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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
1-cysPrx_C PF10417 Domain 46 2680 36.80 33 17.01 Changed C-terminal domain of 1-Cys peroxiredoxin
120_Rick_ant PF12574 Family 3 2 244.50 21 27.46 Changed 120 KDa Rickettsia surface antigen
12TM_1 PF09847 Family 7 26 429.50 16 87.46 Changed Membrane protein of 12 TMs
14-3-3 PF00244 Domain 174 1973 194.50 56 76.39 Changed 14-3-3 protein
17kDa_Anti_2 PF16998 Family 8 119 105.80 24 68.09 Changed 17 kDa outer membrane surface antigen
2-Hacid_dh PF00389 Domain 89 7853 306.40 17 81.56 Changed D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C PF02826 Domain 145 9588 171.30 29 47.44 Changed D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-oxoacid_dh PF00198 Domain 76 4549 221.50 32 46.05 Changed 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
2-oxogl_dehyd_N PF16078 Family 252 1272 40.00 36 4.03 Changed 2-oxoglutarate dehydrogenase N-terminus
2-ph_phosp PF04029 Family 143 351 221.60 27 90.33 Changed 2-phosphosulpholactate phosphatase
23ISL PF16620 Disordered 19 46 161.90 52 8.85 Changed Unstructured linker between I-set domains 2 and 3 on MYLCK
23S_rRNA_IVP PF05635 Family 414 859 101.90 24 82.25 Changed 23S rRNA-intervening sequence protein
2CSK_N PF08521 Family 202 593 141.30 20 30.00 Changed Two-component sensor kinase N-terminal
2C_adapt PF08793 Domain 18 23 34.10 32 12.69 Changed 2-cysteine adaptor domain
2Fe-2S_Ferredox PF11591 Family 2 3 33.30 75 26.18 Changed Ferredoxin chloroplastic transit peptide
2Fe-2S_thioredx PF01257 Family 139 2560 128.10 28 48.16 Changed Thioredoxin-like [2Fe-2S] ferredoxin
2H-phosphodiest PF08975 Domain 16 63 110.10 24 44.26 Changed Domain of unknown function (DUF1868)
2HCT PF03390 Family 78 175 398.70 35 92.30 Changed 2-hydroxycarboxylate transporter family
2OG-FeII_Oxy PF03171 Domain 136 6821 103.90 31 30.50 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_2 PF13532 Domain 43 2555 194.10 18 53.10 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_3 PF13640 Domain 389 3780 104.10 24 26.79 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_4 PF13661 Domain 16 338 104.70 42 18.29 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_5 PF13759 Domain 37 138 100.30 27 25.66 Changed Putative 2OG-Fe(II) oxygenase
2OG-Fe_Oxy_2 PF10014 Domain 116 185 188.50 28 74.32 Changed 2OG-Fe dioxygenase
2TM PF13239 Family 165 334 78.30 23 48.74 Changed 2TM domain
2_5_RNA_ligase2 PF13563 Family 98 1077 153.60 16 56.26 Changed 2'-5' RNA ligase superfamily
3-alpha PF03475 Domain 100 233 43.40 24 13.73 Changed 3-alpha domain
3-dmu-9_3-mt PF06983 Family 20 990 124.10 28 83.05 Changed 3-demethylubiquinone-9 3-methyltransferase
3-HAO PF06052 Domain 4 385 145.00 45 72.79 Changed 3-hydroxyanthranilic acid dioxygenase
3-PAP PF12578 Family 25 208 121.80 29 17.32 Changed Myotubularin-associated protein
3A PF00803 Family 8 10 226.60 17 57.69 Changed 3A/RNA2 movement protein family
3Beta_HSD PF01073 Family 9 1671 232.50 23 65.01 Changed 3-beta hydroxysteroid dehydrogenase/isomerase family
3D PF06725 Domain 41 973 69.10 36 19.89 Changed 3D domain
3H PF02829 Family 223 295 97.30 36 52.37 Changed 3H domain
3HBOH PF10605 Family 17 57 512.70 35 81.91 Changed 3HB-oligomer hydrolase (3HBOH)
3HCDH PF00725 Domain 69 4899 94.40 28 23.38 Changed 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3HCDH_N PF02737 Domain 60 4207 177.40 31 37.23 Changed 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
40S_S4_C PF16121 Family 84 626 47.00 62 17.17 Changed 40S ribosomal protein S4 C-terminus
40S_SA_C PF16122 Family 23 459 88.70 43 30.43 Changed 40S ribosomal protein SA C-terminus
4F5 PF04419 Family 37 654 36.70 34 44.40 Changed 4F5 protein family
4HBT PF03061 Domain 133 8196 78.90 17 45.35 Changed Thioesterase superfamily
4HBT_2 PF13279 Domain 75 2172 127.40 17 68.80 Changed Thioesterase-like superfamily
4HBT_3 PF13622 Domain 265 1765 254.40 21 82.45 Changed Thioesterase-like superfamily
4HB_MCP_1 PF12729 Family 46 1976 176.80 13 30.15 Changed Four helix bundle sensory module for signal transduction
4_1_CTD PF05902 Domain 16 470 104.40 59 11.04 Changed 4.1 protein C-terminal domain (CTD)
5-FTHF_cyc-lig PF01812 Family 18 2078 180.10 23 82.73 Changed 5-formyltetrahydrofolate cyclo-ligase family
5-nucleotidase PF06189 Family 99 311 256.90 48 72.62 Changed 5'-nucleotidase
53-BP1_Tudor PF09038 Domain 2 86 119.90 65 7.23 Changed Tumour suppressor p53-binding protein-1 Tudor
5HT_transport_N PF03491 Family 10 50 40.30 64 6.70 Changed Serotonin (5-HT) neurotransmitter transporter, N-terminus
5TM-5TMR_LYT PF07694 Domain 71 501 168.10 21 30.14 Changed 5TMR of 5TMR-LYT
5_3_exonuc PF01367 Domain 960 2005 97.00 35 12.72 Changed 5'-3' exonuclease, C-terminal SAM fold
5_3_exonuc_N PF02739 Domain 905 2036 167.10 34 22.15 Changed 5'-3' exonuclease, N-terminal resolvase-like domain
5_nucleotid PF05761 Family 115 811 370.90 31 81.16 Changed 5' nucleotidase family
5_nucleotid_C PF02872 Domain 63 2381 166.00 21 27.70 Changed 5'-nucleotidase, C-terminal domain
60KD_IMP PF02096 Family 570 2713 203.50 24 47.28 Changed 60Kd inner membrane protein
6PF2K PF01591 Domain 11 1423 194.60 37 40.46 Changed 6-phosphofructo-2-kinase
6PGD PF00393 Domain 411 1822 233.70 41 56.25 Changed 6-phosphogluconate dehydrogenase, C-terminal domain
7kD_coat PF02495 Family 61 6 58.80 23 35.12 Changed 7kD viral coat protein
7kD_DNA_binding PF02294 Domain 3 9 58.10 88 92.08 Changed 7kD DNA-binding domain
7TM-7TMR_HD PF07698 Domain 72 445 192.10 19 26.97 Changed 7TM receptor with intracellular HD hydrolase
7TMR-DISMED2 PF07696 Domain 244 483 132.90 17 18.14 Changed 7TMR-DISM extracellular 2
7TMR-DISM_7TM PF07695 Domain 176 743 202.50 15 28.35 Changed 7TM diverse intracellular signalling
7TMR-HDED PF07697 Domain 224 417 229.20 17 31.51 Changed 7TM-HD extracellular
7tm_1 PF00001 Family 64 28505 254.60 19 68.40 Changed 7 transmembrane receptor (rhodopsin family)
7tm_2 PF00002 Family 29 5258 225.70 21 27.72 Changed 7 transmembrane receptor (Secretin family)
7tm_3 PF00003 Family 817 4289 230.80 28 30.43 Changed 7 transmembrane sweet-taste receptor of 3 GCPR
7tm_4 PF13853 Family 5 27359 266.20 37 88.05 Changed Olfactory receptor
7tm_6 PF02949 Family 36 2743 248.60 14 73.65 Changed 7tm Odorant receptor
7tm_7 PF08395 Family 76 1367 322.90 12 88.08 Changed 7tm Chemosensory receptor
7TM_GPCR_Sra PF02117 Family 10 151 269.30 21 92.07 Changed Serpentine type 7TM GPCR chemoreceptor Sra
7TM_GPCR_Srab PF10292 Family 17 256 243.30 17 86.32 Changed Serpentine type 7TM GPCR receptor class ab chemoreceptor
7TM_GPCR_Srb PF02175 Family 3 70 188.50 33 66.20 Changed Serpentine type 7TM GPCR chemoreceptor Srb
7TM_GPCR_Srbc PF10316 Family 61 309 212.40 22 85.92 Changed Serpentine type 7TM GPCR chemoreceptor Srbc
7TM_GPCR_Srd PF10317 Family 56 503 201.30 18 80.80 Changed Serpentine type 7TM GPCR chemoreceptor Srd
7TM_GPCR_Srh PF10318 Family 177 1063 241.40 20 84.46 Changed Serpentine type 7TM GPCR chemoreceptor Srh
7TM_GPCR_Sri PF10327 Family 51 357 220.60 22 81.75 Changed Serpentine type 7TM GPCR chemoreceptor Sri
7TM_GPCR_Srj PF10319 Family 35 208 220.40 31 86.92 Changed Serpentine type 7TM GPCR chemoreceptor Srj
7TM_GPCR_Srsx PF10320 Family 23 342 193.60 16 73.46 Changed Serpentine type 7TM GPCR chemoreceptor Srsx
7TM_GPCR_Srt PF10321 Family 39 417 228.40 24 87.17 Changed Serpentine type 7TM GPCR chemoreceptor Srt
7TM_GPCR_Sru PF10322 Family 111 298 225.50 26 90.65 Changed Serpentine type 7TM GPCR chemoreceptor Sru
7TM_GPCR_Srv PF10323 Family 25 269 204.70 17 83.08 Changed Serpentine type 7TM GPCR chemoreceptor Srv
7TM_GPCR_Srw PF10324 Family 89 1179 230.20 17 73.07 Changed Serpentine type 7TM GPCR chemoreceptor Srw
7TM_GPCR_Srx PF10328 Family 76 753 208.50 16 78.04 Changed Serpentine type 7TM GPCR chemoreceptor Srx
7TM_GPCR_Srz PF10325 Family 58 369 209.00 21 75.90 Changed Serpentine type 7TM GPCR chemoreceptor Srz
7TM_GPCR_Str PF10326 Family 170 1489 222.30 20 81.54 Changed Serpentine type 7TM GPCR chemoreceptor Str
7TM_transglut PF14402 Family 50 99 311.30 46 61.62 Changed 7 transmembrane helices usually fused to an inactive transglutaminase
8TM_micro PF17028 Family 7 8 260.50 22 92.83 Changed 8TM Microsporidial transmembrane domain
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z