 500 2757 62.60 45 7.74 Changed Ftsk gamma domain
FtsK_SpoIIIE PF01580 Domain 16 5978 165.80 27 27.29 Changed FtsK/SpoIIIE family
FtsK_SpoIIIE_N PF12538 Family 12 29 111.90 19 7.73 Changed DNA transporter
FtsL PF04999 Family 40 571 91.40 24 81.88 Changed Cell division protein FtsL
FtsQ PF03799 Family 394 1347 118.70 17 42.68 Changed Cell division protein FtsQ
FTSW_RODA_SPOVE PF01098 Family 14 6366 334.80 27 88.60 Changed Cell cycle protein
FtsX PF02687 Family 95 22482 121.30 18 27.98 Changed FtsX-like permease family
FtsZ_C PF12327 Domain 22 3213 95.10 44 23.07 Changed FtsZ family, C-terminal domain
FTZ PF03867 Family 6 12 271.50 56 60.73 Changed Fushi tarazu (FTZ), N-terminal region
Fucokinase PF07959 Family 54 341 342.00 24 42.25 Changed L-fucokinase
Fucose_iso_C PF02952 Domain 29 512 140.50 28 27.58 Changed L-fucose isomerase, C-terminal domain
Fucose_iso_N1 PF07881 Family 50 217 163.00 58 29.22 Changed L-fucose isomerase, first N-terminal domain
Fucose_iso_N2 PF07882 Family 55 213 169.60 54 30.14 Changed L-fucose isomerase, second N-terminal domain
Fucosidase_C PF16757 Domain 56 496 87.10 26 17.67 Changed Alpha-L-fucosidase C-terminal domain
FumaraseC_C PF10415 Domain 758 3100 54.00 42 11.52 Changed Fumarase C C-terminus
Fumarate_red_C PF02300 Domain 42 122 125.00 44 95.21 Changed Fumarate reductase subunit C
Fumarate_red_D PF02313 Domain 37 125 110.50 48 91.80 Changed Fumarate reductase subunit D
Fumble PF03630 Family 127 1291 292.30 35 63.45 Changed Fumble
Fumerase PF05681 Family 431 1682 271.00 37 62.82 Changed Fumarate hydratase (Fumerase)
Fumerase_C PF05683 Family 136 1696 191.70 40 48.83 Changed Fumarase C-terminus
FUN14 PF04930 Family 136 598 94.70 25 53.22 Changed FUN14 family
Fungal_KA1 PF16797 Domain 77 231 122.20 34 10.39 Changed Fungal kinase associated-1 domain
Fungal_lectin PF07938 Domain 4 174 206.40 16 53.55 Changed Fungal fucose-specific lectin
Fungal_trans PF04082 Domain 71 26243 231.80 13 31.02 Changed Fungal specific transcription factor domain
Fungal_trans_2 PF11951 Family 83 10630 276.30 10 50.72 Changed Fungal specific transcription factor domain
Fungus-induced PF10917 Family 13 32 44.60 46 44.73 Changed Fungus-induced protein
Fun_ATP-synt_8 PF05933 Family 7 72 47.90 53 68.60 Changed Fungal ATP synthase protein 8 (A6L)
FUR PF01475 Family 24 5321 118.10 24 80.53 Changed Ferric uptake regulator family
Furin-like PF00757 Domain 40 802 155.10 34 13.01 Changed Furin-like cysteine rich region
Furin-like_2 PF15913 Domain 16 469 93.70 39 16.80 Changed Furin-like repeat, cysteine-rich
Fur_reg_FbpA PF13076 Family 18 56 35.40 37 59.82 Changed Fur-regulated basic protein A
Fur_reg_FbpB PF13040 Family 29 67 39.20 41 81.64 Changed Fur-regulated basic protein B
FUSC PF04632 Family 74 820 513.40 18 86.43 Changed Fusaric acid resistance protein family
FUSC-like PF12805 Domain 54 491 253.50 21 36.28 Changed FUSC-like inner membrane protein yccS
FUSC_2 PF13515 Family 199 2718 135.90 18 18.56 Changed Fusaric acid resistance protein-like
Fuseless PF15993 Family 20 101 193.70 25 66.21 Changed Fuseless
Fusion_F0 PF13044 Family 1 1 436.00 100 98.20 Changed Fusion glycoprotein F0, Isavirus
Fusion_gly PF00523 Family 9 10 489.70 25 89.05 Changed Fusion glycoprotein F0
Fusion_gly_K PF01621 Family 4 6 303.20 26 97.48 Changed Cell fusion glycoprotein K
Fve PF09259 Domain 2 8 83.10 38 85.37 Changed Fungal immunomodulatory protein Fve
FWWh PF14922 Family 33 161 135.00 29 27.43 Changed Protein of unknown function
FXa_inhibition PF14670 Domain 151 6439 36.80 41 5.40 Changed Coagulation Factor Xa inhibitory site
FXMRP1_C_core PF12235 Family 27 333 102.40 53 19.16 Changed Fragile X-related 1 protein core C terminal
FXMR_C2 PF16098 Family 6 99 64.70 66 13.11 Changed Fragile X-related mental retardation protein C-terminal region 2
FXR_C1 PF16096 Family 9 149 75.80 69 12.21 Changed Fragile X-related 1 protein C-terminal region 2
FXR_C3 PF16097 Family 13 76 64.90 61 10.46 Changed Fragile X-related 1 protein C-terminal region 3
FxsA PF04186 Family 242 813 109.40 31 66.51 Changed FxsA cytoplasmic membrane protein
FYDLN_acid PF09538 Family 73 236 114.80 32 92.83 Changed Protein of unknown function (FYDLN_acid)
FYRC PF05965 Family 138 945 82.10 25 4.37 Changed F/Y rich C-terminus
FYRN PF05964 Family 163 930 49.50 31 2.59 Changed F/Y-rich N-terminus
FYTT PF07078 Family 5 147 174.90 35 70.97 Changed Forty-two-three protein
FYVE PF01363 Domain 142 7945 71.20 32 8.25 Changed FYVE zinc finger
FYVE_2 PF02318 Family 18 970 107.50 29 12.48 Changed FYVE-type zinc finger
Fz PF01392 Domain 351 2351 108.50 30 19.03 Changed Fz domain
Fzo_mitofusin PF04799 Family 32 240 156.20 48 21.63 Changed fzo-like conserved region
F_actin_bind PF08919 Domain 29 203 107.10 40 9.16 Changed F-actin binding
F_actin_cap_B PF01115 Family 97 614 219.20 51 80.60 Changed F-actin capping protein, beta subunit
F_bP_aldolase PF01116 Domain 877 3974 295.80 32 89.90 Changed Fructose-bisphosphate aldolase class-II
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z