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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
1-cysPrx_C PF10417 Domain 84 20884 33.70 46 16.62 Changed C-terminal domain of 1-Cys peroxiredoxin
120_Rick_ant PF12574 Family 3 142 211.80 78 27.68 Changed 120 KDa Rickettsia surface antigen
12TM_1 PF09847 Family 7 81 394.20 19 87.03 Changed Membrane protein of 12 TMs
14-3-3 PF00244 Domain 194 3581 198.80 56 82.49 Changed 14-3-3 protein
17kDa_Anti_2 PF16998 Family 8 886 104.80 32 75.87 New 17 kDa outer membrane surface antigen
2-Hacid_dh PF00389 Domain 89 82484 309.70 18 85.92 Changed D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C PF02826 Domain 145 96268 171.30 30 48.24 Changed D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-oxoacid_dh PF00198 Domain 78 48007 223.40 36 47.16 Changed 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
2-oxogl_dehyd_N PF16078 Family 254 9982 40.50 45 4.06 New 2-oxoglutarate dehydrogenase N-terminus
2-ph_phosp PF04029 Family 143 967 216.50 26 90.62 Changed 2-phosphosulpholactate phosphatase
23ISL PF16620 Disordered 19 48 162.40 51 8.82 New Unstructured linker between I-set domains 2 and 3 on MYLCK
23S_rRNA_IVP PF05635 Family 417 2902 101.10 25 78.30 Changed 23S rRNA-intervening sequence protein
2CSK_N PF08521 Family 205 7485 141.30 28 30.87 Changed Two-component sensor kinase N-terminal
2C_adapt PF08793 Domain 18 162 35.00 39 17.01 Changed 2-cysteine adaptor domain
2Fe-2S_Ferredox PF11591 Family 2 6 33.00 80 25.98 Changed Ferredoxin chloroplastic transit peptide
2Fe-2S_thioredx PF01257 Family 143 14354 135.70 33 59.11 Changed Thioredoxin-like [2Fe-2S] ferredoxin
2H-phosphodiest PF08975 Domain 16 487 113.40 53 49.09 Changed Domain of unknown function (DUF1868)
2HCT PF03390 Family 79 3720 403.20 44 93.01 Changed 2-hydroxycarboxylate transporter family
2OG-FeII_Oxy PF03171 Domain 138 15040 103.60 30 31.00 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_2 PF13532 Domain 43 11142 179.90 30 65.91 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_3 PF13640 Domain 170 10944 97.50 28 34.76 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_4 PF13661 Domain 38 357 68.10 20 22.05 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_5 PF13759 Domain 37 560 99.00 26 34.05 Changed Putative 2OG-Fe(II) oxygenase
2OG-Fe_Oxy_2 PF10014 Domain 117 1043 189.50 29 79.27 Changed 2OG-Fe dioxygenase
2TM PF13239 Family 167 1297 77.50 28 52.48 Changed 2TM domain
2_5_RNA_ligase2 PF13563 Family 98 10745 150.40 29 78.53 Changed 2'-5' RNA ligase superfamily
3-alpha PF03475 Domain 104 9024 43.50 45 19.09 Changed 3-alpha domain
3-dmu-9_3-mt PF06983 Family 20 18782 130.40 31 91.10 Changed 3-demethylubiquinone-9 3-methyltransferase
3-HAO PF06052 Domain 4 1064 122.80 37 74.77 Changed 3-hydroxyanthranilic acid dioxygenase
3-PAP PF12578 Family 25 266 119.80 27 17.28 Changed Myotubularin-associated protein
3A PF00803 Family 8 991 202.10 44 79.92 Changed 3A/RNA2 movement protein family
3Beta_HSD PF01073 Family 9 9255 238.20 37 69.56 Changed 3-beta hydroxysteroid dehydrogenase/isomerase family
3D PF06725 Domain 41 10118 71.20 44 20.45 Changed 3D domain
3H PF02829 Family 223 2980 97.00 43 55.69 Changed 3H domain
3HBOH PF10605 Family 17 243 559.00 44 88.90 Changed 3HB-oligomer hydrolase (3HBOH)
3HCDH PF00725 Domain 69 48537 94.70 27 22.71 Changed 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3HCDH_N PF02737 Domain 60 37336 177.00 36 32.58 Changed 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
40S_S4_C PF16121 Family 86 1069 46.80 62 18.14 New 40S ribosomal protein S4 C-terminus
40S_SA_C PF16122 Family 23 658 89.60 43 30.20 New 40S ribosomal protein SA C-terminus
4F5 PF04419 Family 39 982 36.60 33 45.22 Changed 4F5 protein family
4HBT PF03061 Domain 133 88944 79.20 17 46.31 Changed Thioesterase superfamily
4HBT_2 PF13279 Domain 75 24932 122.30 21 80.27 Changed Thioesterase-like superfamily
4HBT_3 PF13622 Domain 200 9133 250.00 23 87.14 Changed Thioesterase-like superfamily
4HB_MCP_1 PF12729 Family 46 11495 177.10 14 31.22 Changed Four helix bundle sensory module for signal transduction
4_1_CTD PF05902 Domain 16 607 103.50 60 11.72 Changed 4.1 protein C-terminal domain (CTD)
5-FTHF_cyc-lig PF01812 Family 18 19491 176.30 30 89.64 Changed 5-formyltetrahydrofolate cyclo-ligase family
5-nucleotidase PF06189 Family 99 890 256.00 46 79.71 Changed 5'-nucleotidase
53-BP1_Tudor PF09038 Domain 2 118 116.90 67 7.55 Changed Tumour suppressor p53-binding protein-1 Tudor
5HT_transport_N PF03491 Family 10 78 40.30 68 7.80 Changed Serotonin (5-HT) neurotransmitter transporter, N-terminus
5TM-5TMR_LYT PF07694 Domain 71 17688 170.80 33 33.60 Changed 5TMR of 5TMR-LYT
5_3_exonuc PF01367 Domain 972 29852 97.80 39 14.62 Changed 5'-3' exonuclease, C-terminal SAM fold
5_3_exonuc_N PF02739 Domain 919 30416 164.20 37 24.88 Changed 5'-3' exonuclease, N-terminal resolvase-like domain
5_nucleotid PF05761 Family 116 1172 358.70 30 81.35 Changed 5' nucleotidase family
5_nucleotid_C PF02872 Domain 63 39906 165.90 23 29.43 Changed 5'-nucleotidase, C-terminal domain
60KD_IMP PF02096 Family 570 23410 194.10 34 48.19 Changed 60Kd inner membrane protein
6PF2K PF01591 Domain 11 2087 192.50 35 39.92 Changed 6-phosphofructo-2-kinase
6PGD PF00393 Domain 416 22613 226.40 47 58.26 Changed 6-phosphogluconate dehydrogenase, C-terminal domain
7kD_coat PF02495 Family 61 494 59.00 26 67.29 Changed 7kD viral coat protein
7kD_DNA_binding PF02294 Domain 3 44 57.80 89 91.91 Changed 7kD DNA-binding domain
7TM-7TMR_HD PF07698 Domain 72 2409 194.90 23 27.46 Changed 7TM receptor with intracellular HD hydrolase
7TMR-DISMED2 PF07696 Domain 254 3697 132.80 20 17.62 Changed 7TMR-DISM extracellular 2
7TMR-DISM_7TM PF07695 Domain 179 5975 201.00 16 27.62 Changed 7TM diverse intracellular signalling
7TMR-HDED PF07697 Domain 224 2329 227.40 22 32.00 Changed 7TM-HD extracellular
7tm_1 PF00001 Family 64 58080 229.40 18 73.19 Changed 7 transmembrane receptor (rhodopsin family)
7tm_2 PF00002 Family 29 6573 222.70 21 29.17 Changed 7 transmembrane receptor (Secretin family)
7tm_3 PF00003 Family 829 5198 226.10 26 31.49 Changed 7 transmembrane sweet-taste receptor of 3 GCPR
7tm_4 PF13853 Family 5 39130 254.30 36 89.75 Changed Olfactory receptor
7tm_6 PF02949 Family 36 5006 254.30 13 75.58 Changed 7tm Odorant receptor
7tm_7 PF08395 Family 76 1907 316.90 11 89.24 Changed 7tm Chemosensory receptor
7TM_GPCR_Sra PF02117 Family 10 166 262.70 19 91.74 Changed Serpentine type 7TM GPCR chemoreceptor Sra
7TM_GPCR_Srab PF10292 Family 17 374 242.00 16 87.66 Changed Serpentine type 7TM GPCR receptor class ab chemoreceptor
7TM_GPCR_Srb PF02175 Family 3 77 186.00 31 65.59 Changed Serpentine type 7TM GPCR chemoreceptor Srb
7TM_GPCR_Srbc PF10316 Family 61 334 212.50 21 84.79 Changed Serpentine type 7TM GPCR chemoreceptor Srbc
7TM_GPCR_Srd PF10317 Family 56 552 200.60 17 80.75 Changed Serpentine type 7TM GPCR chemoreceptor Srd
7TM_GPCR_Srh PF10318 Family 177 1161 236.50 20 83.71 Changed Serpentine type 7TM GPCR chemoreceptor Srh
7TM_GPCR_Sri PF10327 Family 51 364 218.80 22 81.83 Changed Serpentine type 7TM GPCR chemoreceptor Sri
7TM_GPCR_Srj PF10319 Family 35 207 221.00 32 87.18 Changed Serpentine type 7TM GPCR chemoreceptor Srj
7TM_GPCR_Srsx PF10320 Family 23 563 182.50 15 70.22 Changed Serpentine type 7TM GPCR chemoreceptor Srsx
7TM_GPCR_Srt PF10321 Family 39 556 219.30 21 86.43 Changed Serpentine type 7TM GPCR chemoreceptor Srt
7TM_GPCR_Sru PF10322 Family 111 308 225.70 25 90.66 Changed Serpentine type 7TM GPCR chemoreceptor Sru
7TM_GPCR_Srv PF10323 Family 25 415 201.00 15 80.07 Changed Serpentine type 7TM GPCR chemoreceptor Srv
7TM_GPCR_Srw PF10324 Family 89 1379 233.60 16 72.43 Changed Serpentine type 7TM GPCR chemoreceptor Srw
7TM_GPCR_Srx PF10328 Family 76 1023 198.50 15 77.32 Changed Serpentine type 7TM GPCR chemoreceptor Srx
7TM_GPCR_Srz PF10325 Family 58 374 208.10 21 75.79 Changed Serpentine type 7TM GPCR chemoreceptor Srz
7TM_GPCR_Str PF10326 Family 170 1588 220.50 20 81.84 Changed Serpentine type 7TM GPCR chemoreceptor Str
7TM_transglut PF14402 Family 50 926 304.50 53 61.53 Changed 7 transmembrane helices usually fused to an inactive transglutaminase
8TM_micro PF17028 Family 12 18 252.80 26 95.47 New 8TM Microsporidial transmembrane domain
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z