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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
P-II PF00543 Domain 77 2250 101.80 44 71.67 Changed Nitrogen regulatory protein P-II
P-mevalo_kinase PF04275 Family 50 214 112.00 33 26.51 Changed Phosphomevalonate kinase
P12 PF12669 Family 186 329 44.50 29 71.21 Changed Virus attachment protein p12 family
P120R PF08062 Repeat 6 52 21.90 49 5.63 Changed P120R (NUC006) repeat
p12I PF12233 Family 1 1 99.00 100 100.00 Changed Human adult T cell leukemia/lymphoma virus protein
P16-Arc PF04699 Domain 133 462 143.60 36 89.29 Changed ARP2/3 complex 16 kDa subunit (p16-Arc)
P19Arf_N PF07392 Family 8 16 49.90 60 34.38 Changed Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus
P2 PF07194 Family 228 329 81.10 25 12.03 Changed P2 response regulator binding domain
P21-Arc PF04062 Family 102 439 169.20 47 90.22 Changed ARP2/3 complex ARPC3 (21 kDa) subunit
P22_AR_C PF10548 Domain 9 17 68.60 28 26.51 Changed P22AR C-terminal domain
P22_AR_N PF10547 Domain 27 54 107.20 33 43.71 Changed P22_AR N-terminal domain
P22_CoatProtein PF11651 Family 9 70 261.30 15 85.42 Changed P22 coat protein - gene protein 5
P22_Cro PF14549 Domain 10 27 57.30 30 70.03 Changed DNA-binding transcriptional regulator Cro
P22_portal PF16510 Domain 3 23 549.80 20 82.94 Changed Phage P22-like portal protein
P22_Tail-4 PF11650 Family 4 8 151.20 29 81.43 Changed P22 tail accessory factor
p25-alpha PF05517 Domain 73 424 136.90 35 55.22 Changed p25-alpha
P2X_receptor PF00864 Family 72 710 273.10 37 81.93 Changed ATP P2X receptor
P2_Phage_GpR PF06891 Family 51 91 128.30 29 84.50 Changed P2 phage tail completion protein R (GpR)
P30 PF07390 Family 1 4 170.80 21 86.46 Changed Mycoplasma P30 protein
p31comet PF06581 Family 5 94 229.80 38 83.52 Changed Mad1 and Cdc20-bound-Mad2 binding
P33MONOX PF15302 Family 21 101 248.50 61 95.67 Changed P33 mono-oxygenase
P34-Arc PF04045 Family 96 500 216.60 41 69.08 Changed Arp2/3 complex, 34 kD subunit p34-Arc
P35 PF02331 Domain 1 1 296.00 100 98.67 Changed Apoptosis preventing protein
P3A PF08727 Domain 2 2 55.50 40 2.54 Changed Poliovirus 3A protein like
p450 PF00067 Domain 50 41973 345.60 17 80.95 Changed Cytochrome P450
p47_phox_C PF08944 Disordered 16 57 32.80 64 7.97 Changed NADPH oxidase subunit p47Phox, C terminal domain
P4Ha_N PF08336 Family 205 696 125.30 30 25.95 Changed Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
P5-ATPase PF12409 Family 157 607 124.00 23 10.52 Changed P5-type ATPase cation transporter
P53 PF00870 Domain 5 356 176.50 52 38.19 Changed P53 DNA-binding domain
p53-inducible11 PF14936 Family 9 106 144.10 63 81.81 Changed Tumour protein p53-inducible protein 11
P53_C PF11619 Family 4 12 66.40 62 16.72 Changed Transcription factor P53 - C terminal domain
P53_TAD PF08563 Motif 7 76 24.30 66 6.68 Changed P53 transactivation motif
P53_tetramer PF07710 Motif 22 248 40.80 52 8.08 Changed P53 tetramerisation motif
P5CR_dimer PF14748 Domain 1075 2375 103.80 36 37.03 Changed Pyrroline-5-carboxylate reductase dimerisation
P63C PF10546 Domain 15 22 90.40 33 30.53 Changed P63C domain
P66_CC PF16563 Coiled-coil 16 192 44.30 60 6.91 Changed Coiled-coil and interaction region of P66A and P66B with MBD2
P68HR PF08061 Repeat 5 93 33.80 59 10.59 Changed P68HR (NUC004) repeat
PA PF02225 Family 405 4433 99.40 18 14.76 Changed PA domain
PA-IIL PF07472 Family 10 15 103.30 40 47.20 Changed Fucose-binding lectin II (PA-IIL)
PA-IL PF07828 Family 2 9 115.30 47 76.66 Changed PA-IL-like protein
PA14 PF07691 Domain 23 1587 134.50 14 12.44 Changed PA14 domain
PA14_2 PF10528 Domain 6 230 113.60 24 15.29 Changed GLEYA domain
PA26 PF04636 Family 33 357 379.10 45 84.03 Changed PA26 p53-induced protein (sestrin)
PA28_alpha PF02251 Family 50 291 57.90 40 20.79 Changed Proteasome activator pa28 alpha subunit
PA28_beta PF02252 Family 79 422 130.90 40 50.48 Changed Proteasome activator pa28 beta subunit
PaaA_PaaC PF05138 Domain 71 577 270.80 31 92.38 Changed Phenylacetic acid catabolic protein
PaaB PF06243 Family 48 291 87.20 48 86.31 Changed Phenylacetic acid degradation B
PAAR_motif PF05488 Motif 167 582 68.70 30 25.92 Changed PAAR motif
PaaSYMP PF14738 Family 62 170 147.60 39 20.99 Changed Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
PaaX PF07848 Family 11 264 68.40 31 24.26 Changed PaaX-like protein
PaaX_C PF08223 Family 29 319 156.30 23 56.60 Changed PaaX-like protein C-terminal domain
Pab87_oct PF13969 Domain 10 12 94.30 30 20.63 Changed Pab87 octamerisation domain
PABP PF00658 Family 159 1063 67.20 48 8.31 Changed Poly-adenylate binding protein, unique domain
PAC1 PF16094 Family 15 115 229.00 35 87.53 Changed Proteasome assembly chaperone 4
PAC2 PF09754 Family 396 834 212.40 18 76.51 Changed PAC2 family
PAC3 PF10178 Family 43 208 90.20 29 58.20 Changed Proteasome assembly chaperone 3
PAC4 PF16093 Family 120 274 77.30 27 52.01 Changed Proteasome assembly chaperone 4
Pacifastin_I PF05375 Family 36 215 37.80 35 15.91 Changed Pacifastin inhibitor (LCMII)
Packaging_FI PF14000 Family 3 8 100.40 36 31.54 Changed DNA packaging protein FI
Pacs-1 PF10254 Family 34 330 338.30 46 46.98 Changed PACS-1 cytosolic sorting protein
PACT_coil_coil PF10495 Domain 100 302 79.80 39 3.62 Changed Pericentrin-AKAP-450 domain of centrosomal targeting protein
PAD PF03068 Family 62 376 330.10 43 59.43 Changed Protein-arginine deiminase (PAD)
PadR PF03551 Family 30 3747 73.10 27 48.91 Changed Transcriptional regulator PadR-like family
PADR1 PF08063 Domain 95 239 52.70 40 6.07 Changed PADR1 (NUC008) domain
PAD_M PF08527 Domain 76 244 152.80 44 24.78 Changed Protein-arginine deiminase (PAD) middle domain
PAD_N PF08526 Domain 55 216 106.00 37 16.70 Changed Protein-arginine deiminase (PAD) N-terminal domain
PAD_porph PF04371 Family 453 773 327.50 32 91.42 Changed Porphyromonas-type peptidyl-arginine deiminase
PAE PF03283 Family 63 922 263.50 31 73.35 Changed Pectinacetylesterase
PAF PF15715 Family 10 72 68.40 61 56.69 Changed PCNA-associated factor
PAF-AH_p_II PF03403 Domain 7 1031 224.00 17 59.27 Changed Platelet-activating factor acetylhydrolase, isoform II
Paf1 PF03985 Family 42 447 367.00 25 79.73 Changed Paf1
Paf67 PF10255 Family 74 434 357.30 44 72.87 Changed RNA polymerase I-associated factor PAF67
PAG PF15347 Family 13 64 394.60 56 96.80 Changed Phosphoprotein associated with glycosphingolipid-enriched
PAGK PF15284 Family 3 2 64.00 95 90.78 Changed Phage-encoded virulence factor
PagL PF09411 Family 125 311 143.50 16 55.65 Changed Lipid A 3-O-deacylase (PagL)
PagP PF07017 Family 34 75 141.70 52 72.16 Changed Antimicrobial peptide resistance and lipid A acylation protein PagP
PAH PF02671 Repeat 419 2032 46.40 36 9.09 Changed Paired amphipathic helix repeat
Paired_CXXCH_1 PF09699 Domain 153 880 44.10 28 21.57 Changed Doubled CXXCH motif (Paired_CXXCH_1)
Pal1 PF08316 Family 61 285 110.50 35 25.15 Changed Pal1 cell morphology protein
PALB2_WD40 PF16756 Domain 6 70 297.10 52 32.60 Changed Partner and localizer of BRCA2 WD40 domain
PalH PF08733 Family 81 184 345.10 33 53.86 Changed PalH/RIM21
Palm_thioest PF02089 Domain 1 683 232.30 31 81.25 Changed Palmitoyl protein thioesterase
PALP PF00291 Family 146 13908 295.90 21 74.31 Changed Pyridoxal-phosphate dependent enzyme
Pam16 PF03656 Family 3 481 119.00 35 77.01 Changed Pam16
Pam17 PF08566 Family 75 195 161.50 40 71.46 Changed Mitochondrial import protein Pam17
PAM2 PF07145 Motif 40 977 17.30 50 3.50 Changed Ataxin-2 C-terminal region
Pannexin_like PF12534 Family 48 333 317.40 50 42.99 Changed Pannexin-like TM region of LRRC8
Pantoate_ligase PF02569 Family 797 1431 278.00 40 91.52 Changed Pantoate-beta-alanine ligase
Pantoate_transf PF02548 Family 770 1523 252.90 44 87.44 Changed Ketopantoate hydroxymethyltransferase
PAN_1 PF00024 Domain 88 2723 79.80 16 20.02 Changed PAN domain
PAN_2 PF08276 Domain 60 2395 67.10 31 9.28 Changed PAN-like domain
PAN_3 PF08277 Domain 40 374 69.10 22 23.50 Changed PAN-like domain
PAN_4 PF14295 Domain 36 1191 47.70 21 15.83 Changed PAN domain
Pan_kinase PF03309 Family 146 1187 198.70 30 77.31 Changed Type III pantothenate kinase
PaO PF08417 Family 90 352 93.40 27 19.62 Changed Pheophorbide a oxygenase
PAP1 PF08601 Family 11 264 184.20 22 45.72 Changed Transcription factor PAP1
PAP2 PF01569 Family 76 7054 132.40 20 43.18 Changed PAP2 superfamily
PAP2_3 PF14378 Family 55 1102 167.10 18 50.57 Changed PAP2 superfamily
PAP2_C PF14360 Domain 52 668 72.40 36 19.05 Changed PAP2 superfamily C-terminal
PAPA-1 PF04795 Family 89 366 83.20 33 20.64 Changed PAPA-1-like conserved region
PapA_C PF16911 Family 33 42 118.50 22 28.27 Changed Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
PapB PF03333 Family 14 4 89.20 19 64.56 Changed Adhesin biosynthesis transcription regulatory protein
PapC_C PF13953 Domain 162 443 64.70 27 8.09 Changed PapC C-terminal domain
PapC_N PF13954 Domain 213 390 142.70 26 17.60 Changed PapC N-terminal domain
PapD-like PF14874 Domain 5 247 95.50 22 5.09 Changed Flagellar-associated PapD-like
PapD_C PF02753 Domain 183 448 61.70 26 25.70 Changed Pili assembly chaperone PapD, C-terminal domain
PapD_N PF00345 Domain 88 645 121.30 27 49.84 Changed Pili and flagellar-assembly chaperone, PapD N-terminal domain
PapG_C PF03628 Domain 3 1 110.00 100 32.35 Changed PapG chaperone-binding domain
PapG_N PF03627 Domain 4 0 0.00 0 0.00 Changed PapG carbohydrate binding domain
Papilin_u7 PF16626 Disordered 16 42 86.00 61 7.76 Changed Linking region between Kunitz_BPTI and I-set on papilin
Papilloma_E5 PF03025 Family 13 1 73.00 100 87.95 Changed Papillomavirus E5
Papilloma_E5A PF05776 Family 5 0 0.00 0 0.00 Changed Papillomavirus E5A protein
PapJ PF14855 Domain 3 0 0.00 0 0.00 Changed Pilus-assembly fibrillin subunit, chaperone
Papo_T_antigen PF02380 Family 10 2 86.50 15 40.05 Changed T-antigen specific domain
PAPS_reduct PF01507 Family 27 3062 178.90 23 58.08 Changed Phosphoadenosine phosphosulfate reductase family
PAP_assoc PF03828 Family 82 1728 60.10 28 8.53 Changed Cid1 family poly A polymerase
PAP_central PF04928 Domain 120 973 301.50 37 48.43 Changed Poly(A) polymerase central domain
Pap_E4 PF02711 Family 40 1 92.00 100 96.84 Changed E4 protein
PAP_fibrillin PF04755 Family 12 801 166.40 21 61.83 Changed PAP_fibrillin
PAP_PilO PF06864 Family 10 56 346.00 16 79.90 Changed Pilin accessory protein (PilO)
PAP_RNA-bind PF04926 Domain 113 892 100.60 26 19.60 Changed Poly(A) polymerase predicted RNA binding domain
PAR1 PF06521 Family 16 96 147.80 48 82.69 Changed PAR1 protein
ParA PF10609 Family 158 3192 229.40 38 71.76 Changed NUBPL iron-transfer P-loop NTPase
Paralemmin PF03285 Family 33 256 285.20 31 64.36 Changed Paralemmin
Paramecium_SA PF01508 Domain 74 1519 63.10 26 45.12 Changed Paramecium surface antigen domain
Paramyxo_C PF01692 Family 1 1 204.00 100 94.88 Changed Paramyxovirus non-structural protein C
Paramyxo_ncap PF00973 Family 9 7 454.30 24 87.85 Changed Paramyxovirus nucleocapsid protein
Paramyxo_NS_C PF02725 Family 1 1 164.00 100 88.17 Changed Non-structural protein C
Paramyxo_P PF01806 Domain 1 1 248.00 100 43.66 Changed Paramyxovirinae P phosphoprotein C-terminal region
Paramyxo_PCT PF14320 Domain 1 3 311.00 100 57.88 Changed Phosphoprotein P region PCT disordered
Paramyxo_PNT PF13825 Family 8 4 207.00 27 41.30 Changed Paramyxovirus structural protein V/P N-terminus
Paramyx_P_V_C PF03210 Family 4 4 165.80 21 33.15 Changed Paramyxovirus P/V phosphoprotein C-terminal
Parathyroid PF01279 Family 17 136 88.00 39 59.07 Changed Parathyroid hormone family
ParB PF08775 Domain 16 29 124.80 33 37.91 Changed ParB family
ParBc PF02195 Family 39 3810 91.00 27 27.63 Changed ParB-like nuclease domain
ParBc_2 PF08857 Domain 57 91 171.50 32 60.71 Changed Putative ParB-like nuclease
ParcG PF10274 Family 21 386 151.00 37 35.03 Changed Parkin co-regulated protein
ParD PF09386 Domain 1 12 74.80 59 92.96 Changed Antitoxin ParD
Pardaxin PF07425 Family 3 0 0.00 0 0.00 Changed Pardaxin
ParD_antitoxin PF03693 Domain 4 376 75.20 26 83.49 Changed Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
ParD_like PF11903 Domain 20 164 72.50 31 83.50 Changed ParD-like antitoxin of type II bacterial toxin-antitoxin system
ParE-like_toxin PF15781 Family 20 77 86.20 36 87.21 Changed ParE-like toxin of type II bacterial toxin-antitoxin system
Parecho_VpG PF06344 Domain 1 1 20.00 100 0.92 Changed Parechovirus Genome-linked protein
PaREP1 PF05942 Family 67 213 111.80 24 70.15 Changed Archaeal PaREP1/PaREP8 family
PaRep2a PF07903 Family 6 34 79.70 54 71.95 Changed PaRep2a protein
PaRep2b PF07775 Family 13 46 239.80 29 64.11 Changed PaRep2b protein
ParE_toxin PF05016 Family 157 2153 86.10 17 87.21 Changed ParE toxin of type II toxin-antitoxin system, parDE
ParG PF09274 Domain 3 28 58.70 22 61.34 Changed ParG
PARG_cat PF05028 Family 86 446 266.40 30 52.12 Changed Poly (ADP-ribose) glycohydrolase (PARG)
PARM PF17061 Family 16 55 244.40 56 92.83 Changed PARM
PARP PF00644 Family 28 2475 178.20 20 23.03 Changed Poly(ADP-ribose) polymerase catalytic domain
PARP_reg PF02877 Domain 200 685 132.50 31 16.86 Changed Poly(ADP-ribose) polymerase, regulatory domain
PARP_regulatory PF01358 Domain 9 38 247.80 31 56.23 Changed Poly A polymerase regulatory subunit
partial_CstF PF15861 Domain 11 22 60.80 43 9.77 Changed Partial cleavage stimulation factor domain
Parvo_coat PF00740 Family 5 13 412.60 25 70.63 Changed Parvovirus coat protein VP2
Parvo_coat_N PF08398 Family 4 31 50.30 49 15.73 Changed Parvovirus coat protein VP1
Parvo_NS1 PF01057 Domain 24 62 181.60 23 39.68 Changed Parvovirus non-structural protein NS1
PAS PF00989 Domain 49 9548 104.40 15 15.19 Changed PAS fold
PASTA PF03793 Domain 225 4532 62.20 24 22.20 Changed PASTA domain
PAS_10 PF13596 Domain 48 522 105.60 23 13.60 Changed PAS domain
PAS_11 PF14598 Domain 22 1166 107.80 29 12.39 Changed PAS domain
PAS_2 PF08446 Domain 25 525 109.10 25 10.95 Changed PAS fold
PAS_3 PF08447 Domain 119 10316 86.90 19 13.26 Changed PAS fold
PAS_4 PF08448 Domain 49 9969 109.80 16 17.05 Changed PAS fold
PAS_5 PF07310 Domain 10 120 135.20 23 68.74 Changed PAS domain
PAS_6 PF08348 Domain 219 393 112.80 32 49.51 Changed YheO-like PAS domain
PAS_7 PF12860 Domain 95 978 113.50 22 15.63 Changed PAS fold
PAS_8 PF13188 Domain 260 3215 67.50 15 9.56 Changed PAS domain
PAS_9 PF13426 Domain 133 12495 103.10 16 15.78 Changed PAS domain
Pas_Saposin PF09016 Domain 5 8 75.20 66 99.34 Changed Pas factor saposin fold
PAT1 PF09770 Family 38 403 464.50 22 72.21 Changed Topoisomerase II-associated protein PAT1
Patatin PF01734 Family 111 6405 183.10 18 33.43 Changed Patatin-like phospholipase
Patched PF02460 Family 9 2430 406.60 14 52.45 Changed Patched family
Pathogen_betaC1 PF09593 Domain 36 0 0.00 0 0.00 Changed Beta-satellite pathogenicity beta C1 protein
PATR PF12951 Repeat 798 1534 29.90 45 9.69 Changed Passenger-associated-transport-repeat
PAW PF04721 Domain 44 140 185.20 37 32.23 Changed PNGase C-terminal domain, mannose-binding module PAW
PAX PF00292 Domain 5 1277 118.10 62 30.14 Changed 'Paired box' domain
Pax2_C PF12403 Family 20 267 100.50 54 26.75 Changed Paired-box protein 2 C terminal
Pax7 PF12360 Family 12 138 43.60 71 9.21 Changed Paired box protein 7
Paxillin PF03535 Family 17 143 168.00 42 32.72 Changed Paxillin family
PAXIP1_C PF15364 Family 14 96 127.10 44 59.55 Changed PAXIP1-associated-protein-1 C term PTIP binding protein
PAXNEB PF05625 Domain 74 411 329.40 25 85.98 Changed PAXNEB protein
PAXX PF15384 Family 9 54 175.10 48 89.92 Changed PAXX, PAralog of XRCC4 and XLF, also called C9orf142
PAZ PF02170 Family 263 2300 129.80 22 13.20 Changed PAZ domain
PAZ_siRNAbind PF12212 Domain 11 1 47.00 100 6.10 Changed Piwi/Argonaute/Zwille siRNA-binding domain
PA_decarbox PF05870 Family 17 129 146.20 37 80.59 Changed Phenolic acid decarboxylase (PAD)
PB1 PF00564 Domain 47 3163 84.20 18 13.53 Changed PB1 domain
PB1-F2 PF11986 Domain 2 2 87.00 67 98.31 Changed Influenza A Proapoptotic protein
PBAN PF05874 Family 2 10 117.90 35 64.25 Changed Pheromone biosynthesis activating neuropeptide (PBAN)
PBC PF03792 Family 22 430 157.10 71 47.16 Changed PBC domain
PBCV_basic_adap PF08789 Domain 9 19 35.10 42 20.93 Changed PBCV-specific basic adaptor domain
PBD PF00786 Domain 31 2281 53.70 30 11.02 Changed P21-Rho-binding domain
PBP PF01161 Domain 323 2549 140.70 21 61.50 Changed Phosphatidylethanolamine-binding protein
PBP-Tp47_a PF14889 Domain 23 27 161.40 51 17.96 Changed Penicillin-binding protein Tp47 domain a
PBP-Tp47_c PF14888 Domain 21 28 155.30 56 17.87 Changed Penicillin-binding protein Tp47 domain C
PBP1_TM PF14812 Family 20 44 81.10 46 9.93 Changed Transmembrane domain of transglycosylase PBP1 at N-terminal
PBP5_C PF07943 Domain 66 1361 91.20 21 22.83 Changed Penicillin-binding protein 5, C-terminal domain
PBP_dimer PF03717 Domain 74 3287 176.50 23 26.75 Changed Penicillin-binding Protein dimerisation domain
PBP_GOBP PF01395 Domain 224 1065 109.20 15 65.79 Changed PBP/GOBP family
PBP_like PF12727 Family 135 517 192.30 27 43.83 Changed PBP superfamily domain
PBP_like_2 PF12849 Family 75 2805 253.70 19 77.09 Changed PBP superfamily domain
PBP_N PF17093 Family 2 2 126.50 63 17.51 Changed Penicillin-binding protein N-terminus
PBP_sp32 PF07222 Family 3 63 200.50 50 46.48 Changed Proacrosin binding protein sp32
PBS_linker_poly PF00427 Family 225 474 126.10 41 45.28 Changed Phycobilisome Linker polypeptide
PC-Esterase PF13839 Family 228 2179 243.40 28 62.87 Changed GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
PC4 PF02229 Domain 189 668 51.30 35 36.04 Changed Transcriptional Coactivator p15 (PC4)
PCAF_N PF06466 Domain 30 222 219.00 55 31.61 Changed PCAF (P300/CBP-associated factor) N-terminal domain
PCB_OB PF17092 Family 293 487 112.60 24 13.67 Changed Penicillin-binding protein OB-like domain
Pcc1 PF09341 Family 225 445 76.80 25 60.97 Changed Transcription factor Pcc1
PCDO_beta_N PF12391 Family 75 197 33.90 36 13.88 Changed Protocatechuate 3,4-dioxygenase beta subunit N terminal
PCEMA1 PF07418 Family 4 161 157.60 33 72.57 Changed Acidic phosphoprotein precursor PCEMA1
PcF PF09461 Domain 7 18 41.80 41 25.55 Changed Phytotoxin PcF protein
PcfJ PF14284 Family 51 152 149.70 20 30.83 Changed PcfJ-like protein
PcfK PF14058 Family 28 83 129.60 31 76.81 Changed PcfK-like protein
PCI PF01399 Family 71 5982 110.00 16 21.99 Changed PCI domain
PCIF1_WW PF12237 Family 32 184 173.60 42 25.57 Changed Phosphorylated CTD interacting factor 1 WW domain
PCM1_C PF15717 Family 15 132 435.00 47 29.61 Changed Pericentriolar material 1 C terminus
PCMD PF13201 Domain 106 257 246.00 24 53.30 Changed Putative carbohydrate metabolism domain
PCMT PF01135 Family 9 2126 193.80 28 69.95 Changed Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PCNA_C PF02747 Domain 6 701 118.90 33 45.69 Changed Proliferating cell nuclear antigen, C-terminal domain
PCNA_N PF00705 Domain 7 681 120.30 35 43.24 Changed Proliferating cell nuclear antigen, N-terminal domain
PCNP PF15473 Family 13 137 131.40 56 72.36 Changed PEST, proteolytic signal-containing nuclear protein family
PCP PF02429 Domain 9 0 0.00 0 0.00 Changed Peridinin-chlorophyll A binding protein
PCP_red PF08369 Family 141 243 46.20 40 12.68 Changed Proto-chlorophyllide reductase 57 kD subunit
PcrB PF01884 Domain 4 246 231.20 30 95.44 Changed PcrB family
PCRF PF03462 Domain 1118 3817 184.80 34 51.18 Changed PCRF domain
PCYCGC PF13798 Family 13 49 132.40 35 80.77 Changed Protein of unknown function with PCYCGC motif
PC_rep PF01851 Repeat 125 1777 34.50 28 7.14 Changed Proteasome/cyclosome repeat
PD-C2-AF1 PF09310 Domain 7 91 174.50 38 65.97 Changed POU domain, class 2, associating factor 1
PD40 PF07676 Repeat 97 9170 34.10 24 13.52 Changed WD40-like Beta Propeller Repeat
Pdase_C33_assoc PF14756 Domain 4 0 0.00 0 0.00 Changed Peptidase_C33-associated domain
PDCD2_C PF04194 Domain 215 639 174.10 25 43.26 Changed Programmed cell death protein 2, C-terminal putative domain
PDCD7 PF16021 Family 17 143 230.30 33 61.52 Changed Programmed cell death protein 7
PDCD9 PF07147 Family 23 237 270.90 25 64.33 Changed Mitochondrial 28S ribosomal protein S30 (PDCD9)
PDDEXK_1 PF12705 Domain 108 3230 239.90 14 26.41 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_10 PF07788 Family 14 51 70.80 38 26.88 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_2 PF12784 Domain 33 817 196.20 19 72.43 Changed PD-(D/E)XK nuclease family transposase
PDDEXK_3 PF13366 Domain 58 313 112.00 36 77.88 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_4 PF14281 Domain 29 156 180.60 16 49.43 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_5 PF11645 Family 1 15 126.40 28 89.22 Changed PD-(D/E)XK endonuclease
PDDEXK_6 PF04720 Family 104 450 188.70 31 62.47 Changed PDDEXK-like family of unknown function
PDDEXK_7 PF04411 Domain 17 94 155.30 24 23.52 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_9 PF08011 Family 41 809 98.60 26 20.38 Changed PD-(D/E)XK nuclease superfamily
PDE6_gamma PF04868 Family 7 131 79.80 77 90.03 Changed Retinal cGMP phosphodiesterase, gamma subunit
PDE8 PF08629 Family 3 35 43.60 59 5.54 Changed PDE8 phosphodiesterase
PDEase_I PF00233 Domain 327 3012 222.00 32 32.61 Changed 3'5'-cyclic nucleotide phosphodiesterase
PDEase_II PF02112 Family 4 308 222.90 22 66.08 Changed cAMP phosphodiesterases class-II
PDEase_I_N PF08499 Family 23 280 59.90 68 10.58 Changed 3'5'-cyclic nucleotide phosphodiesterase N-terminal
PDGF PF00341 Domain 32 796 81.90 34 29.98 Changed PDGF/VEGF domain
PDGF_N PF04692 Family 26 138 73.80 41 33.26 Changed Platelet-derived growth factor, N terminal region
PDGLE PF13190 Domain 110 247 86.70 27 36.42 Changed PDGLE domain
PDH PF02153 Family 8 1801 243.80 22 70.07 Changed Prephenate dehydrogenase
PDR_assoc PF08370 Family 185 802 63.70 39 4.90 Changed Plant PDR ABC transporter associated
PDR_CDR PF06422 Family 474 1582 84.50 29 6.88 Changed CDR ABC transporter
PDT PF00800 Family 96 1942 178.10 33 51.83 Changed Prephenate dehydratase
PduV-EutP PF10662 Domain 16 145 138.40 32 77.01 Changed Ethanolamine utilisation - propanediol utilisation
PDU_like PF15953 Family 8 11 152.40 25 91.84 Changed Putative propanediol utilisation
PdxA PF04166 Family 471 1013 289.10 36 84.89 Changed Pyridoxal phosphate biosynthetic protein PdxA
PdxJ PF03740 Domain 414 725 235.00 45 95.06 Changed Pyridoxal phosphate biosynthesis protein PdxJ
PDZ PF00595 Domain 44 23726 81.00 24 15.71 Changed PDZ domain (Also known as DHR or GLGF)
PDZ_1 PF12812 Domain 32 488 76.60 32 13.50 Changed PDZ-like domain
PDZ_2 PF13180 Domain 32 8622 87.10 22 20.92 Changed PDZ domain
PDZ_assoc PF10600 Domain 25 343 65.50 51 8.78 Changed PDZ-associated domain of NMDA receptors
PE PF00934 Family 262 456 91.90 39 18.28 Changed PE family
PE-PPE PF08237 Domain 21 165 204.10 24 45.53 Changed PE-PPE domain
Pea-VEAacid PF08111 Family 2 0 0.00 0 0.00 Changed Pea-VEAacid family
PEARLI-4 PF05278 Family 6 139 218.80 24 53.96 Changed Arabidopsis phospholipase-like protein (PEARLI 4)
Pecanex_C PF05041 Family 23 358 202.70 54 12.59 Changed Pecanex protein (C-terminus)
Pectate_lyase PF03211 Family 87 539 189.80 44 69.87 Changed Pectate lyase
Pectate_lyase22 PF14583 Domain 3 54 331.00 32 81.21 Changed Oligogalacturonate lyase
Pectate_lyase_2 PF06917 Family 3 16 541.00 40 97.37 Changed Periplasmic pectate lyase
Pectate_lyase_3 PF12708 Family 51 1679 177.60 20 32.85 Changed Pectate lyase superfamily protein
Pectinesterase PF01095 Family 28 2938 247.60 31 59.42 Changed Pectinesterase
Pec_lyase PF09492 Family 11 109 262.70 30 55.00 Changed Pectic acid lyase
Pec_lyase_C PF00544 Domain 5 1442 185.90 31 43.64 Changed Pectate lyase
Pec_lyase_N PF04431 Family 40 122 58.50 36 13.36 Changed Pectate lyase, N terminus
Pedibin PF08182 Family 3 3 35.00 38 5.86 Changed Pedibin/Hym-346 family
PEGA PF08308 Domain 20 906 67.90 22 21.42 Changed PEGA domain
PEGSRP PF07623 Motif 2 13 27.00 81 27.27 Changed Protein of unknown function (DUF1584)
PEHE PF15275 Family 47 326 131.60 29 16.94 Changed PEHE domain
PelD_GGDEF PF16963 Domain 18 35 121.50 27 26.94 Changed PelD GGDEF domain
PelG PF16933 Family 72 88 449.80 30 92.90 Changed Putative exopolysaccharide Exporter (EPS-E)
Pellino PF04710 Family 21 315 341.10 57 90.12 Changed Pellino
PELOTA_1 PF15608 Domain 44 128 81.60 46 16.42 Changed PELOTA RNA binding domain
PemK_toxin PF02452 Family 171 1569 105.40 25 83.79 Changed PemK-like, MazF-like toxin of type II toxin-antitoxin system
PEMT PF04191 Family 83 1524 102.50 20 37.20 Changed Phospholipid methyltransferase
PEN-2 PF10251 Family 45 169 87.00 39 72.94 Changed Presenilin enhancer-2 subunit of gamma secretase
Penaeidin PF05927 Family 8 0 0.00 0 0.00 Changed Penaeidin
Penicillinase_R PF03965 Family 46 1352 112.40 24 86.20 Changed Penicillinase repressor
Penicil_amidase PF01804 Family 349 698 708.20 22 91.36 Changed Penicillin amidase
Pentapeptide PF00805 Repeat 189 10648 37.90 33 31.63 Changed Pentapeptide repeats (8 copies)
Pentapeptide_2 PF01469 Repeat 55 860 40.00 46 36.18 Changed Pentapeptide repeats (8 copies)
Pentapeptide_3 PF13576 Repeat 130 344 48.20 27 20.35 Changed Pentapeptide repeats (9 copies)
Pentapeptide_4 PF13599 Repeat 28 2135 76.10 16 30.76 Changed Pentapeptide repeats (9 copies)
Pentaxin PF00354 Domain 8 1043 181.60 28 25.25 Changed Pentaxin family
PEP-utilisers_N PF05524 Family 902 1463 121.40 25 19.17 Changed PEP-utilising enzyme, N-terminal
PEP-utilizers PF00391 Family 1465 3971 76.30 33 10.31 Changed PEP-utilising enzyme, mobile domain
PEP-utilizers_C PF02896 Domain 15 3114 311.20 32 42.68 Changed PEP-utilising enzyme, TIM barrel domain
Pep3_Vps18 PF05131 Family 131 409 148.50 26 15.54 Changed Pep3/Vps18/deep orange family
PEPcase PF00311 Family 55 1234 598.00 32 82.14 Changed Phosphoenolpyruvate carboxylase
PEPcase_2 PF14010 Family 17 55 492.70 36 99.02 Changed Phosphoenolpyruvate carboxylase
PEPCK PF00821 Family 214 723 543.60 50 93.44 Changed Phosphoenolpyruvate carboxykinase
PEPCK_ATP PF01293 Family 275 1233 419.70 44 82.31 Changed Phosphoenolpyruvate carboxykinase
Pepsin-I3 PF06394 Domain 6 105 64.30 22 38.54 Changed Pepsin inhibitor-3-like repeated domain
PepSY PF03413 Domain 180 1161 63.00 20 26.69 Changed Peptidase propeptide and YPEB domain
PepSY_2 PF13670 Domain 39 240 82.60 22 80.25 Changed Peptidase propeptide and YPEB domain
PepSY_like PF11396 Domain 42 524 79.20 20 69.18 Changed Putative beta-lactamase-inhibitor-like, PepSY-like
PepSY_TM PF03929 Family 555 1288 343.80 14 77.35 Changed PepSY-associated TM region
PepSY_TM_like_2 PF16357 Family 12 146 189.00 27 89.48 Changed Putative PepSY_TM-like
Peptidase_A17 PF05380 Family 200 1026 124.20 26 12.86 Changed Pao retrotransposon peptidase
Peptidase_A21 PF03566 Family 3 4 650.80 25 94.01 Changed Peptidase family A21
Peptidase_A22B PF04258 Family 14 1249 259.10 28 64.21 Changed Signal peptide peptidase
Peptidase_A24 PF01478 Family 79 1763 111.90 22 49.66 Changed Type IV leader peptidase family
Peptidase_A25 PF03418 Family 18 446 209.60 26 91.26 Changed Germination protease
Peptidase_A2B PF12384 Family 2 21 142.90 25 20.72 Changed Ty3 transposon peptidase
Peptidase_A2E PF12382 Family 2 11 137.00 100 10.28 Changed Retrotransposon peptidase
Peptidase_A3 PF02160 Family 2 4 203.80 22 30.66 Changed Cauliflower mosaic virus peptidase (A3)
Peptidase_A4 PF01828 Family 136 330 193.90 29 74.04 Changed Peptidase A4 family
Peptidase_A6 PF01829 Domain 1 1 358.00 100 89.72 Changed Peptidase A6 family
Peptidase_A8 PF01252 Family 864 1763 145.40 30 81.79 Changed Signal peptidase (SPase) II
Peptidase_C1 PF00112 Domain 157 5803 199.30 29 54.04 Changed Papain family cysteine protease
Peptidase_C10 PF01640 Domain 90 154 186.70 29 28.80 Changed Peptidase C10 family
Peptidase_C101 PF16218 Family 19 135 233.80 51 70.48 Changed Peptidase family C101
Peptidase_C108 PF04327 Family 360 493 101.60 27 92.94 Changed Cysteine peptidase C108, N-terminal of ribosomal L27
Peptidase_C11 PF03415 Family 6 227 329.00 16 55.58 Changed Clostripain family
Peptidase_C12 PF01088 Domain 404 1432 193.80 30 62.76 Changed Ubiquitin carboxyl-terminal hydrolase, family 1
Peptidase_C13 PF01650 Family 34 998 226.80 33 54.92 Changed Peptidase C13 family
Peptidase_C14 PF00656 Domain 115 3842 237.50 16 49.18 Changed Caspase domain
Peptidase_C15 PF01470 Domain 7 729 179.00 27 79.45 Changed Pyroglutamyl peptidase
Peptidase_C16 PF01831 Family 1 2 249.00 100 4.28 Changed Peptidase C16 family
Peptidase_C1_2 PF03051 Family 13 904 336.60 28 88.96 Changed Peptidase C1-like family
Peptidase_C2 PF00648 Family 193 2719 263.60 29 34.63 Changed Calpain family cysteine protease
Peptidase_C21 PF05381 Family 2 3 108.00 33 5.57 Changed Tymovirus endopeptidase
Peptidase_C23 PF05379 Domain 3 3 87.70 24 4.30 Changed Carlavirus endopeptidase
Peptidase_C24 PF03510 Family 5 5 103.20 31 4.92 Changed 2C endopeptidase (C24) cysteine protease family
Peptidase_C25 PF01364 Domain 76 228 369.00 21 32.02 Changed Peptidase family C25
Peptidase_C25_C PF03785 Domain 7 12 80.30 25 6.69 Changed Peptidase family C25, C terminal ig-like domain
Peptidase_C26 PF07722 Domain 37 1320 204.30 26 70.47 Changed Peptidase C26
Peptidase_C27 PF05407 Family 1 1 166.00 100 7.84 Changed Rubella virus endopeptidase
Peptidase_C28 PF05408 Family 1 1 201.00 100 8.66 Changed Foot-and-mouth virus L-proteinase
Peptidase_C3 PF00548 Family 6 29 160.90 19 7.39 Changed 3C cysteine protease (picornain 3C)
Peptidase_C30 PF05409 Family 6 10 288.70 46 5.02 Changed Coronavirus endopeptidase C30
Peptidase_C31 PF05410 Family 3 0 0.00 0 0.00 Changed Porcine arterivirus-type cysteine proteinase alpha
Peptidase_C32 PF05411 Family 4 0 0.00 0 0.00 Changed Equine arteritis virus putative proteinase
Peptidase_C33 PF05412 Family 4 1 100.00 100 3.15 Changed Equine arterivirus Nsp2-type cysteine proteinase
Peptidase_C34 PF05413 Family 5 1 92.00 100 4.88 Changed Putative closterovirus papain-like endopeptidase
Peptidase_C36 PF05415 Family 1 1 104.00 100 4.93 Changed Beet necrotic yellow vein furovirus-type papain-like endopeptidase
Peptidase_C37 PF05416 Family 5 2 331.00 20 16.27 Changed Southampton virus-type processing peptidase
Peptidase_C39 PF03412 Family 36 1113 128.20 23 19.46 Changed Peptidase C39 family
Peptidase_C39_2 PF13529 Domain 43 689 141.70 18 38.55 Changed Peptidase_C39 like family
Peptidase_C3G PF12381 Family 3 3 215.00 19 9.02 Changed Tungro spherical virus-type peptidase
Peptidase_C4 PF00863 Family 2 6 226.80 21 7.32 Changed Peptidase family C4
Peptidase_C41 PF05417 Family 1 1 161.00 100 9.51 Changed Hepatitis E cysteine protease
Peptidase_C42 PF05533 Domain 8 1 88.00 100 2.84 Changed Beet yellows virus-type papain-like endopeptidase C42
Peptidase_C47 PF05543 Family 4 5 174.80 42 49.83 Changed Staphopain peptidase C47
Peptidase_C48 PF02902 Domain 27 4080 165.50 15 29.17 Changed Ulp1 protease family, C-terminal catalytic domain
Peptidase_C5 PF00770 Domain 4 12 139.40 49 72.17 Changed Adenovirus endoprotease
Peptidase_C50 PF03568 Family 129 470 332.00 27 21.41 Changed Peptidase family C50
Peptidase_C53 PF05550 Domain 1 1 168.00 100 4.21 Changed Pestivirus Npro endopeptidase C53
Peptidase_C54 PF03416 Family 209 833 263.40 33 61.60 Changed Peptidase family C54
Peptidase_C57 PF03290 Family 10 12 425.90 55 97.19 Changed Vaccinia virus I7 processing peptidase
Peptidase_C58 PF03543 Family 14 40 174.20 16 13.60 Changed Yersinia/Haemophilus virulence surface antigen
Peptidase_C6 PF00851 Family 3 7 344.60 25 13.35 Changed Helper component proteinase
Peptidase_C62 PF12380 Family 1 2 284.00 100 5.29 Changed Gill-associated viral 3C-like peptidase
Peptidase_C65 PF10275 Family 21 661 203.80 26 61.43 Changed Peptidase C65 Otubain
Peptidase_C69 PF03577 Family 11 825 321.80 23 70.68 Changed Peptidase family C69
Peptidase_C7 PF01830 Family 1 1 243.00 100 39.07 Changed Peptidase C7 family
Peptidase_C70 PF12385 Family 12 199 146.20 17 41.54 Changed Papain-like cysteine protease AvrRpt2
Peptidase_C71 PF12386 Family 3 2 119.00 15 60.56 Changed Pseudomurein endo-isopeptidase Pei
Peptidase_C74 PF12387 Family 1 1 200.00 100 5.02 Changed Pestivirus NS2 peptidase
Peptidase_C78 PF07910 Family 38 589 192.20 29 43.44 Changed Peptidase family C78
Peptidase_C8 PF03569 Family 1 1 208.00 100 6.57 Changed Peptidase family C8
Peptidase_C80 PF11713 Domain 13 45 155.40 34 6.99 Changed Peptidase C80 family
Peptidase_C9 PF01707 Family 3 4 205.00 57 8.26 Changed Peptidase family C9
Peptidase_C92 PF05708 Family 17 303 154.00 17 52.65 Changed Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
Peptidase_C93 PF06035 Family 54 253 148.60 30 64.60 Changed Bacterial transglutaminase-like cysteine proteinase BTLCP
Peptidase_C97 PF05903 Domain 30 1105 135.50 33 44.93 Changed PPPDE putative peptidase domain
Peptidase_C98 PF15499 Family 24 77 244.10 54 26.70 Changed Ubiquitin-specific peptidase-like, SUMO isopeptidase
Peptidase_G2 PF11962 Domain 7 18 185.40 30 31.22 Changed Peptidase_G2, IMC autoproteolytic cleavage domain
Peptidase_M1 PF01433 Family 27 5510 318.10 21 43.68 Changed Peptidase family M1
Peptidase_M10 PF00413 Domain 67 2400 162.70 37 36.31 Changed Matrixin
Peptidase_M10_C PF08548 Domain 16 194 188.70 21 23.15 Changed Peptidase M10 serralysin C terminal
Peptidase_M11 PF05548 Family 6 188 251.60 22 47.00 Changed Gametolysin peptidase M11
Peptidase_M13 PF01431 Family 9 2381 188.20 34 29.04 Changed Peptidase family M13
Peptidase_M13_N PF05649 Family 911 2471 341.30 20 52.80 Changed Peptidase family M13
Peptidase_M14 PF00246 Domain 70 4915 251.10 19 48.21 Changed Zinc carboxypeptidase
Peptidase_M15 PF01427 Family 4 517 172.50 26 75.39 Changed D-ala-D-ala dipeptidase
Peptidase_M15_2 PF05951 Family 10 258 148.30 41 56.81 Changed Bacterial protein of unknown function (DUF882)
Peptidase_M15_3 PF08291 Domain 12 266 110.20 23 49.71 Changed Peptidase M15
Peptidase_M15_4 PF13539 Family 273 458 73.20 29 26.87 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_M16 PF00675 Family 24 6801 134.70 20 21.03 Changed Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 Domain 139 8758 181.80 14 34.17 Changed Peptidase M16 inactive domain
Peptidase_M16_M PF16187 Family 283 1075 260.10 26 27.99 Changed Middle or third domain of peptidase_M16
Peptidase_M17 PF00883 Domain 812 2159 297.50 37 61.62 Changed Cytosol aminopeptidase family, catalytic domain
Peptidase_M17_N PF02789 Domain 73 1322 124.40 20 24.88 Changed Cytosol aminopeptidase family, N-terminal domain
Peptidase_M18 PF02127 Family 8 1484 400.90 32 90.66 Changed Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M19 PF01244 Domain 42 1551 310.00 28 81.46 Changed Membrane dipeptidase (Peptidase family M19)
Peptidase_M2 PF01401 Family 67 729 469.70 35 84.40 Changed Angiotensin-converting enzyme
Peptidase_M20 PF01546 Family 360 12272 323.50 14 74.79 Changed Peptidase family M20/M25/M40
Peptidase_M22 PF00814 Family 111 4297 234.20 24 74.45 Changed Glycoprotease family
Peptidase_M23 PF01551 Family 243 6651 98.00 31 26.38 Changed Peptidase family M23
Peptidase_M24 PF00557 Domain 444 10314 227.10 22 54.06 Changed Metallopeptidase family M24
Peptidase_M24_C PF16188 Domain 656 1146 61.90 36 10.08 Changed C-terminal region of peptidase_M24
Peptidase_M26_C PF07580 Family 8 19 510.90 22 34.74 Changed M26 IgA1-specific Metallo-endopeptidase C-terminal region
Peptidase_M26_N PF05342 Family 6 32 158.40 24 16.29 Changed M26 IgA1-specific Metallo-endopeptidase N-terminal region
Peptidase_M27 PF01742 Family 4 9 395.10 38 31.93 Changed Clostridial neurotoxin zinc protease
Peptidase_M28 PF04389 Family 56 4911 200.70 20 35.29 Changed Peptidase family M28
Peptidase_M29 PF02073 Family 258 836 347.50 25 84.82 Changed Thermophilic metalloprotease (M29)
Peptidase_M3 PF01432 Family 29 3454 387.40 21 63.23 Changed Peptidase family M3
Peptidase_M30 PF10460 Family 4 17 302.80 28 47.83 Changed Peptidase M30
Peptidase_M32 PF02074 Family 1 473 475.10 35 96.60 Changed Carboxypeptidase Taq (M32) metallopeptidase
Peptidase_M35 PF02102 Family 4 185 312.30 31 93.94 Changed Deuterolysin metalloprotease (M35) family
Peptidase_M36 PF02128 Family 119 358 339.10 38 52.51 Changed Fungalysin metallopeptidase (M36)
Peptidase_M3_N PF08439 Family 527 866 68.50 24 11.42 Changed Oligopeptidase F
Peptidase_M4 PF01447 Domain 112 500 141.20 29 23.70 Changed Thermolysin metallopeptidase, catalytic domain
Peptidase_M41 PF01434 Family 27 4186 200.40 36 30.01 Changed Peptidase family M41
Peptidase_M42 PF05343 Family 48 1190 282.00 28 80.61 Changed M42 glutamyl aminopeptidase
Peptidase_M43 PF05572 Family 4 670 141.20 29 22.56 Changed Pregnancy-associated plasma protein-A
Peptidase_M44 PF03410 Family 8 11 598.50 50 99.82 Changed Metallopeptidase from vaccinia pox
Peptidase_M48 PF01435 Domain 21 4928 192.00 20 51.60 Changed Peptidase family M48
Peptidase_M48_N PF16491 Domain 330 798 174.40 27 39.78 Changed CAAX prenyl protease N-terminal, five membrane helices
Peptidase_M49 PF03571 Family 114 730 357.30 27 67.83 Changed Peptidase family M49
Peptidase_M4_C PF02868 Domain 57 504 164.30 34 28.01 Changed Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M50 PF02163 Family 56 3029 266.60 20 72.20 Changed Peptidase family M50
Peptidase_M50B PF13398 Family 72 478 181.60 25 68.98 Changed Peptidase M50B-like
Peptidase_M54 PF07998 Family 5 231 117.10 30 42.32 Changed Peptidase family M54
Peptidase_M55 PF04951 Family 140 233 259.80 33 95.86 Changed D-aminopeptidase
Peptidase_M56 PF05569 Domain 12 844 236.30 18 42.17 Changed BlaR1 peptidase M56
Peptidase_M57 PF12388 Family 10 62 177.00 25 59.64 Changed Dual-action HEIGH metallo-peptidase
Peptidase_M6 PF05547 Domain 5 362 347.90 19 44.71 Changed Immune inhibitor A peptidase M6
Peptidase_M60 PF13402 Domain 29 364 344.10 23 39.28 Changed Peptidase M60, enhancin and enhancin-like
Peptidase_M61 PF05299 Family 186 371 115.80 35 19.56 Changed M61 glycyl aminopeptidase
Peptidase_M64 PF09471 Family 9 226 248.70 26 45.71 Changed IgA Peptidase M64
Peptidase_M66 PF10462 Family 10 49 265.00 22 32.80 Changed Peptidase M66
Peptidase_M7 PF02031 Domain 2 70 131.80 46 64.49 Changed Streptomyces extracellular neutral proteinase (M7) family
Peptidase_M73 PF12389 Family 14 123 146.30 20 65.83 Changed Camelysin metallo-endopeptidase
Peptidase_M74 PF03411 Family 86 168 227.10 37 72.82 Changed Penicillin-insensitive murein endopeptidase
Peptidase_M75 PF09375 Family 76 595 281.30 19 75.01 Changed Imelysin
Peptidase_M76 PF09768 Family 133 422 165.20 39 69.03 Changed Peptidase M76 family
Peptidase_M8 PF01457 Family 8 1107 296.30 19 64.45 Changed Leishmanolysin
Peptidase_M85 PF13678 Family 8 1 251.00 100 76.06 Changed NFkB-p65-degrading zinc protease
Peptidase_M9 PF01752 Family 28 98 286.00 29 37.76 Changed Collagenase
Peptidase_M90 PF06167 Family 119 279 237.20 30 89.14 Changed Glucose-regulated metallo-peptidase M90
Peptidase_M91 PF14891 Family 28 50 179.20 21 32.41 Changed Effector protein
Peptidase_M99 PF17033 Domain 2 46 254.20 38 53.10 Changed Carboxypeptidase controlling helical cell shape catalytic
Peptidase_M99_C PF17129 Domain 2 30 96.80 35 20.92 New C-terminal domain of metallo-carboxypeptidase
Peptidase_M99_m PF17130 Domain 2 8 72.50 41 14.50 New beta-barrel domain of carboxypeptidase M99
Peptidase_M9_N PF08453 Family 42 70 181.10 23 21.12 Changed Peptidase family M9 N-terminal
Peptidase_MA_2 PF13485 Domain 2 54 191.10 21 44.93 Changed Peptidase MA superfamily
Peptidase_Mx PF15887 Family 99 148 237.60 44 66.21 Changed Putative zinc-binding metallo-peptidase
Peptidase_Mx1 PF15890 Family 66 87 242.70 30 77.42 Changed Putative zinc-binding metallo-peptidase
Peptidase_S10 PF00450 Domain 57 5358 337.00 22 80.87 Changed Serine carboxypeptidase
Peptidase_S11 PF00768 Domain 11 2855 230.30 29 58.67 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_S13 PF02113 Family 9 1243 284.40 19 85.75 Changed D-Ala-D-Ala carboxypeptidase 3 (S13) family
Peptidase_S15 PF02129 Family 46 1722 237.20 18 44.25 Changed X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S21 PF00716 Family 5 18 264.30 26 50.38 Changed Assemblin (Peptidase family S21)
Peptidase_S24 PF00717 Domain 177 6817 73.60 23 32.76 Changed Peptidase S24-like
Peptidase_S26 PF10502 Domain 25 1291 98.10 30 37.83 Changed Signal peptidase, peptidase S26
Peptidase_S28 PF05577 Domain 12 1658 335.70 23 79.77 Changed Serine carboxypeptidase S28
Peptidase_S29 PF02907 Domain 9 2 148.50 31 4.97 Changed Hepatitis C virus NS3 protease
Peptidase_S3 PF00944 Domain 2 4 137.00 52 12.70 Changed Alphavirus core protein
Peptidase_S30 PF01577 Family 26 5 211.20 20 9.80 Changed Potyvirus P1 protease
Peptidase_S31 PF05578 Family 1 1 211.00 100 5.29 Changed Pestivirus NS3 polyprotein peptidase S31
Peptidase_S32 PF05579 Family 6 1 307.00 100 9.67 Changed Equine arteritis virus serine endopeptidase S32
Peptidase_S37 PF05576 Family 1 77 420.30 38 91.63 Changed PS-10 peptidase S37
Peptidase_S39 PF02122 Family 15 12 189.50 26 24.97 Changed Peptidase S39
Peptidase_S41 PF03572 Family 119 3843 170.80 25 31.51 Changed Peptidase family S41
Peptidase_S41_N PF11918 Domain 48 237 113.90 29 36.25 Changed N-terminal domain of Peptidase_S41 in eukaryotic IRBP
Peptidase_S46 PF10459 Family 45 327 647.90 34 96.19 Changed Peptidase S46
Peptidase_S48 PF03574 Family 3 23 149.00 79 49.68 Changed Peptidase family S48
Peptidase_S49 PF01343 Family 17 2196 151.50 26 47.42 Changed Peptidase family S49
Peptidase_S49_N PF08496 Family 107 199 147.00 43 41.87 Changed Peptidase family S49 N-terminal
Peptidase_S51 PF03575 Domain 22 815 195.10 19 74.88 Changed Peptidase family S51
Peptidase_S55 PF05580 Family 254 383 191.50 40 47.35 Changed SpoIVB peptidase S55
Peptidase_S58 PF03576 Family 240 676 313.60 30 90.35 Changed Peptidase family S58
Peptidase_S6 PF02395 Family 3 45 397.20 17 45.40 Changed Immunoglobulin A1 protease
Peptidase_S64 PF08192 Family 20 62 458.20 25 74.13 Changed Peptidase family S64
Peptidase_S66 PF02016 Family 713 1003 285.70 25 89.26 Changed LD-carboxypeptidase
Peptidase_S68 PF10461 Family 11 55 32.60 63 3.88 Changed Peptidase S68
Peptidase_S7 PF00949 Family 7 14 106.90 22 14.32 Changed Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S74 PF13884 Domain 239 485 58.20 32 7.36 Changed Chaperone of endosialidase
Peptidase_S76 PF13611 Domain 6 2 123.00 23 3.76 Changed Serine peptidase of plant viral polyprotein, P1
Peptidase_S77 PF03420 Family 2 12 166.80 31 43.29 Changed Prohead core protein serine protease
Peptidase_S78 PF04586 Family 15 386 153.10 23 56.17 Changed Caudovirus prohead serine protease
Peptidase_S78_2 PF14550 Family 17 35 121.20 32 33.97 Changed Putative phage serine protease XkdF
Peptidase_S8 PF00082 Domain 43 11700 305.20 19 45.52 Changed Subtilase family
Peptidase_S80 PF07230 Family 2 4 444.50 29 77.68 Changed Bacteriophage T4-like capsid assembly protein (Gp20)
Peptidase_S8_N PF16361 Family 55 81 138.30 28 14.89 Changed N-terminal of Subtilase family
Peptidase_S9 PF00326 Domain 64 7160 195.10 19 30.04 Changed Prolyl oligopeptidase family
Peptidase_S9_N PF02897 Domain 30 1583 369.00 20 55.21 Changed Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_U32 PF01136 Family 97 2533 224.90 26 52.66 Changed Peptidase family U32
Peptidase_U32_C PF16325 Domain 418 677 82.80 27 19.72 Changed Peptidase family U32 C-terminal domain
Peptidase_U4 PF03419 Family 141 322 262.40 21 95.40 Changed Sporulation factor SpoIIGA
Peptidase_U40 PF10464 Family 1 1 212.00 100 96.36 Changed Peptidase U40
Peptidase_U49 PF10463 Family 4 11 178.20 18 57.26 Changed Peptidase U49
Peptidase_U57 PF05582 Family 76 195 227.60 38 97.57 Changed YabG peptidase U57
Pept_tRNA_hydro PF01195 Domain 1071 2103 179.30 34 88.61 Changed Peptidyl-tRNA hydrolase
PepX_C PF08530 Domain 24 1222 229.30 17 36.61 Changed X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PepX_N PF09168 Domain 32 53 147.00 33 19.42 Changed X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Pep_deformylase PF01327 Domain 83 2737 154.00 34 83.79 Changed Polypeptide deformylase
PEP_hydrolase PF09370 Domain 81 243 252.50 56 70.27 Changed Phosphoenolpyruvate hydrolase-like
Pep_M12B_propep PF01562 Family 255 3031 128.60 22 14.67 Changed Reprolysin family propeptide
PEP_mutase PF13714 Domain 82 1448 240.60 30 77.33 Changed Phosphoenolpyruvate phosphomutase
Per1 PF04080 Family 165 510 236.70 35 74.69 Changed Per1-like
PerB PF06590 Family 2 0 0.00 0 0.00 Changed PerB protein
PerC PF06069 Family 4 14 61.50 25 54.19 Changed PerC transcriptional activator
Pericardin_rpt PF07054 Repeat 19 208 33.40 68 36.06 Changed Pericardin like repeat
Perilipin PF03036 Family 51 500 271.40 26 64.04 Changed Perilipin family
Period_C PF12114 Family 28 227 183.80 42 15.46 Changed Period protein 2/3C-terminal region
Peripla_BP_1 PF00532 Domain 6 1054 252.90 18 76.14 Changed Periplasmic binding proteins and sugar binding domain of LacI family
Peripla_BP_2 PF01497 Domain 27 4975 234.70 16 69.67 Changed Periplasmic binding protein
Peripla_BP_3 PF13377 Domain 85 8046 161.60 24 46.01 Changed Periplasmic binding protein-like domain
Peripla_BP_4 PF13407 Family 169 4464 258.20 18 72.77 Changed Periplasmic binding protein domain
Peripla_BP_5 PF13433 Domain 38 455 362.90 44 83.61 Changed Periplasmic binding protein domain
Peripla_BP_6 PF13458 Family 164 4661 339.30 17 79.90 Changed Periplasmic binding protein
Periviscerokin PF08259 Family 3 2 11.00 100 10.00 Changed Periviscerokinin family
Perm-CXXC PF15629 Family 27 78 31.60 52 1.98 Changed Permuted single zf-CXXC unit
peroxidase PF00141 Family 159 6836 233.30 26 72.87 Changed Peroxidase
Peroxidase_2 PF01328 Family 1 628 144.50 24 42.59 Changed Peroxidase, family 2
Peroxin-13_N PF04088 Family 93 317 135.50 39 34.24 Changed Peroxin 13, N-terminal region
Peroxin-22 PF12827 Family 25 40 115.10 28 65.14 Changed Peroxisomal biogenesis protein family
Peroxin-3 PF04882 Family 101 552 255.90 21 84.19 Changed Peroxin-3
Pertactin PF03212 Family 8 162 120.30 24 12.90 Changed Pertactin
Pertus-S4-tox PF09275 Domain 1 1 110.00 100 72.37 Changed Pertussis toxin S4 subunit
Pertus-S5-tox PF09276 Domain 1 1 97.00 100 72.93 Changed Pertussis toxin S5 subunit
Pertussis_S1 PF02917 Domain 2 21 113.90 28 19.89 Changed Pertussis toxin, subunit 1
Pertussis_S2S3 PF02918 Domain 3 4 104.80 35 49.94 Changed Pertussis toxin, subunit 2 and 3, C-terminal domain
Pes-10 PF07149 Family 9 20 247.90 19 91.44 Changed Pes-10
Pescadillo_N PF06732 Family 38 473 249.20 46 44.75 Changed Pescadillo N-terminus
Pesticin PF16754 Domain 8 31 153.60 23 28.38 Changed Bacterial toxin homologue of phage lysozyme, C-term
Pestivirus_E2 PF16329 Domain 1 1 372.00 100 9.33 Changed Pestivirus envelope glycoprotein E2
PET PF06297 Domain 41 601 82.00 47 14.17 Changed PET Domain
PET117 PF15786 Family 100 239 67.70 36 71.16 Changed PET assembly of cytochrome c oxidase, mitochondrial
PET122 PF05476 Family 7 23 252.20 38 91.88 Changed PET122
Pet127 PF08634 Domain 102 194 272.10 48 32.94 Changed Mitochondrial protein Pet127
Pet191_N PF10203 Family 74 327 65.20 43 56.29 Changed Cytochrome c oxidase assembly protein PET191
Pet20 PF08692 Family 15 92 93.90 24 38.57 Changed Mitochondrial protein Pet20
PetG PF02529 Family 15 88 35.80 71 89.74 Changed Cytochrome B6-F complex subunit 5
PetL PF05115 Family 21 69 30.90 51 91.43 Changed Cytochrome B6-F complex subunit VI (PetL)
PetM PF08041 Family 25 105 30.00 50 34.78 Changed PetM family of cytochrome b6f complex subunit 7
PetN PF03742 Family 16 82 28.70 63 78.61 Changed PetN
PEX-1N PF09262 Domain 115 354 80.30 35 7.33 Changed Peroxisome biogenesis factor 1, N-terminal
PEX-2N PF09263 Domain 17 72 80.80 50 6.87 Changed Peroxisome biogenesis factor 1, N-terminal
PEX11 PF05648 Family 49 1020 210.10 19 81.79 Changed Peroxisomal biogenesis factor 11 (PEX11)
Pex14_N PF04695 Family 145 556 122.80 26 31.67 Changed Peroxisomal membrane anchor protein (Pex14p) conserved region
Pex16 PF08610 Family 116 373 307.80 26 87.17 Changed Peroxisomal membrane protein (Pex16)
Pex19 PF04614 Family 84 433 227.50 26 72.73 Changed Pex19 protein family
Pex24p PF06398 Family 52 783 271.30 22 41.95 Changed Integral peroxisomal membrane peroxin
Pex26 PF07163 Family 11 71 264.40 48 81.83 Changed Pex26 protein
Pex2_Pex12 PF04757 Family 108 1108 215.30 17 56.90 Changed Pex2 / Pex12 amino terminal region
PE_PPE_C PF12484 Family 89 180 84.30 28 21.35 Changed Polymorphic PE/PPE proteins C terminal
PFEMP PF03011 Domain 11 232 148.50 27 12.57 Changed PFEMP DBL domain
Pfg27 PF09216 Domain 2 6 172.80 41 31.62 Changed Pfg27
PFK PF00365 Domain 859 4118 290.90 31 73.18 Changed Phosphofructokinase
PfkB PF00294 Family 52 10167 270.10 17 82.14 Changed pfkB family carbohydrate kinase
PFL-like PF02901 Family 124 1031 581.80 35 78.92 Changed Pyruvate formate lyase-like
PFOR_II PF17147 Domain 27 1959 99.90 27 13.41 New Pyruvate:ferredoxin oxidoreductase core domain II
PFO_beta_C PF12367 Family 136 259 67.10 33 23.10 Changed Pyruvate ferredoxin oxidoreductase beta subunit C terminal
PFU PF09070 Domain 142 468 107.00 38 14.87 Changed PFU (PLAA family ubiquitin binding)
PfUIS3 PF11567 Family 2 7 97.30 55 44.69 Changed Plasmodium falciparum UIS3 membrane protein
Pga1 PF10333 Family 14 102 168.20 18 75.42 Changed GPI-Mannosyltransferase II co-activator
PGA2 PF07543 Family 29 139 118.50 29 76.86 Changed Protein trafficking PGA2
PgaD PF13994 Family 21 42 129.90 22 80.84 Changed PgaD-like protein
PGAMP PF07644 Family 4 5 34.60 48 35.45 Changed Planctomycete PGAMP
PGAP1 PF07819 Family 19 793 175.70 21 23.83 Changed PGAP1-like protein
PgaPase_1 PF06162 Domain 6 32 147.90 36 68.74 Changed Putative pyroglutamyl peptidase PgaPase_1
PGA_cap PF09587 Domain 118 952 244.40 26 59.07 Changed Bacterial capsule synthesis protein PGA_cap
PGBA_C PF15437 Family 2 3 81.00 64 24.45 Changed Plasminogen-binding protein pgbA C-terminal
PGBA_N PF15436 Family 20 26 212.60 30 76.29 Changed Plasminogen-binding protein pgbA N-terminal
PGC7_Stella PF15549 Family 18 79 147.00 36 84.07 Changed PGC7/Stella/Dppa3 domain
PGDH_C PF16896 Domain 17 37 155.30 52 55.40 Changed Phosphogluconate dehydrogenase (decarboxylating) C-term
PGDYG PF14083 Family 7 21 100.40 65 70.34 Changed PGDYG protein
PGG PF13962 Domain 187 2635 109.70 26 31.58 Changed Domain of unknown function
PGI PF00342 Domain 7 2449 378.20 31 81.71 Changed Phosphoglucose isomerase
PGK PF00162 Domain 933 2529 365.90 44 91.04 Changed Phosphoglycerate kinase
PglL_A PF15864 Domain 39 89 25.90 40 4.50 Changed Protein glycosylation ligase
PglZ PF08665 Domain 10 291 181.00 25 26.73 Changed PglZ domain
PGM_PMM_I PF02878 Domain 79 6340 129.90 26 26.26 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II PF02879 Domain 63 5430 104.40 26 20.10 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III PF02880 Domain 443 5521 117.20 22 22.64 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV PF00408 Family 63 5249 81.70 19 16.08 Changed Phosphoglucomutase/phosphomannomutase, C-terminal domain
PgpA PF04608 Family 171 699 145.50 27 85.78 Changed Phosphatidylglycerophosphatase A
PGPGW PF09656 Family 21 174 51.90 36 34.73 Changed Putative transmembrane protein (PGPGW)
PGP_phosphatase PF09419 Family 15 358 155.90 29 66.96 Changed Mitochondrial PGP phosphatase
PG_binding_1 PF01471 Domain 206 5767 56.50 25 15.56 Changed Putative peptidoglycan binding domain
PG_binding_2 PF08823 Domain 9 58 68.70 26 23.82 Changed Putative peptidoglycan binding domain
PG_binding_3 PF09374 Domain 7 169 73.10 29 34.39 Changed Predicted Peptidoglycan domain
PG_binding_4 PF12229 Domain 54 878 114.20 14 29.95 Changed Putative peptidoglycan binding domain
PH PF00169 Domain 112 21417 104.40 17 13.36 Changed PH domain
Ph1570 PF09638 Domain 2 5 121.40 57 98.70 Changed Ph1570 protein
PHA-1 PF06542 Family 9 124 337.70 28 73.71 Changed Regulator protein PHA-1
PhaC_N PF07167 Family 29 389 169.70 42 28.63 Changed Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
Phage-A118_gp45 PF10653 Family 1 1 62.00 100 100.00 Changed Protein gp45 of Bacteriophage A118
Phage-Gp8 PF09215 Domain 2 2 329.50 43 97.34 Changed Bacteriophage T4, Gp8
Phage-MuB_C PF09077 Domain 16 24 76.50 35 24.95 Changed Mu B transposition protein, C terminal
Phage-scaffold PF09306 Domain 2 5 290.20 42 98.24 Changed Bacteriophage, scaffolding protein
Phage-tail_1 PF09097 Domain 1 1 196.00 100 50.13 Changed Baseplate structural protein, domain 1
Phage-tail_2 PF09096 Domain 1 1 173.00 100 44.25 Changed Baseplate structural protein, domain 2
Phage-tail_3 PF13550 Domain 51 231 164.60 18 14.30 Changed Putative phage tail protein
PhageMin_Tail PF10145 Family 250 542 211.00 17 20.28 Changed Phage-related minor tail protein
PhageP22-tail PF09251 Domain 2 2 549.00 59 90.22 Changed Salmonella phage P22 tail-spike
Phageshock_PspD PF09584 Family 9 28 60.40 51 74.90 Changed Phage shock protein PspD (Phageshock_PspD)
Phageshock_PspG PF09583 Family 17 40 63.30 56 77.88 Changed Phage shock protein G (Phageshock_PspG)
Phage_1_1 PF08200 Family 6 2 40.50 52 75.70 Changed Bacteriophage 1.1 Protein
Phage_30_3 PF08010 Family 3 8 139.00 33 74.58 Changed Bacteriophage protein GP30.3
Phage_30_8 PF06019 Family 2 1 110.00 100 100.00 Changed Phage GP30.8 protein
Phage_AlpA PF05930 Family 14 510 50.50 31 63.96 Changed Prophage CP4-57 regulatory protein (AlpA)
Phage_antitermQ PF06530 Family 1 42 118.40 35 87.57 Changed Phage antitermination protein Q
Phage_antiter_Q PF06323 Family 6 15 199.40 32 96.36 Changed Phage antitermination protein Q
Phage_ASH PF10554 Family 17 32 103.80 26 49.60 Changed Ash protein family
Phage_attach PF05354 Domain 3 4 111.20 41 95.91 Changed Phage Head-Tail Attachment
Phage_B PF02304 Family 1 1 117.00 100 97.50 Changed Scaffold protein B
Phage_base_V PF04717 Family 24 174 108.90 29 50.59 Changed Type VI secretion system, phage-baseplate injector
Phage_BR0599 PF09356 Family 78 120 78.10 35 27.19 Changed Phage conserved hypothetical protein BR0599
Phage_C PF12025 Family 1 2 63.00 100 79.75 Changed Phage protein C
Phage_capsid PF05065 Family 75 665 266.90 17 67.87 Changed Phage capsid family
Phage_Capsid_P3 PF09018 Domain 1 1 394.00 100 99.75 Changed P3 major capsid protein
Phage_cap_E PF03864 Family 73 183 317.00 16 91.67 Changed Phage major capsid protein E
Phage_cap_P2 PF05125 Family 46 89 315.70 37 93.11 Changed Phage major capsid protein, P2 family
Phage_CII PF05269 Family 3 18 86.90 23 87.18 Changed Bacteriophage CII protein
Phage_CI_C PF16452 Domain 15 36 101.80 31 48.61 Changed Bacteriophage CI repressor C-terminal domain
Phage_CI_repr PF07022 Domain 12 198 63.50 24 31.86 Changed Bacteriophage CI repressor helix-turn-helix domain
Phage_clamp_A PF16790 Domain 2 3 128.00 25 78.53 Changed Bacteriophage clamp loader A subunit
Phage_coat PF09063 Domain 2 0 0.00 0 0.00 Changed Phage PP7 coat protein
Phage_Coat_A PF05357 Domain 3 2 69.00 22 32.55 Changed Phage Coat Protein A
Phage_Coat_B PF05356 Family 2 2 79.50 34 96.95 Changed Phage Coat protein B
Phage_Coat_Gp8 PF05371 Family 7 4 53.50 33 70.16 Changed Phage major coat protein, Gp8
Phage_connector PF05352 Family 4 4 256.50 21 51.17 Changed Phage Connector (GP10)
Phage_connect_1 PF05135 Domain 40 358 88.20 18 74.31 Changed Phage gp6-like head-tail connector protein
Phage_Cox PF10743 Family 6 12 84.50 34 75.17 Changed Regulatory phage protein cox
Phage_CP76 PF06892 Family 12 49 146.90 27 92.00 Changed Phage regulatory protein CII (CP76)
Phage_CRI PF05144 Family 13 22 229.20 18 63.35 Changed Phage replication protein CRI
Phage_DNA_bind PF02303 Domain 8 11 83.90 29 85.62 Changed Helix-destabilising protein
Phage_DsbA PF11126 Family 2 2 67.00 40 74.86 Changed Transcriptional regulator DsbA
Phage_endo_I PF05367 Domain 6 4 142.20 42 97.93 Changed Phage endonuclease I
Phage_F PF02305 Domain 7 21 259.10 28 96.80 Changed Capsid protein (F protein)
Phage_fiber PF03335 Repeat 17 53 13.40 40 11.93 Changed Phage tail fibre repeat
Phage_fiber_2 PF03406 Repeat 45 141 40.40 39 9.73 Changed Phage tail fibre repeat
Phage_fiber_C PF06820 Family 2 2 59.50 30 46.67 Changed Putative prophage tail fibre C-terminus
Phage_FRD3 PF05798 Family 1 1 75.00 100 100.00 Changed Bacteriophage FRD3 protein
Phage_G PF02306 Domain 1 2 175.00 99 100.00 Changed Major spike protein (G protein)
Phage_glycop_gL PF11108 Family 5 6 104.00 30 68.27 Changed Viral glycoprotein L
Phage_Gp111 PF07410 Family 1 1 93.00 100 66.43 Changed Streptococcus thermophilus bacteriophage Gp111 protein
Phage_Gp15 PF06854 Family 22 72 148.50 23 84.96 Changed Bacteriophage Gp15 protein
Phage_Gp19 PF09355 Domain 8 23 108.90 26 80.08 Changed Phage protein Gp19/Gp15/Gp42
Phage_GP20 PF06810 Family 21 102 143.00 21 75.58 Changed Phage minor structural protein GP20
Phage_Gp23 PF10669 Family 1 2 119.50 21 17.07 Changed Protein gp23 (Bacteriophage A118)
Phage_gp49_66 PF13876 Family 19 33 83.50 34 48.79 Changed Phage protein (N4 Gp49/phage Sf6 gene 66) family
Phage_gp53 PF11246 Family 2 3 159.70 22 83.60 Changed Base plate wedge protein 53
Phage_GPA PF05840 Family 11 107 322.60 33 52.30 Changed Bacteriophage replication gene A protein (GPA)
Phage_GPD PF05954 Family 89 1186 281.30 17 42.01 Changed Phage late control gene D protein (GPD)
Phage_GPL PF05926 Family 41 82 131.40 30 85.77 Changed Phage head completion protein (GPL)
Phage_GPO PF05929 Family 31 89 252.70 32 95.29 Changed Phage capsid scaffolding protein (GPO) serine peptidase
Phage_head_chap PF11113 Family 10 2 51.50 23 48.13 Changed Head assembly gene product
Phage_head_fibr PF11133 Family 3 15 132.00 21 90.83 Changed Head fiber protein
Phage_HK97_TLTM PF06120 Family 4 25 252.70 17 23.93 Changed Tail length tape measure protein
Phage_holin_1 PF04531 Family 25 64 77.10 28 77.81 Changed Bacteriophage holin
Phage_holin_2_1 PF04971 Family 1 18 67.20 58 95.35 Changed Bacteriophage P21 holin S
Phage_holin_2_2 PF10746 Family 3 7 54.40 40 78.56 Changed Phage holin T7 family, holin superfamily II
Phage_holin_2_3 PF16080 Family 14 43 56.70 29 74.47 Changed Bacteriophage holin family HP1
Phage_holin_2_4 PF16082 Family 5 12 75.80 28 88.95 Changed Bacteriophage holin family, superfamily II-like
Phage_holin_3_1 PF05106 Family 36 69 98.80 26 88.94 Changed Phage holin family (Lysis protein S)
Phage_holin_3_2 PF04550 Family 13 22 84.20 49 87.61 Changed Phage holin family 2
Phage_holin_3_3 PF16083 Family 47 56 78.10 20 71.65 Changed LydA holin phage, holin superfamily III
Phage_holin_3_5 PF16085 Family 3 9 112.30 65 93.27 Changed Bacteriophage holin Hol, superfamily III
Phage_holin_3_6 PF07332 Domain 323 692 111.50 20 75.95 Changed Putative Actinobacterial Holin-X, holin superfamily III
Phage_holin_3_7 PF05449 Domain 23 33 80.30 30 83.60 Changed Putative 3TM holin, Phage_holin_3
Phage_holin_4_1 PF05105 Family 151 317 115.50 28 80.14 Changed Bacteriophage holin family
Phage_holin_4_2 PF04020 Family 526 795 107.60 30 69.23 Changed Mycobacterial 4 TMS phage holin, superfamily IV
Phage_holin_5_1 PF06946 Family 2 27 86.90 32 96.54 Changed Bacteriophage A118-like holin, Hol118
Phage_holin_5_2 PF16079 Family 67 91 72.00 31 78.77 Changed Phage holin family Hol44, in holin superfamily V
Phage_holin_6_1 PF09682 Family 16 48 99.90 20 83.14 Changed Bacteriophage holin of superfamily 6 (Holin_LLH)
Phage_holin_7_1 PF16081 Family 2 2 127.00 21 94.42 Changed Mycobacterial 2 TMS Phage Holin (M2 Hol) Family
Phage_holin_8 PF16931 Family 14 39 116.50 28 94.85 Changed Putative phage holin
Phage_holin_Dp1 PF16938 Family 10 24 61.80 41 86.97 Changed Putative phage holin Dp-1
Phage_holin_T PF11031 Family 2 2 214.50 31 98.39 Changed Bacteriophage T holin
Phage_hub_GP28 PF11110 Family 1 2 125.50 29 15.72 Changed Baseplate hub distal subunit
Phage_H_T_join PF05521 Family 122 333 96.50 19 86.28 Changed Phage head-tail joining protein
Phage_integrase PF00589 Family 24 13242 169.40 19 48.70 Changed Phage integrase family
Phage_Integr_2 PF13009 Family 14 24 308.20 28 33.42 Changed Putative phage integrase
Phage_integr_3 PF16795 Domain 10 35 153.90 26 55.42 Changed Archaeal phage integrase
Phage_integ_N PF09003 Domain 12 43 67.90 32 21.00 Changed Bacteriophage lambda integrase, N-terminal domain
Phage_int_SAM_1 PF02899 Domain 30 3491 83.40 22 26.52 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_2 PF12834 Domain 9 86 87.60 25 29.14 Changed Phage integrase, N-terminal
Phage_int_SAM_3 PF14659 Domain 74 1511 57.20 20 15.14 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4 PF13495 Domain 41 959 84.30 18 27.16 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_5 PF13102 Domain 193 1052 151.10 17 39.40 Changed Phage integrase SAM-like domain
Phage_lambda_P PF06992 Family 1 26 195.30 25 87.87 Changed Replication protein P
Phage_lysis PF03245 Domain 10 80 127.10 27 79.49 Changed Bacteriophage Rz lysis protein
Phage_lysozyme PF00959 Domain 14 547 112.20 23 50.94 Changed Phage lysozyme
Phage_mat-A PF03863 Family 2 2 388.50 25 95.45 Changed Phage maturation protein
Phage_min_cap2 PF06152 Family 26 108 309.90 20 70.67 Changed Phage minor capsid protein 2
Phage_min_tail PF05939 Family 39 62 106.90 29 85.50 Changed Phage minor tail protein
Phage_Mu_F PF04233 Family 13 415 116.60 19 28.84 Changed Phage Mu protein F like protein
Phage_Mu_Gam PF07352 Family 56 83 148.30 22 82.18 Changed Bacteriophage Mu Gam like protein
Phage_Mu_Gp45 PF06890 Family 27 72 155.50 28 66.48 Changed Bacteriophage Mu Gp45 protein
Phage_NinH PF06322 Family 3 5 60.60 49 90.18 Changed Phage NinH protein
Phage_Nu1 PF07471 Family 4 37 129.10 24 70.32 Changed Phage DNA packaging protein Nu1
Phage_Orf51 PF06194 Family 2 3 80.00 96 98.36 Changed Phage Conserved Open Reading Frame 51
Phage_P2_GpE PF06528 Family 20 50 36.50 50 84.58 Changed Phage P2 GpE
Phage_P2_GpU PF06995 Family 104 183 119.90 28 66.66 Changed Phage P2 GpU
Phage_portal PF04860 Family 309 678 309.50 19 76.02 Changed Phage portal protein
Phage_portal_2 PF05136 Family 96 172 342.50 26 67.57 Changed Phage portal protein, lambda family
Phage_pRha PF09669 Family 118 251 85.80 26 38.08 Changed Phage regulatory protein Rha (Phage_pRha)
Phage_prot_Gp6 PF05133 Family 53 284 400.40 13 88.77 Changed Phage portal protein, SPP1 Gp6-like
Phage_r1t_holin PF16945 Family 9 52 66.40 35 67.20 Changed Putative lactococcus lactis phage r1t holin
Phage_rep_O PF04492 Family 22 47 95.30 27 31.65 Changed Bacteriophage replication protein O
Phage_rep_org_N PF09681 Family 19 117 119.00 30 44.46 Changed N-terminal phage replisome organiser (Phage_rep_org_N)
Phage_RpbA PF10789 Family 8 1 111.00 100 86.05 Changed Phage RNA polymerase binding, RpbA
Phage_sheath_1 PF04984 Family 41 811 342.20 15 88.56 Changed Phage tail sheath protein
Phage_SSB PF16773 Domain 1 1 112.00 100 98.25 Changed Lactococcus phage single-stranded DNA binding protein
Phage_stabilise PF11134 Family 4 7 462.70 41 98.84 Changed Phage stabilisation protein
Phage_T4_gp19 PF06841 Family 67 420 137.60 25 87.65 Changed T4-like virus tail tube protein gp19
Phage_T4_Gp30_7 PF06919 Family 1 1 121.00 100 100.00 Changed Phage Gp30.7 protein
Phage_T4_gp36 PF03903 Family 1 4 136.00 16 22.19 Changed Phage T4 tail fibre
Phage_T4_Ndd PF06591 Family 2 1 151.00 100 100.00 Changed T4-like phage nuclear disruption protein (Ndd)
Phage_T7_Capsid PF05396 Family 6 5 112.20 26 42.18 Changed Phage T7 capsid assembly protein
Phage_T7_tail PF03906 Family 3 15 127.20 21 30.94 Changed Phage T7 tail fibre protein
Phage_TAC_1 PF06222 Family 6 8 124.80 46 95.69 Changed Phage tail assembly chaperone
Phage_TAC_10 PF10963 Family 14 25 82.00 35 86.82 Changed Phage tail assembly chaperone
Phage_TAC_11 PF11836 Family 60 87 97.30 28 81.19 Changed Phage tail tube protein, GTA-gp10
Phage_TAC_12 PF12363 Family 14 29 109.50 22 83.91 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_13 PF16459 Family 23 7 108.30 29 73.31 Changed Phage tail assembly chaperone, TAC
Phage_TAC_14 PF16462 Family 3 7 113.00 46 95.88 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_2 PF06894 Family 4 7 125.30 40 72.36 Changed Bacteriophage lambda tail assembly chaperone, TAC, protein G
Phage_TAC_3 PF06896 Family 5 11 116.60 22 92.64 Changed Phage tail assembly chaperone proteins, TAC
Phage_TAC_4 PF08748 Domain 16 23 112.40 26 96.74 Changed Phage tail assembly chaperone
Phage_TAC_5 PF08890 Family 49 112 128.20 22 91.42 Changed Phage XkdN-like tail assembly chaperone protein, TAC
Phage_TAC_6 PF09550 Family 18 53 55.60 37 76.32 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_7 PF10109 Family 50 190 82.50 21 71.81 Changed Phage tail assembly chaperone proteins, E, or 41 or 14
Phage_TAC_8 PF10666 Family 1 2 141.50 34 97.59 Changed Phage tail assembly chaperone protein Gp14 ()A118
Phage_TAC_9 PF10876 Family 4 6 131.30 32 93.70 Changed Phage tail assemb.y chaperone protein, TAC
Phage_tail_2 PF06199 Family 30 145 131.90 23 86.06 Changed Phage tail tube protein
Phage_tail_3 PF08813 Family 11 31 151.80 23 77.84 Changed Phage tail tube protein, TTP
Phage_tail_APC PF16778 Domain 29 45 63.00 37 44.68 Changed Phage tail assembly chaperone protein
Phage_tail_L PF05100 Family 5 65 207.00 37 84.92 Changed Phage minor tail protein L
phage_tail_N PF08400 Family 3 19 120.30 38 21.26 Changed Prophage tail fibre N-terminal
Phage_tail_NK PF16532 Domain 1 1 153.00 100 88.95 Changed Sf6-type phage tail needle knob or tip of some Caudovirales
Phage_tail_S PF05069 Family 23 240 139.00 19 89.80 Changed Phage virion morphogenesis family
Phage_tail_T PF06223 Family 5 6 99.00 49 62.92 Changed Minor tail protein T
Phage_tail_U PF06141 Family 11 12 130.00 38 97.50 Changed Phage minor tail protein U
Phage_tail_X PF05489 Domain 9 169 58.80 32 65.93 Changed Phage Tail Protein X
Phage_terminase PF10668 Domain 3 45 62.80 29 26.80 Changed Phage terminase small subunit
Phage_term_sma PF07141 Family 2 0 0.00 0 0.00 Changed Putative bacteriophage terminase small subunit
Phage_term_smal PF05944 Family 43 77 131.00 33 54.26 Changed Phage small terminase subunit
Phage_Treg PF04761 Family 2 2 56.50 61 96.58 Changed Lactococcus bacteriophage putative transcription regulator
Phage_TTP_1 PF04630 Family 14 45 176.60 16 86.31 Changed Phage tail tube protein
Phage_TTP_11 PF16460 Family 2 8 127.50 32 84.79 Changed Phage tail tube, TTP, lambda-like
Phage_TTP_12 PF16461 Family 1 7 140.40 68 59.98 Changed Lambda phage tail tube protein, TTP
Phage_TTP_13 PF16463 Family 2 6 137.00 73 90.43 Changed Phage tail tube protein family
Phage_tube PF04985 Family 102 183 162.90 28 94.59 Changed Phage tail tube protein FII
Phage_X PF05155 Family 8 21 82.20 25 22.40 Changed Phage X family
Phage_XkdX PF09693 Family 38 76 38.40 29 77.67 Changed Phage uncharacterised protein (Phage_XkdX)
PhaG_MnhG_YufB PF03334 Family 483 706 81.20 31 68.46 Changed Na+/H+ antiporter subunit
PhaP_Bmeg PF09602 Family 4 9 157.80 28 92.27 Changed Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)
Phasin PF05597 Family 36 88 120.80 30 68.11 Changed Poly(hydroxyalcanoate) granule associated protein (phasin)
Phasin_2 PF09361 Domain 247 495 98.30 17 61.39 Changed Phasin protein
PHAT PF09246 Domain 4 24 109.50 40 12.05 Changed PHAT
PHA_gran_rgn PF09650 Family 47 98 90.80 25 89.95 Changed Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)
PHA_synth_III_E PF09712 Family 19 74 201.30 20 72.46 Changed Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
PHBC_N PF12551 Family 62 98 42.70 43 7.18 Changed Poly-beta-hydroxybutyrate polymerase N terminal
PHB_acc PF05233 Domain 102 269 39.90 35 28.09 Changed PHB accumulation regulatory domain
PHB_acc_N PF07879 Domain 75 239 60.50 56 32.18 Changed PHB/PHA accumulation regulator DNA-binding domain
PHB_depo_C PF06850 Family 11 228 201.10 49 46.92 Changed PHB de-polymerase C-terminus
PHC2_SAM_assoc PF16616 Disordered 15 145 112.70 49 13.13 Changed Unstructured region on Polyhomeotic-like protein 1 and 2
PHD PF00628 Domain 74 10858 50.10 30 5.89 Changed PHD-finger
PHD20L1_u1 PF16660 Disordered 2 51 96.00 87 10.40 Changed PHD finger protein 20-like protein 1
PhdYeFM_antitox PF02604 Domain 80 2119 69.20 17 77.24 Changed Antitoxin Phd_YefM, type II toxin-antitoxin system
PHD_2 PF13831 Family 26 1728 35.50 46 3.44 Changed PHD-finger
PHD_3 PF13922 Domain 8 207 64.70 55 4.41 Changed PHD domain of transcriptional enhancer, Asx
PHD_4 PF16866 Domain 30 339 65.60 48 6.44 Changed PHD-finger
PHD_like PF12910 Domain 7 25 138.00 27 96.05 Changed Antitoxin of toxin-antitoxin, RelE / RelB, TA system
PHD_Oberon PF07227 Family 41 353 124.60 35 19.50 Changed PHD - plant homeodomain finger protein
Phenol_Hydrox PF02332 Domain 87 194 226.70 24 52.90 Changed Methane/Phenol/Toluene Hydroxylase
Phenol_hyd_sub PF06099 Family 17 32 56.60 46 65.67 Changed Phenol hydroxylase subunit
Phenol_MetA_deg PF13557 Family 149 496 232.20 13 73.69 Changed Putative MetA-pathway of phenol degradation
Phenol_monoox PF04663 Family 18 36 65.40 43 55.61 Changed Phenol hydroxylase conserved region
Phenyl_P_gamma PF09662 Family 2 2 83.00 71 98.22 Changed Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma)
Pheromone PF08015 Family 38 27 56.10 25 96.50 Changed Fungal mating-type pheromone
Phe_hydrox_dim PF07976 Family 263 634 167.00 23 26.36 Changed Phenol hydroxylase, C-terminal dimerisation domain
Phe_tRNA-synt_N PF02912 Domain 907 1559 68.70 30 19.99 Changed Aminoacyl tRNA synthetase class II, N-terminal domain
Phe_ZIP PF08916 Domain 37 201 56.10 48 9.35 Changed Phenylalanine zipper
PHF12_MRG_bd PF16737 Domain 18 101 39.60 59 4.45 Changed PHD finger protein 12 MRG binding domain
PHF5 PF03660 Family 42 399 101.20 73 88.28 Changed PHF5-like protein
Phg_2220_C PF09524 Domain 33 60 72.20 40 26.85 Changed Conserved phage C-terminus (Phg_2220_C)
Phi-29_GP16_7 PF06720 Family 1 1 130.00 100 100.00 Changed Bacteriophage phi-29 early protein GP16.7
Phi-29_GP3 PF05435 Family 1 1 266.00 100 100.00 Changed Phi-29 DNA terminal protein GP3
Phi-29_GP4 PF05464 Family 1 1 125.00 100 100.00 Changed Phi-29-like late genes activator (early protein GP4)
phiKZ_IP PF12699 Family 14 6 329.00 14 69.41 Changed phiKZ-like phage internal head proteins
PHINT_rpt PF14882 Repeat 21 70 45.10 30 22.20 Changed Phage-integrase repeat unit
Phi_1 PF04674 Family 101 443 225.50 43 83.23 Changed Phosphate-induced protein 1 conserved region
Phlebovirus_G1 PF07243 Family 4 3 389.70 18 45.12 Changed Phlebovirus glycoprotein G1
Phlebovirus_G2 PF07245 Family 4 65 312.00 24 22.10 Changed Phlebovirus glycoprotein G2
Phlebovirus_NSM PF07246 Family 3 2 75.50 0 12.61 Changed Phlebovirus nonstructural protein NS-M
PHM7_cyt PF14703 Domain 211 1955 171.40 19 21.20 Changed Cytosolic domain of 10TM putative phosphate transporter
PHM7_ext PF12621 Family 167 470 93.30 28 9.56 Changed Extracellular tail, of 10TM putative phosphate transporter
PhnA PF03831 Domain 157 585 68.10 58 56.02 Changed PhnA domain
PhnA_Zn_Ribbon PF08274 Domain 30 445 31.50 52 25.86 Changed PhnA Zinc-Ribbon
PhnG PF06754 Family 97 150 141.70 34 92.31 Changed Phosphonate metabolism protein PhnG
PhnH PF05845 Family 101 158 184.80 32 93.83 Changed Bacterial phosphonate metabolism protein (PhnH)
PhnI PF05861 Family 71 156 347.60 53 96.48 Changed Bacterial phosphonate metabolism protein (PhnI)
PhnJ PF06007 Family 47 153 268.90 64 92.75 Changed Phosphonate metabolism protein PhnJ
PHO4 PF01384 Family 960 3026 293.50 23 84.98 Changed Phosphate transporter family
Pho86 PF11124 Family 29 42 287.00 36 91.83 Changed Inorganic phosphate transporter Pho86
Pho88 PF10032 Family 95 271 176.90 38 89.69 Changed Phosphate transport (Pho88)
PhoD PF09423 Domain 87 1161 324.80 21 55.50 Changed PhoD-like phosphatase
PhoD_N PF16655 Domain 134 645 97.90 35 16.54 Changed PhoD-like phosphatase, N-terminal domain
PhoH PF02562 Domain 130 2066 204.70 45 54.63 Changed PhoH-like protein
PhoLip_ATPase_C PF16212 Family 674 3309 231.80 29 19.65 Changed Phospholipid-translocating P-type ATPase C-terminal
PhoLip_ATPase_N PF16209 Family 283 2996 68.40 36 5.71 Changed Phospholipid-translocating ATPase N-terminal
PhoPQ_related PF10142 Family 17 118 308.60 27 67.14 Changed PhoPQ-activated pathogenicity-related protein
PhoQ_Sensor PF08918 Domain 20 48 171.50 53 35.87 Changed PhoQ Sensor
Phosducin PF02114 Domain 2 899 195.40 22 75.88 Changed Phosducin
Phosphatase PF15698 Family 23 63 251.30 53 95.40 Changed Phosphatase
PhosphMutase PF10143 Family 290 456 169.80 33 41.04 Changed 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Phosphodiest PF01663 Family 67 3729 272.00 15 45.70 Changed Type I phosphodiesterase / nucleotide pyrophosphatase
Phosphoesterase PF04185 Family 20 1223 317.40 22 60.30 Changed Phosphoesterase family
Phospholamban PF04272 Domain 2 39 52.00 89 97.08 Changed Phospholamban
Phospholip_A2_1 PF00068 Domain 145 840 107.20 31 56.00 Changed Phospholipase A2
Phospholip_A2_2 PF05826 Family 106 391 90.20 33 34.61 Changed Phospholipase A2
Phospholip_A2_3 PF09056 Domain 64 150 106.10 35 43.74 Changed Prokaryotic phospholipase A2
Phospholip_B PF04916 Domain 22 430 424.50 30 87.31 Changed Phospholipase B
Phosphonate-bd PF12974 Family 108 1260 241.90 18 64.78 Changed ABC transporter, phosphonate, periplasmic substrate-binding protein
Phosphoprotein PF00922 Family 1 2 187.00 21 84.62 Changed Vesiculovirus phosphoprotein
Phosphorylase PF00343 Family 602 2579 507.00 32 76.20 Changed Carbohydrate phosphorylase
Phospho_p8 PF10195 Family 30 128 55.40 44 60.56 Changed DNA-binding nuclear phosphoprotein p8
Phostensin PF13914 Domain 13 114 120.50 48 21.37 Changed Phostensin PP1-binding and SH3-binding region
Phostensin_N PF13916 Domain 8 74 79.40 43 14.48 Changed PP1-regulatory protein, Phostensin N-terminal
Phos_pyr_kin PF08543 Family 122 2965 230.10 26 71.82 Changed Phosphomethylpyrimidine kinase
Photo_RC PF00124 Family 42 508 247.00 47 82.77 Changed Photosynthetic reaction centre protein
PhoU PF01895 Domain 254 4596 87.40 21 48.41 Changed PhoU domain
PhoU_div PF01865 Family 7 718 205.00 21 94.04 Changed Protein of unknown function DUF47
PHP PF02811 Family 595 5193 208.40 16 28.20 Changed PHP domain
PHP_C PF13263 Domain 100 475 52.00 25 19.01 Changed PHP-associated
PHR PF08005 Domain 81 649 144.40 38 14.19 Changed PHR domain
PhrC_PhrF PF11131 Family 2 2 37.50 46 94.94 Changed Rap-phr extracellular signalling
PHTB1_C PF14728 Family 28 188 299.60 33 42.60 Changed PTHB1 C-terminus
PHTB1_N PF14727 Family 38 207 331.00 35 49.89 Changed PTHB1 N-terminus
PHtD_u1 PF16645 Disordered 4 3 63.30 56 7.49 Changed Unstructured region on Pneumococcal histidine triad protein
Phtf-FEM1B_bdg PF12129 Domain 23 203 137.30 57 20.12 Changed Male germ-cell putative homeodomain transcription factor
PHY PF00360 Family 32 586 174.80 26 17.34 Changed Phytochrome region
Phycobilisome PF00502 Domain 148 635 141.60 30 62.54 Changed Phycobilisome protein
Phycoerythr_ab PF02972 Family 5 0 0.00 0 0.00 Changed Phycoerythrin, alpha/beta chain
PhyH PF05721 Domain 39 2855 206.00 15 63.77 Changed Phytanoyl-CoA dioxygenase (PhyH)
Phytase PF02333 Domain 3 210 290.60 27 54.39 Changed Phytase
Phytase-like PF13449 Domain 295 652 304.50 19 56.94 Changed Esterase-like activity of phytase
Phyto-Amp PF15438 Family 1 2 154.00 38 80.84 Changed Antigenic membrane protein of phytoplasma
Phytochelatin PF05023 Domain 83 235 194.50 39 53.14 Changed Phytochelatin synthase
Phytochelatin_C PF09328 Family 17 86 198.30 47 50.90 Changed Domain of unknown function (DUF1984)
Phytoreo_P8 PF07124 Family 2 2 423.50 52 100.00 Changed Phytoreovirus outer capsid protein P8
Phytoreo_Pns PF05451 Family 2 2 350.00 38 98.73 Changed Phytoreovirus nonstructural protein Pns10/11
Phytoreo_S7 PF07236 Family 2 2 494.50 34 99.40 Changed Phytoreovirus S7 protein
Phyto_Pns9_10 PF05878 Family 2 2 314.50 30 93.74 Changed Phytoreovirus nonstructural protein Pns9/Pns10
PHZA_PHZB PF03284 Domain 4 11 151.90 44 93.67 Changed Phenazine biosynthesis protein A/B
PhzC-PhzF PF02567 Family 11 1580 245.90 26 90.32 Changed Phenazine biosynthesis-like protein
PH_10 PF15411 Domain 141 346 121.70 31 12.46 Changed Pleckstrin homology domain
PH_11 PF15413 Domain 7 223 120.00 33 16.08 Changed Pleckstrin homology domain
PH_12 PF16457 Domain 61 853 125.70 28 14.91 Changed Pleckstrin homology domain
PH_13 PF16652 Domain 13 262 143.90 46 11.22 Changed Pleckstrin homology domain
PH_2 PF08458 Family 57 290 100.40 40 25.86 Changed Plant pleckstrin homology-like region
PH_3 PF14593 Family 27 251 102.30 42 19.20 Changed PH domain
PH_4 PF15404 Domain 36 121 162.10 35 15.43 Changed Pleckstrin homology domain
PH_5 PF15405 Domain 36 394 138.70 29 10.75 Changed Pleckstrin homology domain
PH_6 PF15406 Domain 12 107 108.00 49 19.74 Changed Pleckstrin homology domain
PH_8 PF15409 Domain 11 472 88.80 43 10.11 Changed Pleckstrin homology domain
PH_9 PF15410 Domain 16 1171 112.90 32 7.38 Changed Pleckstrin homology domain
PH_BEACH PF14844 Domain 33 1174 94.00 25 3.84 Changed PH domain associated with Beige/BEACH
PH_TFIIH PF08567 Domain 101 347 86.80 32 14.91 Changed TFIIH p62 subunit, N-terminal domain
PI-PLC-C1 PF16670 Domain 50 114 272.10 29 71.45 Changed Phosphoinositide phospholipase C, Ca2+-dependent
PI-PLC-X PF00388 Family 110 2679 146.30 38 16.63 Changed Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 Family 359 2272 114.00 39 11.75 Changed Phosphatidylinositol-specific phospholipase C, Y domain
PI31_Prot_C PF08577 Family 75 283 77.80 38 23.86 Changed PI31 proteasome regulator
PI31_Prot_N PF11566 Family 105 407 142.70 22 40.39 Changed PI31 proteasome regulator N-terminal
PI3Ka PF00613 Family 12 1643 180.00 25 14.32 Changed Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3K_1B_p101 PF10486 Family 17 259 394.20 23 86.96 Changed Phosphoinositide 3-kinase gamma adapter protein p101 subunit
PI3K_C2 PF00792 Domain 17 1048 139.60 23 12.81 Changed Phosphoinositide 3-kinase C2
PI3K_p85B PF02192 Family 50 303 74.90 48 7.58 Changed PI3-kinase family, p85-binding domain
PI3K_P85_iSH2 PF16454 Domain 31 321 156.10 59 27.75 Changed Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
PI3K_rbd PF00794 Family 12 658 105.40 25 8.64 Changed PI3-kinase family, ras-binding domain
PI3_PI4_kinase PF00454 Family 41 5590 208.70 22 13.98 Changed Phosphatidylinositol 3- and 4-kinase
Picorna_P3A PF06363 Family 1 2 92.50 29 4.29 Changed Picornaviridae P3A protein
Pico_P1A PF02226 Family 2 2 68.00 59 3.11 Changed Picornavirus coat protein (VP4)
Pico_P2A PF00947 Domain 9 2 126.50 43 5.79 Changed Picornavirus core protein 2A
Pico_P2B PF01552 Family 2 3 86.00 32 5.82 Changed Picornavirus 2B protein
PID PF00640 Domain 17 3075 128.70 20 21.81 Changed Phosphotyrosine interaction domain (PTB/PID)
PID_2 PF14719 Domain 9 251 163.70 34 48.94 Changed Phosphotyrosine interaction domain (PTB/PID)
PIEZO PF15917 Family 48 275 200.10 38 10.14 Changed Piezo
Piezo_RRas_bdg PF12166 Family 101 479 328.10 34 20.02 Changed Piezo non-specific cation channel, R-Ras-binding domain
PIF PF05092 Family 4 8 419.10 20 74.91 Changed Per os infectivity
PIF1 PF05970 Family 13 3758 176.90 18 33.34 Changed PIF1-like helicase
PIG-F PF06699 Family 87 349 178.80 28 67.41 Changed GPI biosynthesis protein family Pig-F
PIG-H PF10181 Family 105 329 68.80 34 28.64 Changed GPI-GlcNAc transferase complex, PIG-H component
PIG-L PF02585 Family 70 2295 137.20 24 41.11 Changed GlcNAc-PI de-N-acetylase
PIG-P PF08510 Family 153 387 127.00 32 46.72 Changed PIG-P
PIG-S PF10510 Family 106 451 422.50 25 86.32 Changed Phosphatidylinositol-glycan biosynthesis class S protein
PIG-U PF06728 Family 56 483 318.50 30 83.63 Changed GPI transamidase subunit PIG-U
PIG-X PF08320 Domain 106 371 191.40 23 53.40 Changed PIG-X / PBN1
PIG-Y PF15159 Family 31 112 68.50 31 50.08 Changed Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PIGA PF08288 Family 22 412 88.70 57 19.15 Changed PIGA (GPI anchor biosynthesis)
Pigment_DH PF06324 Family 2 23 17.90 83 17.93 Changed Pigment-dispersing hormone (PDH)
PigN PF04987 Family 177 469 382.30 27 47.56 Changed Phosphatidylinositolglycan class N (PIG-N)
PIH1 PF08190 Family 15 729 202.70 15 58.41 Changed pre-RNA processing PIH1/Nop17
Pik1 PF11522 Family 19 115 50.50 46 5.23 Changed Yeast phosphatidylinositol-4-OH kinase Pik1
Pil1 PF13805 Family 26 406 247.80 46 57.90 Changed Eisosome component PIL1
PilI PF10623 Family 2 0 0.00 0 0.00 Changed Plasmid conjugative transfer protein PilI
Pilin PF00114 Domain 141 264 113.40 20 68.40 Changed Pilin (bacterial filament)
Pilin_GH PF16734 Family 49 126 116.30 23 59.64 Changed Type IV pilin-like G and H, putative
Pilin_PilA PF14245 Family 7 14 115.60 33 54.09 Changed Type IV pilin PilA
Pilin_PilX PF11530 Family 2 4 125.80 44 77.62 Changed Minor type IV pilin, PilX
PilJ PF13675 Domain 92 510 106.60 17 22.05 Changed Type IV pili methyl-accepting chemotaxis transducer N-term
PilM PF07419 Family 10 22 137.80 21 79.76 Changed PilM
PilM_2 PF11104 Family 19 666 269.40 19 76.48 Changed Type IV pilus assembly protein PilM;
PilN PF05137 Family 141 533 83.10 20 33.33 Changed Fimbrial assembly protein (PilN)
PilO PF04350 Family 52 353 142.60 22 66.61 Changed Pilus assembly protein, PilO
PilP PF04351 Family 119 221 142.70 28 77.88 Changed Pilus assembly protein, PilP
PilS PF08805 Domain 6 74 137.80 18 62.55 Changed PilS N terminal
Pilt PF15453 Family 9 121 161.20 35 51.73 Changed Protein incorporated later into Tight Junctions
Pilus_CpaD PF09476 Family 46 80 191.60 25 84.89 Changed Pilus biogenesis CpaD protein (pilus_cpaD)
PilW PF16074 Family 58 197 130.00 19 39.57 Changed Type IV Pilus-assembly protein W
PilX PF13681 Domain 60 82 116.00 18 57.54 Changed Type IV pilus assembly protein PilX C-term
PilX_N PF14341 Family 48 165 50.90 32 21.40 Changed PilX N-terminal
PilZ PF07238 Domain 190 2523 102.30 15 37.72 Changed PilZ domain
PilZ_2 PF16823 Domain 5 22 137.30 30 73.73 Changed Atypical PilZ domain, cyclic di-GMP receptor
Pim PF16765 Family 2 4 93.00 22 64.47 Changed Pesticin immunity protein
PIN PF01850 Domain 111 3673 121.90 16 86.60 Changed PIN domain
Pinin_SDK_memA PF04696 Family 106 360 119.80 29 28.34 Changed pinin/SDK/memA/ protein conserved region
Pinin_SDK_N PF04697 Family 6 109 123.70 51 21.41 Changed pinin/SDK conserved region
PINIT PF14324 Domain 166 572 145.10 35 24.25 Changed PINIT domain
PIN_2 PF10130 Domain 12 62 121.20 23 90.42 Changed PIN domain
PIN_3 PF13470 Domain 63 692 111.20 20 72.82 Changed PIN domain
PIN_4 PF13638 Domain 107 1719 140.10 22 20.34 Changed PIN domain
PIN_5 PF08745 Family 40 65 204.30 41 93.21 Changed PINc domain ribonuclease
PIN_6 PF17146 Family 305 542 86.50 36 22.25 New PIN domain of ribonuclease
PIP49_C PF12260 Family 34 504 186.40 26 47.40 Changed Protein-kinase domain of FAM69
PIP49_N PF14875 Domain 28 227 138.70 34 34.80 Changed N-term cysteine-rich ER, FAM69
PIP5K PF01504 Family 393 2472 257.70 29 28.89 Changed Phosphatidylinositol-4-phosphate 5-Kinase
PipA PF07108 Family 2 3 188.30 83 90.54 Changed PipA protein
PIR PF00399 Repeat 50 911 17.30 67 20.21 Changed Yeast PIR protein repeat
Pirin PF02678 Family 38 2317 107.20 35 37.47 Changed Pirin
Pirin_C PF05726 Domain 30 1500 104.30 27 34.03 Changed Pirin C-terminal cupin domain
PIRT PF15099 Family 5 41 130.00 72 92.58 Changed Phosphoinositide-interacting protein family
PITH PF06201 Domain 335 818 145.30 31 53.99 Changed PITH domain
Piwi PF02171 Family 17 2600 264.70 33 34.58 Changed Piwi domain
PixA PF12306 Family 22 29 166.60 21 91.29 Changed Inclusion body protein
PK PF00224 Family 11 3454 316.10 39 66.46 Changed Pyruvate kinase, barrel domain
PKcGMP_CC PF16808 Domain 10 74 33.90 50 7.39 Changed Coiled-coil N-terminus of cGMP-dependent protein kinase
PKD PF00801 Domain 42 3984 69.30 24 13.04 Changed PKD domain
PKD_2 PF16407 Family 13 112 160.50 20 30.37 Changed PKD-like family
PKD_3 PF16820 Family 13 64 65.40 25 18.91 Changed PKD-like domain
PKD_channel PF08016 Family 12 1399 271.40 19 24.97 Changed Polycystin cation channel
PKI PF02827 Family 29 178 66.10 41 69.35 Changed cAMP-dependent protein kinase inhibitor
pKID PF02173 Family 9 311 40.80 58 13.55 Changed pKID domain
Pkinase PF00069 Domain 38 125183 239.50 21 39.00 Changed Protein kinase domain
Pkinase_C PF00433 Family 515 3860 43.50 32 6.40 Changed Protein kinase C terminal domain
Pkinase_Tyr PF07714 Domain 123 36628 232.50 24 35.13 Changed Protein tyrosine kinase
Pkip-1 PF06878 Family 19 1 159.00 100 94.64 Changed Pkip-1 protein
PKK PF12474 Family 78 515 135.30 34 23.49 Changed Polo kinase kinase
PknG_rubred PF16919 Domain 16 102 122.90 40 15.70 Changed Protein kinase G rubredoxin domain
PknG_TPR PF16918 Family 17 144 319.70 34 42.36 Changed Protein kinase G tetratricopeptide repeat
PknH_C PF14032 Domain 76 143 184.10 17 69.19 Changed PknH-like extracellular domain
Pkr1 PF08636 Family 81 204 72.70 42 38.02 Changed ER protein Pkr1
PK_C PF02887 Domain 751 3100 115.70 27 23.30 Changed Pyruvate kinase, alpha/beta domain
PL48 PF15903 Family 17 277 295.00 50 33.30 Changed Filopodia upregulated, FAM65
PLA1 PF02253 Domain 86 253 244.10 31 73.42 Changed Phospholipase A1
PLA2G12 PF06951 Family 8 195 164.40 42 75.70 Changed Group XII secretory phospholipase A2 precursor (PLA2G12)
PLA2_B PF01735 Family 15 1127 344.00 25 55.55 Changed Lysophospholipase catalytic domain
PLA2_inh PF02988 Domain 5 60 79.70 38 39.48 Changed Phospholipase A2 inhibitor
PLAC PF08686 Domain 115 818 32.30 39 2.98 Changed PLAC (protease and lacunin) domain
PLAC8 PF04749 Family 358 1584 103.30 27 45.29 Changed PLAC8 family
PLAC9 PF15205 Family 8 39 66.70 63 75.00 Changed Placenta-specific protein 9
Planc_extracel PF07595 Motif 22 22 23.90 36 0.97 Changed Planctomycete extracellular
Plant_all_beta PF10532 Domain 10 62 103.70 35 26.69 Changed Plant specific N-all beta domain
Plant_NMP1 PF06694 Family 5 63 250.60 50 84.46 Changed Plant nuclear matrix protein 1 (NMP1)
Plant_tran PF04827 Family 5 1893 99.40 39 36.96 Changed Plant transposon protein
Plant_vir_prot PF01307 Family 9 10 100.30 30 80.95 Changed Plant viral movement protein
Plant_zn_clust PF10533 Domain 44 267 46.40 49 14.83 Changed Plant zinc cluster domain
Plasmid_parti PF01672 Family 40 18 85.50 35 42.68 Changed Putative plasmid partition protein
Plasmid_RAQPRD PF09686 Family 29 84 77.20 40 67.74 Changed Plasmid protein of unknown function (Plasmid_RAQPRD)
Plasmid_stab_B PF10784 Family 11 10 70.20 27 56.39 Changed Plasmid stability protein
Plasmodium_HRP PF05403 Disordered 3 4 148.20 66 93.53 Changed Plasmodium histidine-rich protein (HRPII/III)
Plasmodium_Vir PF05795 Family 43 357 276.90 11 82.71 Changed Plasmodium vivax Vir protein
Plasmod_dom_1 PF09715 Family 7 19 65.10 37 35.46 Changed Plasmodium protein of unknown function (Plasmod_dom_1)
Plasmod_MYXSPDY PF07981 Repeat 6 70 17.00 79 97.70 Changed Plasmodium repeat_MYXSPDY
Plasmod_Pvs28 PF06247 Domain 40 45 43.10 26 67.77 Changed Pvs28 EGF domain
PLAT PF01477 Domain 84 3926 110.30 22 18.29 Changed PLAT/LH2 domain
PLATZ PF04640 Family 80 525 72.60 51 30.67 Changed PLATZ transcription factor
PLC-beta_C PF08703 Domain 16 235 157.70 42 14.58 Changed PLC-beta C terminal
PLCC PF14466 Domain 4 7 124.70 50 81.28 Changed PLAT/LH2 and C2-like Ca2+-binding lipoprotein
PLDc PF00614 Family 30 1726 30.10 42 4.04 Changed Phospholipase D Active site motif
PLDc_2 PF13091 Domain 84 6935 140.70 18 33.59 Changed PLD-like domain
PLDc_3 PF13918 Domain 2 317 170.90 40 36.91 Changed PLD-like domain
PLDc_N PF13396 Domain 776 1620 44.10 25 12.84 Changed Phospholipase_D-nuclease N-terminal
PLD_C PF12357 Family 121 416 71.50 45 9.36 Changed Phospholipase D C terminal
Plectin PF00681 Repeat 431 3609 40.10 34 8.80 Changed Plectin repeat
Plexin_cytopl PF08337 Domain 60 969 435.60 46 31.97 Changed Plexin cytoplasmic RasGAP domain
PliI PF16743 Domain 8 17 113.60 33 63.94 Changed Periplasmic lysozyme inhibitor of I-type lysozyme
PLN_propep PF16485 Domain 17 54 41.70 34 11.65 Changed Protealysin propeptide
PLRV_ORF5 PF01690 Family 2 6 295.70 27 65.87 Changed Potato leaf roll virus readthrough protein
PLU-1 PF08429 Family 108 627 305.40 25 21.75 Changed PLU-1-like protein
Plug PF07715 Domain 636 15908 110.00 21 12.77 Changed TonB-dependent Receptor Plug Domain
Plug_translocon PF10559 Domain 137 749 34.50 58 7.34 Changed Plug domain of Sec61p
Plus-3 PF03126 Domain 210 696 103.00 28 14.79 Changed Plus-3 domain
PM0188 PF11477 Family 3 3 378.70 33 93.04 Changed Sialyltransferase PMO188
PMAIP1 PF15150 Family 7 23 49.60 60 77.20 Changed Phorbol-12-myristate-13-acetate-induced
PmbA_TldD PF01523 Family 1298 2095 293.00 20 63.29 Changed Putative modulator of DNA gyrase
PMBR PF09373 Repeat 49 83 32.40 28 9.76 Changed Pseudomurein-binding repeat
PMC2NT PF08066 Domain 155 374 90.00 27 11.02 Changed PMC2NT (NUC016) domain
PMD PF10536 Domain 64 1668 190.20 21 41.06 Changed Plant mobile domain
PMEI PF04043 Domain 737 2449 146.40 17 43.17 Changed Plant invertase/pectin methylesterase inhibitor
PMG PF05287 Family 11 292 147.90 32 91.13 Changed PMG protein
PMI_typeI PF01238 Family 8 1504 272.50 23 76.93 Changed Phosphomannose isomerase type I
PMM PF03332 Family 9 605 201.10 47 83.76 Changed Eukaryotic phosphomannomutase
PmoA PF14100 Family 101 134 277.80 24 70.68 Changed Methane oxygenase PmoA
PMP1_2 PF08114 Family 2 27 38.10 48 47.07 Changed ATPase proteolipid family
PMP22_Claudin PF00822 Family 13 2554 165.20 24 74.47 Changed PMP-22/EMP/MP20/Claudin family
Pmp3 PF01679 Family 362 1241 48.50 43 48.88 Changed Proteolipid membrane potential modulator
PMR5N PF14416 Domain 429 1698 54.20 42 12.62 Changed PMR5 N terminal Domain
PmrD PF11183 Family 4 11 79.40 32 83.06 Changed Polymyxin resistance protein PmrD
PMSI1 PF15322 Family 13 34 254.20 59 84.19 Changed Protein missing in infertile sperm 1, putative
PMSR PF01625 Family 731 2506 149.20 40 67.48 Changed Peptide methionine sulfoxide reductase
PMT PF02366 Family 19 1406 226.10 26 33.15 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_2 PF13231 Family 41 2812 159.20 16 28.31 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_4TMC PF16192 Family 427 1186 198.80 26 27.58 Changed C-terminal four TMM region of protein-O-mannosyltransferase
PMT_C PF11647 Family 13 22 65.70 30 2.72 Changed C-terminal region of Pasteurella multocida toxin residues 569-1285
Pneumovirus_M2 PF06436 Family 2 3 155.30 51 82.33 Changed Pneumovirus matrix protein 2 (M2)
Pneumo_att_G PF05539 Family 3 0 0.00 0 0.00 Changed Pneumovirinae attachment membrane glycoprotein G
Pneumo_M2 PF07380 Family 1 1 89.00 100 98.89 Changed Pneumovirus M2 protein
Pneumo_matrix PF03393 Family 2 3 252.00 54 98.95 Changed Pneumovirus matrix protein
Pneumo_ncap PF03246 Family 2 3 391.30 58 99.58 Changed Pneumovirus nucleocapsid protein
Pneumo_NS1 PF03438 Family 1 1 136.00 100 97.84 Changed Pneumovirus NS1 protein
Pneumo_phosprot PF02478 Family 2 3 263.70 43 95.42 Changed Pneumovirus phosphoprotein
PNGaseA PF12222 Family 22 357 370.20 29 65.21 Changed Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNISR PF15996 Family 28 207 154.00 30 22.11 Changed Arginine/serine-rich protein PNISR
PNK3P PF08645 Family 26 602 156.50 29 39.94 Changed Polynucleotide kinase 3 phosphatase
PNKP-ligase_C PF16536 Domain 32 103 60.00 70 7.09 Changed PNKP adenylyltransferase domain, C-terminal region
PNKP_ligase PF16542 Domain 67 116 307.10 48 37.43 Changed PNKP adenylyltransferase domain, ligase domain
PNMA PF14893 Family 33 291 248.60 27 52.11 Changed PNMA
PNPase PF03726 Domain 18 1655 81.70 26 11.22 Changed Polyribonucleotide nucleotidyltransferase, RNA binding domain
PNPase_C PF12111 Domain 22 57 36.80 48 3.46 Changed Polyribonucleotide phosphorylase C terminal
PNPOx_C PF10590 Domain 583 1136 44.00 49 18.35 Changed Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
PNP_UDP_1 PF01048 Domain 114 6778 236.80 16 66.60 Changed Phosphorylase superfamily
PNRC PF15365 Family 25 303 64.60 35 25.66 Changed Proline-rich nuclear receptor coactivator
PNTB PF02233 Family 335 1006 436.80 47 70.20 Changed NAD(P) transhydrogenase beta subunit
PNTB_4TM PF12769 Family 226 915 85.40 51 17.05 Changed 4TM region of pyridine nucleotide transhydrogenase, mitoch
POC1 PF10450 Family 3 37 237.80 27 98.29 Changed POC1 chaperone
POC3_POC4 PF10448 Family 18 68 145.00 20 96.32 Changed 20S proteasome chaperone assembly proteins 3 and 4
PocR PF10114 Domain 222 394 158.20 21 30.71 Changed Sensory domain found in PocR
Podoplanin PF05808 Family 13 70 149.50 31 67.99 Changed Podoplanin
Podovirus_Gp16 PF05894 Family 1 2 327.00 29 91.09 Changed Podovirus DNA encapsidation protein (Gp16)
PolC_DP2 PF03833 Family 69 101 852.70 45 71.71 Changed DNA polymerase II large subunit DP2
Pollen_allerg_1 PF01357 Domain 343 1799 78.60 34 31.78 Changed Pollen allergen
Pollen_allerg_2 PF01620 Family 2 17 113.40 51 47.53 Changed Ribonuclease (pollen allergen)
Pollen_Ole_e_I PF01190 Family 98 965 90.00 23 36.72 Changed Pollen proteins Ole e I like
POLO_box PF00659 Family 248 1029 66.50 25 16.90 Changed POLO box duplicated region
PolyA_pol PF01743 Domain 17 2691 125.50 31 26.11 Changed Poly A polymerase head domain
PolyA_pol_arg_C PF12626 Domain 162 305 122.90 35 26.19 Changed Polymerase A arginine-rich C-terminus
PolyA_pol_RNAbd PF12627 Domain 222 2353 62.90 25 13.22 Changed Probable RNA and SrmB- binding site of polymerase A
PolyG_pol PF01518 Family 4 3 345.70 24 97.10 Changed Sigma NS protein
Polyhedrin PF00738 Family 3 3 232.00 49 94.05 Changed Polyhedrin
Polyketide_cyc PF03364 Family 95 1796 130.00 17 60.50 Changed Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc2 PF10604 Family 122 2759 142.90 14 81.50 Changed Polyketide cyclase / dehydrase and lipid transport
Polyoma_agno PF01736 Family 1 1 62.00 100 100.00 Changed Polyomavirus agnoprotein
Polyoma_coat PF00718 Domain 1 1 293.00 100 80.94 Changed Polyomavirus coat protein
Polyoma_coat2 PF00761 Family 8 1 322.00 100 91.48 Changed Polyomavirus coat protein
Polyoma_lg_T_C PF06431 Family 3 1 435.00 100 61.44 Changed Polyomavirus large T antigen C-terminus
polyprenyl_synt PF00348 Domain 505 5452 243.30 25 70.93 Changed Polyprenyl synthetase
Polysacc_deac_1 PF01522 Family 80 6415 131.00 20 36.79 Changed Polysaccharide deacetylase
Polysacc_deac_2 PF04748 Family 241 347 210.80 29 60.72 Changed Divergent polysaccharide deacetylase
Polysacc_deac_3 PF15421 Family 5 9 376.20 50 88.87 Changed Putative polysaccharide deacetylase
Polysacc_lyase PF14099 Family 49 168 226.90 17 63.76 Changed Polysaccharide lyase
Polysacc_synt PF01943 Family 18 2731 280.40 14 58.22 Changed Polysaccharide biosynthesis protein
Polysacc_synt_2 PF02719 Family 66 1330 278.80 42 54.35 Changed Polysaccharide biosynthesis protein
Polysacc_synt_3 PF13440 Family 23 1124 288.40 17 61.00 Changed Polysaccharide biosynthesis protein
Polysacc_synt_4 PF04669 Family 27 616 141.80 29 64.35 Changed Polysaccharide biosynthesis
Polysacc_synt_C PF14667 Family 322 2548 131.30 16 26.85 Changed Polysaccharide biosynthesis C-terminal domain
Polysacc_syn_2C PF08485 Family 95 151 48.00 48 14.07 Changed Polysaccharide biosynthesis protein C-terminal
Poly_export PF02563 Family 660 1462 85.80 25 21.99 Changed Polysaccharide biosynthesis/export protein
Pol_alpha_B_N PF08418 Family 84 323 200.50 21 34.15 Changed DNA polymerase alpha subunit B N-terminal
POM121 PF15229 Family 37 268 181.00 33 29.06 Changed POM121 family
Pombe_5TM PF09437 Family 2 8 120.00 34 85.26 Changed Pombe specific 5TM protein
Ponericin PF07442 Family 3 0 0.00 0 0.00 Changed Ponericin
POP1 PF06978 Family 78 599 118.40 24 20.50 Changed Ribonucleases P/MRP protein subunit POP1
Popeye PF04831 Family 39 295 219.60 35 61.13 Changed Popeye protein conserved region
POPLD PF08170 Domain 163 406 94.90 31 11.24 Changed POPLD (NUC188) domain
POR PF01558 Family 86 3048 175.50 22 28.12 Changed Pyruvate ferredoxin/flavodoxin oxidoreductase
PorB PF11565 Family 3 12 106.20 25 74.00 Changed Alpha helical Porin B
Porin_1 PF00267 Domain 11 220 323.50 42 91.91 Changed Gram-negative porin
Porin_10 PF14121 Family 99 158 620.00 25 89.81 Changed Putative porin
Porin_2 PF02530 Family 16 178 350.80 20 87.28 Changed Porin subfamily
Porin_3 PF01459 Family 73 1565 249.60 22 85.20 Changed Eukaryotic porin
Porin_4 PF13609 Domain 109 1461 330.70 20 89.65 Changed Gram-negative porin
Porin_5 PF16930 Family 23 96 339.00 23 81.91 Changed Putative porin
Porin_6 PF16939 Family 3 4 284.00 37 78.24 Changed Putative porin
Porin_7 PF16956 Family 4 40 198.30 21 93.12 Changed Putative general bacterial porin
Porin_8 PF16966 Family 10 30 301.40 43 82.08 Changed Porin-like glycoporin RafY
Porin_OmpG PF09381 Family 1 6 301.70 40 94.71 Changed Outer membrane protein G (OmpG)
Porin_OmpG_1_2 PF16946 Family 5 3 241.70 18 76.64 Changed Putative OMPG-porin 1 family
Porin_OmpL1 PF11389 Family 1 5 240.40 36 76.61 Changed Leptospira porin protein OmpL1
Porin_O_P PF07396 Family 22 581 293.40 13 72.31 Changed Phosphate-selective porin O and P
Porphobil_deam PF01379 Domain 795 1745 205.60 42 61.87 Changed Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC PF03900 Domain 16 1648 73.80 30 22.04 Changed Porphobilinogen deaminase, C-terminal domain
Porph_ging PF09697 Family 29 263 49.00 44 18.35 Changed Protein of unknown function (Porph_ging)
PORR PF11955 Family 116 572 284.10 30 73.90 Changed Plant organelle RNA recognition domain
POR_N PF01855 Family 31 2774 221.80 25 30.51 Changed Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
Post_transc_reg PF13797 Family 27 94 80.30 26 83.33 Changed Post-transcriptional regulator
POT1 PF02765 Domain 47 398 133.60 20 16.16 Changed Telomeric single stranded DNA binding POT1/CDC13
POT1PC PF16686 Domain 91 271 148.40 24 23.72 Changed ssDNA-binding domain of telomere protection protein
Potassium_chann PF11404 Family 2 80 27.10 73 4.32 Changed Potassium voltage-gated channel
Potass_KdpF PF09604 Family 89 161 24.00 41 52.90 Changed F subunit of K+-transporting ATPase (Potass_KdpF)
potato_inhibit PF00280 Domain 170 503 62.00 40 67.97 Changed Potato inhibitor I family
Potex_coat PF06184 Family 2 0 0.00 0 0.00 Changed Potexvirus coat protein
POTRA PF07244 Family 246 4239 79.30 19 31.39 Changed Surface antigen variable number repeat
POTRA_1 PF08478 Family 87 1182 69.30 21 24.49 Changed POTRA domain, FtsQ-type
POTRA_2 PF08479 Family 50 706 75.70 24 12.75 Changed POTRA domain, ShlB-type
Potyvirid-P3 PF13608 Family 3 4 378.00 31 14.23 Changed Protein P3 of Potyviral polyprotein
Poty_coat PF00767 Family 4 6 231.30 27 7.46 Changed Potyvirus coat protein
Poty_PP PF08440 Family 5 6 269.00 21 8.68 Changed Potyviridae polyprotein
Pou PF00157 Domain 40 1239 69.00 60 16.68 Changed Pou domain - N-terminal to homeobox domain
POX PF07526 Domain 129 489 126.70 37 23.17 Changed Associated with HOX
Poxvirus PF06227 Family 37 39 156.40 18 92.65 Changed dsDNA Poxvirus
Poxvirus_B22R PF04395 Family 12 14 198.50 25 11.14 Changed Poxvirus B22R protein
Poxvirus_B22R_C PF13168 Family 14 16 194.70 43 10.19 Changed Poxvirus B22R protein C-terminal
Poxvirus_B22R_N PF13169 Family 12 13 89.50 26 4.68 Changed Poxvirus B22R protein N-terminal
Pox_A11 PF05061 Family 7 15 244.70 40 97.76 Changed Poxvirus A11 Protein
Pox_A12 PF04651 Family 3 14 133.70 39 94.45 Changed Poxvirus A12 protein
Pox_A14 PF05767 Family 7 11 91.50 49 98.43 Changed Poxvirus virion envelope protein A14
Pox_A21 PF05323 Family 10 12 110.80 45 98.52 Changed Poxvirus A21 Protein
Pox_A22 PF04848 Family 9 15 152.70 39 81.47 Changed Poxvirus A22 protein
Pox_A28 PF04584 Family 10 12 141.10 48 99.53 Changed Poxvirus A28 family
Pox_A30L_A26L PF06086 Family 2 9 191.70 24 37.19 Changed Orthopoxvirus A26L/A30L protein
Pox_A31 PF05771 Family 4 6 111.70 38 88.74 Changed Poxvirus A31 protein
Pox_A32 PF04665 Domain 8 883 191.60 46 77.87 Changed Poxvirus A32 protein
Pox_A3L PF05288 Family 9 11 70.10 48 93.80 Changed Poxvirus A3L Protein
Pox_A51 PF04948 Family 4 7 327.00 37 99.70 Changed Poxvirus A51 protein
Pox_A6 PF04924 Family 9 14 313.00 37 92.58 Changed Poxvirus A6 protein
Pox_A8 PF04745 Family 8 12 273.80 46 91.08 Changed VITF-3 subunit protein
Pox_A9 PF04835 Family 8 12 53.40 46 58.97 Changed A9 protein conserved region
Pox_Ag35 PF03286 Family 8 9 201.00 40 99.61 Changed Pox virus Ag35 surface protein
Pox_ATPase-GT PF10640 Domain 10 12 312.80 45 36.65 Changed mRNA capping enzyme N-terminal, ATPase and guanylyltransferase
Pox_A_type_inc PF04508 Repeat 11 29 22.40 39 8.12 Changed Viral A-type inclusion protein repeat
Pox_C4_C10 PF03336 Family 5 10 310.40 29 93.27 Changed Poxvirus C4/C10 protein
Pox_C7_F8A PF03287 Family 10 11 152.40 36 83.26 Changed Poxvirus C7/F8A protein
Pox_D2 PF04701 Family 8 11 134.90 34 91.83 Changed Pox virus D2 protein
Pox_D3 PF04580 Family 7 10 228.60 31 90.64 Changed Chordopoxvirinae D3 protein
Pox_D5 PF03288 Domain 37 398 91.30 25 23.80 Changed Poxvirus D5 protein-like
Pox_E10 PF04805 Family 9 12 69.80 58 72.24 Changed E10-like protein conserved region
Pox_E2-like PF04497 Family 14 30 559.20 17 92.89 Changed Poxviridae protein
Pox_E6 PF04656 Family 9 11 566.60 54 99.98 Changed Pox virus E6 protein
Pox_E8 PF03394 Family 8 11 240.40 61 75.48 Changed Poxvirus E8 protein
Pox_EPC_I2-L1 PF12575 Family 7 11 69.90 43 96.73 Changed Poxvirus entry protein complex L1 and I2
Pox_F11 PF04943 Family 3 7 343.90 24 79.60 Changed Poxvirus F11 protein
Pox_F12L PF03337 Family 8 11 630.70 31 97.94 Changed Poxvirus F12L protein
Pox_F15 PF04596 Family 8 10 136.70 49 87.68 Changed Poxvirus protein F15
Pox_F16 PF04708 Family 6 9 207.30 34 92.33 Changed Poxvirus F16 protein
Pox_F17 PF04767 Family 9 11 96.70 50 92.68 Changed DNA-binding 11 kDa phosphoprotein
Pox_G5 PF04599 Family 8 13 393.30 32 97.52 Changed Poxvirus G5 protein
Pox_G7 PF05503 Family 8 13 305.20 41 97.93 Changed Poxvirus G7-like
Pox_G9-A16 PF03003 Family 30 38 127.40 25 44.51 Changed Pox virus entry-fusion-complex G9/A16
Pox_H7 PF04787 Family 9 11 143.20 37 97.89 Changed Late protein H7
Pox_I1 PF03289 Family 9 11 306.70 59 98.22 Changed Poxvirus protein I1
Pox_I3 PF04661 Family 8 11 259.30 43 94.94 Changed Poxvirus I3 ssDNA-binding protein
Pox_I5 PF04713 Family 8 11 75.00 40 94.94 Changed Poxvirus protein I5
Pox_I6 PF04595 Family 13 13 319.80 34 84.65 Changed Poxvirus I6-like family
Pox_int_trans PF05718 Family 9 12 371.80 48 97.51 Changed Poxvirus intermediate transcription factor
Pox_J1 PF03338 Family 9 11 146.50 44 94.60 Changed Poxvirus J1 protein
Pox_L3_FP4 PF03339 Family 6 12 307.80 42 92.72 Changed Poxvirus L3/FP4 protein
Pox_L5 PF04872 Family 8 11 78.90 36 60.36 Changed Poxvirus L5 protein family
Pox_LP_H2 PF03356 Family 10 12 187.90 54 91.78 Changed Viral late protein H2
Pox_M2 PF04887 Family 3 5 193.60 51 88.48 Changed Poxvirus M2 protein
Pox_MCEL PF03291 Family 10 668 261.10 27 66.31 Changed mRNA capping enzyme
Pox_mRNA-cap PF03341 Family 7 11 285.90 64 98.84 Changed Poxvirus mRNA capping enzyme, small subunit
Pox_P21 PF05313 Family 8 11 186.70 41 96.30 Changed Poxvirus P21 membrane protein
Pox_P35 PF03213 Family 7 11 315.90 34 98.95 Changed Poxvirus P35 protein
Pox_P4A PF03395 Family 3 11 885.00 48 98.33 Changed Poxvirus P4A protein
Pox_P4B PF03292 Family 7 14 622.40 41 95.09 Changed Poxvirus P4B major core protein
Pox_polyA_pol PF03296 Domain 7 12 149.20 60 31.03 Changed Poxvirus poly(A) polymerase nucleotidyltransferase domain
Pox_polyA_pol_C PF12629 Domain 10 12 204.20 47 42.49 Changed Poxvirus poly(A) polymerase C-terminal domain
Pox_polyA_pol_N PF12630 Domain 9 11 107.40 52 22.73 Changed Poxvirus poly(A) polymerase N-terminal domain
Pox_Rap94 PF03294 Family 9 13 737.90 49 99.97 Changed RNA polymerase-associated transcription specificity factor, Rap94
Pox_Rif PF03340 Family 8 12 544.70 57 98.78 Changed Poxvirus rifampicin resistance protein
Pox_RNA_pol PF03293 Family 9 11 160.00 62 97.24 Changed Poxvirus DNA-directed RNA polymerase, 18 kD subunit
Pox_RNA_Pol_19 PF05320 Family 9 11 165.10 53 100.00 Changed Poxvirus DNA-directed RNA polymerase 19 kDa subunit
Pox_RNA_Pol_22 PF05273 Family 8 11 183.50 60 98.83 Changed Poxvirus RNA polymerase 22 kDa subunit
Pox_RNA_pol_35 PF03396 Family 9 11 291.60 50 96.11 Changed Poxvirus DNA-directed RNA polymerase, 35 kD subunit
Pox_ser-thr_kin PF05445 Family 8 12 435.20 54 96.60 Changed Poxvirus serine/threonine protein kinase
Pox_T4_C PF04490 Family 3 3 148.70 42 63.44 Changed Poxvirus T4 protein, C terminus
Pox_T4_N PF04491 Family 3 4 46.80 48 23.97 Changed Poxvirus T4 protein, N terminus
Pox_TAA1 PF03295 Family 8 11 62.80 58 41.40 Changed Poxvirus trans-activator protein A1 C-terminal
Pox_TAP PF03355 Family 5 11 259.80 73 99.79 Changed Viral Trans-Activator Protein
Pox_VERT_large PF04441 Family 9 12 705.20 59 97.23 Changed Poxvirus early transcription factor (VETF), large subunit
Pox_vIL-18BP PF05566 Family 2 3 125.30 44 96.66 Changed Orthopoxvirus interleukin 18 binding protein
Pox_VLTF3 PF04947 Family 14 27 166.50 28 57.85 Changed Poxvirus Late Transcription Factor VLTF3 like
Pox_VP8_L4R PF04498 Family 7 11 216.70 54 86.00 Changed Poxvirus nucleic acid binding protein VP8/L4R
PP-binding PF00550 Domain 154 21333 66.40 22 6.47 Changed Phosphopantetheine attachment site
PP-binding_2 PF14573 Domain 2 11 86.90 35 53.62 Changed Acyl-carrier
PP1 PF07430 Domain 6 1 75.00 100 51.72 Changed Phloem filament protein PP1 cystatin-like domain
PP1c_bdg PF10488 Domain 7 151 175.60 33 35.95 Changed Phosphatase-1 catalytic subunit binding region
PP1_bind PF15276 Family 16 125 59.70 49 3.79 Changed Protein phosphatase 1 binding
PP1_inhibitor PF05361 Family 7 268 108.30 37 78.69 Changed PKC-activated protein phosphatase-1 inhibitor
PP2 PF14299 Family 241 777 157.60 27 60.60 Changed Phloem protein 2
PP28 PF10252 Domain 96 329 84.50 50 39.72 Changed Casein kinase substrate phosphoprotein PP28
PP2C PF00481 Family 28 8508 219.10 21 48.53 Changed Protein phosphatase 2C
PP2C_2 PF13672 Family 38 2237 220.80 18 61.62 Changed Protein phosphatase 2C
PP2C_C PF07830 Domain 47 294 76.90 48 19.50 Changed Protein serine/threonine phosphatase 2C, C-terminal domain
PPAK PF02818 Motif 39 352 26.80 63 0.84 Changed PPAK motif
PPARgamma_N PF12577 Family 11 74 80.60 72 17.66 Changed PPAR gamma N-terminal region
PPC PF04151 Domain 93 696 71.20 22 11.06 Changed Bacterial pre-peptidase C-terminal domain
PPDFL PF15060 Family 23 109 96.80 47 93.89 Changed Differentiation and proliferation regulator
PPDK_N PF01326 Family 114 3545 226.50 23 37.77 Changed Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PPE PF00823 Family 116 487 152.60 38 28.54 Changed PPE family
PPI_Ypi1 PF07491 Family 100 418 61.20 42 38.29 Changed Protein phosphatase inhibitor
PPK2 PF03976 Domain 10 1378 227.50 35 81.39 Changed Polyphosphate kinase 2 (PPK2)
PPO1_DWL PF12142 Domain 48 180 51.20 46 9.55 Changed Polyphenol oxidase middle domain
PPO1_KFDV PF12143 Domain 32 186 120.70 34 23.73 Changed Protein of unknown function (DUF_B2219)
PPP1R26_N PF15740 Family 19 82 505.30 33 75.58 Changed Protein phosphatase 1 regulatory subunit 26 N-terminus
PPP1R32 PF15691 Family 15 82 296.50 38 91.93 Changed Protein phosphatase 1 regulatory subunit 32
PPP1R35_C PF15503 Family 18 75 134.00 30 53.52 Changed Protein phosphatase 1 regulatory subunit 35 C-terminus
PPP4R2 PF09184 Family 29 369 261.90 18 64.79 Changed PPP4R2
PPP5 PF08321 Family 141 574 89.10 31 16.45 Changed PPP5 TPR repeat region
PPPI_inhib PF14895 Family 22 108 296.50 32 75.60 Changed Protein phosphatase 1 inhibitor
PPR PF01535 Family 459 49054 29.20 21 15.45 Changed PPR repeat
PPR_1 PF12854 Repeat 201 4322 33.00 30 6.76 Changed PPR repeat
PPR_2 PF13041 Repeat 249 54016 49.20 26 27.03 Changed PPR repeat family
PPR_3 PF13812 Repeat 7 5334 58.70 19 11.53 Changed Pentatricopeptide repeat domain
PPR_long PF17177 Domain 11 1756 155.50 17 24.75 New Pentacotripeptide-repeat region of PROPR
PPTA PF01239 Repeat 851 3502 27.40 29 22.86 Changed Protein prenyltransferase alpha subunit repeat
Pput2613-deam PF14427 Family 4 1 119.00 100 5.78 Changed Pput_2613-like deaminase
PPV_E1_C PF00519 Family 11 49 236.00 36 55.49 Changed Papillomavirus helicase
PPV_E1_N PF00524 Family 7 15 120.90 28 21.45 Changed E1 Protein, N terminal domain
PPV_E2_C PF00511 Domain 15 15 79.10 34 19.08 Changed E2 (early) protein, C terminal
PPV_E2_N PF00508 Family 13 15 198.60 37 47.92 Changed E2 (early) protein, N terminal
Ppx-GppA PF02541 Family 10 1896 286.20 22 66.71 Changed Ppx/GppA phosphatase family
PP_kinase PF02503 Domain 684 1160 202.60 29 28.29 Changed Polyphosphate kinase middle domain
PP_kinase_C PF13090 Domain 558 1181 344.50 46 48.69 Changed Polyphosphate kinase C-terminal domain
PP_kinase_N PF13089 Domain 661 1155 106.10 40 14.84 Changed Polyphosphate kinase N-terminal domain
PP_M1 PF03012 Family 5 5 296.40 59 99.33 Changed Phosphoprotein
PQ-loop PF04193 Repeat 220 4454 59.40 21 33.67 Changed PQ loop repeat
PqiA PF04403 Family 312 708 149.80 24 56.46 Changed Paraquat-inducible protein A
PQQ PF01011 Repeat 71 992 36.00 25 8.13 Changed PQQ enzyme repeat
PqqA PF08042 Family 39 94 18.90 46 57.44 Changed PqqA family
PqqD PF05402 Family 465 781 70.00 19 55.34 Changed Coenzyme PQQ synthesis protein D (PqqD)
PQQ_2 PF13360 Domain 54 4633 170.30 13 42.25 Changed PQQ-like domain
PQQ_3 PF13570 Repeat 724 1141 41.20 25 13.37 Changed PQQ-like domain
PRA-CH PF01502 Family 684 1639 74.20 49 28.33 Changed Phosphoribosyl-AMP cyclohydrolase
PRA-PH PF01503 Family 43 1720 88.00 31 34.73 Changed Phosphoribosyl-ATP pyrophosphohydrolase
PRA1 PF03208 Family 182 1029 138.70 23 64.92 Changed PRA1 family protein
PRAI PF00697 Domain 18 1567 191.50 29 65.20 Changed N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PRANC PF09372 Domain 34 58 96.00 21 19.22 Changed PRANC domain
PRAP PF15314 Family 24 46 44.50 47 32.71 Changed Proline-rich acidic protein 1, pregnancy-specific uterine
PRAS PF15798 Family 10 92 116.10 43 34.74 Changed Proline-rich AKT1 substrate 1
PRC PF05239 Domain 114 3079 76.60 18 44.53 Changed PRC-barrel domain
PrcB_C PF14343 Family 164 202 58.20 28 28.52 Changed PrcB C-terminal
PRCC PF10253 Family 80 337 232.10 19 57.73 Changed Mitotic checkpoint regulator, MAD2B-interacting
PRCH PF03967 Family 26 31 133.60 43 51.21 Changed Photosynthetic reaction centre, H-chain N-terminal region
PRD PF00874 Domain 171 2623 90.50 19 27.32 Changed PRD domain
Prd1-P2 PF09214 Domain 1 1 555.00 100 93.91 Changed Bacteriophage Prd1, adsorption protein P2
PRD1_DD PF11087 Family 2 2 54.00 54 88.52 Changed PRD1 phage membrane DNA delivery
PRD_Mga PF08270 Family 6 27 204.10 15 42.77 Changed M protein trans-acting positive regulator (MGA) PRD domain
Pre-SET PF05033 Family 385 1332 110.00 28 14.64 Changed Pre-SET motif
Prefoldin PF02996 Family 35 1412 117.00 20 50.25 Changed Prefoldin subunit
Prefoldin_2 PF01920 Family 54 1806 103.40 19 74.71 Changed Prefoldin subunit
Prefoldin_3 PF13758 Domain 21 103 96.80 41 15.73 Changed Prefoldin subunit
PRELI PF04707 Family 15 1147 145.10 28 49.77 Changed PRELI-like family
Prenylcys_lyase PF07156 Family 38 413 329.20 28 69.64 Changed Prenylcysteine lyase
Prenyltrans PF00432 Repeat 63 6457 42.30 22 40.30 Changed Prenyltransferase and squalene oxidase repeat
Prenyltransf PF01255 Family 1408 2845 211.70 36 81.29 Changed Putative undecaprenyl diphosphate synthase
PRESAN PF09687 Domain 153 284 121.50 17 30.38 Changed Plasmodium RESA N-terminal
Presenilin PF01080 Family 66 519 267.70 35 82.30 Changed Presenilin
Preseq_ALAS PF09029 Domain 13 159 105.70 33 17.78 Changed 5-aminolevulinate synthase presequence
PRE_C2HC PF07530 Domain 10 204 64.00 31 12.10 Changed Associated with zinc fingers
PRF PF06875 Family 2 84 176.30 45 80.22 Changed Plethodontid receptivity factor PRF
PrgH PF09480 Family 13 20 354.70 24 93.91 Changed Type III secretion system protein PrgH-EprH (PrgH)
PrgI PF12666 Family 106 191 91.40 24 54.32 Changed PrgI family protein
PrgU PF09627 Domain 1 2 106.00 100 90.21 Changed PrgU-like protein
PRiA4_ORF3 PF07929 Family 120 463 157.90 20 54.90 Changed Plasmid pRiA4b ORF-3-like protein
Pribosyltran PF00156 Domain 33 11662 142.40 16 54.75 Changed Phosphoribosyl transferase domain
Pribosyltran_N PF13793 Domain 345 3496 117.50 41 33.76 Changed N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth PF14572 Domain 9 2952 130.60 38 37.59 Changed Phosphoribosyl synthetase-associated domain
PriC PF07445 Family 50 88 170.60 28 92.78 Changed Primosomal replication protein priC
PriCT_1 PF08708 Domain 24 156 67.60 22 13.21 Changed Primase C terminal 1 (PriCT-1)
PriCT_2 PF08707 Domain 65 151 75.50 23 10.62 Changed Primase C terminal 2 (PriCT-2)
Prim-Pol PF09250 Domain 113 435 170.20 20 41.77 Changed Bifunctional DNA primase/polymerase, N-terminal
PRIMA1 PF16101 Family 8 65 101.40 56 65.82 Changed Proline-rich membrane anchor 1
Prim_Zn_Ribbon PF08273 Domain 13 113 38.20 47 7.01 Changed Zinc-binding domain of primase-helicase
Prion PF00377 Domain 15 92 115.00 41 51.48 Changed Prion/Doppel alpha-helical domain
Prion_bPrPp PF11587 Family 7 46 28.60 69 11.44 Changed Major prion protein bPrPp - N terminal
Prion_octapep PF03991 Repeat 5 12 7.80 78 13.66 Changed Copper binding octapeptide repeat
Prismane PF03063 Family 175 1046 470.70 31 93.34 Changed Prismane/CO dehydrogenase family
PRK PF00485 Domain 10 3329 179.80 25 51.63 Changed Phosphoribulokinase / Uridine kinase family
PrkA PF06798 Family 74 414 255.50 38 39.12 Changed PrkA serine protein kinase C-terminal domain
PRKCSH PF07915 Family 100 680 85.40 27 20.42 Changed Glucosidase II beta subunit-like protein
PRKCSH-like PF12999 Family 5 588 144.60 32 33.52 Changed Glucosidase II beta subunit-like
PRKCSH_1 PF13015 Family 5 514 146.90 27 28.06 Changed Glucosidase II beta subunit-like protein
PRKG1_interact PF15898 Family 46 306 93.70 53 12.34 Changed cGMP-dependent protein kinase interacting domain
PrlF_antitoxin PF15937 Family 9 106 81.40 33 82.85 Changed prlF antitoxin for toxin YhaV_toxin
PrmA PF06325 Family 30 2440 197.30 24 55.18 Changed Ribosomal protein L11 methyltransferase (PrmA)
PRMT5 PF05185 Family 30 874 358.30 26 63.95 Changed PRMT5 arginine-N-methyltransferase
pRN1_helical PF13010 Domain 2 3 131.70 44 18.21 Changed Primase helical domain
PRNT PF15174 Family 2 3 50.00 61 62.50 Changed Prion-related protein testis-specific
Pro-kuma_activ PF09286 Domain 88 1100 137.40 24 21.24 Changed Pro-kumamolisin, activation domain
Pro-MCH PF05824 Family 5 66 73.10 62 47.15 Changed Pro-melanin-concentrating hormone (Pro-MCH)
Pro-NT_NN PF07421 Family 11 54 154.50 66 97.91 Changed Neurotensin/neuromedin N precursor
Pro-rich PF15240 Family 15 220 104.30 43 89.81 Changed Proline-rich
Pro-rich_19 PF15455 Family 10 38 318.80 64 73.29 Changed Proline-rich 19
PRO8NT PF08082 Domain 48 463 145.10 72 6.75 Changed PRO8NT (NUC069), PrP8 N-terminal domain
PROCN PF08083 Domain 16 502 361.20 76 17.66 Changed PROCN (NUC071) domain
PROCT PF08084 Domain 103 437 118.90 51 5.40 Changed PROCT (NUC072) domain
Profilin PF00235 Domain 258 911 125.20 27 88.25 Changed Profilin
Prog_receptor PF02161 Family 9 63 396.70 60 58.21 Changed Progesterone receptor
Proho_convert PF12177 Domain 9 57 38.70 75 5.21 Changed Prohormone convertase enzyme
Prok-E2_A PF14457 Family 9 28 149.80 23 21.15 Changed Prokaryotic E2 family A
Prok-E2_B PF14461 Family 9 39 123.20 17 22.16 Changed Prokaryotic E2 family B
Prok-E2_C PF14459 Family 2 3 131.00 67 25.32 Changed Prokaryotic E2 family C
Prok-E2_D PF14460 Family 21 67 171.80 23 71.37 Changed Prokaryotic E2 family D
Prok-E2_E PF14462 Family 14 21 123.10 34 54.24 Changed Prokaryotic E2 family E
Prok-JAB PF14464 Family 72 680 119.10 20 57.98 Changed Prokaryotic homologs of the JAB domain
Prok-RING_1 PF14446 Family 28 45 51.60 39 14.24 Changed Prokaryotic RING finger family 1
Prok-RING_2 PF14445 Family 3 5 50.60 38 28.75 Changed Prokaryotic RING finger family 2
Prok-RING_4 PF14447 Family 14 340 49.00 55 7.21 Changed Prokaryotic RING finger family 4
Prok-TraM PF09228 Domain 14 25 99.60 40 23.99 Changed Prokaryotic Transcriptional repressor TraM
Prokineticin PF06607 Family 7 167 94.10 40 65.70 Changed Prokineticin
Prok_Ub PF14454 Family 29 43 65.60 39 78.90 Changed Prokaryotic Ubiquitin
PROL5-SMR PF15621 Family 10 49 96.20 49 64.44 Changed Proline-rich submaxillary gland androgen-regulated family
Prolactin_RP PF15172 Family 8 46 44.70 58 41.50 Changed Prolactin-releasing peptide
Prolamin_like PF05617 Domain 94 549 68.80 23 50.68 Changed Prolamin-like
Promethin PF16015 Family 78 206 105.20 23 50.88 Changed Promethin
Prominin PF05478 Family 32 507 504.60 19 84.38 Changed Prominin
PRONE PF03759 Family 61 498 307.60 51 67.85 Changed PRONE (Plant-specific Rop nucleotide exchanger)
Propeptide_C1 PF08127 Motif 84 290 40.50 37 12.36 Changed Peptidase family C1 propeptide
Propeptide_C25 PF08126 Family 4 39 187.10 16 14.40 Changed Propeptide_C25
Propep_M14 PF02244 Domain 400 1012 72.10 22 16.51 Changed Carboxypeptidase activation peptide
Prophage_tail PF06605 Family 25 163 334.10 16 48.55 Changed Prophage endopeptidase tail
ProQ PF04352 Domain 67 217 108.50 34 53.89 Changed ProQ/FINO family
PRORP PF16953 Domain 18 303 202.10 28 39.28 Changed Protein-only RNase P
ProRS-C_1 PF09180 Domain 474 1180 75.10 33 12.07 Changed Prolyl-tRNA synthetase, C-terminal
ProRS-C_2 PF09181 Domain 4 6 63.30 54 13.76 Changed Prolyl-tRNA synthetase, C-terminal
ProSAAS PF07259 Family 3 30 159.60 79 69.65 Changed ProSAAS precursor
Prosystemin PF07376 Family 2 7 135.70 74 102.37 Changed Prosystemin
Protamine_3 PF08188 Family 2 0 0.00 0 0.00 Changed Spermatozal protamine family
Protamine_P1 PF00260 Family 7 22 46.30 73 96.40 Changed Protamine P1
Protamine_P2 PF00841 Family 7 26 90.30 63 75.72 Changed Sperm histone P2
Proteasome PF00227 Domain 157 9034 172.90 21 73.42 Changed Proteasome subunit
Proteasome_A_N PF10584 Domain 120 3162 22.90 63 8.88 Changed Proteasome subunit A N-terminal signature
Proteasom_PSMB PF10508 Family 7 239 391.90 23 89.55 Changed Proteasome non-ATPase 26S subunit
Proteasom_Rpn13 PF04683 Family 152 447 85.40 41 25.54 Changed Proteasome complex subunit Rpn13 ubiquitin receptor
Protein_K PF12283 Family 1 1 56.00 100 100.00 Changed Bacteriophage protein K
Prothymosin PF03247 Family 22 184 90.20 54 61.18 Changed Prothymosin/parathymosin family
Protocadherin PF08374 Family 17 307 211.10 47 20.40 Changed Protocadherin
Protoglobin PF11563 Domain 83 555 161.00 19 41.89 Changed Protoglobin
Proton_antipo_C PF01010 Family 77 205 158.60 26 25.97 Changed NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
Proton_antipo_M PF00361 Family 14 6937 278.00 25 51.91 Changed Proton-conducting membrane transporter
Proton_antipo_N PF00662 Family 481 2202 57.50 28 8.52 Changed NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Prot_ATP_ID_OB PF16450 Domain 78 182 130.50 45 23.15 Changed Proteasomal ATPase OB/ID domain
Prot_inhib_II PF02428 Domain 26 120 50.00 42 57.63 Changed Potato type II proteinase inhibitor family
Pro_3_hydrox_C PF05373 Domain 4 8 98.10 24 33.81 Changed L-proline 3-hydroxylase, C-terminal
Pro_Al_protease PF02983 Domain 100 237 58.50 29 14.88 Changed Alpha-lytic protease prodomain
Pro_CA PF00484 Domain 291 2552 148.00 26 60.20 Changed Carbonic anhydrase
Pro_dh PF01619 Family 242 1577 301.80 24 46.14 Changed Proline dehydrogenase
Pro_dh-DNA_bdg PF14850 Domain 112 346 112.40 53 9.68 Changed DNA-binding domain of Proline dehydrogenase
Pro_isomerase PF00160 Domain 75 9616 155.80 34 50.18 Changed Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Pro_racemase PF05544 Family 14 597 309.40 34 94.33 Changed Proline racemase
Prp18 PF02840 Family 101 472 135.90 46 39.24 Changed Prp18 domain
Prp19 PF08606 Domain 89 449 66.60 58 13.57 Changed Prp19/Pso4-like
PRP1_N PF06424 Domain 127 429 142.10 47 16.30 Changed PRP1 splicing factor, N-terminal
PRP21_like_P PF12230 Family 13 469 214.00 28 36.56 Changed Pre-mRNA splicing factor PRP21 like protein
PRP3 PF08572 Domain 134 452 214.50 39 37.56 Changed pre-mRNA processing factor 3 (PRP3)
Prp31_C PF09785 Family 104 431 128.60 43 25.22 Changed Prp31 C terminal domain
PRP38 PF03371 Family 164 697 163.50 34 49.77 Changed PRP38 family
PRP38_assoc PF12871 Domain 37 174 93.50 31 26.27 Changed Pre-mRNA-splicing factor 38-associated hydrophilic C-term
PRP4 PF08799 Domain 185 753 28.80 52 6.50 Changed pre-mRNA processing factor 4 (PRP4) like
PRP8_domainIV PF12134 Domain 18 459 219.60 79 10.14 Changed PRP8 domain IV core
PRP9_N PF16958 Domain 17 41 136.50 30 28.52 Changed Pre-mRNA-splicing factor PRP9 N-terminus
PrpF PF04303 Family 6 559 328.20 36 90.56 Changed PrpF protein
PrpR_N PF06506 Domain 97 223 164.50 23 27.68 Changed Propionate catabolism activator
PRR18 PF15671 Family 4 39 147.10 36 81.37 Changed Proline-rich protein family 18
PRR20 PF15708 Family 5 29 189.60 55 98.09 Changed Proline-rich protein family 20
PRR22 PF15776 Family 10 30 296.20 61 81.34 Changed Proline-rich protein family 22
PRRSV_2b PF07069 Family 2 0 0.00 0 0.00 Changed Porcine reproductive and respiratory syndrome virus 2b
PRRSV_Env PF02340 Family 4 0 0.00 0 0.00 Changed PRRSV putative envelope protein
PrsW-protease PF13367 Family 77 528 194.70 20 55.38 Changed Protease prsW family
PRTase_1 PF11202 Family 66 130 246.00 50 49.99 Changed Phosphoribosyl transferase (PRTase)
PRTase_2 PF15609 Family 69 127 197.50 40 37.65 Changed Phosphoribosyl transferase
PRTase_3 PF15610 Family 12 21 239.90 29 73.48 Changed PRTase ComF-like
PRTP PF01366 Family 12 16 636.90 30 83.97 Changed Herpesvirus processing and transport protein
PRT_C PF08372 Family 25 688 140.80 39 17.61 Changed Plant phosphoribosyltransferase C-terminal
PRY PF13765 Family 148 4621 48.80 38 9.20 Changed SPRY-associated domain
Pr_beta_C PF12465 Family 109 378 35.60 39 13.06 Changed Proteasome beta subunits C terminal
PS-DH PF14765 Domain 79 3747 279.20 17 11.77 Changed Polyketide synthase dehydratase
PsaA_PsaB PF00223 Family 18 435 412.30 45 89.95 Changed Photosystem I psaA/psaB protein
PsaD PF02531 Family 29 119 131.50 67 76.05 Changed PsaD
PsaL PF02605 Family 55 138 146.30 50 70.00 Changed Photosystem I reaction centre subunit XI
PsaM PF07465 Family 23 63 28.60 60 87.13 Changed Photosystem I protein M (PsaM)
PsaN PF05479 Family 8 88 112.30 37 70.52 Changed Photosystem I reaction centre subunit N (PSAN or PSI-N)
PsaX PF08078 Family 10 24 35.00 59 79.98 Changed PsaX family
Psb28 PF03912 Family 75 152 103.90 49 70.27 Changed Psb28 protein
PsbH PF00737 Family 13 112 51.30 71 72.43 Changed Photosystem II 10 kDa phosphoprotein
PsbI PF02532 Family 18 88 36.00 71 91.13 Changed Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
PsbJ PF01788 Family 28 109 39.10 62 73.98 Changed PsbJ
PsbK PF02533 Family 18 113 40.50 72 71.61 Changed Photosystem II 4 kDa reaction centre component
PsbL PF02419 Family 7 82 36.90 77 85.93 Changed PsbL protein
PsbM PF05151 Family 15 93 30.70 61 62.66 Changed Photosystem II reaction centre M protein (PsbM)
PsbN PF02468 Family 44 94 42.80 55 95.63 Changed Photosystem II reaction centre N protein (psbN)
PsbP PF01789 Family 85 701 166.50 21 65.90 Changed PsbP
PsbQ PF05757 Family 20 216 154.40 27 80.68 Changed Oxygen evolving enhancer protein 3 (PsbQ)
PsbR PF04725 Family 7 90 88.50 63 70.30 Changed Photosystem II 10 kDa polypeptide PsbR
PsbT PF01405 Family 15 83 28.80 60 86.30 Changed Photosystem II reaction centre T protein
PsbU PF06514 Family 11 67 91.40 48 62.33 Changed Photosystem II 12 kDa extrinsic protein (PsbU)
PsbW PF07123 Family 17 76 114.80 52 86.84 Changed Photosystem II reaction centre W protein (PsbW)
PsbX PF06596 Family 39 126 38.20 52 39.94 Changed Photosystem II reaction centre X protein (PsbX)
PsbY PF06298 Family 49 175 33.70 48 42.84 Changed Photosystem II protein Y (PsbY)
PSCyt1 PF07635 Family 64 416 58.50 31 7.36 Changed Planctomycete cytochrome C
PSCyt2 PF07583 Family 234 331 202.40 36 22.22 Changed Protein of unknown function (DUF1549)
PSCyt3 PF07627 Family 115 131 99.40 37 12.25 Changed Protein of unknown function (DUF1588)
PSD1 PF07587 Family 204 333 246.20 32 27.25 Changed Protein of unknown function (DUF1553)
PSD2 PF07624 Family 86 116 73.20 24 9.53 Changed Protein of unknown function (DUF1585)
PSD3 PF07626 Family 77 104 65.00 32 7.88 Changed Protein of unknown function (DUF1587)
PSD4 PF07631 Family 113 127 127.90 33 15.81 Changed Protein of unknown function (DUF1592)
PSD5 PF07637 Family 97 118 61.30 32 7.62 Changed Protein of unknown function (DUF1595)
PSDC PF12588 Family 98 197 132.00 36 30.52 Changed Phophatidylserine decarboxylase
PseudoU_synth_1 PF01416 Domain 325 4686 106.20 21 46.96 Changed tRNA pseudouridine synthase
PseudoU_synth_2 PF00849 Family 54 9231 150.40 23 46.94 Changed RNA pseudouridylate synthase
PSGP PF07276 Repeat 3 0 0.00 0 0.00 Changed Apopolysialoglycoprotein (PSGP)
PSI PF01437 Family 95 2669 54.40 25 5.70 Changed Plexin repeat
PsiA PF06952 Family 5 8 221.80 43 91.21 Changed PsiA protein
PsiB PF06290 Family 4 6 138.30 41 76.01 Changed Plasmid SOS inhibition protein (PsiB)
PsiE PF06146 Family 272 559 68.10 23 44.50 Changed Phosphate-starvation-inducible E
PsiF_repeat PF07769 Repeat 72 198 32.70 54 56.08 Changed psiF repeat
PSII PF00421 Family 17 543 282.30 33 90.50 Changed Photosystem II protein
PSII_BNR PF14870 Domain 17 505 160.30 22 56.65 Changed Photosynthesis system II assembly factor YCF48
PSII_Pbs27 PF13326 Family 21 166 136.00 27 82.39 Changed Photosystem II Pbs27
PSII_Ycf12 PF05969 Family 11 57 32.50 51 80.57 Changed Photosystem II complex subunit Ycf12
PSI_8 PF00796 Family 26 81 25.00 59 61.97 Changed Photosystem I reaction centre subunit VIII
PSI_PsaE PF02427 Domain 28 137 60.50 63 56.94 Changed Photosystem I reaction centre subunit IV / PsaE
PSI_PsaF PF02507 Family 11 130 138.80 50 76.04 Changed Photosystem I reaction centre subunit III
PSI_PsaH PF03244 Family 8 67 130.90 63 92.24 Changed Photosystem I reaction centre subunit VI
PSI_PsaJ PF01701 Family 34 101 36.40 53 80.68 Changed Photosystem I reaction centre subunit IX / PsaJ
PSI_PSAK PF01241 Family 28 185 76.10 36 68.51 Changed Photosystem I psaG / psaK
PSK PF06404 Family 40 191 74.10 32 82.15 Changed Phytosulfokine precursor protein (PSK)
PSK_trans_fac PF07704 Domain 63 98 81.10 26 91.37 Changed Rv0623-like transcription factor
Psm4 PF17063 Family 1 1 20.00 100 100.00 Changed Phenol-soluble modulin alpha 4 peptide
PSP PF04046 Family 107 647 47.80 52 8.11 Changed PSP
PSP1 PF04468 Family 514 1077 87.20 40 20.03 Changed PSP1 C-terminal conserved region
PSP94 PF05825 Domain 4 129 86.10 32 61.19 Changed Beta-microseminoprotein (PSP-94)
PspA_IM30 PF04012 Family 11 955 219.60 24 89.34 Changed PspA/IM30 family
PspB PF06667 Family 50 114 72.10 40 91.00 Changed Phage shock protein B
PspC PF04024 Domain 739 1178 58.40 33 27.22 Changed PspC domain
PSRP-3_Ycf65 PF04839 Family 17 119 47.60 67 33.59 Changed Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
PSRT PF07636 Motif 4 7 30.60 59 19.12 Changed PSRT
PSS PF03034 Family 79 430 240.80 41 61.10 Changed Phosphatidyl serine synthase
Psu PF07455 Family 3 8 151.20 39 94.38 Changed Phage polarity suppression protein (Psu)
PSY3 PF16836 Domain 14 33 203.90 29 90.20 Changed Shu complex component Psy3, DNA-binding description
PS_Dcarbxylase PF02666 Family 108 2185 208.80 26 52.92 Changed Phosphatidylserine decarboxylase
PS_pyruv_trans PF04230 Family 156 1244 269.60 13 67.02 Changed Polysaccharide pyruvyl transferase
PT PF04886 Repeat 14 183 38.00 42 7.63 Changed PT repeat
PT-HINT PF07591 Family 3 238 126.70 31 9.70 Changed Pretoxin HINT domain
PT-TG PF14449 Family 37 53 76.20 22 13.25 Changed Pre-toxin TG
PT-VENN PF04829 Family 38 115 50.50 39 3.23 Changed Pre-toxin domain with VENN motif
PTAC PF06130 Domain 373 604 74.00 35 66.67 Changed Phosphate propanoyltransferase
ptaRNA1_toxin PF12703 Family 4 8 72.80 51 69.04 Changed Toxin of toxin-antitoxin type 1 system
PTase_Orf2 PF11468 Family 5 13 273.10 31 88.29 Changed Aromatic prenyltransferase Orf2
PTA_PTB PF01515 Family 19 2254 279.80 29 57.76 Changed Phosphate acetyl/butaryl transferase
PTB PF08416 Family 14 727 126.80 29 13.73 Changed Phosphotyrosine-binding domain
PTCB-BRCT PF12738 Family 42 1969 63.30 24 10.55 Changed twin BRCT domain
PTCRA PF15028 Domain 7 33 125.00 73 51.95 Changed Pre-T-cell antigen receptor
PTE PF02126 Domain 3 349 305.80 28 92.76 Changed Phosphotriesterase family
PTEN_C2 PF10409 Family 50 1030 136.90 26 14.26 Changed C2 domain of PTEN tumour-suppressor protein
Pterin_4a PF01329 Domain 579 1296 91.00 31 67.27 Changed Pterin 4 alpha carbinolamine dehydratase
Pterin_bind PF00809 Domain 30 3328 233.50 28 39.10 Changed Pterin binding enzyme
PTH2 PF01981 Family 324 1001 110.20 34 61.88 Changed Peptidyl-tRNA hydrolase PTH2
PTN13_u3 PF16599 Family 19 72 181.10 49 8.38 Changed Unstructured linker region on PTN13 protein between PDZ
PTN_MK_C PF01091 Domain 23 215 60.00 43 40.05 Changed PTN/MK heparin-binding protein family, C-terminal domain
PTN_MK_N PF05196 Domain 17 127 59.60 62 37.32 Changed PTN/MK heparin-binding protein family, N-terminal domain
PTP2 PF17022 Family 11 12 194.20 22 71.89 Changed Polar tube protein 2 from Microsporidia
PTPA PF03095 Family 281 732 271.40 38 75.87 Changed Phosphotyrosyl phosphate activator (PTPA) protein
PTPLA PF04387 Family 244 879 149.40 32 59.95 Changed Protein tyrosine phosphatase-like protein, PTPLA
PTPlike_phytase PF14566 Domain 49 516 151.20 28 34.70 Changed Inositol hexakisphosphate
PTPRCAP PF15713 Family 17 37 146.40 57 68.48 Changed Protein tyrosine phosphatase receptor type C-associated
PTPS PF01242 Domain 103 1670 128.40 26 88.34 Changed 6-pyruvoyl tetrahydropterin synthase
PTPS_related PF10131 Family 9 55 436.80 14 62.76 Changed 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
PTP_N PF12453 Family 5 36 25.40 78 2.93 Changed Protein tyrosine phosphatase N terminal
PTR PF12789 Repeat 16 1780 47.20 42 24.71 Changed Phage tail repeat like
PTR2 PF00854 Family 21 5881 314.10 20 70.53 Changed POT family
PTRF_SDPR PF15237 Family 33 277 199.80 39 66.34 Changed PTRF/SDPR family
PTS-HPr PF00381 Domain 1126 2224 80.30 29 47.63 Changed PTS HPr component phosphorylation site
PTSIIA_gutA PF03829 Family 101 168 113.40 31 89.77 Changed PTS system glucitol/sorbitol-specific IIA component
PTSIIB_sorb PF03830 Family 382 770 146.90 32 73.04 Changed PTS system sorbose subfamily IIB component
PTS_2-RNA PF01885 Family 254 711 174.30 33 66.47 Changed RNA 2'-phosphotransferase, Tpt1 / KptA family
PTS_EIIA_1 PF00358 Domain 815 1449 126.00 40 26.50 Changed phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PTS_EIIA_2 PF00359 Family 104 2958 141.80 21 35.27 Changed Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PTS_EIIB PF00367 Domain 986 2137 33.70 42 6.48 Changed phosphotransferase system, EIIB
PTS_EIIC PF02378 Family 49 3781 300.30 17 56.47 Changed Phosphotransferase system, EIIC
PTS_EIIC_2 PF13303 Family 45 352 321.10 32 93.00 Changed Phosphotransferase system, EIIC
PTS_IIA PF02255 Domain 290 526 93.70 36 86.81 Changed PTS system, Lactose/Cellobiose specific IIA subunit
PTS_IIB PF02302 Domain 229 2537 89.40 20 27.16 Changed PTS system, Lactose/Cellobiose specific IIB subunit
PUA PF01472 Family 93 2659 75.10 26 20.13 Changed PUA domain
PUA_2 PF14306 Domain 65 917 157.40 34 30.93 Changed PUA-like domain
PUB PF09409 Domain 100 817 81.20 22 15.13 Changed PUB domain
PUCC PF03209 Family 9 167 363.40 28 78.12 Changed PUCC protein
PucR PF07905 Family 209 700 119.20 25 24.22 Changed Purine catabolism regulatory protein-like family
PUD PF03714 Domain 147 297 98.90 24 12.32 Changed Bacterial pullanase-associated domain
PUF PF00806 Repeat 50 9108 33.60 25 20.45 Changed Pumilio-family RNA binding repeat
PUFD PF16553 Domain 16 145 113.40 61 7.80 Changed BCORL-PCGF1-binding domain
PufQ PF05398 Family 6 8 72.20 38 90.60 Changed PufQ cytochrome subunit
PUL PF08324 Domain 192 573 254.80 19 36.44 Changed PUL domain
PulG PF11773 Family 11 16 80.20 38 86.76 Changed Type II secretory pathway pseudopilin
PUMA PF15826 Family 4 25 153.00 69 90.34 Changed Bcl-2-binding component 3, p53 upregulated modulator of apoptosis
PUNUT PF16913 Family 16 591 263.70 32 81.23 Changed Purine nucleobase transmembrane transport
Pup PF05639 Family 24 171 64.90 45 94.39 Changed Pup-like protein
Pup_ligase PF03136 Family 131 351 442.10 47 90.69 Changed Pup-ligase protein
PurA PF04845 Family 5 363 173.80 39 73.97 Changed PurA ssDNA and RNA-binding protein
PurL_C PF16904 Domain 3 3 89.30 42 14.96 Changed Phosphoribosylformylglycinamidine synthase II C-terminus
PurS PF02700 Family 352 701 75.80 38 63.99 Changed Phosphoribosylformylglycinamidine (FGAM) synthase
Pur_ac_phosph_N PF16656 Domain 264 1542 98.20 24 17.94 Changed Purple acid Phosphatase, N-terminal domain
Pur_DNA_glyco PF02245 Domain 399 719 181.10 36 83.25 Changed Methylpurine-DNA glycosylase (MPG)
PuR_N PF09182 Domain 91 212 69.60 50 25.23 Changed Bacterial purine repressor, N-terminal
putAbiC PF16872 Family 24 27 80.70 25 25.24 Changed Putative phage abortive infection protein
Put_DNA-bind_N PF06971 Family 238 698 48.70 41 22.03 Changed Putative DNA-binding protein N-terminus
Put_Phosphatase PF06888 Family 9 435 208.40 33 81.36 Changed Putative Phosphatase
PV-1 PF06637 Family 10 82 313.50 40 79.15 Changed PV-1 protein (PLVAP)
PvlArgDC PF01862 Family 101 188 159.70 32 92.87 Changed Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
PVL_ORF50 PF07768 Family 3 3 119.70 45 95.73 Changed PVL ORF-50-like family
PV_NSP1 PF12433 Family 2 3 81.00 54 12.25 Changed Parvovirus non-structural protein 1
PWI PF01480 Family 124 1284 70.00 27 10.43 Changed PWI domain
PWWP PF00855 Domain 233 3057 95.70 22 11.86 Changed PWWP domain
PX PF00787 Domain 67 8079 115.70 19 18.23 Changed PX domain
PXA PF02194 Family 319 1052 172.60 22 19.01 Changed PXA domain
PXB PF12828 Domain 86 276 135.10 37 14.50 Changed PX-associated
PXPV PF12778 Repeat 11 45 21.70 61 26.12 Changed PXPV repeat (3 copies)
PXT1 PF15214 Family 7 21 49.70 71 41.64 Changed Peroxisomal testis-specific protein 1
PYC_OADA PF02436 Domain 447 1487 191.80 32 22.66 Changed Conserved carboxylase domain
PYNP_C PF07831 Domain 46 942 73.10 30 16.47 Changed Pyrimidine nucleoside phosphorylase C-terminal domain
PyocinActivator PF11112 Family 21 38 74.00 33 77.89 Changed Pyocin activator protein PrtN
Pyocin_S PF06958 Family 38 40 137.30 25 23.93 Changed S-type Pyocin
PyrBI_leader PF08052 Family 2 5 39.60 85 97.54 Changed PyrBI operon leader peptide
PyrI PF01948 Domain 239 468 91.80 40 55.72 Changed Aspartate carbamoyltransferase regulatory chain, allosteric domain
Pyridoxal_deC PF00282 Family 9 4321 305.30 21 63.00 Changed Pyridoxal-dependent decarboxylase conserved domain
Pyridox_oxase_2 PF12766 Family 50 328 104.60 30 40.37 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_oxidase PF01243 Domain 124 4261 89.60 18 44.35 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_ox_2 PF12900 Family 99 1127 140.20 21 74.88 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_oxidase_2 PF13883 Domain 32 622 160.30 24 59.60 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_ox_like PF16242 Domain 23 442 145.00 23 79.29 Changed Pyridoxamine 5'-phosphate oxidase like
PYRIN PF02758 Domain 246 848 75.10 27 10.67 Changed PAAD/DAPIN/Pyrin domain
PyrI_C PF02748 Domain 157 503 47.50 36 26.69 Changed Aspartate carbamoyltransferase regulatory chain, metal binding domain
Pyrophosphatase PF00719 Domain 630 2139 158.60 36 69.65 Changed Inorganic pyrophosphatase
Pyr_excise PF03013 Domain 26 75 113.60 34 86.31 Changed Pyrimidine dimer DNA glycosylase
Pyr_redox PF00070 Domain 95 373 79.20 24 16.22 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 Domain 65 25571 287.50 18 57.53 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 Family 61 2237 230.40 19 49.01 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 Domain 85 6751 109.70 27 22.38 Changed Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PYST-C1 PF09690 Domain 16 26 58.40 39 45.99 Changed Plasmodium yoelii subtelomeric region (PYST-C1)
PY_rept_46 PF09689 Domain 8 38 44.00 58 72.87 Changed Plasmodium yoelii repeat (PY_rept_46)
P_C PF06640 Family 4 36 144.00 36 67.73 Changed P protein C-terminus
P_gingi_FimA PF06321 Family 32 117 298.30 11 56.30 Changed Major fimbrial subunit protein (FimA)
P_proprotein PF01483 Family 45 1301 87.50 34 10.29 Changed Proprotein convertase P-domain
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