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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
1-cysPrx_C PF10417 Domain 46 5754 36.50 33 17.02 Changed C-terminal domain of 1-Cys peroxiredoxin
120_Rick_ant PF12574 Family 1 7 204.70 38 28.67 Changed 120 KDa Rickettsia surface antigen
12TM_1 PF09847 Family 7 41 440.50 17 86.82 Changed Membrane protein of 12 TMs
14-3-3 PF00244 Domain 171 3543 194.10 53 75.60 Changed 14-3-3 protein
17kDa_Anti_2 PF16998 Family 7 342 106.10 23 70.08 Changed 17 kDa outer membrane surface antigen
2-Hacid_dh PF00389 Domain 89 19205 305.70 17 82.66 Changed D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C PF02826 Domain 144 23448 171.70 29 48.10 Changed D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-oxoacid_dh PF00198 Domain 76 11630 222.00 33 46.32 Changed 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
2-oxogl_dehyd_N PF16078 Family 247 3069 40.00 35 4.04 Changed 2-oxoglutarate dehydrogenase N-terminus
2-ph_phosp PF04029 Family 141 862 215.20 27 90.19 Changed 2-phosphosulpholactate phosphatase
23ISL PF16620 Disordered 19 79 164.70 48 9.11 Changed Unstructured linker between I-set domains 2 and 3 on MYLCK
23S_rRNA_IVP PF05635 Family 411 2828 101.50 24 81.15 Changed 23S rRNA-intervening sequence protein
2CSK_N PF08521 Family 192 1704 141.10 19 30.14 Changed Two-component sensor kinase N-terminal
2C_adapt PF08793 Domain 18 23 34.10 32 12.69 Changed 2-cysteine adaptor domain
2Fe-2S_Ferredox PF11591 Family 2 3 33.30 75 26.18 Changed Ferredoxin chloroplastic transit peptide
2Fe-2S_thioredx PF01257 Family 139 6019 130.00 27 46.68 Changed Thioredoxin-like [2Fe-2S] ferredoxin
2H-phosphodiest PF08975 Domain 15 180 109.50 24 41.60 Changed Domain of unknown function (DUF1868)
2HCT PF03390 Family 77 367 387.50 36 92.81 Changed 2-hydroxycarboxylate transporter family
2OG-FeII_Oxy PF03171 Domain 135 14598 104.80 31 30.39 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_2 PF13532 Domain 41 5636 192.40 18 54.69 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_3 PF13640 Domain 381 7580 103.20 23 28.68 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_4 PF13661 Domain 16 755 104.30 39 19.22 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_5 PF13759 Domain 35 479 100.20 32 30.64 Changed Putative 2OG-Fe(II) oxygenase
2OG-Fe_Oxy_2 PF10014 Domain 115 482 190.70 29 76.11 Changed 2OG-Fe dioxygenase
2TM PF13239 Family 164 781 78.80 24 49.24 Changed 2TM domain
2_5_RNA_ligase2 PF13563 Family 95 3020 152.60 16 62.04 Changed 2'-5' RNA ligase superfamily
3-alpha PF03475 Domain 97 576 43.30 24 14.08 Changed 3-alpha domain
3-dmu-9_3-mt PF06983 Family 20 3011 124.10 28 83.00 Changed 3-demethylubiquinone-9 3-methyltransferase
3-HAO PF06052 Domain 4 905 143.50 44 74.61 Changed 3-hydroxyanthranilic acid dioxygenase
3-PAP PF12578 Family 25 314 118.90 29 17.20 Changed Myotubularin-associated protein
3A PF00803 Family 8 10 226.60 17 57.69 Changed 3A/RNA2 movement protein family
3Beta_HSD PF01073 Family 9 3254 231.90 23 63.44 Changed 3-beta hydroxysteroid dehydrogenase/isomerase family
3D PF06725 Domain 41 2503 69.00 36 20.44 Changed 3D domain
3H PF02829 Family 219 611 97.00 37 53.60 Changed 3H domain
3HBOH PF10605 Family 17 165 483.70 33 83.21 Changed 3HB-oligomer hydrolase (3HBOH)
3HCDH PF00725 Domain 68 13054 94.20 28 23.20 Changed 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3HCDH_N PF02737 Domain 60 11302 176.30 31 37.30 Changed 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
40S_S4_C PF16121 Family 83 1093 46.40 62 17.06 Changed 40S ribosomal protein S4 C-terminus
40S_SA_C PF16122 Family 23 689 88.70 38 29.54 Changed 40S ribosomal protein SA C-terminus
4F5 PF04419 Family 37 1224 36.50 32 42.67 Changed 4F5 protein family
4HBT PF03061 Domain 132 20870 79.10 17 47.10 Changed Thioesterase superfamily
4HBT_2 PF13279 Domain 74 5256 126.80 17 67.99 Changed Thioesterase-like superfamily
4HBT_3 PF13622 Domain 263 4788 252.20 22 82.93 Changed Thioesterase-like superfamily
4HB_MCP_1 PF12729 Family 46 4623 176.10 13 30.67 Changed Four helix bundle sensory module for signal transduction
4HFCP_synth PF04476 Family 61 216 220.30 36 85.78 Changed 4-HFC-P synthase
4_1_CTD PF05902 Domain 15 657 103.00 57 10.49 Changed 4.1 protein C-terminal domain (CTD)
5-FTHF_cyc-lig PF01812 Family 18 4925 178.20 24 84.29 Changed 5-formyltetrahydrofolate cyclo-ligase family
5-nucleotidase PF06189 Family 97 689 258.40 45 78.89 Changed 5'-nucleotidase
53-BP1_Tudor PF09038 Domain 2 128 118.20 59 7.50 Changed Tumour suppressor p53-binding protein-1 Tudor
5HT_transport_N PF03491 Family 10 88 37.40 58 6.07 Changed Serotonin (5-HT) neurotransmitter transporter, N-terminus
5TM-5TMR_LYT PF07694 Domain 71 1205 167.40 20 31.60 Changed 5TMR of 5TMR-LYT
5_3_exonuc PF01367 Domain 948 5337 97.00 34 13.08 Changed 5'-3' exonuclease, C-terminal SAM fold
5_3_exonuc_N PF02739 Domain 894 5418 166.40 35 22.73 Changed 5'-3' exonuclease, N-terminal resolvase-like domain
5_nucleotid PF05761 Family 114 1601 350.30 30 78.82 Changed 5' nucleotidase family
5_nucleotid_C PF02872 Domain 62 5844 166.70 21 27.65 Changed 5'-nucleotidase, C-terminal domain
60KD_IMP PF02096 Family 550 6584 200.40 25 47.59 Changed 60Kd inner membrane protein
6PF2K PF01591 Domain 11 2607 191.80 35 40.30 Changed 6-phosphofructo-2-kinase
6PGD PF00393 Domain 404 4604 225.30 40 55.87 Changed 6-phosphogluconate dehydrogenase, C-terminal domain
7kD_coat PF02495 Family 61 6 58.80 23 35.12 Changed 7kD viral coat protein
7kD_DNA_binding PF02294 Domain 3 11 55.10 88 92.66 Changed 7kD DNA-binding domain
7TM-7TMR_HD PF07698 Domain 71 980 191.90 19 27.14 Changed 7TM receptor with intracellular HD hydrolase
7TMR-DISMED2 PF07696 Domain 237 1184 132.30 17 18.31 Changed 7TMR-DISM extracellular 2
7TMR-DISM_7TM PF07695 Domain 176 1857 202.00 15 28.67 Changed 7TM diverse intracellular signalling
7TMR-HDED PF07697 Domain 219 938 227.40 17 31.71 Changed 7TM-HD extracellular
7tm_1 PF00001 Family 64 42500 254.10 18 68.86 Changed 7 transmembrane receptor (rhodopsin family)
7tm_2 PF00002 Family 29 7521 224.60 22 28.94 Changed 7 transmembrane receptor (Secretin family)
7tm_3 PF00003 Family 807 6021 228.20 26 30.04 Changed 7 transmembrane sweet-taste receptor of 3 GCPR
7tm_4 PF13853 Family 5 30867 262.60 37 87.99 Changed Olfactory receptor
7tm_6 PF02949 Family 36 4005 247.00 14 74.81 Changed 7tm Odorant receptor
7tm_7 PF08395 Family 76 1739 312.00 12 86.10 Changed 7tm Chemosensory receptor
7TM_GPCR_Sra PF02117 Family 10 182 255.30 18 91.53 Changed Serpentine type 7TM GPCR chemoreceptor Sra
7TM_GPCR_Srab PF10292 Family 17 663 223.30 15 82.36 Changed Serpentine type 7TM GPCR receptor class ab chemoreceptor
7TM_GPCR_Srb PF02175 Family 3 83 183.40 28 64.95 Changed Serpentine type 7TM GPCR chemoreceptor Srb
7TM_GPCR_Srbc PF10316 Family 60 434 205.60 20 83.09 Changed Serpentine type 7TM GPCR chemoreceptor Srbc
7TM_GPCR_Srd PF10317 Family 56 803 186.10 16 79.43 Changed Serpentine type 7TM GPCR chemoreceptor Srd
7TM_GPCR_Srh PF10318 Family 175 1229 232.90 19 83.25 Changed Serpentine type 7TM GPCR chemoreceptor Srh
7TM_GPCR_Sri PF10327 Family 51 374 218.20 20 81.48 Changed Serpentine type 7TM GPCR chemoreceptor Sri
7TM_GPCR_Srj PF10319 Family 35 222 219.30 30 86.04 Changed Serpentine type 7TM GPCR chemoreceptor Srj
7TM_GPCR_Srsx PF10320 Family 23 1078 182.50 13 70.81 Changed Serpentine type 7TM GPCR chemoreceptor Srsx
7TM_GPCR_Srt PF10321 Family 38 855 207.60 20 84.94 Changed Serpentine type 7TM GPCR chemoreceptor Srt
7TM_GPCR_Sru PF10322 Family 110 325 222.30 25 90.08 Changed Serpentine type 7TM GPCR chemoreceptor Sru
7TM_GPCR_Srv PF10323 Family 25 724 204.50 13 81.24 Changed Serpentine type 7TM GPCR chemoreceptor Srv
7TM_GPCR_Srw PF10324 Family 86 1966 228.90 16 70.02 Changed Serpentine type 7TM GPCR chemoreceptor Srw
7TM_GPCR_Srx PF10328 Family 75 1480 184.80 14 74.14 Changed Serpentine type 7TM GPCR chemoreceptor Srx
7TM_GPCR_Srz PF10325 Family 58 372 209.20 21 75.95 Changed Serpentine type 7TM GPCR chemoreceptor Srz
7TM_GPCR_Str PF10326 Family 166 1831 215.00 19 80.50 Changed Serpentine type 7TM GPCR chemoreceptor Str
7TM_transglut PF14402 Family 50 364 233.50 38 52.61 Changed 7 transmembrane helices usually fused to an inactive transglutaminase
8TM_micro PF17028 Family 7 15 249.10 23 92.57 Changed 8TM Microsporidial transmembrane domain
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z