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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
F-112 PF09645 Domain 2 4 89.80 35 97.29 Changed F-112 protein
F-actin_cap_A PF01267 Family 154 1439 243.50 35 84.80 Changed F-actin capping protein alpha subunit
F-box PF00646 Domain 430 38971 45.10 21 10.15 Changed F-box domain
F-box-like PF12937 Domain 308 38562 49.30 24 9.47 Changed F-box-like
F-box-like_2 PF13013 Family 5 54 96.80 22 27.08 Changed F-box-like domain
F-box_4 PF15966 Domain 37 389 109.80 45 16.10 Changed F-box
F-box_5 PF18511 Domain 37 990 41.40 40 6.99 New F-box
F-protein PF00469 Family 20 28 205.70 55 97.36 Changed Negative factor, (F-Protein) or Nef
F1F0-ATPsyn_F PF10791 Family 57 523 88.10 49 49.83 Changed Mitochondrial F1-F0 ATP synthase subunit F of fungi
F420H2_quin_red PF04075 Family 8 4880 122.10 25 78.17 Changed F420H(2)-dependent quinone reductase
F420_ligase PF01996 Family 158 2921 173.80 27 68.69 Changed F420-0:Gamma-glutamyl ligase
F420_oxidored PF03807 Family 48 15507 93.20 22 34.69 Changed NADP oxidoreductase coenzyme F420-dependent
F5_F8_type_C PF00754 Domain 184 19844 125.70 17 17.90 Changed F5/8 type C domain
FA PF08736 Family 79 3259 43.40 43 4.98 Changed FERM adjacent (FA)
FAA_hydrolase PF01557 Family 51 25749 214.80 25 71.95 Changed Fumarylacetoacetate (FAA) hydrolase family
FAA_hydrolase_N PF09298 Domain 285 2989 99.80 33 23.34 Changed Fumarylacetoacetase N-terminal
FAA_hydro_N_2 PF18288 Domain 31 1242 76.90 49 23.27 New Fumarylacetoacetase N-terminal domain 2
FabA PF07977 Domain 31 10036 124.50 32 55.49 Changed FabA-like domain
FACT-Spt16_Nlob PF14826 Domain 157 1188 157.10 30 15.87 Changed FACT complex subunit SPT16 N-terminal lobe domain
FAD-oxidase_C PF02913 Domain 51 20452 230.10 22 39.75 Changed FAD linked oxidases, C-terminal domain
FAD-SLDH PF12318 Family 36 313 150.70 27 85.17 Changed Membrane bound FAD containing D-sorbitol dehydrogenase
FadA PF09403 Coiled-coil 25 42 97.40 28 67.19 Changed Adhesion protein FadA
FadR_C PF07840 Family 22 424 170.20 42 69.41 Changed FadR C-terminal domain
FAD_binding_1 PF00667 Domain 11 7935 200.90 24 25.78 Changed FAD binding domain
FAD_binding_2 PF00890 Family 62 28636 374.60 26 67.94 Changed FAD binding domain
FAD_binding_3 PF01494 Family 19 58208 285.00 17 65.68 Changed FAD binding domain
FAD_binding_4 PF01565 Domain 128 52753 135.60 21 26.42 Changed FAD binding domain
FAD_binding_5 PF00941 Family 73 12011 179.40 26 35.25 Changed FAD binding domain in molybdopterin dehydrogenase
FAD_binding_6 PF00970 Domain 38 24275 96.70 22 25.49 Changed Oxidoreductase FAD-binding domain
FAD_binding_7 PF03441 Domain 525 8419 185.40 35 37.44 Changed FAD binding domain of DNA photolyase
FAD_binding_8 PF08022 Domain 17 9442 106.70 22 15.83 Changed FAD-binding domain
FAD_binding_9 PF08021 Domain 29 4713 102.90 30 36.73 Changed Siderophore-interacting FAD-binding domain
FAD_oxidored PF12831 Family 112 6531 292.90 21 56.88 Changed FAD dependent oxidoreductase
FAD_SOX PF18371 Domain 29 500 101.10 35 14.88 New Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase
FAD_syn PF06574 Family 53 7460 152.70 32 49.25 Changed FAD synthetase
Fae PF08714 Family 76 683 159.40 42 73.46 Changed Formaldehyde-activating enzyme (Fae)
FAE1_CUT1_RppA PF08392 Family 23 2554 252.60 43 57.89 Changed FAE1/Type III polyketide synthase-like protein
FaeA PF04703 Domain 5 217 56.60 23 27.42 Changed FaeA-like protein
FAF PF11250 Family 74 831 53.50 40 17.79 Changed Fantastic Four meristem regulator
FAIM1 PF06905 Family 42 446 152.00 41 74.59 Changed Fas apoptotic inhibitory molecule (FAIM1)
FAINT PF04385 Family 64 1785 75.90 14 23.25 Changed Domain of unknown function, DUF529
FAM101 PF15068 Family 26 241 163.90 51 90.37 Changed FAM101 family
FAM104 PF15434 Family 12 172 113.30 57 81.08 Changed Family 104
FAM110_C PF14160 Family 45 465 106.50 39 26.31 Changed Centrosome-associated C terminus
FAM110_N PF14161 Family 10 356 99.30 40 28.06 Changed Centrosome-associated N terminus
FAM117 PF15388 Family 28 514 261.00 45 71.60 Changed Protein Family FAM117
FAM124 PF15067 Family 33 291 228.90 53 53.97 Changed FAM124 family
FAM131 PF15010 Family 14 427 246.10 43 77.74 Changed Putative cell signalling
FAM150 PF15129 Family 14 167 101.90 60 66.07 Changed FAM150 family
FAM153 PF15722 Family 9 59 77.00 44 70.76 Changed FAM153 family
FAM163 PF15069 Family 29 227 153.40 50 94.81 Changed FAM163 family
FAM165 PF14981 Family 4 92 50.00 71 81.03 Changed FAM165 family
FAM167 PF11652 Family 20 250 81.80 64 42.46 Changed FAM167
FAM176 PF14851 Family 31 446 135.70 39 48.34 Changed FAM176 family
FAM177 PF14774 Family 26 344 102.40 37 49.45 Changed FAM177 family
FAM178 PF14816 Family 21 261 310.30 36 42.17 Changed Family of unknown function, FAM178
FAM180 PF15173 Family 16 176 133.20 49 76.16 Changed FAM180 family
FAM181 PF15238 Family 7 188 200.90 37 67.97 Changed FAM181
FAM183 PF14886 Family 49 303 104.60 29 61.39 Changed FAM183A and FAM183B related
FAM184 PF15665 Family 16 379 189.30 41 19.16 Changed Family with sequence similarity 184, A and B
FAM193_C PF15914 Family 5 310 53.90 71 4.90 Changed FAM193 family C-terminal
FAM194 PF14977 Family 35 339 182.80 24 29.79 Changed FAM194 protein
FAM195 PF14799 Family 41 387 91.40 34 65.30 Changed FAM195 family
FAM196 PF15265 Family 21 300 379.60 38 87.72 Changed FAM196 family
FAM198 PF15051 Family 6 272 268.20 46 59.90 Changed FAM198 protein
FAM199X PF15814 Family 4 131 279.90 81 85.90 Changed Protein family FAM199X
FAM209 PF15206 Family 22 64 145.90 58 82.64 Changed FAM209 family
Fam20C PF06702 Family 52 856 193.40 47 40.61 Changed Golgi casein kinase, C-terminal, Fam20
FAM212 PF15342 Family 10 195 57.80 61 19.20 Changed FAM212 family
FAM216B PF15107 Family 13 89 107.20 45 54.44 Changed FAM216B protein family
FAM217 PF15344 Family 31 171 219.20 40 48.89 Changed FAM217 family
FAM219A PF15260 Family 14 336 118.20 62 72.14 Changed Protein family FAM219A
FAM220 PF15487 Family 12 52 235.00 33 71.03 Changed FAM220 family
FAM221 PF14753 Family 21 413 132.50 32 53.44 Changed Protein FAM221A/B
FAM222A PF15258 Family 13 324 311.80 40 84.00 Changed Protein family of FAM222A
FAM24 PF15193 Family 16 58 68.40 50 66.13 Changed FAM24 family
FAM25 PF15825 Family 7 56 62.80 71 65.34 Changed FAM25 family
FAM27 PF15832 Family 3 13 91.00 66 69.14 Changed FAM27 D and E protein family
FAM35_C PF15793 Family 23 158 161.40 54 23.07 Changed Protein family FAM35, C-terminal
FAM47 PF14642 Family 3 335 140.80 30 57.63 Changed FAM47 family
FAM53 PF15242 Family 22 344 260.00 40 74.18 Changed Family of FAM53
FAM60A PF15396 Family 22 283 186.40 54 66.34 Changed Protein Family FAM60A
FAM70 PF14967 Family 17 359 255.90 53 96.17 Changed FAM70 protein
FAM72 PF14976 Family 8 356 114.70 39 53.84 Changed FAM72 protein
FAM75 PF14650 Family 56 431 241.00 24 27.76 Changed FAM75 family
FAM76 PF16046 Family 18 607 215.80 40 78.30 Changed FAM76 protein
FAM83 PF07894 Family 67 984 230.00 40 38.55 Changed FAM83 A-H
FAM86 PF14904 Family 16 301 80.20 30 24.60 Changed Family of unknown function
FAM91_C PF14648 Family 20 939 253.90 25 48.61 Changed FAM91 C-terminus
FAM91_N PF14647 Family 28 609 255.30 45 32.46 Changed FAM91 N-terminus
FAM92 PF06730 Family 2 496 176.80 43 66.25 Changed FAM92 protein
FANCAA PF15146 Family 16 129 356.90 50 53.90 Changed Fanconi anemia-associated
FANCA_interact PF15751 Family 11 42 101.10 50 49.76 Changed FAAP20 FANCA interaction domain
FancD2 PF14631 Family 11 1073 574.60 16 77.47 Changed Fanconi anaemia protein FancD2 nuclease
FANCD2OS PF15124 Family 8 58 167.10 78 97.55 Changed FANCD2 opposite strand protein
FANCF PF11107 Family 23 260 231.80 18 70.23 Changed Fanconi anemia group F protein (FANCF)
FANCI_HD1 PF14679 Family 34 335 84.40 36 6.63 Changed FANCI helical domain 1
FANCI_HD2 PF14680 Family 35 482 213.00 29 17.37 Changed FANCI helical domain 2
FANCI_S1 PF14675 Family 28 436 191.10 28 15.73 Changed FANCI solenoid 1
FANCI_S1-cap PF14674 Family 18 129 48.80 61 4.14 Changed FANCI solenoid 1 cap
FANCI_S2 PF14676 Family 45 446 153.30 34 12.06 Changed FANCI solenoid 2
FANCI_S3 PF14677 Family 27 265 208.00 36 16.71 Changed FANCI solenoid 3
FANCI_S4 PF14678 Family 47 476 227.30 29 18.99 Changed FANCI solenoid 4
FANCL_C PF11793 Domain 10 682 67.80 34 14.36 Changed FANCL C-terminal domain
FANCM-MHF_bd PF16783 Domain 24 136 113.00 49 6.08 Changed FANCM to MHF binding domain
Fanconi_A PF03511 Family 14 110 59.70 49 4.80 Changed Fanconi anaemia group A protein
Fanconi_A_N PF15865 Family 29 231 277.90 32 32.82 Changed Fanconi anaemia group A protein N terminus
Fanconi_C PF02106 Family 15 172 413.40 45 97.20 Changed Fanconi anaemia group C protein
FANC_SAP PF18081 Domain 46 277 52.70 33 9.46 New Fanconi anemia-associated nuclease SAP domain
FAO_M PF16350 Family 185 3512 55.40 29 6.71 Changed FAD dependent oxidoreductase central domain
FAP PF07174 Family 9 133 239.70 51 84.44 Changed Fibronectin-attachment protein (FAP)
FAP206 PF12018 Family 56 361 251.10 25 41.14 Changed Domain of unknown function
FapA PF03961 Family 96 1602 418.30 21 77.66 Changed Flagellar Assembly Protein A
Fapy_DNA_glyco PF01149 Domain 820 9797 121.60 27 42.20 Changed Formamidopyrimidine-DNA glycosylase N-terminal domain
Far-17a_AIG1 PF04750 Family 26 1360 189.90 22 79.83 Changed FAR-17a/AIG1-like protein
FAR1 PF03101 Domain 16 4682 87.00 28 16.89 Changed FAR1 DNA-binding domain
FARP PF01581 Family 61 2415 10.40 44 30.41 Changed FMRFamide related peptide family
Fasciclin PF02469 Domain 121 18024 130.10 22 52.34 Changed Fasciclin domain
Fascin PF06268 Domain 17 1588 107.20 23 59.80 Changed Fascin domain
FAST_1 PF06743 Family 137 892 67.80 25 9.98 Changed FAST kinase-like protein, subdomain 1
FAST_2 PF08368 Family 90 786 86.40 25 12.84 Changed FAST kinase-like protein, subdomain 2
Fas_alpha_ACP PF18325 Domain 53 888 157.70 50 7.63 New Fatty acid synthase subunit alpha Acyl carrier domain
FAS_I_H PF18314 Domain 15 910 181.60 39 8.51 New Fatty acid synthase type I helical domain
FAS_meander PF17951 Domain 34 798 137.90 34 5.89 New Fatty acid synthase meander beta sheet domain
FAS_N PF17828 Domain 9 592 125.80 38 5.33 New N-terminal domain in fatty acid synthase subunit beta
FAT PF02259 Family 53 4235 338.10 19 12.86 Changed FAT domain
FATC PF02260 Family 348 4379 31.50 41 1.24 Changed FATC domain
FA_desaturase PF00487 Domain 126 21042 242.00 14 65.39 Changed Fatty acid desaturase
FA_desaturase_2 PF03405 Domain 49 2368 285.00 34 88.59 Changed Fatty acid desaturase
FA_FANCE PF11510 Family 2 295 216.40 25 48.25 Changed Fanconi Anaemia group E protein FANCE
FA_hydroxylase PF04116 Family 110 15641 135.60 23 42.52 Changed Fatty acid hydroxylase superfamily
FA_synthesis PF02504 Family 9 5407 314.20 36 93.04 Changed Fatty acid synthesis protein
FBA PF04300 Family 78 724 157.50 36 52.71 Changed F-box associated region
FBA_1 PF07734 Family 99 3008 143.80 18 39.92 Changed F-box associated
FBA_2 PF07735 Family 368 3759 66.60 21 20.43 Changed F-box associated
FBA_3 PF08268 Domain 50 2998 117.50 18 30.93 Changed F-box associated domain
FBD PF08387 Family 280 4572 44.20 25 10.35 Changed FBD
FbpA PF05833 Family 81 3974 376.60 20 60.40 Changed Fibronectin-binding protein A N-terminus (FbpA)
FBPase PF00316 Domain 8 5176 181.50 40 53.54 Changed Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_2 PF06874 Family 153 925 609.90 48 97.60 Changed Firmicute fructose-1,6-bisphosphatase
FBPase_3 PF01950 Family 57 387 342.50 50 93.77 Changed Fructose-1,6-bisphosphatase
FBPase_glpX PF03320 Family 232 3483 304.80 51 92.59 Changed Bacterial fructose-1,6-bisphosphatase, glpX-encoded
FbpC_C_terminal PF17845 Domain 3 4 54.80 49 15.78 New FbpC C-terminal regulatory nucleotide binding domain
FBP_C PF16571 Domain 65 1045 142.90 32 79.99 Changed FBP C-terminal treble-clef zinc-finger
FB_lectin PF07367 Family 14 140 129.40 35 69.59 Changed Fungal fruit body lectin
FCD PF07729 Domain 207 46579 125.00 20 52.67 Changed FCD domain
Fcf1 PF04900 Family 158 2389 95.40 39 39.35 Changed Fcf1
Fcf2 PF08698 Family 148 1087 95.00 39 32.29 Changed Fcf2 pre-rRNA processing
FCH PF00611 Family 577 6389 79.90 22 11.06 Changed Fes/CIP4, and EFC/F-BAR homology domain
FcoT PF10862 Domain 13 98 153.20 41 84.21 Changed FcoT-like thioesterase domain
FCP1_C PF09309 Domain 21 158 199.20 50 25.27 Changed FCP1, C-terminal
FCSD-flav_bind PF09242 Domain 85 705 68.00 32 16.18 Changed Flavocytochrome c sulphide dehydrogenase, flavin-binding
FctA PF12892 Domain 175 1024 124.80 23 33.46 Changed Spy0128-like isopeptide containing domain
FDC-SP PF15215 Family 3 14 64.80 73 71.87 Changed Follicular dendritic cell secreted peptide
FDF PF09532 Domain 10 1959 100.10 24 18.80 Changed FDF domain
FdhD-NarQ PF02634 Family 129 4484 233.90 32 85.78 Changed FdhD/NarQ family
FdhE PF04216 Family 66 849 269.80 26 91.10 Changed Protein involved in formate dehydrogenase formation
FdsD PF11390 Family 101 832 60.60 41 72.26 Changed NADH-dependant formate dehydrogenase delta subunit FdsD
FdtA PF05523 Domain 30 1409 127.70 32 86.15 Changed WxcM-like, C-terminal
FDX-ACB PF03147 Domain 107 8744 94.20 30 12.79 Changed Ferredoxin-fold anticodon binding domain
Fe-ADH PF00465 Family 219 18101 354.20 25 83.75 Changed Iron-containing alcohol dehydrogenase
Fe-ADH_2 PF13685 Family 21 1285 254.90 31 67.74 Changed Iron-containing alcohol dehydrogenase
Fe-S_assembly PF04384 Family 97 1041 64.30 50 90.70 Changed Iron-sulphur cluster assembly
Fe-S_biosyn PF01521 Family 95 13050 103.10 32 76.22 Changed Iron-sulphur cluster biosynthesis
Fea1 PF07692 Family 3 46 310.40 19 50.85 Changed Low iron-inducible periplasmic protein
FecCD PF01032 Family 107 23459 307.80 29 91.94 Changed FecCD transport family
FecR PF04773 Family 108 14684 97.10 26 25.45 Changed FecR protein
Feld-I_B PF09252 Domain 15 44 65.00 41 59.77 Changed Allergen Fel d I-B chain
Fels1 PF05666 Family 14 86 45.30 33 54.92 Changed Fels-1 Prophage Protein-like
FemAB PF02388 Family 25 3931 184.50 14 83.75 Changed FemAB family
FemAB_like PF04339 Family 76 2646 348.50 37 90.76 Changed Peptidogalycan biosysnthesis/recognition
FeoA PF04023 Domain 196 9470 73.20 23 44.59 Changed FeoA domain
FeoB_associated PF12669 Family 183 1049 44.00 27 72.14 Changed FeoB-associated Cys-rich membrane protein
FeoB_C PF07664 Family 906 5537 53.10 31 7.82 Changed Ferrous iron transport protein B C terminus
FeoB_Cyto PF17910 Domain 470 3005 88.30 21 12.76 New FeoB cytosolic helical domain
FeoB_N PF02421 Domain 116 5641 155.20 42 23.51 Changed Ferrous iron transport protein B
FeoC PF09012 Domain 17 538 69.10 23 78.23 Changed FeoC like transcriptional regulator
Fer2 PF00111 Domain 206 39911 75.20 20 23.35 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_2 PF01799 Domain 1288 16091 76.30 42 18.76 Changed [2Fe-2S] binding domain
Fer2_3 PF13085 Domain 38 9170 109.20 38 41.77 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_4 PF13510 Domain 133 12818 80.10 30 11.93 Changed 2Fe-2S iron-sulfur cluster binding domain
Fer2_BFD PF04324 Domain 249 12534 51.30 29 10.54 Changed BFD-like [2Fe-2S] binding domain
Fer4 PF00037 Domain 528 26753 23.50 39 7.92 Changed 4Fe-4S binding domain
Fer4_10 PF13237 Domain 59 5044 60.40 27 16.73 Changed 4Fe-4S dicluster domain
Fer4_11 PF13247 Domain 34 9527 93.60 36 31.96 Changed 4Fe-4S dicluster domain
Fer4_12 PF13353 Domain 82 24899 127.20 18 37.92 Changed 4Fe-4S single cluster domain
Fer4_13 PF13370 Domain 65 4907 57.20 30 40.79 Changed 4Fe-4S single cluster domain of Ferredoxin I
Fer4_14 PF13394 Domain 22 12747 108.00 19 33.44 Changed 4Fe-4S single cluster domain
Fer4_15 PF13459 Domain 37 3238 61.70 31 51.78 Changed 4Fe-4S single cluster domain
Fer4_16 PF13484 Domain 227 6002 66.50 38 12.33 Changed 4Fe-4S double cluster binding domain
Fer4_17 PF13534 Domain 82 7549 71.50 31 18.16 Changed 4Fe-4S dicluster domain
Fer4_18 PF13746 Domain 12 2900 102.30 53 22.68 Changed 4Fe-4S dicluster domain
Fer4_19 PF06902 Domain 18 987 63.20 32 44.53 Changed Divergent 4Fe-4S mono-cluster
Fer4_2 PF12797 Domain 214 40 22.20 41 8.20 Changed 4Fe-4S binding domain
Fer4_20 PF14691 Domain 204 11822 108.50 34 15.78 Changed Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Fer4_21 PF14697 Domain 35 5300 57.60 38 18.42 Changed 4Fe-4S dicluster domain
Fer4_22 PF17179 Domain 193 1050 95.10 43 26.72 Changed 4Fe-4S dicluster domain
Fer4_23 PF18009 Domain 6 117 83.60 53 21.98 New 4Fe-4S iron-sulfur cluster binding domain
Fer4_24 PF18109 Domain 4 251 34.80 69 4.41 New Ferredoxin I 4Fe-4S cluster domain
Fer4_3 PF12798 Domain 204 234 19.40 47 9.39 Changed 4Fe-4S binding domain
Fer4_4 PF12800 Domain 81 2803 22.00 33 10.54 Changed 4Fe-4S binding domain
Fer4_5 PF12801 Domain 131 11110 47.80 21 17.32 Changed 4Fe-4S binding domain
Fer4_6 PF12837 Domain 134 1550 24.50 38 7.25 Changed 4Fe-4S binding domain
Fer4_7 PF12838 Domain 208 25648 60.20 30 17.16 Changed 4Fe-4S dicluster domain
Fer4_8 PF13183 Domain 153 16128 78.80 23 14.67 Changed 4Fe-4S dicluster domain
Fer4_9 PF13187 Family 61 9339 53.90 30 16.03 Changed 4Fe-4S dicluster domain
Fer4_NifH PF00142 Domain 8 2129 261.40 46 88.89 Changed 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
FerA PF08165 Domain 57 520 64.60 35 3.42 Changed FerA (NUC095) domain
FerB PF08150 Domain 82 1138 73.30 48 4.14 Changed FerB (NUC096) domain
FerI PF08151 Domain 80 965 50.40 50 2.80 Changed FerI (NUC094) domain
Ferlin_C PF16165 Family 11 1223 98.00 42 6.05 Changed Ferlin C-terminus
FERM_C PF09380 Domain 50 7087 90.60 27 10.49 Changed FERM C-terminal PH-like domain
FERM_f0 PF16511 Domain 27 721 79.50 45 4.03 Changed N-terminal or F0 domain of Talin-head FERM
FERM_F1 PF18379 Domain 46 478 92.00 42 8.56 New FERM F1 ubiquitin-like domain
FERM_F2 PF18377 Domain 27 484 120.70 43 11.36 New FERM F2 acyl-CoA binding protein-like domain
FERM_M PF00373 Domain 58 12230 125.20 23 11.93 Changed FERM central domain
FERM_N PF09379 Domain 26 7384 66.00 30 6.87 Changed FERM N-terminal domain
FERM_N_2 PF18038 Domain 14 549 91.10 50 8.91 New FERM N-terminal domain
Ferredoxin_N PF16947 Family 17 110 63.50 48 16.89 Changed N-terminal region of 4Fe-4S ferredoxin iron-sulfur binding
Ferric_reduct PF01794 Family 144 13369 128.00 18 22.13 Changed Ferric reductase like transmembrane component
Ferritin PF00210 Domain 171 15972 137.70 20 81.61 Changed Ferritin-like domain
Ferritin-like PF12902 Domain 25 541 221.70 26 42.57 Changed Ferritin-like
Ferritin_2 PF13668 Domain 102 3133 141.20 26 44.35 Changed Ferritin-like domain
Ferrochelatase PF00762 Domain 154 7155 308.60 30 86.70 Changed Ferrochelatase
FeS PF04060 Domain 394 4216 32.60 43 10.23 Changed Putative Fe-S cluster
Fes1 PF08609 Family 108 1055 89.80 28 28.16 Changed Nucleotide exchange factor Fes1
FeS_assembly_P PF01883 Domain 42 13632 74.40 26 32.32 Changed Iron-sulfur cluster assembly protein
FeThRed_A PF02941 Domain 49 298 69.70 49 50.14 Changed Ferredoxin thioredoxin reductase variable alpha chain
FeThRed_B PF02943 Domain 25 740 92.80 35 68.65 Changed Ferredoxin thioredoxin reductase catalytic beta chain
FEZ PF07763 Family 27 610 196.60 39 59.78 Changed FEZ-like protein
Fez1 PF06818 Coiled-coil 44 670 161.80 35 31.41 Changed Fez1
Fe_bilin_red PF05996 Family 29 594 207.20 28 79.58 Changed Ferredoxin-dependent bilin reductase
Fe_dep_repress PF01325 Domain 9 6091 59.40 30 31.33 Changed Iron dependent repressor, N-terminal DNA binding domain
Fe_dep_repr_C PF02742 Domain 435 6280 66.90 33 33.92 Changed Iron dependent repressor, metal binding and dimerisation domain
Fe_hyd_lg_C PF02906 Domain 137 4686 267.40 29 51.22 Changed Iron only hydrogenase large subunit, C-terminal domain
Fe_hyd_SSU PF02256 Domain 328 2027 54.30 35 10.14 Changed Iron hydrogenase small subunit
FF PF01846 Family 122 8950 52.20 24 18.53 Changed FF domain
FG-GAP PF01839 Repeat 182 9854 38.00 34 8.98 Changed FG-GAP repeat
FG-GAP_2 PF14312 Family 78 3810 49.60 34 22.78 Changed FG-GAP repeat
FGAR-AT_linker PF18072 Domain 370 7845 47.50 39 4.66 New Formylglycinamide ribonucleotide amidotransferase linker domain
FGAR-AT_N PF18076 Domain 529 2980 116.70 29 9.08 New Formylglycinamide ribonucleotide amidotransferase N-terminal
FGase PF05013 Family 315 4191 217.20 25 78.55 Changed N-formylglutamate amidohydrolase
FGE-sulfatase PF03781 Domain 22 14664 231.20 22 54.95 Changed Sulfatase-modifying factor enzyme 1
FGF PF00167 Domain 51 3237 112.30 33 51.64 Changed Fibroblast growth factor
FGF-BP1 PF06473 Family 46 286 194.00 25 86.58 Changed FGF binding protein 1 (FGF-BP1)
FGFR3_TM PF18123 Domain 6 660 30.90 53 4.02 New Fibroblast growth factor receptor 3 transmembrane domain
FGGY_C PF02782 Domain 64 24861 189.60 25 37.71 Changed FGGY family of carbohydrate kinases, C-terminal domain
FGGY_N PF00370 Domain 11 25768 235.50 24 47.63 Changed FGGY family of carbohydrate kinases, N-terminal domain
FH2 PF02181 Family 41 7721 336.30 23 32.36 Changed Formin Homology 2 Domain
FHA PF00498 Family 198 29639 71.60 25 11.85 Changed FHA domain
FHA_2 PF17913 Domain 15 571 92.30 34 20.63 New FHA domain
FHIPEP PF00771 Family 437 4380 623.30 39 94.40 Changed FHIPEP family
FhuF PF06276 Family 151 3558 158.00 19 29.58 Changed Ferric iron reductase FhuF-like transporter
FhuF_C PF11575 Domain 99 1439 21.10 46 8.21 Changed FhuF 2Fe-2S C-terminal domain
Fibin PF15819 Family 12 90 176.50 69 90.71 Changed Fin bud initiation factor homologue
FIBP PF05427 Family 20 390 267.40 32 78.90 Changed Acidic fibroblast growth factor binding (FIBP)
Fibrillarin PF01269 Domain 34 1822 207.50 58 72.10 Changed Fibrillarin
Fibrillarin_2 PF10113 Family 13 25 502.50 52 99.75 Changed Fibrillarin-like archaeal protein
Fibrillin_U_N PF18193 Domain 1 319 35.40 82 1.39 New Fibrillin 1 unique N-terminal domain
Fibrinogen_aC PF12160 Domain 13 71 68.00 47 8.25 Changed Fibrinogen alpha C domain
Fibrinogen_BP PF08017 Domain 3 168 264.40 15 29.91 Changed Fibrinogen binding protein
Fibrinogen_C PF00147 Domain 5 8593 181.80 32 40.33 Changed Fibrinogen beta and gamma chains, C-terminal globular domain
Fibritin_C PF07921 Family 9 39 92.50 26 15.33 Changed Fibritin C-terminal region
Fibroin_P25 PF07294 Family 2 20 154.10 31 70.36 Changed Fibroin P25
Fib_alpha PF08702 Coiled-coil 75 379 141.30 30 28.16 Changed Fibrinogen alpha/beta chain family
Fib_succ_major PF09603 Domain 69 1505 177.70 22 44.99 Changed Fibrobacter succinogenes major domain (Fib_succ_major)
Fic PF02661 Family 212 14159 98.90 22 32.06 Changed Fic/DOC family
Fic_N PF13784 Family 177 1571 81.50 32 22.38 Changed Fic/DOC family N-terminal
FidL_like PF15941 Family 8 75 87.20 26 55.20 Changed FidL-like putative membrane protein
Fig1 PF12351 Family 27 520 184.10 39 61.98 Changed Ca2+ regulator and membrane fusion protein Fig1
FIIND PF13553 Family 39 452 211.80 31 30.76 Changed Function to find
Fijivirus_P9-2 PF06837 Family 1 4 198.80 44 98.88 Changed Fijivirus P9-2 protein
Fiji_64_capsid PF05880 Family 1 6 547.80 51 98.21 Changed Fijivirus 64 kDa capsid protein
Filaggrin PF03516 Repeat 26 367 56.40 46 26.80 Changed Filaggrin
Filament PF00038 Coiled-coil 28 9043 270.70 32 58.57 Changed Intermediate filament protein
Filament_head PF04732 Family 45 735 81.00 29 15.92 Changed Intermediate filament head (DNA binding) region
Filamin PF00630 Domain 124 21821 93.00 26 35.97 Changed Filamin/ABP280 repeat
Filo_glycop PF01611 Family 2 11 313.80 59 66.89 Changed Filovirus glycoprotein
Filo_VP24 PF06389 Family 2 5 251.20 56 100.00 Changed Filovirus membrane-associated protein VP24
Filo_VP35 PF02097 Family 2 7 264.70 39 68.05 Changed Filoviridae VP35
Fil_haemagg PF05594 Repeat 157 6516 74.30 17 38.35 Changed Haemagluttinin repeat
Fil_haemagg_2 PF13332 Family 59 3787 127.90 16 21.88 Changed Hemagglutinin repeat
Fim-adh_lectin PF09222 Domain 2 1 172.00 100 45.74 Changed Fimbrial adhesin F17-AG, lectin domain
FimA PF16970 Family 2 332 131.00 34 70.40 Changed Type-1 fimbrial protein, A
Fimbrial PF00419 Domain 38 2822 150.80 18 63.61 Changed Fimbrial protein
Fimbrial_CS1 PF04449 Family 8 113 134.10 23 81.37 Changed CS1 type fimbrial major subunit
Fimbrial_K88 PF02432 Family 1 2 141.50 20 61.52 Changed Fimbrial, major and minor subunit
Fimbrial_PilY2 PF14481 Family 3 4 102.20 26 94.68 Changed Type 4 fimbrial biogenesis protein PilY2
Fimbrillin_C PF15495 Domain 48 202 88.60 25 17.51 Changed Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
FimH_man-bind PF09160 Domain 7 53 142.30 39 48.72 Changed FimH, mannose binding
FIN1 PF17300 Family 12 33 228.50 34 93.26 Changed Filaments in between nuclei protein-1
FinO_N PF12602 Family 3 11 65.70 64 34.22 Changed Fertility inhibition protein N terminal
Fip1 PF05182 Motif 94 1364 43.30 52 7.57 Changed Fip1 motif
Fis1_TPR_C PF14853 Domain 53 1257 51.80 40 26.15 Changed Fis1 C-terminal tetratricopeptide repeat
Fis1_TPR_N PF14852 Domain 81 998 32.50 41 18.02 Changed Fis1 N-terminal tetratricopeptide repeat
FISNA PF14484 Family 169 1902 70.90 45 8.90 Changed Fish-specific NACHT associated domain
FIST PF08495 Domain 364 2754 193.90 17 42.69 Changed FIST N domain
FIST_C PF10442 Domain 335 2741 136.20 20 30.57 Changed FIST C domain
FIT1_2 PF17357 Family 4 29 85.80 46 42.64 Changed Facilitor Of iron transport 1 and 2
FIVAR PF07554 Domain 204 3517 65.30 23 14.56 Changed FIVAR domain
FixG_C PF11614 Domain 188 2687 119.70 22 25.09 Changed IG-like fold at C-terminal of FixG, putative oxidoreductase
FixH PF05751 Family 68 2137 140.40 18 84.91 Changed FixH
FixO PF02433 Family 119 2915 202.80 47 59.67 Changed Cytochrome C oxidase, mono-heme subunit/FixO
FixP_N PF14715 Domain 174 2543 48.00 42 15.86 Changed N-terminal domain of cytochrome oxidase-cbb3, FixP
FixQ PF05545 Family 76 1933 46.00 27 76.34 Changed Cbb3-type cytochrome oxidase component FixQ
FixS PF03597 Family 205 2323 43.70 40 70.59 Changed Cytochrome oxidase maturation protein cbb3-type
FKBP26_C PF18046 Domain 14 145 71.60 26 28.51 New FKBP26_C-terminal
FKBP_C PF00254 Domain 139 33585 98.20 26 37.72 Changed FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_N PF01346 Domain 414 3549 91.90 28 39.55 Changed Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
FKBP_N_2 PF18023 Domain 8 78 107.60 26 29.77 New BDBT FKBP like N-terminal
FKS1_dom1 PF14288 Family 72 2316 107.20 42 6.37 Changed 1,3-beta-glucan synthase subunit FKS1, domain-1
FlaA PF04620 Family 9 163 191.00 23 65.76 Changed Flagellar filament outer layer protein Flaa
FlaC_arch PF05377 Family 27 127 54.90 41 13.03 Changed Flagella accessory protein C (FlaC)
FlaE PF07559 Family 153 2861 138.50 21 29.52 Changed Flagellar basal body protein FlaE
FlaF PF07309 Family 66 824 111.10 29 90.58 Changed Flagellar protein FlaF
FlaG PF03646 Family 121 1736 100.60 22 79.87 Changed FlaG protein
Flag1_repress PF03614 Family 2 9 160.00 36 92.90 Changed Repressor of phase-1 flagellin
Flagellar_put PF12611 Family 86 637 23.80 53 18.55 Changed Putative flagellar
Flagellar_rod PF05149 Family 11 111 276.70 31 44.24 Changed Paraflagellar rod protein
Flagellin_C PF00700 Family 24 9535 84.90 29 22.53 Changed Bacterial flagellin C-terminal helical region
Flagellin_D3 PF08884 Domain 34 11 92.10 22 19.28 Changed Flagellin D3 domain
Flagellin_IN PF07196 Motif 128 2618 56.90 23 12.38 Changed Flagellin hook IN motif
Flagellin_N PF00669 Family 27 10610 136.20 28 35.66 Changed Bacterial flagellin N-terminal helical region
Flavin_Reduct PF01613 Domain 88 17677 152.90 19 70.16 Changed Flavin reductase like domain
Flavi_capsid PF01003 Family 27 3 116.30 28 3.41 Changed Flavivirus capsid protein C
Flavi_DEAD PF07652 Domain 19 28 133.50 22 8.91 Changed Flavivirus DEAD domain
Flavi_glycoprot PF00869 Domain 2 4 248.50 34 9.58 Changed Flavivirus glycoprotein, central and dimerisation domains
Flavi_glycop_C PF02832 Domain 2 3 97.00 45 2.85 Changed Flavivirus glycoprotein, immunoglobulin-like domain
Flavi_M PF01004 Family 2 3 74.00 38 2.17 Changed Flavivirus envelope glycoprotein M
Flavi_NS1 PF00948 Family 2 5 279.80 36 12.80 Changed Flavivirus non-structural Protein NS1
Flavi_NS2A PF01005 Family 2 3 186.30 26 5.47 Changed Flavivirus non-structural protein NS2A
Flavi_NS2B PF01002 Family 2 3 126.70 32 3.72 Changed Flavivirus non-structural protein NS2B
Flavi_NS4A PF01350 Family 2 5 112.40 24 5.42 Changed Flavivirus non-structural protein NS4A
Flavi_NS4B PF01349 Family 2 3 243.00 40 7.13 Changed Flavivirus non-structural protein NS4B
Flavi_NS5 PF00972 Family 3 15 439.70 30 35.29 Changed Flavivirus RNA-directed RNA polymerase
Flavi_propep PF01570 Family 2 3 85.30 41 2.50 Changed Flavivirus polyprotein propeptide
Flavodoxin_1 PF00258 Domain 61 14586 137.60 21 23.54 Changed Flavodoxin
Flavodoxin_2 PF02525 Domain 244 10846 187.80 20 90.88 Changed Flavodoxin-like fold
Flavodoxin_3 PF12641 Domain 23 561 145.30 24 86.62 Changed Flavodoxin domain
Flavodoxin_4 PF12682 Domain 1 1911 144.50 29 76.29 Changed Flavodoxin
Flavodoxin_5 PF12724 Domain 44 2913 130.50 18 65.19 Changed Flavodoxin domain
Flavodoxin_NdrI PF07972 Domain 62 1608 120.70 42 82.46 Changed NrdI Flavodoxin like
Flavokinase PF01687 Domain 1198 8552 126.70 34 41.58 Changed Riboflavin kinase
Flavoprotein PF02441 Family 91 14207 176.50 25 56.71 Changed Flavoprotein
FlbD PF06289 Family 173 1004 58.80 42 78.43 Changed Flagellar and Swarming motility proteins
FlbT PF07378 Family 65 767 123.70 33 88.04 Changed Flagellar protein FlbT
FleQ PF06490 Domain 45 509 112.00 24 23.66 Changed Flagellar regulatory protein FleQ
Flexi_CP PF00286 Family 8 115 138.70 37 50.77 Changed Viral coat protein
Flexi_CP_N PF08358 Family 25 47 51.90 39 17.03 Changed Carlavirus coat
FlgD PF03963 Family 53 3702 74.40 30 35.78 Changed Flagellar hook capping protein - N-terminal region
FlgD_ig PF13860 Domain 47 3732 76.20 22 16.26 Changed FlgD Ig-like domain
FLgD_tudor PF13861 Domain 168 1659 134.10 20 58.72 Changed FlgD Tudor-like domain
FlgH PF02107 Family 277 2784 181.40 32 77.45 Changed Flagellar L-ring protein
FlgI PF02119 Family 253 2809 333.50 45 90.46 Changed Flagellar P-ring protein
FlgM PF04316 Family 286 2634 57.60 25 58.96 Changed Anti-sigma-28 factor, FlgM
FlgN PF05130 Family 93 2372 142.80 17 92.02 Changed FlgN protein
FlgO PF17680 Domain 129 601 131.20 25 55.25 New FlgO protein
FlgT_C PF16538 Domain 30 305 76.20 26 20.15 Changed Flagellar assembly protein T, C-terminal domain
FlgT_M PF16539 Domain 31 291 155.60 24 39.96 Changed Flagellar assembly protein T, middle domain
FlgT_N PF16548 Domain 27 311 87.30 27 22.65 Changed Flagellar assembly protein T, N-terminal domain
Flg_bbr_C PF06429 Domain 452 18602 77.90 23 23.02 Changed Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod PF00460 Family 16 19546 30.10 37 10.10 Changed Flagella basal body rod protein
Flg_hook PF02120 Domain 209 4282 84.10 20 17.58 Changed Flagellar hook-length control protein FliK
Flg_new PF09479 Domain 389 7184 67.90 22 15.61 Changed Listeria-Bacteroides repeat domain (List_Bact_rpt)
FlhC PF05280 Family 35 723 169.90 47 86.00 Changed Flagellar transcriptional activator (FlhC)
FlhD PF05247 Family 36 703 100.60 41 92.31 Changed Flagellar transcriptional activator (FlhD)
FlhE PF06366 Family 18 180 103.10 32 74.08 Changed Flagellar protein FlhE
FliC PF12445 Family 26 27 138.60 25 25.45 Changed Flagellin protein
FliC_SP PF12613 Family 4 26 53.60 58 13.97 Changed Flagellin structural protein
FliD_C PF07195 Family 26 3247 240.50 22 46.70 Changed Flagellar hook-associated protein 2 C-terminus
FliD_N PF02465 Family 473 2990 98.20 25 18.17 Changed Flagellar hook-associated protein 2 N-terminus
FliE PF02049 Family 264 3736 89.20 27 83.43 Changed Flagellar hook-basal body complex protein FliE
FliG_C PF01706 Domain 341 3927 107.80 38 31.75 Changed FliG C-terminal domain
FliG_M PF14841 Family 304 3783 75.50 32 22.04 Changed FliG middle domain
FliG_N PF14842 Family 361 3734 102.70 27 30.34 Changed FliG N-terminal domain
FliH PF02108 Family 36 3100 130.70 18 52.02 Changed Flagellar assembly protein FliH
FliJ PF02050 Family 84 2609 123.00 18 83.33 Changed Flagellar FliJ protein
FliL PF03748 Family 513 3962 99.70 21 59.63 Changed Flagellar basal body-associated protein FliL
FLILHELTA PF10306 Family 62 444 88.50 33 35.88 Changed Hypothetical protein FLILHELTA
FliM PF02154 Family 7 3107 190.80 30 56.94 Changed Flagellar motor switch protein FliM
FliMN_C PF01052 Family 743 8297 72.30 27 27.76 Changed Type III flagellar switch regulator (C-ring) FliN C-term
FliN_N PF16973 Domain 12 161 46.80 40 28.86 Changed Flagellar motor switch protein FliN N-terminal
FliO PF04347 Family 204 2969 90.10 18 53.72 Changed Flagellar biosynthesis protein, FliO
FliP PF00813 Family 418 4229 192.80 49 77.67 Changed FliP family
FliS PF02561 Family 419 3116 115.40 29 83.42 Changed Flagellar protein FliS
FliS_cochap PF16522 Domain 7 41 144.70 30 81.19 Changed Flagellar FLiS export co-chaperone, HP1076
FliT PF05400 Family 94 812 82.80 22 74.40 Changed Flagellar protein FliT
FliW PF02623 Family 260 1356 119.20 29 81.68 Changed FliW protein
FliX PF10768 Family 33 256 135.90 34 96.41 Changed Class II flagellar assembly regulator
Flo11 PF10182 Domain 33 139 143.20 25 20.37 Changed Flo11 domain
Flocculin PF00624 Repeat 384 1781 40.90 43 27.40 Changed Flocculin repeat
Flocculin_t3 PF13928 Repeat 235 812 43.30 44 13.61 Changed Flocculin type 3 repeat
Flot PF15975 Family 31 2249 114.60 26 22.94 Changed Flotillin
Flp1_like PF16982 Family 73 354 48.60 38 75.92 Changed Putative Flagellin, Flp1-like, domain
FlpD PF02662 Family 234 1440 114.90 36 33.41 Changed Methyl-viologen-reducing hydrogenase, delta subunit
Flp_C PF05202 Family 1 11 157.20 59 56.10 Changed Recombinase Flp protein
Flp_Fap PF04964 Family 24 2433 46.10 37 73.49 Changed Flp/Fap pilin component
Flp_N PF03930 Domain 7 3 83.70 45 22.19 Changed Recombinase Flp protein N-terminus
Flt3_lig PF02947 Domain 9 71 118.90 66 39.70 Changed flt3 ligand
FluMu_N PF17891 Domain 14 106 49.00 32 39.15 New Mu-like prophage FluMu N-terminal domain
Flu_B_M2 PF04772 Family 1 4 109.00 90 99.77 Changed Influenza B matrix protein 2 (BM2)
Flu_B_NS1 PF02942 Family 1 4 247.00 93 87.90 Changed Influenza B non-structural protein (NS1)
Flu_C_NS1 PF03506 Family 1 2 152.00 30 62.17 Changed Influenza C non-structural protein (NS1)
Flu_C_NS2 PF03555 Family 2 3 57.00 58 25.48 Changed Influenza C non-structural protein (NS2)
Flu_M1 PF00598 Domain 2 45 154.70 80 62.40 Changed Influenza Matrix protein (M1)
Flu_M1_C PF08289 Domain 2 44 93.80 84 37.41 Changed Influenza Matrix protein (M1) C-terminal domain
Flu_M2 PF00599 Family 2 37 96.50 87 99.89 Changed Influenza Matrix protein (M2)
Flu_NP PF00506 Family 2 49 476.50 78 97.88 Changed Influenza virus nucleoprotein
Flu_NS1 PF00600 Family 2 38 215.90 80 95.51 Changed Influenza non-structural protein (NS1)
Flu_NS2 PF00601 Family 2 40 93.90 77 77.51 Changed Influenza non-structural protein (NS2)
Flu_PA PF00603 Family 3 75 447.40 67 89.30 Changed Influenza RNA-dependent RNA polymerase subunit PA
Flu_PB1 PF00602 Family 4 59 588.90 71 92.63 Changed Influenza RNA-dependent RNA polymerase subunit PB1
Flu_PB2 PF00604 Family 3 60 592.00 71 92.80 Changed Influenza RNA-dependent RNA polymerase subunit PB2
FlxA PF14282 Family 20 297 97.40 22 60.41 Changed FlxA-like protein
FLYWCH PF04500 Domain 102 4034 60.50 22 24.52 Changed FLYWCH zinc finger domain
FLYWCH_N PF15423 Family 12 94 99.10 62 24.67 Changed FLYWCH-type zinc finger-containing protein
FLYWCH_u PF16662 Disordered 11 204 41.70 47 26.35 Changed FLYWCH-type zinc finger-containing protein 1
FmdA_AmdA PF03069 Family 76 5906 206.60 19 85.99 Changed Acetamidase/Formamidase family
FmdE PF02663 Domain 175 958 129.80 23 54.64 Changed FmdE, Molybdenum formylmethanofuran dehydrogenase operon
FmiP_Thoc5 PF09766 Family 62 1132 247.50 30 51.03 Changed Fms-interacting protein/Thoc5
FMN_bind PF04205 Domain 1017 7660 84.70 23 28.12 Changed FMN-binding domain
FMN_bind_2 PF04299 Family 305 2903 167.40 30 76.84 Changed Putative FMN-binding domain
FMN_dh PF01070 Domain 175 14301 290.90 26 83.08 Changed FMN-dependent dehydrogenase
FMN_red PF03358 Domain 181 26117 146.10 18 70.28 Changed NADPH-dependent FMN reductase
FMO-like PF00743 Family 5 18650 258.80 17 57.68 Changed Flavin-binding monooxygenase-like
FMP23 PF17315 Family 8 37 137.70 43 74.54 Changed Found in mitochondrial proteome
Fmp27 PF10344 Family 24 625 645.70 20 29.69 Changed Mitochondrial protein from FMP27
Fmp27_GFWDK PF10347 Domain 27 1068 140.50 32 5.69 Changed RNA pol II promoter Fmp27 protein domain
Fmp27_SW PF10305 Domain 132 541 102.20 33 3.62 Changed RNA pol II promoter Fmp27 protein domain
Fmp27_WPPW PF10359 Domain 97 622 453.70 27 17.59 Changed RNA pol II promoter Fmp27 protein domain
FmrO PF07091 Family 3 61 236.80 26 87.72 Changed Ribosomal RNA methyltransferase (FmrO)
fn1 PF00039 Domain 74 3096 38.20 41 16.05 Changed Fibronectin type I domain
fn2 PF00040 Domain 331 2838 41.50 48 5.30 Changed Fibronectin type II domain
fn3 PF00041 Domain 98 138558 84.90 20 21.86 Changed Fibronectin type III domain
Fn3-like PF14310 Family 729 14887 71.00 30 8.97 Changed Fibronectin type III-like domain
fn3_2 PF16893 Domain 44 529 88.30 58 19.45 Changed Fibronectin type III domain
fn3_3 PF14686 Domain 170 1702 75.70 31 12.78 Changed Polysaccharide lyase family 4, domain II
fn3_4 PF16794 Domain 27 360 100.30 48 11.68 Changed Fibronectin-III type domain
fn3_5 PF06280 Domain 27 1515 116.10 22 11.00 Changed Fn3-like domain
fn3_6 PF17766 Domain 193 5862 97.70 34 13.51 New Fibronectin type-III domain
FN3_7 PF18447 Domain 19 109 93.90 51 20.11 New Fibronectin type III domain
Fn3_assoc PF13287 Repeat 34 1548 63.80 25 8.00 Changed Fn3 associated
fn3_PAP PF17808 Domain 5 676 115.80 44 18.93 New Fn3-like domain from Purple Acid Phosphatase
FNIP PF05725 Repeat 34 6432 42.70 32 39.28 Changed FNIP Repeat
FNIP_C PF14638 Family 24 521 181.40 45 17.78 Changed Folliculin-interacting protein C-terminus
FNIP_M PF14637 Family 24 534 219.30 46 21.40 Changed Folliculin-interacting protein middle domain
FNIP_N PF14636 Family 55 721 115.20 31 10.56 Changed Folliculin-interacting protein N-terminus
Fn_bind PF02986 Motif 33 40 37.30 35 14.03 Changed Fibronectin binding repeat
Foamy_BEL PF03274 Family 2 9 147.40 27 50.96 Changed Foamy virus BEL 1/2 protein
Foamy_virus_ENV PF03408 Family 1 10 981.00 50 99.47 Changed Foamy virus envelope protein
Focadhesin PF11229 Family 15 199 424.00 39 32.79 Changed Focadhesin
Focal_AT PF03623 Domain 25 732 121.60 54 13.33 Changed Focal adhesion targeting region
FOG_N PF15888 Domain 11 67 112.40 30 15.83 Changed Folded gastrulation N-terminus
Foie-gras_1 PF11817 Family 18 1307 219.00 20 21.65 Changed Foie gras liver health family 1
FokI_C PF02980 Domain 6 34 136.00 43 23.48 Changed Restriction endonuclease FokI, catalytic domain
FokI_N PF02981 Domain 5 32 137.80 38 23.66 Changed Restriction endonuclease FokI, recognition domain
Folate_carrier PF01770 Family 21 1179 285.30 30 82.29 Changed Reduced folate carrier
Folate_rec PF03024 Domain 34 1071 158.10 24 41.09 Changed Folate receptor family
FolB PF02152 Domain 930 7547 110.60 26 64.74 Changed Dihydroneopterin aldolase
Folliculin PF11704 Family 94 854 180.10 25 33.42 Changed Vesicle coat protein involved in Golgi to plasma membrane transport
Folliculin_C PF16692 Domain 14 287 205.90 32 38.73 Changed Folliculin C-terminal domain
FOLN PF09289 Domain 27 663 21.90 51 6.38 Changed Follistatin/Osteonectin-like EGF domain
FOP_dimer PF09398 Domain 4 523 75.40 37 25.54 Changed FOP N terminal dimerisation domain
FoP_duplication PF13865 Family 50 1822 71.90 24 27.82 Changed C-terminal duplication domain of Friend of PRMT1
Forkhead PF00250 Domain 335 10419 83.60 43 16.71 Changed Forkhead domain
Forkhead_N PF08430 Family 29 368 131.70 30 29.66 Changed Forkhead N-terminal region
Form-deh_trans PF09163 Domain 56 632 43.70 45 14.38 Changed Formate dehydrogenase N, transmembrane
Formin_GBD_N PF18382 Domain 24 475 86.80 46 7.09 New Formin N-terminal GTPase-binding domain
Formyl_trans_C PF02911 Domain 75 10147 99.20 26 27.18 Changed Formyl transferase, C-terminal domain
Formyl_trans_N PF00551 Domain 13 25486 174.20 25 55.35 Changed Formyl transferase
Form_Nir_trans PF01226 Family 571 4528 241.30 25 82.92 Changed Formate/nitrite transporter
Fox-1_C PF12414 Family 12 663 91.80 70 25.13 Changed Calcitonin gene-related peptide regulator C terminal
FOXO-TAD PF16676 Domain 24 466 41.50 55 7.47 Changed Transactivation domain of FOXO protein family
FOXO_KIX_bdg PF16675 Family 20 327 79.30 40 13.94 Changed KIX-binding domain of forkhead box O, CR2
FOXP-CC PF16159 Domain 33 937 68.10 69 11.17 Changed FOXP coiled-coil domain
FPL PF09758 Family 38 897 136.00 48 15.68 Changed Uncharacterised conserved protein
FPN1 PF06963 Family 16 1451 348.30 25 80.11 Changed Ferroportin1 (FPN1)
FpoO PF10621 Family 6 29 100.90 46 91.95 Changed F420H2 dehydrogenase subunit FpoO
FPP PF05911 Coiled-coil 30 2025 262.30 18 71.63 Changed Filament-like plant protein, long coiled-coil
FPRL1_inhibitor PF16104 Family 1 1 105.00 100 78.95 Changed Formyl peptide receptor-like 1 inhibitory protein
FPV060 PF17614 Family 1 5 193.80 30 93.08 Changed Viral CC-type chemokine
FR47 PF08445 Family 9 3421 82.30 22 31.15 Changed FR47-like protein
Fra10Ac1 PF09725 Family 69 662 115.50 50 38.76 Changed Folate-sensitive fragile site protein Fra10Ac1
Frag1 PF10277 Family 65 2973 205.10 18 52.22 Changed Frag1/DRAM/Sfk1 family
fragilysinNterm PF16376 Domain 2 0 0.00 0 0.00 Changed N-terminal domain of fragilysin
FragX_IP PF05994 Family 34 1088 563.50 42 65.96 Changed Cytoplasmic Fragile-X interacting family
Frankia_peptide PF14407 Family 8 17 60.70 36 81.45 Changed Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Frataxin_Cyay PF01491 Domain 265 2086 105.90 31 69.53 Changed Frataxin-like domain
FRB_dom PF08771 Domain 96 1344 98.00 54 4.34 Changed FKBP12-rapamycin binding domain
FRD2 PF03197 Family 1 16 98.30 37 82.14 Changed Bacteriophage FRD2 protein
FRG PF08867 Domain 66 816 95.80 28 30.39 Changed FRG domain
FRG1 PF06229 Domain 10 910 172.90 31 55.13 Changed FRG1-like domain
FRG2 PF15315 Family 9 57 160.70 57 61.36 Changed Facioscapulohumeral muscular dystrophy candidate 2
FrhB_FdhB_C PF04432 Domain 204 1771 159.20 21 37.95 Changed Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
FrhB_FdhB_N PF04422 Family 200 1584 76.20 24 18.14 Changed Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
Frigida PF07899 Family 55 1290 236.50 26 46.41 Changed Frigida-like protein
Fringe PF02434 Family 27 3226 177.40 19 46.59 Changed Fringe-like
Frizzled PF01534 Family 101 2547 270.00 34 49.23 Changed Frizzled/Smoothened family membrane region
FRP PF18032 Domain 9 97 98.70 44 90.45 New Photoprotection regulator fluorescence recovery protein
FrpC PF06901 Family 3 4 263.50 97 100.00 Changed RTX iron-regulated protein FrpC
FRQ PF09421 Family 14 289 641.80 28 87.64 Changed Frequency clock protein
Frtz PF11768 Family 5 307 429.20 38 67.03 Changed WD repeat-containing and planar cell polarity effector protein Fritz
Fructosamin_kin PF03881 Family 26 3777 263.70 26 87.13 Changed Fructosamine kinase
FSAP_sig_propep PF03032 Family 18 19 39.70 26 24.38 Changed Frog skin active peptide family signal and propeptide
FSA_C PF10479 Family 2 854 314.60 26 13.73 Changed Fragile site-associated protein C-terminus
FSH1 PF03959 Domain 46 3732 207.80 21 69.43 Changed Serine hydrolase (FSH1)
FSIP1 PF15554 Family 15 178 265.40 27 67.84 Changed FSIP1 family
FSIP2 PF15783 Family 18 274 481.50 26 37.88 Changed Fibrous sheath-interacting protein 2
Fst_toxin PF13955 Domain 7 5 21.00 53 54.69 Changed Toxin Fst, type I toxin-antitoxin system
FTA2 PF13095 Family 45 290 185.10 24 60.80 Changed Kinetochore Sim4 complex subunit FTA2
FTA4 PF13093 Family 60 336 199.80 33 72.69 Changed Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
FTCD PF02971 Domain 41 887 130.90 41 32.63 Changed Formiminotransferase domain
FTCD_C PF04961 Family 284 1655 175.50 31 61.93 Changed Formiminotransferase-cyclodeaminase
FTCD_N PF07837 Domain 172 1237 169.20 39 46.17 Changed Formiminotransferase domain, N-terminal subdomain
FTH PF01827 Domain 77 2300 138.00 16 38.75 Changed FTH domain
FTHFS PF01268 Family 477 4962 529.20 50 87.29 Changed Formate--tetrahydrofolate ligase
FTO_CTD PF12934 Domain 8 246 120.10 49 30.69 Changed FTO C-terminal domain
FTO_NTD PF12933 Domain 18 222 265.10 56 61.08 Changed FTO catalytic domain
FTP PF07504 Motif 162 3081 48.80 26 6.94 Changed Fungalysin/Thermolysin Propeptide Motif
FTR PF01913 Domain 63 412 144.60 47 47.95 Changed Formylmethanofuran-tetrahydromethanopterin formyltransferase
FTR1 PF03239 Family 13 4189 232.60 21 71.04 Changed Iron permease FTR1 family
FTR_C PF02741 Domain 71 415 149.00 49 49.62 Changed FTR, proximal lobe
FtsA PF14450 Domain 514 9029 174.60 21 55.73 Changed Cell division protein FtsA
FtsH_ext PF06480 Family 157 7836 99.40 16 14.87 Changed FtsH Extracellular
FtsJ PF01728 Family 231 13386 182.70 24 49.25 Changed FtsJ-like methyltransferase
FtsK_4TM PF13491 Domain 60 5327 160.30 19 19.22 Changed 4TM region of DNA translocase FtsK/SpoIIIE
FtsK_alpha PF17854 Domain 89 8258 100.20 41 12.00 New FtsK alpha domain
FtsK_gamma PF09397 Domain 491 8317 62.70 44 7.66 Changed Ftsk gamma domain
FtsK_SpoIIIE PF01580 Domain 16 19079 173.00 25 27.69 Changed FtsK/SpoIIIE family
FtsK_SpoIIIE_N PF12538 Family 11 99 113.10 20 7.90 Changed DNA transporter
FtsL PF04999 Coiled-coil 39 1825 91.10 26 82.41 Changed Cell division protein FtsL
FtsQ PF03799 Family 379 4574 117.90 17 42.11 Changed Cell division protein FtsQ
FTSW_RODA_SPOVE PF01098 Family 14 18774 337.20 27 88.33 Changed Cell cycle protein
FtsX PF02687 Family 95 54582 95.70 20 20.03 Changed FtsX-like permease family
FtsX_ECD PF18075 Domain 555 5673 96.40 21 32.09 New FtsX extracellular domain
FtsZ_C PF12327 Domain 22 9201 95.30 45 22.52 Changed FtsZ family, C-terminal domain
FTZ PF03867 Family 6 25 264.50 36 57.50 Changed Fushi tarazu (FTZ), N-terminal region
Fucokinase PF07959 Family 53 646 329.50 23 41.81 Changed L-fucokinase
Fucose_iso_C PF02952 Domain 26 1434 139.70 25 27.25 Changed L-fucose isomerase, C-terminal domain
Fucose_iso_N1 PF07881 Family 48 602 164.60 54 29.27 Changed L-fucose isomerase, first N-terminal domain
Fucose_iso_N2 PF07882 Family 55 605 165.80 51 29.93 Changed L-fucose isomerase, second N-terminal domain
Fucosidase_C PF16757 Domain 53 1410 86.60 24 17.20 Changed Alpha-L-fucosidase C-terminal domain
FucT_N PF18025 Domain 14 123 93.20 29 28.72 New Alpha-(1,3)-fucosyltransferase FucT N-terminal domain
FumaraseC_C PF10415 Domain 737 9363 54.30 42 11.59 Changed Fumarase C C-terminus
Fumarate_red_C PF02300 Domain 40 362 124.80 41 96.00 Changed Fumarate reductase subunit C
Fumarate_red_D PF02313 Domain 36 365 111.10 46 93.75 Changed Fumarate reductase subunit D
Fumble PF03630 Family 121 2614 290.70 34 64.05 Changed Fumble
Fumerase PF05681 Family 424 4716 272.10 37 61.18 Changed Fumarate hydratase (Fumerase)
Fumerase_C PF05683 Family 132 4729 194.00 40 46.99 Changed Fumarase C-terminus
FUN14 PF04930 Family 134 1232 94.20 26 51.48 Changed FUN14 family
Fungal_KA1 PF16797 Domain 76 400 122.20 35 10.28 Changed Fungal kinase associated-1 domain
Fungal_lectin PF07938 Domain 4 346 208.80 16 57.83 Changed Fungal fucose-specific lectin
Fungal_lectin_2 PF18647 Domain 36 191 97.20 32 15.01 New Alpha-galactosyl-binding fungal lectin
Fungal_TACC PF12709 Family 19 344 68.60 45 9.15 Changed Fungal Transforming acidic coiled-coil (TACC) proteins
Fungal_trans PF04082 Domain 71 53326 232.40 13 30.98 Changed Fungal specific transcription factor domain
Fungal_trans_2 PF11951 Family 82 20795 279.70 11 51.14 Changed Fungal specific transcription factor domain
Fungus-induced PF10917 Family 13 43 44.40 51 40.24 Changed Fungus-induced protein
Fun_ATP-synt_8 PF05933 Family 7 98 47.70 54 52.78 Changed Fungal ATP synthase protein 8 (A6L)
FUR PF01475 Family 24 17233 118.30 24 80.73 Changed Ferric uptake regulator family
Furin-like PF00757 Domain 40 1643 154.10 33 12.94 Changed Furin-like cysteine rich region
Furin-like_2 PF15913 Domain 16 745 94.90 40 18.88 Changed Furin-like repeat, cysteine-rich
Fur_reg_FbpA PF13076 Family 18 216 35.50 36 58.51 Changed Fur-regulated basic protein A
Fur_reg_FbpB PF13040 Family 29 244 39.00 39 82.56 Changed Fur-regulated basic protein B
FUSC PF04632 Family 69 2554 517.70 17 87.68 Changed Fusaric acid resistance protein family
FUSC-like PF12805 Domain 48 1732 254.20 20 36.21 Changed FUSC-like inner membrane protein yccS
FUSC_2 PF13515 Family 192 7687 133.90 18 19.90 Changed Fusaric acid resistance protein-like
Fuseless PF15993 Family 18 248 199.10 26 67.62 Changed Fuseless
Fusion_F0 PF13044 Family 1 1 436.00 100 98.20 Changed Fusion glycoprotein F0, Isavirus
Fusion_gly PF00523 Family 9 61 482.10 27 85.64 Changed Fusion glycoprotein F0
Fusion_gly_K PF01621 Family 4 29 328.30 31 97.65 Changed Cell fusion glycoprotein K
Fve PF09259 Domain 2 17 94.30 39 57.11 Changed Fungal immunomodulatory protein Fve
FWWh PF14922 Family 31 255 135.30 29 27.46 Changed Protein of unknown function
FXa_inhibition PF14670 Domain 147 14383 36.80 42 5.49 Changed Coagulation Factor Xa inhibitory site
FXMRP1_C_core PF12235 Family 27 702 105.30 51 19.38 Changed Fragile X-related 1 protein core C terminal
FXMR_C2 PF16098 Family 6 191 71.10 71 13.27 Changed Fragile X-related mental retardation protein C-terminal region 2
FXR_C1 PF16096 Family 9 302 75.70 74 12.00 Changed Fragile X-related 1 protein C-terminal region 2
FXR_C3 PF16097 Family 12 172 66.10 61 10.61 Changed Fragile X-related 1 protein C-terminal region 3
FxsA PF04186 Family 236 2916 109.50 31 66.90 Changed FxsA cytoplasmic membrane protein
FYDLN_acid PF09538 Family 72 992 114.20 33 94.84 Changed Protein of unknown function (FYDLN_acid)
FYRC PF05965 Family 132 1998 82.10 27 4.02 Changed F/Y rich C-terminus
FYRN PF05964 Family 155 1951 49.80 33 2.40 Changed F/Y-rich N-terminus
FYTT PF07078 Family 4 296 189.90 31 80.89 Changed Forty-two-three protein
FYVE PF01363 Domain 139 14726 71.30 32 8.01 Changed FYVE zinc finger
FYVE_2 PF02318 Family 18 1896 107.40 28 12.89 Changed FYVE-type zinc finger
Fz PF01392 Domain 339 4329 108.10 31 18.67 Changed Fz domain
Fzo_mitofusin PF04799 Family 30 510 155.80 46 21.51 Changed fzo-like conserved region
F_actin_bind PF08919 Domain 27 519 106.10 40 9.19 Changed F-actin binding
F_actin_bund_C PF18060 Domain 14 53 88.00 36 27.95 New F actin bundling C terminal
F_actin_cap_B PF01115 Family 96 1204 221.70 53 80.53 Changed F-actin capping protein, beta subunit
F_bP_aldolase PF01116 Domain 860 10757 300.50 32 91.01 Changed Fructose-bisphosphate aldolase class-II
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z