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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
P-II PF00543 Domain 77 16759 101.50 62 83.52 Changed Nitrogen regulatory protein P-II
P-mevalo_kinase PF04275 Family 52 342 111.10 31 28.42 Changed Phosphomevalonate kinase
P12 PF12669 Family 132 5374 47.30 66 83.99 Changed Virus attachment protein p12 family
P120R PF08062 Repeat 6 61 21.90 50 5.61 Changed P120R (NUC006) repeat
p12I PF12233 Family 1 52 97.90 96 100.00 Changed Human adult T cell leukemia/lymphoma virus protein
P16-Arc PF04699 Domain 134 696 143.30 36 90.22 Changed ARP2/3 complex 16 kDa subunit (p16-Arc)
P19Arf_N PF07392 Family 8 45 48.90 73 45.71 Changed Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus
P2 PF07194 Family 228 1725 80.90 26 11.80 Changed P2 response regulator binding domain
P21-Arc PF04062 Family 102 634 171.00 49 91.18 Changed ARP2/3 complex ARPC3 (21 kDa) subunit
P22_AR_C PF10548 Domain 9 2193 70.60 46 29.64 Changed P22AR C-terminal domain
P22_AR_N PF10547 Domain 27 1814 107.40 57 45.66 Changed P22_AR N-terminal domain
P22_CoatProtein PF11651 Family 12 1171 356.30 24 95.18 Changed P22 coat protein - gene protein 5
P22_Cro PF14549 Domain 10 3294 58.30 40 81.92 Changed DNA-binding transcriptional regulator Cro
P22_portal PF16510 Domain 3 743 606.90 43 88.76 New Phage P22-like portal protein
P22_Tail-4 PF11650 Family 4 597 156.20 53 95.84 Changed P22 tail accessory factor
p25-alpha PF05517 Family 78 568 142.00 33 62.16 Changed p25-alpha
P2X_receptor PF00864 Family 72 936 266.60 37 81.71 Changed ATP P2X receptor
P2_Phage_GpR PF06891 Family 55 3323 128.40 42 85.29 Changed P2 phage tail completion protein R (GpR)
P30 PF07390 Family 1 18 174.90 46 96.04 Changed Mycoplasma P30 protein
p31comet PF06581 Family 5 110 226.20 39 82.13 Changed Mad1 and Cdc20-bound-Mad2 binding
P33MONOX PF15302 Family 21 120 241.50 59 95.44 Changed P33 mono-oxygenase
P34-Arc PF04045 Family 97 828 217.60 40 68.96 Changed Arp2/3 complex, 34 kD subunit p34-Arc
P35 PF02331 Domain 1 38 286.40 54 90.78 Changed Apoptosis preventing protein
P3A PF08727 Domain 21 1828 57.40 57 2.72 Changed Poliovirus 3A protein like
p450 PF00067 Domain 50 114258 306.70 18 74.42 Changed Cytochrome P450
p47_phox_C PF08944 Domain 16 119 57.00 37 13.79 Changed NADPH oxidase subunit p47Phox, C terminal domain
P4Ha_N PF08336 Family 205 910 124.70 30 26.10 Changed Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
P5-ATPase PF12409 Family 158 864 122.60 23 10.42 Changed P5-type ATPase cation transporter
P53 PF00870 Domain 5 777 150.40 49 42.68 Changed P53 DNA-binding domain
p53-inducible11 PF14936 Family 9 142 149.70 58 80.80 Changed Tumour protein p53-inducible protein 11
P53_C PF11619 Family 4 16 66.60 68 15.71 Changed Transcription factor P53 - C terminal domain
P53_TAD PF08563 Motif 7 165 23.80 63 6.23 Changed P53 transactivation motif
P53_tetramer PF07710 Motif 22 408 40.70 48 8.68 Changed P53 tetramerisation motif
P5CR_dimer PF14748 Domain 1100 22020 105.70 37 39.03 Changed Pyrroline-5-carboxylate reductase dimerisation
P63C PF10546 Domain 12 539 89.50 37 30.89 Changed P63C domain
P66_CC PF16563 Coiled-coil 17 246 44.10 61 6.97 New Coiled-coil and interaction region of P66A and P66B with MBD2
P68HR PF08061 Repeat 5 157 33.60 58 11.52 Changed P68HR (NUC004) repeat
PA PF02225 Family 424 12899 97.60 21 13.28 Changed PA domain
PA-IIL PF07472 Family 10 325 107.90 63 68.86 Changed Fucose-binding lectin II (PA-IIL)
PA-IL PF07828 Family 2 228 118.90 79 96.19 Changed PA-IL-like protein
PA14 PF07691 Domain 23 4173 134.60 15 14.14 Changed PA14 domain
PA14_2 PF10528 Domain 6 337 113.30 24 16.09 Changed GLEYA domain
PA26 PF04636 Family 33 511 365.30 42 81.73 Changed PA26 p53-induced protein (sestrin)
PA28_alpha PF02251 Family 50 443 57.70 39 21.72 Changed Proteasome activator pa28 alpha subunit
PA28_beta PF02252 Family 80 655 130.00 40 51.89 Changed Proteasome activator pa28 beta subunit
PaaA_PaaC PF05138 Domain 71 5612 269.00 38 94.74 Changed Phenylacetic acid catabolic protein
PaaB PF06243 Family 48 2795 88.40 65 90.57 Changed Phenylacetic acid degradation B
PAAR_motif PF05488 Motif 172 9648 84.00 30 20.09 Changed PAAR motif
PaaSYMP PF14738 Family 63 251 148.00 36 20.98 Changed Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
PaaX PF07848 Family 11 4454 66.80 48 23.94 Changed PaaX-like protein
PaaX_C PF08223 Family 29 5386 158.70 36 57.53 Changed PaaX-like protein C-terminal domain
Pab87_oct PF13969 Domain 10 30 93.00 31 22.01 Changed Pab87 octamerisation domain
PABP PF00658 Family 160 1517 67.00 48 8.67 Changed Poly-adenylate binding protein, unique domain
PAC1 PF16094 Family 15 169 228.90 31 83.59 New Proteasome assembly chaperone 4
PAC2 PF09754 Family 397 5698 215.10 38 72.83 Changed PAC2 family
PAC3 PF10178 Family 44 317 90.30 27 55.25 Changed Proteasome assembly chaperone 3
PAC4 PF16093 Family 122 392 78.10 27 51.71 New Proteasome assembly chaperone 4
Pacifastin_I PF05375 Family 36 437 38.40 36 26.50 Changed Pacifastin inhibitor (LCMII)
Packaging_FI PF14000 Family 3 2872 121.90 51 95.33 Changed DNA packaging protein FI
Pacs-1 PF10254 Family 34 422 327.40 43 47.19 Changed PACS-1 cytosolic sorting protein
PACT_coil_coil PF10495 Domain 101 393 80.10 36 3.93 Changed Pericentrin-AKAP-450 domain of centrosomal targeting protein
PAD PF03068 Family 62 531 324.50 40 60.41 Changed Protein-arginine deiminase (PAD)
PadR PF03551 Family 30 33404 72.70 31 49.37 Changed Transcriptional regulator PadR-like family
PADR1 PF08063 Domain 96 324 52.70 40 6.08 Changed PADR1 (NUC008) domain
PAD_M PF08527 Domain 76 298 151.40 44 24.64 Changed Protein-arginine deiminase (PAD) middle domain
PAD_N PF08526 Domain 55 259 105.00 36 17.01 Changed Protein-arginine deiminase (PAD) N-terminal domain
PAD_porph PF04371 Family 453 5073 327.70 34 93.17 Changed Porphyromonas-type peptidyl-arginine deiminase
PAE PF03283 Family 63 1430 246.90 27 65.01 Changed Pectinacetylesterase
PAF PF15715 Family 10 88 68.30 63 56.45 New PCNA-associated factor
PAF-AH_p_II PF03403 Domain 7 904 294.50 20 69.45 Changed Platelet-activating factor acetylhydrolase, isoform II
Paf1 PF03985 Family 42 650 372.80 23 80.80 Changed Paf1
Paf67 PF10255 Family 77 786 323.50 40 74.48 Changed RNA polymerase I-associated factor PAF67
PAG PF15347 Family 13 74 390.60 55 97.07 Changed Phosphoprotein associated with glycosphingolipid-enriched
PAGK PF15284 Family 3 281 66.20 76 93.74 Changed Phage-encoded virulence factor
PagL PF09411 Family 50 2237 140.70 29 68.35 Changed Lipid A 3-O-deacylase (PagL)
PagP PF07017 Family 35 3455 144.80 83 78.20 Changed Antimicrobial peptide resistance and lipid A acylation protein PagP
PAH PF02671 Repeat 421 2653 46.30 37 8.94 Changed Paired amphipathic helix repeat
Paired_CXXCH_1 PF09699 Domain 153 4303 43.80 50 21.55 Changed Doubled CXXCH motif (Paired_CXXCH_1)
Pal1 PF08316 Family 63 460 124.10 32 28.67 Changed Pal1 cell morphology protein
PALB2_WD40 PF16756 Domain 6 83 297.40 55 32.89 New Partner and localizer of BRCA2 WD40 domain
PalH PF08733 Family 81 284 349.00 32 53.26 Changed PalH/RIM21
Palm_thioest PF02089 Domain 1 962 232.70 31 81.01 Changed Palmitoyl protein thioesterase
PALP PF00291 Family 148 137827 295.10 22 79.52 Changed Pyridoxal-phosphate dependent enzyme
Pam16 PF03656 Family 3 673 119.70 36 77.18 Changed Pam16
Pam17 PF08566 Family 75 278 162.70 42 71.10 Changed Mitochondrial import protein Pam17
PAM2 PF07145 Motif 40 1335 17.40 49 3.61 Changed Ataxin-2 C-terminal region
Pannexin_like PF12534 Family 48 393 314.20 50 43.10 Changed Pannexin-like TM region of LRRC8
Pantoate_ligase PF02569 Family 809 16453 272.30 47 95.22 Changed Pantoate-beta-alanine ligase
Pantoate_transf PF02548 Family 778 16931 253.50 50 93.51 Changed Ketopantoate hydroxymethyltransferase
PAN_1 PF00024 Domain 88 3964 79.40 15 18.71 Changed PAN domain
PAN_2 PF08276 Domain 60 3708 66.80 33 10.17 Changed PAN-like domain
PAN_3 PF08277 Domain 40 401 68.60 21 23.25 Changed PAN-like domain
PAN_4 PF14295 Domain 36 2293 47.00 22 16.85 Changed PAN domain
Pan_kinase PF03309 Family 146 7737 196.30 31 74.46 Changed Type III pantothenate kinase
PaO PF08417 Family 91 534 93.20 26 20.26 Changed Pheophorbide a oxygenase
PAP1 PF08601 Family 12 483 175.80 18 48.96 Changed Transcription factor PAP1
PAP2 PF01569 Family 76 53241 125.50 21 50.02 Changed PAP2 superfamily
PAP2_3 PF14378 Family 12 3639 146.40 31 39.86 Changed PAP2 superfamily
PAP2_C PF14360 Domain 53 951 73.00 35 19.77 Changed PAP2 superfamily C-terminal
PAPA-1 PF04795 Family 89 527 83.10 32 20.60 Changed PAPA-1-like conserved region
PapA_C PF16911 Family 33 1864 110.30 78 26.40 New Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
PapB PF03333 Family 14 1511 87.10 48 82.50 Changed Adhesin biosynthesis transcription regulatory protein
PapC_C PF13953 Domain 179 37996 63.70 29 7.98 Changed PapC C-terminal domain
PapC_N PF13954 Domain 237 36504 143.00 30 17.75 Changed PapC N-terminal domain
PapD-like PF14874 Domain 5 354 95.60 20 5.34 Changed Flagellar-associated PapD-like
PapD_C PF02753 Domain 199 39930 59.80 27 25.71 Changed Pili assembly chaperone PapD, C-terminal domain
PapD_N PF00345 Domain 88 45753 120.80 34 51.76 Changed Pili and flagellar-assembly chaperone, PapD N-terminal domain
PapG_C PF03628 Domain 3 426 108.60 83 33.52 Changed PapG chaperone-binding domain
PapG_N PF03627 Domain 4 416 212.50 66 66.64 Changed PapG carbohydrate binding domain
Papilin_u7 PF16626 Disordered 16 43 86.10 61 7.88 New Linking region between Kunitz_BPTI and I-set on papilin
Papilloma_E5 PF03025 Family 13 176 70.50 53 93.10 Changed Papillomavirus E5
Papilloma_E5A PF05776 Family 5 138 47.10 93 99.91 Changed Papillomavirus E5A protein
PapJ PF14855 Domain 3 451 185.60 75 99.81 Changed Pilus-assembly fibrillin subunit, chaperone
Papo_T_antigen PF02380 Family 10 361 84.90 35 52.96 Changed T-antigen specific domain
PAPS_reduct PF01507 Family 27 29596 185.80 27 62.81 Changed Phosphoadenosine phosphosulfate reductase family
PAP_assoc PF03828 Family 82 2438 60.40 27 8.67 Changed Cid1 family poly A polymerase
PAP_central PF04928 Domain 120 1468 304.40 36 48.52 Changed Poly(A) polymerase central domain
Pap_E4 PF02711 Family 40 387 91.20 50 92.20 Changed E4 protein
PAP_fibrillin PF04755 Family 12 1174 167.70 22 63.81 Changed PAP_fibrillin
PAP_PilO PF06864 Family 11 1191 376.60 28 90.84 Changed Pilin accessory protein (PilO)
PAP_RNA-bind PF04926 Domain 113 1274 105.70 27 19.66 Changed Poly(A) polymerase predicted RNA binding domain
PAR1 PF06521 Family 16 139 144.10 49 83.65 Changed PAR1 protein
ParA PF10609 Family 165 19832 238.60 47 68.53 Changed NUBPL iron-transfer P-loop NTPase
Paralemmin PF03285 Family 33 334 263.70 34 64.79 Changed Paralemmin
Paramecium_SA PF01508 Domain 74 1815 63.50 27 47.12 Changed Paramecium surface antigen domain
Paramyxo_C PF01692 Family 1 108 187.20 59 96.71 Changed Paramyxovirus non-structural protein C
Paramyxo_ncap PF00973 Family 9 8676 178.50 70 97.12 Changed Paramyxovirus nucleocapsid protein
Paramyxo_NS_C PF02725 Family 1 137 163.40 69 89.86 Changed Non-structural protein C
Paramyxo_P PF01806 Domain 1 158 244.60 60 42.73 Changed Paramyxovirinae P phosphoprotein C-terminal region
Paramyxo_PCT PF14320 Domain 1 49 295.70 78 57.01 Changed Phosphoprotein P region PCT disordered
Paramyxo_PNT PF13825 Family 8 712 233.70 55 64.56 Changed Paramyxovirus structural protein V/P N-terminus
Paramyx_P_V_C PF03210 Family 4 1005 161.10 43 37.62 Changed Paramyxovirus P/V phosphoprotein C-terminal
Parathyroid PF01279 Family 17 194 88.40 40 60.59 Changed Parathyroid hormone family
ParB PF08775 Domain 16 1035 123.40 46 38.75 Changed ParB family
ParBc PF02195 Family 39 45928 90.50 29 29.68 Changed ParB-like nuclease domain
ParBc_2 PF08857 Domain 57 703 170.30 39 62.54 Changed Putative ParB-like nuclease
ParcG PF10274 Family 21 564 155.90 36 30.31 Changed Parkin co-regulated protein
ParD PF09386 Domain 1 87 75.90 57 86.28 Changed Antitoxin ParD
Pardaxin PF07425 Family 3 5 33.00 95 100.00 Changed Pardaxin
ParD_antitoxin PF03693 Domain 4 5379 78.00 40 91.53 Changed Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
ParD_like PF11903 Domain 20 2979 87.90 46 82.38 Changed ParD-like antitoxin of type II bacterial toxin-antitoxin system
ParE-like_toxin PF15781 Family 20 568 85.30 52 90.48 New ParE-like toxin of type II bacterial toxin-antitoxin system
Parecho_VpG PF06344 Domain 1 78 20.00 87 0.92 Changed Parechovirus Genome-linked protein
PaREP1 PF05942 Family 67 532 112.50 24 71.96 Changed Archaeal PaREP1/PaREP8 family
PaRep2a PF07903 Family 6 34 79.70 54 71.95 Changed PaRep2a protein
PaRep2b PF07775 Family 13 101 206.00 21 57.49 Changed PaRep2b protein
ParE_toxin PF05016 Family 158 23230 85.70 18 88.51 Changed ParE toxin of type II toxin-antitoxin system, parDE
ParG PF09274 Domain 3 243 66.50 33 82.96 Changed ParG
PARG_cat PF05028 Family 86 679 271.80 27 52.19 Changed Poly (ADP-ribose) glycohydrolase (PARG)
PARM PF17061 Family 16 61 239.90 58 92.35 New PARM
PARP PF00644 Family 28 3404 176.90 20 23.24 Changed Poly(ADP-ribose) polymerase catalytic domain
PARP_reg PF02877 Domain 237 1028 133.50 30 16.68 Changed Poly(ADP-ribose) polymerase, regulatory domain
PARP_regulatory PF01358 Domain 9 159 253.00 37 70.21 Changed Poly A polymerase regulatory subunit
partial_CstF PF15861 Domain 12 59 61.50 45 9.10 New Partial cleavage stimulation factor domain
Parvo_coat PF00740 Family 5 4913 295.40 25 76.15 Changed Parvovirus coat protein VP2
Parvo_coat_N PF08398 Family 4 1618 58.50 57 10.63 Changed Parvovirus coat protein VP1
Parvo_NS1 PF01057 Domain 24 1819 181.00 34 50.12 Changed Parvovirus non-structural protein NS1
PAS PF00989 Domain 49 54454 102.40 17 17.37 Changed PAS fold
PASTA PF03793 Domain 237 54923 62.00 25 21.53 Changed PASTA domain
PAS_10 PF13596 Domain 48 3844 107.80 26 18.73 Changed PAS domain
PAS_11 PF14598 Domain 22 2292 105.60 28 14.80 Changed PAS domain
PAS_12 PF16736 Domain 11 1394 116.30 28 20.69 New PAS domain of
PAS_2 PF08446 Domain 25 2498 107.40 31 12.69 Changed PAS fold
PAS_3 PF08447 Domain 122 47117 86.80 18 13.92 Changed PAS fold
PAS_4 PF08448 Domain 49 44229 109.90 16 17.68 Changed PAS fold
PAS_5 PF07310 Domain 10 758 136.20 33 68.15 Changed PAS domain
PAS_6 PF08348 Domain 219 7663 112.70 45 49.65 Changed YheO-like PAS domain
PAS_7 PF12860 Domain 95 7329 112.00 25 14.78 Changed PAS fold
PAS_8 PF13188 Domain 260 21816 67.60 16 10.95 Changed PAS domain
PAS_9 PF13426 Domain 240 51304 103.70 19 16.74 Changed PAS domain
Pas_Saposin PF09016 Domain 5 108 74.60 77 99.16 Changed Pas factor saposin fold
PAT1 PF09770 Family 39 536 487.50 23 75.72 Changed Topoisomerase II-associated protein PAT1
Patatin PF01734 Family 115 45619 180.50 23 37.58 Changed Patatin-like phospholipase
Patched PF02460 Family 9 5366 331.40 20 56.83 Changed Patched family
Pathogen_betaC1 PF09593 Domain 36 619 116.00 45 97.03 Changed Beta-satellite pathogenicity beta C1 protein
PAW PF04721 Domain 44 186 181.80 34 32.55 Changed PNGase C-terminal domain, mannose-binding module PAW
PAX PF00292 Domain 5 2076 115.10 65 31.80 Changed 'Paired box' domain
Pax2_C PF12403 Family 20 330 99.30 53 27.19 Changed Paired-box protein 2 C terminal
Pax7 PF12360 Family 12 228 42.40 69 9.56 Changed Paired box protein 7
Paxillin PF03535 Family 17 175 168.20 41 32.81 Changed Paxillin family
PAXIP1_C PF15364 Family 14 127 127.00 40 60.02 Changed PAXIP1-associated-protein-1 C term PTIP binding protein
PAXNEB PF05625 Domain 77 592 338.40 25 90.63 Changed PAXNEB protein
PAXX PF15384 Family 9 63 176.30 48 92.16 Changed PAXX, PAralog of XRCC4 and XLF, also called C9orf142
PAZ PF02170 Family 266 3403 129.10 21 13.31 Changed PAZ domain
PAZ_siRNAbind PF12212 Domain 11 72 45.30 52 37.17 Changed Piwi/Argonaute/Zwille siRNA-binding domain
PA_decarbox PF05870 Family 18 1230 153.40 56 90.40 Changed Phenolic acid decarboxylase (PAD)
PB1 PF00564 Domain 47 4338 84.00 17 13.40 Changed PB1 domain
PB1-F2 PF11986 Domain 2 18316 81.90 71 96.91 Changed Influenza A Proapoptotic protein
PBAN PF05874 Family 2 56 130.60 48 83.30 Changed Pheromone biosynthesis activating neuropeptide (PBAN)
PBC PF03792 Family 22 579 158.60 71 47.77 Changed PBC domain
PBCV_basic_adap PF08789 Domain 9 531 37.00 47 20.53 Changed PBCV-specific basic adaptor domain
PBD PF00786 Domain 31 3073 54.10 31 10.77 Changed P21-Rho-binding domain
PBP PF01161 Domain 328 21683 144.90 32 78.47 Changed Phosphatidylethanolamine-binding protein
PBP-Tp47_a PF14889 Domain 23 60 165.10 44 20.56 Changed Penicillin-binding protein Tp47 domain a
PBP-Tp47_c PF14888 Domain 21 60 155.90 52 19.47 Changed Penicillin-binding protein Tp47 domain C
PBP1_TM PF14812 Family 22 3201 77.90 83 9.32 Changed Transmembrane domain of transglycosylase PBP1 at N-terminal
PBP5_C PF07943 Domain 66 18972 92.70 32 23.34 Changed Penicillin-binding protein 5, C-terminal domain
PBP_dimer PF03717 Domain 74 46119 181.10 27 27.54 Changed Penicillin-binding Protein dimerisation domain
PBP_GOBP PF01395 Domain 226 2860 109.60 15 69.27 Changed PBP/GOBP family
PBP_like PF12727 Family 135 2055 189.40 31 50.20 Changed PBP superfamily domain
PBP_like_2 PF12849 Family 147 31142 263.60 23 78.22 Changed PBP superfamily domain
PBP_N PF17093 Family 2 6 125.30 63 17.41 New Penicillin-binding protein N-terminus
PBP_sp32 PF07222 Family 3 74 200.00 51 46.25 Changed Proacrosin binding protein sp32
PBS_linker_poly PF00427 Family 225 1259 124.90 41 45.11 Changed Phycobilisome Linker polypeptide
PC-Esterase PF13839 Family 67 3202 237.30 23 55.80 Changed GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
PC4 PF02229 Domain 192 3187 50.60 45 53.82 Changed Transcriptional Coactivator p15 (PC4)
PCAF_N PF06466 Domain 30 274 214.50 54 31.49 Changed PCAF (P300/CBP-associated factor) N-terminal domain
PCB_OB PF17092 Family 301 6877 111.60 38 13.46 New Penicillin-binding protein OB-like domain
Pcc1 PF09341 Family 227 750 77.40 24 64.58 Changed Transcription factor Pcc1
PCDO_beta_N PF12391 Family 77 2209 33.90 53 14.02 Changed Protocatechuate 3,4-dioxygenase beta subunit N terminal
PCEMA1 PF07418 Family 4 377 176.10 30 72.84 Changed Acidic phosphoprotein precursor PCEMA1
PcF PF09461 Domain 7 53 44.00 45 38.77 Changed Phytotoxin PcF protein
PcfJ PF14284 Family 32 1998 154.00 27 37.05 Changed PcfJ-like protein
PcfK PF14058 Family 18 1006 121.60 32 67.05 Changed PcfK-like protein
PCI PF01399 Family 71 9041 109.90 16 22.17 Changed PCI domain
PCIF1_WW PF12237 Family 35 289 170.00 38 25.17 Changed Phosphorylated CTD interacting factor 1 WW domain
PCM1_C PF15717 Family 16 181 449.50 51 30.48 New Pericentriolar material 1 C terminus
PCMD PF13201 Domain 106 1156 247.20 26 55.82 Changed Putative carbohydrate metabolism domain
PCMT PF01135 Family 9 10628 196.10 37 81.90 Changed Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PCNA_C PF02747 Domain 6 1594 118.50 31 46.19 Changed Proliferating cell nuclear antigen, C-terminal domain
PCNA_N PF00705 Domain 7 1611 118.70 31 44.79 Changed Proliferating cell nuclear antigen, N-terminal domain
PCNP PF15473 Family 13 173 133.20 55 71.79 Changed PEST, proteolytic signal-containing nuclear protein family
PCP PF02429 Domain 9 453 140.10 70 79.74 Changed Peridinin-chlorophyll A binding protein
PCP_red PF08369 Family 141 863 45.90 44 11.04 Changed Proto-chlorophyllide reductase 57 kD subunit
PcrB PF01884 Domain 4 5243 222.40 75 97.72 Changed PcrB family
PCRF PF03462 Domain 1598 38452 183.00 40 53.12 Changed PCRF domain
PCYCGC PF13798 Family 13 376 151.50 57 90.16 Changed Protein of unknown function with PCYCGC motif
PC_rep PF01851 Repeat 125 2702 34.50 27 7.21 Changed Proteasome/cyclosome repeat
PD-C2-AF1 PF09310 Domain 7 115 173.20 42 68.64 Changed POU domain, class 2, associating factor 1
PD40 PF07676 Repeat 97 52601 34.50 24 17.12 Changed WD40-like Beta Propeller Repeat
Pdase_C33_assoc PF14756 Domain 4 903 123.30 89 8.68 Changed Peptidase_C33-associated domain
PDCD2_C PF04194 Domain 219 958 175.10 24 44.57 Changed Programmed cell death protein 2, C-terminal putative domain
PDCD7 PF16021 Family 17 196 221.30 30 59.59 New Programmed cell death protein 7
PDCD9 PF07147 Family 23 312 272.40 26 64.31 Changed Mitochondrial 28S ribosomal protein S30 (PDCD9)
PDDEXK_1 PF12705 Domain 256 29902 254.80 18 26.05 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_10 PF07788 Family 14 137 70.60 36 28.38 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_2 PF12784 Domain 33 5265 182.50 21 74.74 Changed PD-(D/E)XK nuclease family transposase
PDDEXK_3 PF13366 Domain 58 924 107.50 34 72.00 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_4 PF14281 Domain 29 752 174.50 19 47.38 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_5 PF11645 Family 1 72 123.20 25 86.49 Changed PD-(D/E)XK endonuclease
PDDEXK_6 PF04720 Family 105 545 187.70 31 63.40 Changed PDDEXK-like family of unknown function
PDDEXK_7 PF04411 Domain 17 463 155.00 27 22.96 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_9 PF08011 Family 41 3354 96.90 28 20.88 Changed PD-(D/E)XK nuclease superfamily
PDE6_gamma PF04868 Family 7 163 77.10 79 89.97 Changed Retinal cGMP phosphodiesterase, gamma subunit
PDE8 PF08629 Family 3 41 43.70 62 5.68 Changed PDE8 phosphodiesterase
PDEase_I PF00233 Domain 331 4136 219.10 31 32.17 Changed 3'5'-cyclic nucleotide phosphodiesterase
PDEase_II PF02112 Family 4 671 243.00 26 73.62 Changed cAMP phosphodiesterases class-II
PDEase_I_N PF08499 Family 23 344 59.80 68 10.70 Changed 3'5'-cyclic nucleotide phosphodiesterase N-terminal
PDGF PF00341 Domain 32 1170 80.70 34 32.25 Changed PDGF/VEGF domain
PDGF_N PF04692 Family 26 187 73.00 44 33.94 Changed Platelet-derived growth factor, N terminal region
PDGLE PF13190 Domain 110 651 87.00 27 35.82 Changed PDGLE domain
PDH PF02153 Family 8 18117 245.50 29 66.72 Changed Prephenate dehydrogenase
PDR_assoc PF08370 Family 187 1045 63.70 39 4.93 Changed Plant PDR ABC transporter associated
PDR_CDR PF06422 Family 476 2754 88.20 27 7.34 Changed CDR ABC transporter
PDT PF00800 Family 96 18097 179.00 36 55.52 Changed Prephenate dehydratase
PduV-EutP PF10662 Domain 16 6074 130.80 49 90.68 Changed Ethanolamine utilisation - propanediol utilisation
PDU_like PF15953 Family 8 1428 149.80 66 93.12 New Putative propanediol utilisation
PdxA PF04166 Family 477 10935 288.30 45 87.41 Changed Pyridoxal phosphate biosynthetic protein PdxA
PdxJ PF03740 Domain 423 7909 233.60 58 95.82 Changed Pyridoxal phosphate biosynthesis protein PdxJ
PDZ PF00595 Domain 44 48255 80.90 24 16.62 Changed PDZ domain (Also known as DHR or GLGF)
PDZ_1 PF12812 Domain 32 898 76.50 29 13.51 Changed PDZ-like domain
PDZ_2 PF13180 Domain 32 74587 86.40 24 20.51 Changed PDZ domain
PDZ_assoc PF10600 Domain 25 407 65.20 51 8.83 Changed PDZ-associated domain of NMDA receptors
PE PF00934 Family 262 140246 90.40 48 19.34 Changed PE family
PE-PPE PF08237 Domain 21 16696 225.50 43 44.76 Changed PE-PPE domain
Pea-VEAacid PF08111 Family 2 2 15.00 93 93.75 Changed Pea-VEAacid family
PEARLI-4 PF05278 Family 6 151 214.20 24 51.70 Changed Arabidopsis phospholipase-like protein (PEARLI 4)
Pecanex_C PF05041 Family 23 430 201.50 52 12.92 Changed Pecanex protein (C-terminus)
Pectate_lyase PF03211 Family 87 1338 190.00 36 65.30 Changed Pectate lyase
Pectate_lyase22 PF14583 Domain 3 818 370.10 63 95.45 Changed Oligogalacturonate lyase
Pectate_lyase_2 PF06917 Family 3 317 519.90 59 97.31 Changed Periplasmic pectate lyase
Pectate_lyase_3 PF12708 Family 86 9266 234.80 31 49.25 Changed Pectate lyase superfamily protein
Pectinesterase PF01095 Family 28 8243 209.40 30 51.96 Changed Pectinesterase
Pec_lyase PF09492 Family 11 406 242.10 32 56.69 Changed Pectic acid lyase
Pec_lyase_C PF00544 Domain 5 3043 187.10 28 44.32 Changed Pectate lyase
Pec_lyase_N PF04431 Family 40 170 54.90 36 13.37 Changed Pectate lyase, N terminus
Pedibin PF08182 Family 3 4 34.80 43 7.55 Changed Pedibin/Hym-346 family
PEGA PF08308 Domain 20 2847 67.70 22 20.28 Changed PEGA domain
PEGSRP PF07623 Motif 2 21 26.30 68 21.71 Changed Protein of unknown function (DUF1584)
PEHE PF15275 Family 47 427 131.60 26 17.28 Changed PEHE domain
PelD_GGDEF PF16963 Domain 18 321 125.20 55 27.81 New PelD GGDEF domain
PelG PF16933 Family 72 603 434.10 40 93.12 New Putative exopolysaccharide Exporter (EPS-E)
Pellino PF04710 Family 21 424 323.70 53 91.13 Changed Pellino
PELOTA_1 PF15608 Domain 46 1487 82.10 53 21.28 Changed PELOTA RNA binding domain
PemK_toxin PF02452 Family 173 40285 107.10 25 76.10 Changed PemK-like, MazF-like toxin of type II toxin-antitoxin system
PEMT PF04191 Family 86 8683 102.20 26 49.21 Changed Phospholipid methyltransferase
PEN-2 PF10251 Family 45 249 86.40 37 72.21 Changed Presenilin enhancer-2 subunit of gamma secretase
Penaeidin PF05927 Family 8 57 72.10 65 97.14 Changed Penaeidin
Penicillinase_R PF03965 Family 46 16960 111.70 31 87.16 Changed Penicillinase repressor
Penicil_amidase PF01804 Family 349 4943 680.20 24 92.74 Changed Penicillin amidase
Pentapeptide PF00805 Repeat 95 32229 38.40 32 25.69 Changed Pentapeptide repeats (8 copies)
Pentapeptide_2 PF01469 Repeat 55 339481 39.90 48 38.70 Changed Pentapeptide repeats (8 copies)
Pentapeptide_3 PF13576 Repeat 130 986 47.70 27 18.10 Changed Pentapeptide repeats (9 copies)
Pentapeptide_4 PF13599 Repeat 45 22328 78.10 16 33.74 Changed Pentapeptide repeats (9 copies)
Pentaxin PF00354 Domain 8 1444 182.40 28 28.02 Changed Pentaxin family
PEP-utilisers_N PF05524 Family 914 27479 120.80 30 18.38 Changed PEP-utilising enzyme, N-terminal
PEP-utilizers PF00391 Family 1484 50624 74.70 32 10.86 Changed PEP-utilising enzyme, mobile domain
PEP-utilizers_C PF02896 Domain 15 37805 298.50 38 42.75 Changed PEP-utilising enzyme, TIM barrel domain
Pep3_Vps18 PF05131 Family 132 604 148.40 25 15.40 Changed Pep3/Vps18/deep orange family
PEPcase PF00311 Family 55 10738 630.40 42 85.15 Changed Phosphoenolpyruvate carboxylase
PEPcase_2 PF14010 Family 17 177 458.10 37 98.78 Changed Phosphoenolpyruvate carboxylase
PEPCK PF00821 Family 216 6233 443.20 58 96.03 Changed Phosphoenolpyruvate carboxykinase
PEPCK_ATP PF01293 Family 279 13002 448.80 55 86.61 Changed Phosphoenolpyruvate carboxykinase
Pepsin-I3 PF06394 Domain 6 97 68.40 28 54.10 Changed Pepsin inhibitor-3-like repeated domain
PepSY PF03413 Domain 180 29405 65.60 23 31.10 Changed Peptidase propeptide and YPEB domain
PepSY_2 PF13670 Domain 39 2343 82.10 27 80.31 Changed Peptidase propeptide and YPEB domain
PepSY_like PF11396 Domain 42 3010 80.90 21 64.92 Changed Putative beta-lactamase-inhibitor-like, PepSY-like
PepSY_TM PF03929 Family 572 15580 358.00 21 75.54 Changed PepSY-associated TM region
PepSY_TM_like_2 PF16357 Family 12 1097 187.50 27 90.60 New Putative PepSY_TM-like
Peptidase_A17 PF05380 Family 205 1353 124.20 26 12.76 Changed Pao retrotransposon peptidase
Peptidase_A21 PF03566 Family 3 27 643.40 76 98.19 Changed Peptidase family A21
Peptidase_A22B PF04258 Family 14 1745 258.50 28 64.58 Changed Signal peptide peptidase
Peptidase_A24 PF01478 Family 79 16887 109.10 27 51.37 Changed Type IV leader peptidase family
Peptidase_A25 PF03418 Family 18 1777 212.70 33 94.81 Changed Germination protease
Peptidase_A2B PF12384 Family 2 27 136.20 22 20.78 Changed Ty3 transposon peptidase
Peptidase_A2E PF12382 Family 2 12 137.00 97 10.28 Changed Retrotransposon peptidase
Peptidase_A3 PF02160 Family 2 142 186.00 58 31.95 Changed Cauliflower mosaic virus peptidase (A3)
Peptidase_A4 PF01828 Family 137 482 193.80 30 74.07 Changed Peptidase A4 family
Peptidase_A6 PF01829 Domain 1 9 356.90 57 88.12 Changed Peptidase A6 family
Peptidase_A8 PF01252 Family 877 19877 141.40 38 83.37 Changed Signal peptidase (SPase) II
Peptidase_C1 PF00112 Domain 157 12552 199.10 28 50.67 Changed Papain family cysteine protease
Peptidase_C10 PF01640 Domain 90 945 190.70 30 34.72 Changed Peptidase C10 family
Peptidase_C101 PF16218 Family 19 165 232.80 52 71.18 New Peptidase family C101
Peptidase_C108 PF04327 Family 360 7906 102.40 50 94.95 Changed Cysteine peptidase C108, N-terminal of ribosomal L27
Peptidase_C11 PF03415 Family 6 884 328.50 19 66.05 Changed Clostripain family
Peptidase_C12 PF01088 Domain 406 2192 194.10 29 64.78 Changed Ubiquitin carboxyl-terminal hydrolase, family 1
Peptidase_C13 PF01650 Family 34 2746 218.50 29 49.60 Changed Peptidase C13 family
Peptidase_C14 PF00656 Domain 115 8027 235.20 16 45.80 Changed Caspase domain
Peptidase_C15 PF01470 Domain 7 10210 197.20 50 92.75 Changed Pyroglutamyl peptidase
Peptidase_C16 PF01831 Family 1 214 245.50 74 4.34 Changed Peptidase C16 family
Peptidase_C1_2 PF03051 Family 13 4940 364.30 35 94.23 Changed Peptidase C1-like family
Peptidase_C2 PF00648 Family 194 4049 261.50 26 34.02 Changed Calpain family cysteine protease
Peptidase_C21 PF05381 Family 2 52 107.00 35 5.68 Changed Tymovirus endopeptidase
Peptidase_C23 PF05379 Domain 3 176 86.90 34 5.04 Changed Carlavirus endopeptidase
Peptidase_C24 PF03510 Family 5 142 103.40 42 5.15 Changed 2C endopeptidase (C24) cysteine protease family
Peptidase_C25 PF01364 Domain 77 705 318.40 19 35.91 Changed Peptidase family C25
Peptidase_C25_C PF03785 Domain 7 62 79.50 42 9.26 Changed Peptidase family C25, C terminal ig-like domain
Peptidase_C26 PF07722 Domain 37 10737 206.80 36 78.80 Changed Peptidase C26
Peptidase_C27 PF05407 Family 1 75 165.80 97 11.32 Changed Rubella virus endopeptidase
Peptidase_C28 PF05408 Family 1 624 196.10 83 11.51 Changed Foot-and-mouth virus L-proteinase
Peptidase_C3 PF00548 Family 6 5564 138.60 48 11.31 Changed 3C cysteine protease (picornain 3C)
Peptidase_C30 PF05409 Family 6 1017 282.80 51 5.18 Changed Coronavirus endopeptidase C30
Peptidase_C31 PF05410 Family 3 386 104.80 91 4.18 Changed Porcine arterivirus-type cysteine proteinase alpha
Peptidase_C32 PF05411 Family 4 481 125.60 60 5.57 Changed Equine arteritis virus putative proteinase
Peptidase_C33 PF05412 Family 4 951 106.00 70 6.15 Changed Equine arterivirus Nsp2-type cysteine proteinase
Peptidase_C34 PF05413 Family 5 20 92.00 75 4.89 Changed Putative closterovirus papain-like endopeptidase
Peptidase_C36 PF05415 Family 1 9 103.40 68 4.88 Changed Beet necrotic yellow vein furovirus-type papain-like endopeptidase
Peptidase_C37 PF05416 Family 5 836 508.30 78 30.88 Changed Southampton virus-type processing peptidase
Peptidase_C39 PF03412 Family 36 11526 123.60 22 23.67 Changed Peptidase C39 family
Peptidase_C39_2 PF13529 Domain 127 11216 148.80 31 48.89 Changed Peptidase_C39 like family
Peptidase_C3G PF12381 Family 3 50 203.70 30 9.74 Changed Tungro spherical virus-type peptidase
Peptidase_C4 PF00863 Family 2 1471 228.00 51 9.06 Changed Peptidase family C4
Peptidase_C41 PF05417 Family 1 247 149.90 74 9.60 Changed Hepatitis E cysteine protease
Peptidase_C42 PF05533 Domain 8 276 75.60 63 9.47 Changed Beet yellows virus-type papain-like endopeptidase C42
Peptidase_C47 PF05543 Family 4 8457 173.20 70 44.62 Changed Staphopain peptidase C47
Peptidase_C48 PF02902 Domain 27 7414 167.00 16 31.43 Changed Ulp1 protease family, C-terminal catalytic domain
Peptidase_C5 PF00770 Domain 4 194 173.00 65 85.80 Changed Adenovirus endoprotease
Peptidase_C50 PF03568 Family 144 688 326.40 26 21.45 Changed Peptidase family C50
Peptidase_C53 PF05550 Domain 1 1094 147.40 77 16.53 Changed Pestivirus Npro endopeptidase C53
Peptidase_C54 PF03416 Family 211 1230 264.70 32 60.00 Changed Peptidase family C54
Peptidase_C57 PF03290 Family 10 88 423.80 69 98.85 Changed Vaccinia virus I7 processing peptidase
Peptidase_C58 PF03543 Family 14 433 177.60 21 19.20 Changed Yersinia/Haemophilus virulence surface antigen
Peptidase_C6 PF00851 Family 3 1672 396.60 46 18.34 Changed Helper component proteinase
Peptidase_C62 PF12380 Family 1 13 284.00 95 6.70 Changed Gill-associated viral 3C-like peptidase
Peptidase_C65 PF10275 Family 21 939 202.30 25 54.14 Changed Peptidase C65 Otubain
Peptidase_C69 PF03577 Family 11 5262 353.10 31 77.89 Changed Peptidase family C69
Peptidase_C7 PF01830 Family 1 133 110.20 51 30.06 Changed Peptidase C7 family
Peptidase_C70 PF12385 Family 4 36 152.30 41 34.50 Changed Papain-like cysteine protease AvrRpt2
Peptidase_C71 PF12386 Family 3 4 145.50 33 55.48 Changed Pseudomurein endo-isopeptidase Pei
Peptidase_C74 PF12387 Family 1 253 187.00 70 5.80 Changed Pestivirus NS2 peptidase
Peptidase_C78 PF07910 Family 38 812 190.60 30 42.72 Changed Peptidase family C78
Peptidase_C8 PF03569 Family 1 18 161.60 79 15.59 Changed Peptidase family C8
Peptidase_C80 PF11713 Domain 13 1136 164.10 34 7.73 Changed Peptidase C80 family
Peptidase_C9 PF01707 Family 3 470 196.80 60 8.39 Changed Peptidase family C9
Peptidase_C92 PF05708 Family 17 8131 151.20 36 67.54 Changed Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
Peptidase_C93 PF06035 Family 54 2485 148.50 36 69.56 Changed Bacterial transglutaminase-like cysteine proteinase BTLCP
Peptidase_C97 PF05903 Domain 32 1583 134.70 31 42.01 Changed PPPDE putative peptidase domain
Peptidase_C98 PF15499 Family 24 98 235.20 55 26.29 Changed Ubiquitin-specific peptidase-like, SUMO isopeptidase
Peptidase_G2 PF11962 Domain 7 433 202.70 43 34.02 Changed Peptidase_G2, IMC autoproteolytic cleavage domain
Peptidase_M1 PF01433 Family 27 20246 339.70 26 43.60 Changed Peptidase family M1
Peptidase_M10 PF00413 Domain 66 6707 178.50 22 48.76 Changed Matrixin
Peptidase_M10_C PF08548 Domain 16 1708 194.80 30 29.68 Changed Peptidase M10 serralysin C terminal
Peptidase_M11 PF05548 Family 6 320 239.90 22 39.16 Changed Gametolysin peptidase M11
Peptidase_M13 PF01431 Family 9 8596 193.50 43 30.38 Changed Peptidase family M13
Peptidase_M13_N PF05649 Family 918 9106 351.60 25 56.21 Changed Peptidase family M13
Peptidase_M14 PF00246 Domain 70 12774 221.50 21 49.89 Changed Zinc carboxypeptidase
Peptidase_M15 PF01427 Family 4 8248 149.40 33 83.67 Changed D-ala-D-ala dipeptidase
Peptidase_M15_2 PF05951 Family 10 4589 149.90 69 65.84 Changed Bacterial protein of unknown function (DUF882)
Peptidase_M15_3 PF08291 Domain 12 2875 116.10 27 50.44 Changed Peptidase M15
Peptidase_M15_4 PF13539 Family 214 3907 70.60 32 30.47 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_M16 PF00675 Family 24 38135 135.80 22 22.30 Changed Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 Domain 139 56090 179.30 16 37.42 Changed Peptidase M16 inactive domain
Peptidase_M16_M PF16187 Family 370 5239 274.40 44 29.07 New Middle or third domain of peptidase_M16
Peptidase_M17 PF00883 Domain 820 21843 305.30 44 64.05 Changed Cytosol aminopeptidase family, catalytic domain
Peptidase_M17_N PF02789 Domain 73 15305 124.80 28 25.27 Changed Cytosol aminopeptidase family, N-terminal domain
Peptidase_M18 PF02127 Family 8 5966 402.00 37 93.25 Changed Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M19 PF01244 Domain 42 6888 320.10 27 88.96 Changed Membrane dipeptidase (Peptidase family M19)
Peptidase_M2 PF01401 Family 67 1204 470.70 35 85.41 Changed Angiotensin-converting enzyme
Peptidase_M20 PF01546 Family 366 134626 321.70 15 78.55 Changed Peptidase family M20/M25/M40
Peptidase_M22 PF00814 Family 113 39621 229.30 27 79.29 Changed Glycoprotease family
Peptidase_M23 PF01551 Family 247 74438 98.60 32 21.34 Changed Peptidase family M23
Peptidase_M24 PF00557 Domain 445 77244 218.50 27 61.01 Changed Metallopeptidase family M24
Peptidase_M24_C PF16188 Domain 670 4999 61.30 40 10.23 New C-terminal region of peptidase_M24
Peptidase_M26_C PF07580 Family 8 1308 601.10 39 41.17 Changed M26 IgA1-specific Metallo-endopeptidase C-terminal region
Peptidase_M26_N PF05342 Family 6 1071 235.90 38 13.65 Changed M26 IgA1-specific Metallo-endopeptidase N-terminal region
Peptidase_M27 PF01742 Family 4 248 378.80 39 32.99 Changed Clostridial neurotoxin zinc protease
Peptidase_M28 PF04389 Family 56 18362 205.60 24 44.26 Changed Peptidase family M28
Peptidase_M29 PF02073 Family 264 9277 382.70 47 95.09 Changed Thermophilic metalloprotease (M29)
Peptidase_M3 PF01432 Family 29 32995 396.10 26 64.39 Changed Peptidase family M3
Peptidase_M30 PF10460 Family 6 144 285.30 21 51.19 Changed Peptidase M30
Peptidase_M32 PF02074 Family 1 3395 469.80 39 97.47 Changed Carboxypeptidase Taq (M32) metallopeptidase
Peptidase_M35 PF02102 Family 4 513 287.00 30 91.28 Changed Deuterolysin metalloprotease (M35) family
Peptidase_M36 PF02128 Family 119 1017 323.20 28 49.37 Changed Fungalysin metallopeptidase (M36)
Peptidase_M3_N PF08439 Family 538 16429 68.10 34 11.35 Changed Oligopeptidase F
Peptidase_M4 PF01447 Domain 112 8752 144.70 46 27.41 Changed Thermolysin metallopeptidase, catalytic domain
Peptidase_M41 PF01434 Family 27 24536 205.30 43 31.09 Changed Peptidase family M41
Peptidase_M42 PF05343 Family 48 25384 288.00 37 81.94 Changed M42 glutamyl aminopeptidase
Peptidase_M43 PF05572 Family 4 1181 146.80 27 26.30 Changed Pregnancy-associated plasma protein-A
Peptidase_M44 PF03410 Family 8 94 526.80 72 99.88 Changed Metallopeptidase from vaccinia pox
Peptidase_M48 PF01435 Domain 21 42051 189.80 23 55.47 Changed Peptidase family M48
Peptidase_M48_N PF16491 Domain 331 2275 174.00 26 41.43 New CAAX prenyl protease N-terminal, five membrane helices
Peptidase_M49 PF03571 Family 115 1597 320.60 23 67.12 Changed Peptidase family M49
Peptidase_M4_C PF02868 Domain 57 8811 151.30 50 28.84 Changed Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M50 PF02163 Family 52 30618 318.70 23 83.20 Changed Peptidase family M50
Peptidase_M50B PF13398 Family 73 5149 215.30 71 86.43 Changed Peptidase M50B-like
Peptidase_M54 PF07998 Family 5 472 127.60 28 53.66 Changed Peptidase family M54
Peptidase_M55 PF04951 Family 140 1498 254.90 36 96.50 Changed D-aminopeptidase
Peptidase_M56 PF05569 Domain 12 11410 263.30 34 53.23 Changed BlaR1 peptidase M56
Peptidase_M57 PF12388 Family 5 123 192.20 28 57.53 Changed Dual-action HEIGH metallo-peptidase
Peptidase_M6 PF05547 Domain 5 1951 464.90 32 57.19 Changed Immune inhibitor A peptidase M6
Peptidase_M60 PF13402 Domain 29 3855 363.50 26 31.34 Changed Peptidase M60, enhancin and enhancin-like
Peptidase_M61 PF05299 Family 189 2257 116.60 48 20.24 Changed M61 glycyl aminopeptidase
Peptidase_M64 PF09471 Family 9 703 246.90 33 49.93 Changed IgA Peptidase M64
Peptidase_M66 PF10462 Family 10 921 282.40 47 29.26 Changed Peptidase M66
Peptidase_M7 PF02031 Domain 2 155 132.70 50 64.28 Changed Streptomyces extracellular neutral proteinase (M7) family
Peptidase_M73 PF12389 Family 14 1202 172.00 40 84.89 Changed Camelysin metallo-endopeptidase
Peptidase_M74 PF03411 Family 86 4158 233.40 70 83.16 Changed Penicillin-insensitive murein endopeptidase
Peptidase_M75 PF09375 Family 169 10747 253.80 41 75.39 Changed Imelysin
Peptidase_M76 PF09768 Family 134 635 168.00 37 68.53 Changed Peptidase M76 family
Peptidase_M8 PF01457 Family 8 1724 303.00 21 67.78 Changed Leishmanolysin
Peptidase_M85 PF13678 Family 8 618 246.90 92 75.43 Changed NFkB-p65-degrading zinc protease
Peptidase_M9 PF01752 Family 28 1535 305.60 36 36.89 Changed Collagenase
Peptidase_M90 PF06167 Family 119 4296 239.70 61 90.32 Changed Glucose-regulated metallo-peptidase M90
Peptidase_M91 PF14891 Family 13 431 162.90 33 42.90 Changed Effector protein
Peptidase_M99 PF17033 Domain 2 500 223.30 63 49.73 New Carboxypeptidase controlling helical cell shape
Peptidase_M9_N PF08453 Family 42 1403 175.40 32 20.80 Changed Peptidase family M9 N-terminal
Peptidase_MA_2 PF13485 Domain 2 152 181.70 21 44.34 Changed Peptidase MA superfamily
Peptidase_Mx PF15887 Family 99 2433 238.40 72 69.20 New Putative zinc-binding metallo-peptidase
Peptidase_Mx1 PF15890 Family 66 469 241.30 30 78.24 New Putative zinc-binding metallo-peptidase
Peptidase_S10 PF00450 Domain 57 8237 336.00 22 77.88 Changed Serine carboxypeptidase
Peptidase_S11 PF00768 Domain 11 39497 236.10 31 61.55 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_S13 PF02113 Family 9 11527 315.20 30 89.76 Changed D-Ala-D-Ala carboxypeptidase 3 (S13) family
Peptidase_S15 PF02129 Family 48 14821 261.10 30 45.25 Changed X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S21 PF00716 Family 5 261 271.20 31 49.01 Changed Assemblin (Peptidase family S21)
Peptidase_S24 PF00717 Domain 177 78889 71.30 24 32.76 Changed Peptidase S24-like
Peptidase_S26 PF10502 Domain 25 11639 95.10 34 34.48 Changed Signal peptidase, peptidase S26
Peptidase_S28 PF05577 Domain 12 2459 332.50 23 80.27 Changed Serine carboxypeptidase S28
Peptidase_S29 PF02907 Domain 9 17261 146.00 88 17.60 Changed Hepatitis C virus NS3 protease
Peptidase_S3 PF00944 Domain 2 1093 113.50 69 12.81 Changed Alphavirus core protein
Peptidase_S30 PF01577 Family 26 1862 217.50 28 11.54 Changed Potyvirus P1 protease
Peptidase_S31 PF05578 Family 1 304 183.60 90 6.68 Changed Pestivirus NS3 polyprotein peptidase S31
Peptidase_S32 PF05579 Family 6 481 298.70 67 11.77 Changed Equine arteritis virus serine endopeptidase S32
Peptidase_S37 PF05576 Family 1 303 410.40 45 92.34 Changed PS-10 peptidase S37
Peptidase_S39 PF02122 Family 15 571 168.10 34 36.50 Changed Peptidase S39
Peptidase_S41 PF03572 Family 120 27996 170.40 29 32.81 Changed Peptidase family S41
Peptidase_S41_N PF11918 Domain 48 4847 96.70 37 43.58 Changed N-terminal domain of Peptidase_S41 in eukaryotic IRBP
Peptidase_S46 PF10459 Family 45 1393 635.50 37 96.50 Changed Peptidase S46
Peptidase_S48 PF03574 Family 3 246 145.20 82 79.73 Changed Peptidase family S48
Peptidase_S49 PF01343 Family 17 28674 151.30 28 45.65 Changed Peptidase family S49
Peptidase_S49_N PF08496 Family 112 5319 147.40 59 43.40 Changed Peptidase family S49 N-terminal
Peptidase_S51 PF03575 Domain 22 5937 196.90 38 83.71 Changed Peptidase family S51
Peptidase_S55 PF05580 Family 255 1627 196.80 42 49.84 Changed SpoIVB peptidase S55
Peptidase_S58 PF03576 Family 240 4973 316.90 39 92.80 Changed Peptidase family S58
Peptidase_S6 PF02395 Family 3 3984 479.90 29 50.36 Changed Immunoglobulin A1 protease
Peptidase_S64 PF08192 Family 20 114 428.00 27 71.54 Changed Peptidase family S64
Peptidase_S66 PF02016 Family 728 9457 283.70 32 90.92 Changed LD-carboxypeptidase
Peptidase_S68 PF10461 Family 11 68 32.60 66 3.88 Changed Peptidase S68
Peptidase_S7 PF00949 Family 10 4286 148.70 68 4.65 Changed Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S74 PF13884 Domain 243 2856 56.60 30 7.63 Changed Chaperone of endosialidase
Peptidase_S76 PF13611 Domain 6 105 125.80 35 6.71 Changed Serine peptidase of plant viral polyprotein, P1
Peptidase_S77 PF03420 Family 2 156 171.80 43 77.74 Changed Prohead core protein serine protease
Peptidase_S78 PF04586 Family 15 7686 153.40 29 60.85 Changed Caudovirus prohead serine protease
Peptidase_S78_2 PF14550 Family 17 306 118.30 38 38.62 Changed Putative phage serine protease XkdF
Peptidase_S8 PF00082 Domain 45 45884 282.70 20 47.06 Changed Subtilase family
Peptidase_S80 PF07230 Family 2 1675 205.40 63 97.14 Changed Bacteriophage T4-like capsid assembly protein (Gp20)
Peptidase_S8_N PF16361 Family 55 203 139.60 30 16.39 New N-terminal of Subtilase family
Peptidase_S9 PF00326 Domain 64 29517 199.70 23 33.18 Changed Prolyl oligopeptidase family
Peptidase_S9_N PF02897 Domain 30 11890 388.10 30 57.28 Changed Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_U32 PF01136 Family 97 36014 231.70 30 57.89 Changed Peptidase family U32
Peptidase_U32_C PF16325 Domain 423 13031 82.50 41 19.29 New Peptidase family U32 C-terminal domain
Peptidase_U4 PF03419 Family 141 1208 270.40 28 96.11 Changed Sporulation factor SpoIIGA
Peptidase_U40 PF10464 Family 1 36 179.00 93 96.76 Changed Peptidase U40
Peptidase_U49 PF10463 Family 4 58 193.90 20 60.99 Changed Peptidase U49
Peptidase_U57 PF05582 Family 76 911 264.50 50 97.84 Changed YabG peptidase U57
Pept_tRNA_hydro PF01195 Domain 1087 19851 182.30 42 94.33 Changed Peptidyl-tRNA hydrolase
PepX_C PF08530 Domain 24 13960 226.60 27 37.90 Changed X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PepX_N PF09168 Domain 32 1348 143.20 45 19.35 Changed X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Pep_deformylase PF01327 Domain 84 30098 155.60 36 89.22 Changed Polypeptide deformylase
PEP_hydrolase PF09370 Domain 81 890 256.20 59 79.66 Changed Phosphoenolpyruvate hydrolase-like
Pep_M12B_propep PF01562 Family 393 4016 128.10 23 15.55 Changed Reprolysin family propeptide
PEP_mutase PF13714 Domain 83 12327 235.30 37 82.70 Changed Phosphoenolpyruvate phosphomutase
Per1 PF04080 Family 165 688 238.10 36 75.73 Changed Per1-like
PerB PF06590 Family 2 16 102.00 90 100.00 Changed PerB protein
PerC PF06069 Family 4 3794 72.80 40 67.76 Changed PerC transcriptional activator
Pericardin_rpt PF07054 Repeat 19 323 33.10 68 38.85 Changed Pericardin like repeat
Perilipin PF03036 Family 51 718 269.80 25 67.57 Changed Perilipin family
Period_C PF12114 Family 29 330 181.70 38 16.14 Changed Period protein 2/3C-terminal region
Peripla_BP_1 PF00532 Domain 6 27326 262.20 20 80.08 Changed Periplasmic binding proteins and sugar binding domain of LacI family
Peripla_BP_2 PF01497 Domain 27 80185 234.30 19 73.92 Changed Periplasmic binding protein
Peripla_BP_3 PF13377 Domain 85 99768 160.60 23 47.30 Changed Periplasmic binding protein-like domain
Peripla_BP_4 PF13407 Family 170 52770 254.60 21 77.16 Changed Periplasmic binding protein domain
Peripla_BP_5 PF13433 Domain 38 3093 361.30 49 87.73 Changed Periplasmic binding protein domain
Peripla_BP_6 PF13458 Family 181 29141 334.00 23 85.56 Changed Periplasmic binding protein
Periviscerokin PF08259 Family 3 198 10.80 75 99.03 Changed Periviscerokinin family
Perm-CXXC PF15629 Family 27 105 31.50 53 1.98 Changed Permuted single zf-CXXC unit
peroxidase PF00141 Family 161 25618 276.50 28 80.70 Changed Peroxidase
Peroxidase_2 PF01328 Family 1 954 140.20 25 42.20 Changed Peroxidase, family 2
Peroxin-13_N PF04088 Family 93 469 152.30 38 38.35 Changed Peroxin 13, N-terminal region
Peroxin-22 PF12827 Family 25 64 115.10 32 65.57 Changed Peroxisomal biogenesis protein family
Peroxin-3 PF04882 Family 102 756 277.70 19 86.49 Changed Peroxin-3
Pertactin PF03212 Family 8 12998 113.70 27 13.29 Changed Pertactin
Pertus-S4-tox PF09275 Domain 1 51 109.80 96 81.44 Changed Pertussis toxin S4 subunit
Pertus-S5-tox PF09276 Domain 1 50 97.00 96 80.18 Changed Pertussis toxin S5 subunit
Pertussis_S1 PF02917 Domain 2 267 184.20 42 54.86 Changed Pertussis toxin, subunit 1
Pertussis_S2S3 PF02918 Domain 3 252 109.30 49 57.35 Changed Pertussis toxin, subunit 2 and 3, C-terminal domain
Pes-10 PF07149 Family 9 20 247.90 19 91.44 Changed Pes-10
Pescadillo_N PF06732 Family 38 709 250.10 45 44.55 Changed Pescadillo N-terminus
Pesticin PF16754 Domain 3 138 228.70 63 61.90 New Bacterial toxin homologue of phage lysozyme
Pestivirus_E2 PF16329 Domain 1 1829 186.90 57 30.40 New Pestivirus envelope glycoprotein E2
PET PF06297 Domain 42 788 93.30 43 16.74 Changed PET Domain
PET117 PF15786 Family 100 355 68.10 37 72.90 New PET assembly of cytochrome c oxidase, mitochondrial
PET122 PF05476 Family 7 45 248.10 45 92.66 Changed PET122
Pet127 PF08634 Domain 102 286 271.90 49 33.40 Changed Mitochondrial protein Pet127
Pet191_N PF10203 Family 75 487 65.10 42 56.02 Changed Cytochrome c oxidase assembly protein PET191
Pet20 PF08692 Family 15 168 93.90 26 38.93 Changed Mitochondrial protein Pet20
PetG PF02529 Family 15 1094 34.70 83 93.27 Changed Cytochrome B6-F complex subunit 5
PetL PF05115 Family 21 1146 30.40 67 90.27 Changed Cytochrome B6-F complex subunit VI (PetL)
PetM PF08041 Family 25 229 30.10 47 45.45 Changed PetM family of cytochrome b6f complex subunit 7
PetN PF03742 Family 16 2067 25.90 90 97.86 Changed PetN
PEX-1N PF09262 Domain 117 518 80.40 35 7.43 Changed Peroxisome biogenesis factor 1, N-terminal
PEX-2N PF09263 Domain 17 83 79.20 50 6.85 Changed Peroxisome biogenesis factor 1, N-terminal
PEX11 PF05648 Family 49 1611 205.70 18 82.36 Changed Peroxisomal biogenesis factor 11 (PEX11)
Pex14_N PF04695 Family 147 823 124.30 26 31.91 Changed Peroxisomal membrane anchor protein (Pex14p) conserved region
Pex16 PF08610 Family 116 533 303.60 27 85.37 Changed Peroxisomal membrane protein (Pex16)
Pex19 PF04614 Family 85 632 230.30 24 74.05 Changed Pex19 protein family
Pex24p PF06398 Family 52 1150 281.40 21 43.96 Changed Integral peroxisomal membrane peroxin
Pex26 PF07163 Family 11 101 259.60 49 85.58 Changed Pex26 protein
Pex2_Pex12 PF04757 Family 111 1604 215.90 17 57.26 Changed Pex2 / Pex12 amino terminal region
PE_PPE_C PF12484 Family 89 45429 82.40 33 21.69 Changed Polymorphic PE/PPE proteins C terminal
PFEMP PF03011 Domain 11 2271 135.30 24 14.59 Changed PFEMP DBL domain
Pfg27 PF09216 Domain 2 30 171.40 54 42.42 Changed Pfg27
PFK PF00365 Domain 861 22352 282.90 41 80.01 Changed Phosphofructokinase
PfkB PF00294 Family 52 118351 283.10 19 86.57 Changed pfkB family carbohydrate kinase
PFL-like PF02901 Family 126 24419 582.90 40 80.10 Changed Pyruvate formate lyase-like
PFO_beta_C PF12367 Family 136 5059 67.00 79 23.31 Changed Pyruvate ferredoxin oxidoreductase beta subunit C terminal
PFU PF09070 Domain 143 683 106.90 38 14.85 Changed PFU (PLAA family ubiquitin binding)
PfUIS3 PF11567 Family 2 24 98.80 64 44.93 Changed Plasmodium falciparum UIS3 membrane protein
Pga1 PF10333 Family 14 156 168.40 19 75.58 Changed GPI-Mannosyltransferase II co-activator
PGA2 PF07543 Family 29 214 116.90 29 77.43 Changed Protein trafficking PGA2
PgaD PF13994 Family 23 3244 124.70 42 88.02 Changed PgaD-like protein
PGAMP PF07644 Family 4 13 32.30 57 13.25 Changed Planctomycete PGAMP
PGAP1 PF07819 Family 20 5044 151.90 18 28.80 Changed PGAP1-like protein
PgaPase_1 PF06162 Family 6 33 149.30 35 69.36 Changed Putative pyroglutamyl peptidase PgaPase_1
PGA_cap PF09587 Domain 118 7664 244.10 28 62.33 Changed Bacterial capsule synthesis protein PGA_cap
PGBA_C PF15437 Family 2 783 81.10 65 24.66 Changed Plasminogen-binding protein pgbA C-terminal
PGBA_N PF15436 Family 20 485 212.40 56 60.37 Changed Plasminogen-binding protein pgbA N-terminal
PGC7_Stella PF15549 Family 18 79 150.10 34 84.12 Changed PGC7/Stella/Dppa3 domain
PGDH_C PF16896 Domain 17 196 153.20 59 55.88 New Phosphogluconate dehydrogenase (decarboxylating) C-term
PGDYG PF14083 Family 7 131 99.90 75 69.44 Changed PGDYG protein
PGG PF13962 Domain 187 3735 108.90 26 30.00 Changed Domain of unknown function
PGI PF00342 Domain 7 24059 365.60 37 81.46 Changed Phosphoglucose isomerase
PGK PF00162 Domain 949 21331 368.00 50 94.48 Changed Phosphoglycerate kinase
PglL_A PF15864 Domain 39 1559 25.90 55 4.63 New Protein glycosylation ligase
PglZ PF08665 Domain 10 1323 176.90 26 24.05 Changed PglZ domain
PGM_PMM_I PF02878 Domain 80 57123 135.70 33 27.81 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II PF02879 Domain 63 55478 103.40 27 21.02 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III PF02880 Domain 447 55556 116.20 24 23.66 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV PF00408 Family 66 52387 79.20 22 16.15 Changed Phosphoglucomutase/phosphomannomutase, C-terminal domain
PgpA PF04608 Family 171 8552 142.00 39 86.31 Changed Phosphatidylglycerophosphatase A
PGPGW PF09656 Family 21 581 51.50 34 38.62 Changed Putative transmembrane protein (PGPGW)
PGP_phosphatase PF09419 Family 15 759 150.10 29 71.60 Changed Mitochondrial PGP phosphatase
PG_binding_1 PF01471 Domain 206 33889 56.20 26 14.41 Changed Putative peptidoglycan binding domain
PG_binding_2 PF08823 Domain 9 179 71.80 26 22.88 Changed Putative peptidoglycan binding domain
PG_binding_3 PF09374 Domain 7 4936 79.90 44 42.61 Changed Predicted Peptidoglycan domain
PG_binding_4 PF12229 Domain 117 5521 116.10 16 34.51 Changed Putative peptidoglycan binding domain
PH PF00169 Domain 112 28479 104.50 17 13.56 Changed PH domain
Ph1570 PF09638 Domain 2 19 145.20 62 98.29 Changed Ph1570 protein
PHA-1 PF06542 Family 9 124 337.70 28 73.71 Changed Regulator protein PHA-1
PhaC_N PF07167 Family 30 2608 165.80 44 29.31 Changed Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
Phage-A118_gp45 PF10653 Family 1 60 61.10 87 100.00 Changed Protein gp45 of Bacteriophage A118
Phage-Gp8 PF09215 Domain 2 99 264.10 41 66.80 Changed Bacteriophage T4, Gp8
Phage-MuB_C PF09077 Domain 16 362 77.20 55 25.44 Changed Mu B transposition protein, C terminal
Phage-scaffold PF09306 Domain 2 395 282.50 55 96.61 Changed Bacteriophage, scaffolding protein
Phage-tail_1 PF09097 Domain 1 48 194.70 56 49.33 Changed Baseplate structural protein, domain 1
Phage-tail_2 PF09096 Domain 1 42 170.90 59 43.18 Changed Baseplate structural protein, domain 2
Phage-tail_3 PF13550 Domain 51 7592 155.80 46 15.68 Changed Putative phage tail protein
PhageMin_Tail PF10145 Family 254 15179 211.10 25 16.91 Changed Phage-related minor tail protein
PhageP22-tail PF09251 Domain 2 166 529.60 78 81.64 Changed Salmonella phage P22 tail-spike
Phageshock_PspD PF09584 Family 12 3176 60.70 84 83.29 Changed Phage shock protein PspD (Phageshock_PspD)
Phageshock_PspG PF09583 Family 18 3454 63.60 80 80.27 Changed Phage shock protein G (Phageshock_PspG)
Phage_1_1 PF08200 Family 6 47 41.90 46 84.95 Changed Bacteriophage 1.1 Protein
Phage_30_3 PF08010 Family 3 118 137.00 51 88.07 Changed Bacteriophage protein GP30.3
Phage_30_8 PF06019 Family 2 40 112.30 66 99.27 Changed Phage GP30.8 protein
Phage_AlpA PF05930 Family 14 12373 50.40 35 67.74 Changed Prophage CP4-57 regulatory protein (AlpA)
Phage_antitermQ PF06530 Family 1 4513 114.90 53 91.05 Changed Phage antitermination protein Q
Phage_antiter_Q PF06323 Family 7 2590 211.50 69 96.12 Changed Phage antitermination protein Q
Phage_ASH PF10554 Family 19 2864 94.60 40 42.87 Changed Ash protein family
Phage_attach PF05354 Domain 3 3148 109.10 78 99.05 Changed Phage Head-Tail Attachment
Phage_B PF02304 Family 1 264 114.10 85 97.55 Changed Scaffold protein B
Phage_base_V PF04717 Family 25 4429 109.10 42 54.91 Changed Type VI secretion system, phage-baseplate injector
Phage_BR0599 PF09356 Family 78 974 74.70 40 28.94 Changed Phage conserved hypothetical protein BR0599
Phage_C PF12025 Family 1 353 59.90 92 78.87 Changed Phage protein C
Phage_capsid PF05065 Family 75 20123 257.10 20 66.89 Changed Phage capsid family
Phage_Capsid_P3 PF09018 Domain 1 7 394.00 100 99.75 Changed P3 major capsid protein
Phage_cap_E PF03864 Family 76 5583 296.30 40 96.24 Changed Phage major capsid protein E
Phage_cap_P2 PF05125 Family 49 3596 313.00 50 93.80 Changed Phage major capsid protein, P2 family
Phage_CII PF05269 Family 3 2430 82.60 43 92.25 Changed Bacteriophage CII protein
Phage_CI_C PF16452 Domain 15 1380 100.70 36 49.06 New Bacteriophage CI repressor C-terminal domain
Phage_CI_repr PF07022 Domain 14 2392 64.20 35 34.74 Changed Bacteriophage CI repressor helix-turn-helix domain
Phage_clamp_A PF16790 Domain 2 133 129.30 30 81.95 New Bacteriophage clamp loader A subunit
Phage_coat PF09063 Domain 2 2 127.00 96 99.61 Changed Phage PP7 coat protein
Phage_Coat_A PF05357 Domain 3 105 58.90 46 17.85 Changed Phage Coat Protein A
Phage_Coat_B PF05356 Family 2 96 81.30 88 99.83 Changed Phage Coat protein B
Phage_Coat_Gp8 PF05371 Family 7 84 52.50 54 67.56 Changed Phage major coat protein, Gp8
Phage_connector PF05352 Family 4 52 264.80 37 84.88 Changed Phage Connector (GP10)
Phage_connect_1 PF05135 Domain 43 11924 91.30 26 88.32 Changed Phage gp6-like head-tail connector protein
Phage_Cox PF10743 Family 6 1165 79.90 51 84.62 Changed Regulatory phage protein cox
Phage_CP76 PF06892 Family 13 1496 153.50 64 92.01 Changed Phage regulatory protein CII (CP76)
Phage_CRI PF05144 Family 13 987 223.90 35 65.08 Changed Phage replication protein CRI
Phage_DNA_bind PF02303 Domain 8 154 80.40 40 84.21 Changed Helix-destabilising protein
Phage_DsbA PF11126 Family 2 58 66.70 51 73.87 Changed Transcriptional regulator DsbA
Phage_endo_I PF05367 Domain 6 107 136.70 47 97.84 Changed Phage endonuclease I
Phage_F PF02305 Domain 7 3128 200.20 39 99.33 Changed Capsid protein (F protein)
Phage_fiber PF03335 Repeat 17 10263 13.80 49 13.18 Changed Phage tail fibre repeat
Phage_fiber_2 PF03406 Repeat 46 9989 41.40 63 14.53 Changed Phage tail fibre repeat
Phage_fiber_C PF06820 Family 2 4417 59.30 66 42.38 Changed Putative prophage tail fibre C-terminus
Phage_FRD3 PF05798 Family 1 42 75.30 79 99.18 Changed Bacteriophage FRD3 protein
Phage_G PF02306 Domain 1 849 156.10 93 99.97 Changed Major spike protein (G protein)
Phage_glycop_gL PF11108 Family 5 41 101.60 32 59.93 Changed Viral glycoprotein L
Phage_Gp111 PF07410 Family 2 28 99.50 32 71.80 Changed Streptococcus thermophilus bacteriophage Gp111 protein
Phage_Gp15 PF06854 Family 22 521 163.00 27 88.93 Changed Bacteriophage Gp15 protein
Phage_Gp19 PF09355 Domain 8 416 110.40 41 81.21 Changed Phage protein Gp19/Gp15/Gp42
Phage_GP20 PF06810 Family 21 1319 145.60 28 75.27 Changed Phage minor structural protein GP20
Phage_Gp23 PF10669 Family 1 31 117.50 92 70.27 Changed Protein gp23 (Bacteriophage A118)
Phage_gp49_66 PF13876 Family 22 1310 86.20 47 67.22 Changed Phage protein (N4 Gp49/phage Sf6 gene 66) family
Phage_gp53 PF11246 Family 2 135 161.40 26 74.72 Changed Base plate wedge protein 53
Phage_GPA PF05840 Family 11 5073 333.60 37 50.63 Changed Bacteriophage replication gene A protein (GPA)
Phage_GPD PF05954 Family 89 21607 277.10 21 46.23 Changed Phage late control gene D protein (GPD)
Phage_GPL PF05926 Family 42 3264 136.00 46 86.29 Changed Phage head completion protein (GPL)
Phage_GPO PF05929 Family 31 3359 264.70 46 96.71 Changed Phage capsid scaffolding protein (GPO) serine peptidase
Phage_head_chap PF11113 Family 10 64 54.70 43 50.18 Changed Head assembly gene product
Phage_head_fibr PF11133 Family 3 127 128.40 23 81.84 Changed Head fiber protein
Phage_HK97_TLTM PF06120 Family 4 2093 198.90 41 23.58 Changed Tail length tape measure protein
Phage_holin_1 PF04531 Family 25 6840 78.90 63 74.71 Changed Bacteriophage holin
Phage_holin_2_1 PF04971 Family 1 5913 65.50 82 94.50 Changed Bacteriophage P21 holin S
Phage_holin_2_2 PF10746 Family 3 101 56.90 40 84.35 Changed Phage holin T7 family, holin superfamily II
Phage_holin_2_3 PF16080 Family 22 1740 54.00 47 73.67 New Bacteriophage holin family HP1
Phage_holin_2_4 PF16082 Family 7 699 81.30 45 88.61 New Bacteriophage holin family, superfamily II-like
Phage_holin_3_1 PF05106 Family 38 2736 96.80 35 89.86 Changed Phage holin family (Lysis protein S)
Phage_holin_3_2 PF04550 Family 14 998 85.00 70 90.34 Changed Phage holin family 2
Phage_holin_3_3 PF16083 Family 58 2420 80.30 38 75.60 New LydA holin phage, holin superfamily III
Phage_holin_3_5 PF16085 Family 3 343 111.40 72 95.48 New Bacteriophage holin Hol, superfamily III
Phage_holin_3_6 PF07332 Domain 323 7563 112.90 35 77.93 Changed Putative Actinobacterial Holin-X, holin superfamily III
Phage_holin_3_7 PF05449 Domain 25 1803 80.00 40 86.25 Changed Putative 3TM holin, Phage_holin_3
Phage_holin_4_1 PF05105 Family 151 3167 113.70 27 81.65 Changed Bacteriophage holin family
Phage_holin_4_2 PF04020 Family 528 4927 111.20 39 81.30 Changed Mycobacterial 4 TMS phage holin, superfamily IV
Phage_holin_5_1 PF06946 Family 2 88 90.20 44 97.55 Changed Bacteriophage A118-like holin, Hol118
Phage_holin_5_2 PF16079 Family 67 684 68.20 40 77.90 New Phage holin family Hol44, in holin superfamily V
Phage_holin_6_1 PF09682 Family 16 779 99.40 33 83.12 Changed Bacteriophage holin of superfamily 6 (Holin_LLH)
Phage_holin_7_1 PF16081 Family 2 111 123.50 39 88.16 New Mycobacterial 2 TMS Phage Holin (M2 Hol) Family
Phage_holin_8 PF16931 Family 16 1588 120.30 33 95.52 New Putative phage holin
Phage_holin_Dp1 PF16938 Family 10 761 62.60 64 90.15 New Putative phage holin Dp-1
Phage_holin_T PF11031 Family 2 66 200.70 46 96.60 Changed Bacteriophage T holin
Phage_hub_GP28 PF11110 Family 6 48 147.70 45 84.23 Changed Baseplate hub distal subunit
Phage_H_T_join PF05521 Family 131 8626 96.60 29 84.70 Changed Phage head-tail joining protein
Phage_integrase PF00589 Family 24 190646 165.80 20 50.91 Changed Phage integrase family
Phage_Integr_2 PF13009 Family 14 154 310.20 34 34.01 Changed Putative phage integrase
Phage_integr_3 PF16795 Domain 10 83 149.70 29 54.97 New Archaeal phage integrase
Phage_integ_N PF09003 Domain 13 4374 69.90 45 19.28 Changed Bacteriophage lambda integrase, N-terminal domain
Phage_int_SAM_1 PF02899 Domain 30 44773 83.30 25 27.61 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_2 PF12834 Domain 9 1964 88.30 49 34.57 Changed Phage integrase, N-terminal
Phage_int_SAM_3 PF14659 Domain 74 23878 57.00 22 15.59 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4 PF13495 Domain 41 8991 84.80 23 27.78 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_5 PF13102 Domain 60 2705 143.70 17 38.99 Changed Phage integrase SAM-like domain
Phage_lambda_P PF06992 Family 1 2992 190.00 61 94.20 Changed Replication protein P
Phage_lysis PF03245 Domain 10 8442 113.20 55 81.35 Changed Bacteriophage Rz lysis protein
Phage_lysozyme PF00959 Domain 14 14423 109.60 31 63.13 Changed Phage lysozyme
Phage_mat-A PF03863 Family 2 306 209.20 46 90.85 Changed Phage maturation protein
Phage_min_cap2 PF06152 Family 26 651 315.40 24 77.79 Changed Phage minor capsid protein 2
Phage_min_tail PF05939 Family 42 6620 103.30 50 96.60 Changed Phage minor tail protein
Phage_Mu_F PF04233 Family 13 14347 105.40 27 35.25 Changed Phage Mu protein F like protein
Phage_Mu_Gam PF07352 Family 56 1647 149.20 29 85.18 Changed Bacteriophage Mu Gam like protein
Phage_Mu_Gp45 PF06890 Family 27 1577 151.60 37 81.83 Changed Bacteriophage Mu Gp45 protein
Phage_NinH PF06322 Family 3 1033 59.60 70 92.46 Changed Phage NinH protein
Phage_Nu1 PF07471 Family 4 4019 142.50 56 84.09 Changed Phage DNA packaging protein Nu1
Phage_Orf51 PF06194 Family 2 9131 77.60 92 99.57 Changed Phage Conserved Open Reading Frame 51
Phage_P2_GpE PF06528 Family 22 2542 36.90 54 84.04 Changed Phage P2 GpE
Phage_P2_GpU PF06995 Family 109 4752 118.80 42 65.38 Changed Phage P2 GpU
Phage_portal PF04860 Family 315 17220 299.50 23 77.81 Changed Phage portal protein
Phage_portal_2 PF05136 Family 100 6125 324.40 41 70.20 Changed Phage portal protein, lambda family
Phage_pRha PF09669 Family 123 6761 86.40 31 36.91 Changed Phage regulatory protein Rha (Phage_pRha)
Phage_prot_Gp6 PF05133 Family 53 7928 394.00 28 87.83 Changed Phage portal protein, SPP1 Gp6-like
Phage_r1t_holin PF16945 Family 9 486 65.00 40 86.07 New Putative lactococcus lactis phage r1t holin
Phage_rep_O PF04492 Family 25 3520 92.40 46 34.45 Changed Bacteriophage replication protein O
Phage_rep_org_N PF09681 Family 19 2365 117.50 44 44.80 Changed N-terminal phage replisome organiser (Phage_rep_org_N)
Phage_RpbA PF10789 Family 8 56 101.50 34 85.94 Changed Phage RNA polymerase binding, RpbA
Phage_sheath_1 PF04984 Family 41 12168 279.70 19 94.38 Changed Phage tail sheath protein
Phage_SSB PF16773 Domain 3 60 116.30 83 98.17 New Lactococcus phage single-stranded DNA binding protein
Phage_stabilise PF11134 Family 4 653 444.70 82 97.42 Changed Phage stabilisation protein
Phage_T4_gp19 PF06841 Family 67 1239 137.60 21 83.29 Changed T4-like virus tail tube protein gp19
Phage_T4_Gp30_7 PF06919 Family 1 51 121.40 68 98.91 Changed Phage Gp30.7 protein
Phage_T4_gp36 PF03903 Family 1 96 158.90 26 29.53 Changed Phage T4 tail fibre
Phage_T4_Ndd PF06591 Family 2 42 148.50 58 98.28 Changed T4-like phage nuclear disruption protein (Ndd)
Phage_T7_Capsid PF05396 Family 6 72 121.00 37 41.67 Changed Phage T7 capsid assembly protein
Phage_T7_tail PF03906 Family 3 314 152.50 26 25.45 Changed Phage T7 tail fibre protein
Phage_TAC_1 PF06222 Family 6 1165 105.00 75 98.20 Changed Phage tail assembly chaperone
Phage_TAC_10 PF10963 Family 15 378 82.00 51 91.22 Changed Phage tail assembly chaperone
Phage_TAC_11 PF11836 Family 60 546 96.70 49 84.77 Changed Phage tail tube protein, GTA-gp10
Phage_TAC_12 PF12363 Family 14 4511 111.40 44 84.39 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_13 PF16459 Family 31 630 118.60 44 80.56 New Phage tail assembly chaperone, TAC
Phage_TAC_14 PF16462 Family 4 81 111.30 53 91.68 New Phage tail assembly chaperone protein, TAC
Phage_TAC_2 PF06894 Family 4 4570 122.20 54 91.01 Changed Bacteriophage lambda tail assembly chaperone, TAC, protein G
Phage_TAC_3 PF06896 Family 5 124 113.80 28 91.59 Changed Phage tail assembly chaperone proteins, TAC
Phage_TAC_4 PF08748 Domain 16 426 101.50 33 95.50 Changed Phage tail assembly chaperone
Phage_TAC_5 PF08890 Family 49 1020 134.50 32 92.34 Changed Phage XkdN-like tail assembly chaperone protein, TAC
Phage_TAC_6 PF09550 Family 18 273 51.10 36 73.55 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_7 PF10109 Family 52 4759 81.90 29 78.62 Changed Phage tail assembly chaperone proteins, E, or 41 or 14
Phage_TAC_8 PF10666 Family 2 50 132.10 57 99.04 Changed Phage tail assembly chaperone protein Gp14 ()A118
Phage_TAC_9 PF10876 Family 4 37 126.10 47 93.71 Changed Phage tail assemb.y chaperone protein, TAC
Phage_tail_2 PF06199 Family 30 4608 134.10 40 74.19 Changed Phage tail tube protein
Phage_tail_3 PF08813 Family 11 582 153.20 28 73.65 Changed Phage tail tube protein, TTP
Phage_tail_APC PF16778 Domain 79 281 63.30 35 44.52 New Phage tail assembly chaperone protein
Phage_tail_L PF05100 Family 5 8336 167.30 62 86.81 Changed Phage minor tail protein L
phage_tail_N PF08400 Family 3 4100 119.20 74 22.54 Changed Prophage tail fibre N-terminal
Phage_tail_NK PF16532 Domain 3 605 172.80 91 79.12 New Sf6-type phage tail needle knob or tip of some Caudovirales
Phage_tail_S PF05069 Family 23 5297 128.40 28 91.66 Changed Phage virion morphogenesis family
Phage_tail_T PF06223 Family 5 4671 96.20 63 78.76 Changed Minor tail protein T
Phage_tail_U PF06141 Family 12 4728 126.30 67 98.12 Changed Phage minor tail protein U
Phage_tail_X PF05489 Domain 9 5833 58.60 41 34.79 Changed Phage Tail Protein X
Phage_terminase PF10668 Domain 3 667 62.10 36 25.51 Changed Phage terminase small subunit
Phage_term_sma PF07141 Family 2 58 173.00 92 98.44 Changed Putative bacteriophage terminase small subunit
Phage_term_smal PF05944 Family 45 3242 129.60 48 55.03 Changed Phage small terminase subunit
Phage_Treg PF04761 Family 2 56 56.40 72 95.78 Changed Lactococcus bacteriophage putative transcription regulator
Phage_TTP_1 PF04630 Family 14 3807 174.50 61 80.47 Changed Phage tail tube protein
Phage_TTP_11 PF16460 Family 2 604 126.40 48 82.30 New Phage tail tube, TTP, lambda-like
Phage_TTP_12 PF16461 Family 2 4827 143.80 79 63.65 New Lambda phage tail tube protein, TTP
Phage_TTP_13 PF16463 Family 3 79 136.50 72 81.83 New Phage tail tube protein family
Phage_tube PF04985 Family 106 4701 163.70 41 96.89 Changed Phage tail tube protein FII
Phage_X PF05155 Family 8 1223 88.30 34 30.32 Changed Phage X family
Phage_XkdX PF09693 Family 38 7971 39.60 64 71.07 Changed Phage uncharacterised protein (Phage_XkdX)
PhaG_MnhG_YufB PF03334 Family 490 12290 81.70 50 63.59 Changed Na+/H+ antiporter subunit
PhaP_Bmeg PF09602 Family 4 220 163.60 86 94.07 Changed Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)
Phasin PF05597 Family 36 1643 127.20 46 70.11 Changed Poly(hydroxyalcanoate) granule associated protein (phasin)
Phasin_2 PF09361 Domain 247 2224 99.00 18 64.70 Changed Phasin protein
PHAT PF09246 Domain 4 31 108.80 41 12.01 Changed PHAT
PHA_gran_rgn PF09650 Family 47 697 88.30 42 92.41 Changed Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)
PHA_synth_III_E PF09712 Family 19 265 213.70 22 75.26 Changed Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
PHBC_N PF12551 Family 62 363 42.60 43 7.19 Changed Poly-beta-hydroxybutyrate polymerase N terminal
PHB_acc PF05233 Domain 102 1212 39.90 38 29.43 Changed PHB accumulation regulatory domain
PHB_acc_N PF07879 Domain 75 1122 60.40 55 32.44 Changed PHB/PHA accumulation regulator DNA-binding domain
PHB_depo_C PF06850 Family 11 1054 200.40 50 47.36 Changed PHB de-polymerase C-terminus
PHC2_SAM_assoc PF16616 Disordered 15 181 112.30 50 13.40 New Unstructured region on Polyhomeotic-like protein 1 and 2
PHD PF00628 Domain 74 14670 50.10 30 5.98 Changed PHD-finger
PHD20L1_u1 PF16660 Disordered 2 67 94.60 82 10.76 New PHD finger protein 20-like protein 1
PhdYeFM_antitox PF02604 Domain 80 39972 69.20 22 75.45 Changed Antitoxin Phd_YefM, type II toxin-antitoxin system
PHD_2 PF13831 Family 26 2364 35.40 47 3.44 Changed PHD-finger
PHD_3 PF13922 Domain 8 245 65.00 54 4.52 Changed PHD domain of transcriptional enhancer, Asx
PHD_4 PF16866 Domain 30 421 65.50 46 6.47 New PHD-finger
PHD_like PF12910 Domain 7 62 123.10 30 91.97 Changed Antitoxin of toxin-antitoxin, RelE / RelB, TA system
PHD_Oberon PF07227 Family 41 484 122.40 35 19.63 Changed PHD - plant homeodomain finger protein
Phenol_Hydrox PF02332 Domain 87 2402 189.70 32 62.93 Changed Methane/Phenol/Toluene Hydroxylase
Phenol_hyd_sub PF06099 Family 17 299 56.40 53 63.24 Changed Phenol hydroxylase subunit
Phenol_MetA_deg PF13557 Family 152 5532 235.30 18 78.22 Changed Putative MetA-pathway of phenol degradation
Phenol_monoox PF04663 Family 18 303 65.70 51 55.31 Changed Phenol hydroxylase conserved region
Phenyl_P_gamma PF09662 Family 2 9 80.70 48 94.78 Changed Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma)
Pheromone PF08015 Family 38 87 59.70 24 91.60 Changed Fungal mating-type pheromone
Phe_hydrox_dim PF07976 Family 263 1081 167.20 25 26.44 Changed Phenol hydroxylase, C-terminal dimerisation domain
Phe_tRNA-synt_N PF02912 Domain 921 18672 70.60 39 20.74 Changed Aminoacyl tRNA synthetase class II, N-terminal domain
Phe_ZIP PF08916 Domain 37 232 56.30 48 9.24 Changed Phenylalanine zipper
PHF12_MRG_bd PF16737 Domain 19 139 39.60 60 4.62 New PHD finger protein 12 MRG binding domain
PHF5 PF03660 Family 42 577 101.40 71 82.85 Changed PHF5-like protein
Phg_2220_C PF09524 Domain 37 3371 71.70 68 26.30 Changed Conserved phage C-terminus (Phg_2220_C)
Phi-29_GP16_7 PF06720 Family 1 7 131.00 50 98.92 Changed Bacteriophage phi-29 early protein GP16.7
Phi-29_GP3 PF05435 Family 1 8 251.20 57 92.67 Changed Phi-29 DNA terminal protein GP3
Phi-29_GP4 PF05464 Family 1 7 125.40 73 99.32 Changed Phi-29-like late genes activator (early protein GP4)
phiKZ_IP PF12699 Family 14 40 307.10 13 69.21 Changed phiKZ-like phage internal head proteins
PHINT_rpt PF14882 Repeat 21 320 46.80 31 24.29 Changed Phage-integrase repeat unit
Phi_1 PF04674 Family 101 610 221.70 42 83.25 Changed Phosphate-induced protein 1 conserved region
Phlebovirus_G1 PF07243 Family 4 579 353.30 42 49.48 Changed Phlebovirus glycoprotein G1
Phlebovirus_G2 PF07245 Family 4 492 404.40 32 36.82 Changed Phlebovirus glycoprotein G2
Phlebovirus_NSM PF07246 Family 3 174 110.50 38 15.21 Changed Phlebovirus nonstructural protein NS-M
PHM7_cyt PF14703 Domain 194 1848 89.90 24 10.28 Changed Cytosolic domain of 10TM putative phosphate transporter
PHM7_ext PF12621 Family 167 747 93.30 28 9.64 Changed Extracellular tail, of 10TM putative phosphate transporter
PhnA PF03831 Family 159 9445 54.40 71 47.86 Changed PhnA protein
PhnA_Zn_Ribbon PF08274 Domain 31 8400 30.70 65 26.51 Changed PhnA Zinc-Ribbon
PhnG PF06754 Family 100 3271 140.80 61 94.49 Changed Phosphonate metabolism protein PhnG
PhnH PF05845 Family 104 3293 186.90 59 95.72 Changed Bacterial phosphonate metabolism protein (PhnH)
PhnI PF05861 Family 71 3315 346.90 73 97.83 Changed Bacterial phosphonate metabolism protein (PhnI)
PhnJ PF06007 Family 49 3325 271.00 82 95.47 Changed Phosphonate metabolism protein PhnJ
PHO4 PF01384 Family 970 34129 249.80 28 86.97 Changed Phosphate transporter family
Pho86 PF11124 Family 29 66 284.90 41 91.85 Changed Inorganic phosphate transporter Pho86
Pho88 PF10032 Family 95 414 177.50 37 88.82 Changed Phosphate transport (Pho88)
PhoD PF09423 Domain 148 4447 332.60 25 61.37 Changed PhoD-like phosphatase
PhoD_N PF16655 Domain 139 2887 93.80 39 16.70 New PhoD-like phosphatase, N-terminal domain
PhoH PF02562 Domain 131 26261 203.10 51 58.81 Changed PhoH-like protein
PhoLip_ATPase_C PF16212 Family 684 4572 232.20 28 19.19 New Phospholipid-translocating P-type ATPase C-terminal
PhoLip_ATPase_N PF16209 Family 288 4119 67.70 35 5.56 New Phospholipid-translocating ATPase N-terminal
PhoPQ_related PF10142 Family 17 1070 354.20 67 74.10 Changed PhoPQ-activated pathogenicity-related protein
PhoQ_Sensor PF08918 Domain 22 3247 178.70 81 36.98 Changed PhoQ Sensor
Phosducin PF02114 Domain 2 2178 170.00 34 81.95 Changed Phosducin
Phosphatase PF15698 Family 23 150 249.90 56 94.21 New Phosphatase
PhosphMutase PF10143 Family 290 1130 167.10 34 41.82 Changed 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Phosphodiest PF01663 Family 70 9932 284.10 15 56.41 Changed Type I phosphodiesterase / nucleotide pyrophosphatase
Phosphoesterase PF04185 Family 20 12614 331.20 37 66.19 Changed Phosphoesterase family
Phospholamban PF04272 Domain 3 42 52.00 87 97.24 Changed Phospholamban
Phospholip_A2_1 PF00068 Domain 145 2016 105.30 36 62.06 Changed Phospholipase A2
Phospholip_A2_2 PF05826 Family 107 547 90.90 34 35.87 Changed Phospholipase A2
Phospholip_A2_3 PF09056 Domain 64 257 106.90 39 43.39 Changed Prokaryotic phospholipase A2
Phospholip_B PF04916 Family 22 648 412.20 27 86.03 Changed Phospholipase B
Phosphonate-bd PF12974 Family 108 15195 243.60 30 72.99 Changed ABC transporter, phosphonate, periplasmic substrate-binding protein
Phosphoprotein PF00922 Family 1 578 151.40 49 96.99 Changed Vesiculovirus phosphoprotein
Phosphorylase PF00343 Family 611 18930 545.40 38 80.23 Changed Carbohydrate phosphorylase
Phospho_p8 PF10195 Family 30 203 55.90 46 64.38 Changed DNA-binding nuclear phosphoprotein p8
Phostensin PF13914 Domain 13 131 122.20 49 22.73 Changed Phostensin PP1-binding and SH3-binding region
Phostensin_N PF13916 Domain 8 81 80.70 48 14.84 Changed PP1-regulatory protein, Phostensin N-terminal
Phos_pyr_kin PF08543 Family 122 36287 237.40 29 84.45 Changed Phosphomethylpyrimidine kinase
Photo_RC PF00124 Family 42 12227 236.60 51 91.08 Changed Photosynthetic reaction centre protein
PhoU PF01895 Domain 256 52007 86.70 24 48.34 Changed PhoU domain
PhoU_div PF01865 Family 7 7804 204.00 44 97.19 Changed Protein of unknown function DUF47
PHP PF02811 Family 604 54515 211.60 18 25.69 Changed PHP domain
PHP_C PF13263 Domain 100 1586 51.00 27 17.53 Changed PHP-associated
PHR PF08005 Domain 81 849 141.60 37 14.95 Changed PHR domain
PhrC_PhrF PF11131 Family 2 80 37.10 61 94.20 Changed Rap-phr extracellular signalling
PHTB1_C PF14728 Family 28 246 305.60 32 42.65 Changed PTHB1 C-terminus
PHTB1_N PF14727 Family 39 270 342.80 34 50.14 Changed PTHB1 N-terminus
PHtD_u1 PF16645 Disordered 6 724 61.20 57 8.70 New Unstructured region on Pneumococcal histidine triad protein
Phtf-FEM1B_bdg PF12129 Domain 25 257 137.40 55 20.71 Changed Male germ-cell putative homeodomain transcription factor
PHY PF00360 Family 32 6324 154.90 52 27.24 Changed Phytochrome region
Phycobilisome PF00502 Domain 148 5830 99.90 31 79.44 Changed Phycobilisome protein
Phycoerythr_ab PF02972 Family 5 52 56.30 49 44.91 Changed Phycoerythrin, alpha/beta chain
PhyH PF05721 Domain 39 10627 202.90 21 67.67 Changed Phytanoyl-CoA dioxygenase (PhyH)
Phytase PF02333 Domain 3 1050 233.00 34 68.13 Changed Phytase
Phytase-like PF13449 Domain 51 4337 320.30 22 69.34 Changed Esterase-like activity of phytase
Phyto-Amp PF15438 Family 1 29 175.90 70 80.88 Changed Antigenic membrane protein of phytoplasma
Phytochelatin PF05023 Domain 83 522 190.20 38 54.58 Changed Phytochelatin synthase
Phytochelatin_C PF09328 Family 17 170 225.00 46 54.06 Changed Domain of unknown function (DUF1984)
Phytoreo_P8 PF07124 Family 2 19 423.20 64 100.00 Changed Phytoreovirus outer capsid protein P8
Phytoreo_Pns PF05451 Family 2 12 349.90 49 98.73 Changed Phytoreovirus nonstructural protein Pns10/11
Phytoreo_S7 PF07236 Family 2 18 503.20 48 99.63 Changed Phytoreovirus S7 protein
Phyto_Pns9_10 PF05878 Family 2 16 295.70 43 92.73 Changed Phytoreovirus nonstructural protein Pns9/Pns10
PHZA_PHZB PF03284 Domain 4 836 148.20 77 95.22 Changed Phenazine biosynthesis protein A/B
PhzC-PhzF PF02567 Family 11 17520 226.50 26 94.60 Changed Phenazine biosynthesis-like protein
PH_10 PF15411 Domain 143 531 122.10 32 12.55 Changed Pleckstrin homology domain
PH_11 PF15413 Domain 7 286 118.70 31 15.33 Changed Pleckstrin homology domain
PH_12 PF16457 Domain 61 1062 127.30 27 15.63 New Pleckstrin homology domain
PH_13 PF16652 Domain 91 1087 68.70 34 5.53 New Pleckstrin homology domain
PH_2 PF08458 Family 57 325 99.60 40 26.13 Changed Plant pleckstrin homology-like region
PH_3 PF14593 Family 27 406 101.70 40 18.67 Changed PH domain
PH_4 PF15404 Domain 36 186 164.20 37 15.43 Changed Pleckstrin homology domain
PH_5 PF15405 Domain 37 626 138.30 30 10.84 Changed Pleckstrin homology domain
PH_6 PF15406 Domain 12 164 108.10 50 19.69 Changed Pleckstrin homology domain
PH_8 PF15409 Domain 11 630 88.70 41 10.14 Changed Pleckstrin homology domain
PH_9 PF15410 Domain 16 1468 112.90 31 7.42 Changed Pleckstrin homology domain
PH_BEACH PF14844 Domain 33 1579 95.60 25 3.99 Changed PH domain associated with Beige/BEACH
PH_TFIIH PF08567 Domain 102 482 87.30 30 15.11 Changed TFIIH p62 subunit, N-terminal domain
PI-PLC-C1 PF16670 Domain 51 267 270.40 30 72.51 New Phosphoinositide phospholipase C, Ca2+-dependent
PI-PLC-X PF00388 Family 112 8386 145.10 41 26.12 Changed Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 Family 363 3056 113.30 38 12.13 Changed Phosphatidylinositol-specific phospholipase C, Y domain
PI31_Prot_C PF08577 Family 75 423 75.80 37 23.26 Changed PI31 proteasome regulator
PI31_Prot_N PF11566 Family 106 616 143.50 21 41.00 Changed PI31 proteasome regulator N-terminal
PI3Ka PF00613 Family 12 2305 179.40 25 14.38 Changed Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3K_1B_p101 PF10486 Family 17 304 380.40 24 86.85 Changed Phosphoinositide 3-kinase gamma adapter protein p101 subunit
PI3K_C2 PF00792 Domain 17 1416 140.00 22 13.00 Changed Phosphoinositide 3-kinase C2
PI3K_p85B PF02192 Family 51 389 74.50 47 7.61 Changed PI3-kinase family, p85-binding domain
PI3K_P85_iSH2 PF16454 Domain 31 422 154.50 58 28.55 New Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
PI3K_rbd PF00794 Family 12 905 105.40 24 8.96 Changed PI3-kinase family, ras-binding domain
PI3_PI4_kinase PF00454 Family 41 8722 202.60 22 14.10 Changed Phosphatidylinositol 3- and 4-kinase
Picorna_P3A PF06363 Family 1 89 98.70 77 4.56 Changed Picornaviridae P3A protein
Pico_P1A PF02226 Family 2 10964 67.30 60 13.59 Changed Picornavirus coat protein (VP4)
Pico_P2A PF00947 Domain 9 2892 116.20 65 8.04 Changed Picornavirus core protein 2A
Pico_P2B PF01552 Family 2 2178 99.50 60 5.41 Changed Picornavirus 2B protein
PID PF00640 Domain 17 3858 128.00 20 22.30 Changed Phosphotyrosine interaction domain (PTB/PID)
PID_2 PF14719 Domain 9 322 162.90 35 49.11 Changed Phosphotyrosine interaction domain (PTB/PID)
PIEZO PF15917 Family 48 309 197.30 37 10.23 New Piezo
Piezo_RRas_bdg PF12166 Family 103 597 323.00 32 19.81 Changed Piezo non-specific cation channel, R-Ras-binding domain
PIF PF05092 Family 4 132 493.30 45 96.05 Changed Per os infectivity
PIF1 PF05970 Family 13 6127 190.20 20 33.73 Changed PIF1-like helicase
PIG-F PF06699 Family 88 504 180.20 27 68.66 Changed GPI biosynthesis protein family Pig-F
PIG-H PF10181 Family 107 488 68.20 33 28.73 Changed GPI-GlcNAc transferase complex, PIG-H component
PIG-L PF02585 Family 70 20129 135.20 32 49.60 Changed GlcNAc-PI de-N-acetylase
PIG-P PF08510 Family 154 560 128.50 31 50.00 Changed PIG-P
PIG-S PF10510 Family 107 664 421.30 24 84.05 Changed Phosphatidylinositol-glycan biosynthesis class S protein
PIG-U PF06728 Family 58 690 321.60 30 83.12 Changed GPI transamidase subunit PIG-U
PIG-X PF08320 Domain 108 559 191.50 22 51.84 Changed PIG-X / PBN1
PIG-Y PF15159 Family 31 172 70.70 29 47.09 Changed Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PIGA PF08288 Family 23 641 87.50 54 18.68 Changed PIGA (GPI anchor biosynthesis)
Pigment_DH PF06324 Family 2 62 17.90 77 20.35 Changed Pigment-dispersing hormone (PDH)
PigN PF04987 Family 178 658 388.20 27 47.53 Changed Phosphatidylinositolglycan class N (PIG-N)
PIH1 PF08190 Family 15 1027 208.60 15 57.38 Changed pre-RNA processing PIH1/Nop17
Pik1 PF11522 Family 19 183 50.50 49 5.24 Changed Yeast phosphatidylinositol-4-OH kinase Pik1
Pil1 PF13805 Family 26 610 248.10 48 60.95 Changed Eisosome component PIL1
PilI PF10623 Family 2 397 81.10 62 96.32 Changed Plasmid conjugative transfer protein PilI
Pilin PF00114 Domain 145 4302 106.90 22 72.31 Changed Pilin (bacterial filament)
Pilin_GH PF16734 Family 49 267 115.70 22 59.48 New Type IV pilin-like G and H, putative
Pilin_PilA PF14245 Family 7 172 113.70 57 72.44 Changed Type IV pilin PilA
Pilin_PilX PF11530 Family 2 203 127.50 83 80.38 Changed Minor type IV pilin, PilX
PilJ PF13675 Domain 97 8582 99.30 33 17.52 Changed Type IV pili methyl-accepting chemotaxis transducer N-term
PilM PF07419 Family 12 973 133.80 34 91.86 Changed PilM
PilM_2 PF11104 Family 37 2912 321.60 33 90.44 Changed Type IV pilus assembly protein PilM;
PilN PF05137 Family 141 6184 82.00 29 37.89 Changed Fimbrial assembly protein (PilN)
PilO PF04350 Family 52 2792 144.80 33 64.16 Changed Pilus assembly protein, PilO
PilP PF04351 Family 119 2295 142.10 38 80.16 Changed Pilus assembly protein, PilP
PilS PF08805 Domain 6 2050 138.60 35 74.53 Changed PilS N terminal
Pilt PF15453 Family 9 155 161.90 34 51.84 Changed Protein incorporated later into Tight Junctions
Pilus_CpaD PF09476 Family 46 404 181.50 30 83.73 Changed Pilus biogenesis CpaD protein (pilus_cpaD)
PilW PF16074 Family 58 1551 137.70 27 42.66 New Type IV Pilus-assembly protein W
PilX PF13681 Domain 52 473 108.70 31 54.61 Changed Type IV pilus assembly protein PilX C-term
PilX_N PF14341 Family 48 1113 50.70 36 24.85 Changed PilX N-terminal
PilZ PF07238 Domain 191 19608 102.40 18 29.51 Changed PilZ domain
PilZ_2 PF16823 Domain 5 73 139.40 41 74.25 New Atypical PilZ domain, cyclic di-GMP receptor
Pim PF16765 Family 2 29 90.10 66 64.31 New Pesticin immunity protein
PIN PF01850 Domain 111 86558 123.50 18 90.91 Changed PIN domain
Pinin_SDK_memA PF04696 Family 108 561 119.20 28 29.00 Changed pinin/SDK/memA/ protein conserved region
Pinin_SDK_N PF04697 Family 6 148 123.70 56 21.42 Changed pinin/SDK conserved region
PINIT PF14324 Domain 166 804 144.10 34 24.31 Changed PINIT domain
PIN_2 PF10130 Domain 12 161 123.20 24 91.18 Changed PIN domain
PIN_3 PF13470 Domain 63 2484 110.30 21 71.64 Changed PIN domain
PIN_4 PF13638 Domain 107 6649 139.50 33 26.48 Changed PIN domain
PIP49_C PF12260 Family 34 595 184.50 25 47.59 Changed Protein-kinase domain of FAM69
PIP49_N PF14875 Domain 29 262 138.00 33 34.84 Changed N-term cysteine-rich ER, FAM69
PIP5K PF01504 Family 394 3424 260.30 27 28.66 Changed Phosphatidylinositol-4-phosphate 5-Kinase
PipA PF07108 Family 2 1280 187.00 87 89.41 Changed PipA protein
PIR PF00399 Repeat 50 1492 17.30 67 20.92 Changed Yeast PIR protein repeat
Pirin PF02678 Family 38 21814 110.40 36 42.48 Changed Pirin
Pirin_C PF05726 Domain 30 9213 103.30 30 34.95 Changed Pirin C-terminal cupin domain
PIRT PF15099 Family 5 47 129.80 71 93.08 Changed Phosphoinositide-interacting protein family
PITH PF06201 Domain 341 1224 144.90 31 55.81 Changed PITH domain
Piwi PF02171 Family 17 3833 265.60 31 35.11 Changed Piwi domain
PixA PF12306 Family 22 287 165.20 25 93.03 Changed Inclusion body protein
PK PF00224 Family 11 25953 332.80 47 67.80 Changed Pyruvate kinase, barrel domain
PKcGMP_CC PF16808 Domain 10 263 30.60 56 10.47 New Coiled-coil N-terminus of cGMP-dependent protein kinase
PKD PF00801 Domain 42 8686 68.50 24 12.89 Changed PKD domain
PKD_2 PF16407 Family 7 263 156.80 22 30.12 New PKD-like family
PKD_3 PF16820 Family 13 415 66.40 29 19.36 New PKD-like domain
PKD_channel PF08016 Family 12 2051 264.50 17 26.95 Changed Polycystin cation channel
PKI PF02827 Family 29 219 65.60 41 70.65 Changed cAMP-dependent protein kinase inhibitor
pKID PF02173 Family 9 477 40.50 55 13.94 Changed pKID domain
Pkinase PF00069 Domain 38 232632 236.10 20 39.86 Changed Protein kinase domain
Pkinase_C PF00433 Family 516 5518 47.10 30 6.55 Changed Protein kinase C terminal domain
Pkinase_Tyr PF07714 Domain 123 52710 229.60 24 35.85 Changed Protein tyrosine kinase
Pkip-1 PF06878 Family 19 56 162.30 33 93.64 Changed Pkip-1 protein
PKK PF12474 Family 79 637 135.00 33 23.87 Changed Polo kinase kinase
PknG_rubred PF16919 Domain 16 1958 136.60 82 18.15 New Protein kinase G rubredoxin domain
PknG_TPR PF16918 Family 17 2102 336.30 79 44.98 New Protein kinase G tetratricopeptide repeat
PknH_C PF14032 Domain 76 12678 185.90 25 57.75 Changed PknH-like extracellular domain
Pkr1 PF08636 Family 82 304 72.70 42 39.86 Changed ER protein Pkr1
PK_C PF02887 Domain 759 24510 114.10 34 22.68 Changed Pyruvate kinase, alpha/beta domain
PL48 PF15903 Family 17 321 289.70 49 34.09 New Filopodia upregulated, FAM65
PLA1 PF02253 Domain 90 6052 233.50 49 79.48 Changed Phospholipase A1
PLA2G12 PF06951 Family 8 289 159.20 39 72.94 Changed Group XII secretory phospholipase A2 precursor (PLA2G12)
PLA2_B PF01735 Family 15 1669 341.30 27 57.24 Changed Lysophospholipase catalytic domain
PLA2_inh PF02988 Domain 5 124 81.50 34 40.37 Changed Phospholipase A2 inhibitor
PLAC PF08686 Domain 116 980 32.30 39 3.06 Changed PLAC (protease and lacunin) domain
PLAC8 PF04749 Family 391 2230 104.30 26 45.77 Changed PLAC8 family
PLAC9 PF15205 Family 8 49 67.20 62 72.94 Changed Placenta-specific protein 9
Planc_extracel PF07595 Motif 22 77 23.80 39 1.16 Changed Planctomycete extracellular
Plant_all_beta PF10532 Domain 10 27 98.70 32 17.41 Changed Plant specific N-all beta domain
Plant_NMP1 PF06694 Family 5 85 243.00 52 83.73 Changed Plant nuclear matrix protein 1 (NMP1)
Plant_tran PF04827 Family 5 635 111.70 33 35.88 Changed Plant transposon protein
Plant_vir_prot PF01307 Family 9 476 100.70 34 88.58 Changed Plant viral movement protein
Plant_zn_clust PF10533 Domain 45 426 46.20 51 14.82 Changed Plant zinc cluster domain
Plasmid_parti PF01672 Family 40 578 83.20 42 46.27 Changed Putative plasmid partition protein
Plasmid_RAQPRD PF09686 Family 31 1025 77.80 45 69.75 Changed Plasmid protein of unknown function (Plasmid_RAQPRD)
Plasmid_stab_B PF10784 Family 11 2569 70.20 34 58.86 Changed Plasmid stability protein
Plasmodium_HRP PF05403 Family 3 1036 116.90 74 94.94 Changed Plasmodium histidine-rich protein (HRPII/III)
Plasmodium_Vir PF05795 Family 43 846 242.50 13 84.51 Changed Plasmodium vivax Vir protein
Plasmod_dom_1 PF09715 Family 7 117 63.80 39 36.61 Changed Plasmodium protein of unknown function (Plasmod_dom_1)
Plasmod_MYXSPDY PF07981 Repeat 6 70 17.00 78 97.70 Changed Plasmodium repeat_MYXSPDY
Plasmod_Pvs28 PF06247 Family 10 195 193.40 55 88.70 Changed Plasmodium ookinete surface protein Pvs28
PLAT PF01477 Domain 84 5097 109.30 20 17.96 Changed PLAT/LH2 domain
PLATZ PF04640 Family 81 622 72.60 52 30.68 Changed PLATZ transcription factor
PLC-beta_C PF08703 Domain 16 291 156.10 40 14.82 Changed PLC-beta C terminal
PLCC PF14466 Domain 7 73 116.50 41 79.55 Changed PLAT/LH2 and C2-like Ca2+-binding lipoprotein
PLDc PF00614 Family 30 2973 29.60 39 4.09 Changed Phospholipase D Active site motif
PLDc_2 PF13091 Domain 84 86127 137.70 21 44.18 Changed PLD-like domain
PLDc_3 PF13918 Domain 2 757 167.10 38 44.46 Changed PLD-like domain
PLDc_N PF13396 Domain 784 22050 44.50 38 10.50 Changed Phospholipase_D-nuclease N-terminal
PLD_C PF12357 Family 121 577 71.40 46 9.54 Changed Phospholipase D C terminal
Plectin PF00681 Repeat 433 4121 40.80 34 9.03 Changed Plectin repeat
Plexin_cytopl PF08337 Domain 61 1246 416.20 46 32.98 Changed Plexin cytoplasmic RasGAP domain
PliI PF16743 Domain 8 178 118.30 52 75.91 New Periplasmic lysozyme inhibitor of I-type lysozyme
PLN_propep PF16485 Domain 20 310 41.90 49 12.15 New Protealysin propeptide
PLRV_ORF5 PF01690 Family 2 472 256.50 29 60.04 Changed Potato leaf roll virus readthrough protein
PLU-1 PF08429 Family 108 962 298.20 25 21.97 Changed PLU-1-like protein
Plug PF07715 Domain 638 132540 109.30 23 13.95 Changed TonB-dependent Receptor Plug Domain
Plug_translocon PF10559 Domain 137 1242 34.60 51 7.40 Changed Plug domain of Sec61p
Plus-3 PF03126 Domain 212 961 103.30 26 15.35 Changed Plus-3 domain
PM0188 PF11477 Family 3 50 334.70 48 87.70 Changed Sialyltransferase PMO188
PMAIP1 PF15150 Family 7 24 50.90 59 70.05 Changed Phorbol-12-myristate-13-acetate-induced
PmbA_TldD PF01523 Family 1312 20005 291.30 26 63.52 Changed Putative modulator of DNA gyrase
PMBR PF09373 Repeat 49 153 32.40 27 8.63 Changed Pseudomurein-binding repeat
PMC2NT PF08066 Domain 155 546 90.60 27 11.22 Changed PMC2NT (NUC016) domain
PMD PF10536 Domain 65 2413 191.80 18 40.20 Changed Plant mobile domain
PMEI PF04043 Domain 739 3079 145.00 18 43.45 Changed Plant invertase/pectin methylesterase inhibitor
PMG PF05287 Family 11 338 145.70 34 91.34 Changed PMG protein
PMI_typeI PF01238 Family 8 20648 261.40 35 79.15 Changed Phosphomannose isomerase type I
PMM PF03332 Family 9 1287 202.40 36 82.36 Changed Eukaryotic phosphomannomutase
PmoA PF14100 Family 101 330 264.90 23 73.06 Changed Methane oxygenase PmoA
PMP1_2 PF08114 Family 2 60 38.90 60 56.96 Changed ATPase proteolipid family
PMP22_Claudin PF00822 Family 13 3158 162.70 23 75.23 Changed PMP-22/EMP/MP20/Claudin family
Pmp3 PF01679 Family 364 5432 48.70 54 70.57 Changed Proteolipid membrane potential modulator
PMR5N PF14416 Domain 430 2062 54.10 42 12.82 Changed PMR5 N terminal Domain
PmrD PF11183 Family 4 3176 80.50 61 90.72 Changed Polymyxin resistance protein PmrD
PMSI1 PF15322 Family 13 41 260.80 59 87.75 Changed Protein missing in infertile sperm 1, putative
PMSR PF01625 Family 1139 31378 150.60 42 74.21 Changed Peptide methionine sulfoxide reductase
PMT PF02366 Family 19 8381 220.70 31 39.11 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_2 PF13231 Family 41 12962 159.50 17 29.72 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_4TMC PF16192 Family 430 3892 195.70 38 32.44 New C-terminal four TMM region of protein-O-mannosyltransferase
PMT_C PF11647 Family 13 390 66.30 40 2.95 Changed C-terminal region of Pasteurella multocida toxin residues 569-1285
Pneumovirus_M2 PF06436 Family 2 148 155.80 66 82.00 Changed Pneumovirus matrix protein 2 (M2)
Pneumo_att_G PF05539 Family 3 129 188.60 59 99.81 Changed Pneumovirinae attachment membrane glycoprotein G
Pneumo_M2 PF07380 Family 1 76 87.00 73 98.13 Changed Pneumovirus M2 protein
Pneumo_matrix PF03393 Family 2 230 193.70 67 99.04 Changed Pneumovirus matrix protein
Pneumo_ncap PF03246 Family 2 2047 140.70 58 99.85 Changed Pneumovirus nucleocapsid protein
Pneumo_NS1 PF03438 Family 1 77 133.70 89 98.00 Changed Pneumovirus NS1 protein
Pneumo_phosprot PF02478 Family 2 934 112.00 78 90.81 Changed Pneumovirus phosphoprotein
PNGaseA PF12222 Family 22 504 368.10 29 65.30 Changed Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNISR PF15996 Family 28 270 154.90 30 22.89 New Arginine/serine-rich protein PNISR
PNK3P PF08645 Family 26 3178 161.20 40 45.57 Changed Polynucleotide kinase 3 phosphatase
PNKP-ligase_C PF16536 Domain 32 268 59.90 69 7.32 New PNKP adenylyltransferase domain, C-terminal region
PNKP_ligase PF16542 Domain 67 312 301.40 46 38.28 New PNKP adenylyltransferase domain, ligase domain
PNMA PF14893 Family 34 354 243.60 26 53.94 Changed PNMA
PNPase PF03726 Domain 18 18416 81.80 36 11.50 Changed Polyribonucleotide nucleotidyltransferase, RNA binding domain
PNPase_C PF12111 Domain 23 3288 37.00 77 3.53 Changed Polyribonucleotide phosphorylase C terminal
PNPOx_C PF10590 Domain 593 10268 41.00 56 18.69 Changed Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
PNP_UDP_1 PF01048 Domain 114 66466 220.80 20 80.91 Changed Phosphorylase superfamily
PNRC PF15365 Family 25 406 66.00 33 25.09 Changed Proline-rich nuclear receptor coactivator
PNTB PF02233 Family 335 9833 446.10 56 92.67 Changed NAD(P) transhydrogenase beta subunit
PNTB_4TM PF12769 Family 228 9459 85.40 61 25.32 Changed 4TM region of pyridine nucleotide transhydrogenase, mitoch
POC1 PF10450 Family 3 57 244.60 35 98.62 Changed POC1 chaperone
POC3_POC4 PF10448 Family 18 106 146.20 24 96.09 Changed 20S proteasome chaperone assembly proteins 3 and 4
PocR PF10114 Domain 222 3271 156.60 35 40.78 Changed Sensory domain found in PocR
Podoplanin PF05808 Family 13 82 147.20 30 57.42 Changed Podoplanin
Podovirus_Gp16 PF05894 Family 1 48 265.30 34 80.35 Changed Podovirus DNA encapsidation protein (Gp16)
PolC_DP2 PF03833 Family 69 320 698.40 43 68.67 Changed DNA polymerase II large subunit DP2
Pollen_allerg_1 PF01357 Domain 346 2824 77.60 38 32.25 Changed Pollen allergen
Pollen_allerg_2 PF01620 Family 2 96 115.80 47 56.59 Changed Ribonuclease (pollen allergen)
Pollen_Ole_e_I PF01190 Family 98 1216 89.40 23 37.94 Changed Pollen proteins Ole e I like
POLO_box PF00659 Family 251 1393 66.60 25 17.35 Changed POLO box duplicated region
PolyA_pol PF01743 Domain 17 26349 123.90 39 28.48 Changed Poly A polymerase head domain
PolyA_pol_arg_C PF12626 Domain 162 5769 123.00 50 26.65 Changed Polymerase A arginine-rich C-terminus
PolyA_pol_RNAbd PF12627 Domain 222 25628 63.20 30 14.56 Changed Probable RNA and SrmB- binding site of polymerase A
PolyG_pol PF01518 Family 4 193 331.60 54 98.59 Changed Sigma NS protein
Polyhedrin PF00738 Family 3 455 189.80 78 97.32 Changed Polyhedrin
Polyketide_cyc PF03364 Family 95 11774 126.10 28 76.72 Changed Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc2 PF10604 Family 122 33661 143.50 18 80.06 Changed Polyketide cyclase / dehydrase and lipid transport
Polyoma_agno PF01736 Family 1 141 57.70 79 91.40 Changed Polyomavirus agnoprotein
Polyoma_coat PF00718 Domain 1 3999 138.80 59 82.22 Changed Polyomavirus coat protein
Polyoma_coat2 PF00761 Family 8 508 215.70 41 91.80 Changed Polyomavirus coat protein
Polyoma_lg_T_C PF06431 Family 3 1965 126.60 69 64.15 Changed Polyomavirus large T antigen C-terminus
polyprenyl_synt PF00348 Domain 512 46461 248.80 30 77.86 Changed Polyprenyl synthetase
Polysacc_deac_1 PF01522 Family 80 52617 140.20 20 40.18 Changed Polysaccharide deacetylase
Polysacc_deac_2 PF04748 Family 246 5154 204.80 57 66.05 Changed Divergent polysaccharide deacetylase
Polysacc_deac_3 PF15421 Family 5 76 401.10 52 58.20 Changed Putative polysaccharide deacetylase
Polysacc_lyase PF14099 Family 49 444 235.80 17 66.58 Changed Polysaccharide lyase
Polysacc_synt PF01943 Family 18 41504 282.00 16 58.43 Changed Polysaccharide biosynthesis protein
Polysacc_synt_2 PF02719 Family 66 18277 267.50 47 57.66 Changed Polysaccharide biosynthesis protein
Polysacc_synt_3 PF13440 Family 50 2215 251.40 14 57.76 Changed Polysaccharide biosynthesis protein
Polysacc_synt_4 PF04669 Family 28 862 140.00 29 65.36 Changed Polysaccharide biosynthesis
Polysacc_synt_C PF14667 Family 334 27373 138.10 22 27.61 Changed Polysaccharide biosynthesis C-terminal domain
Polysacc_syn_2C PF08485 Family 95 5422 48.00 78 14.06 Changed Polysaccharide biosynthesis protein C-terminal
Poly_export PF02563 Family 672 12959 86.30 34 22.19 Changed Polysaccharide biosynthesis/export protein
Pol_alpha_B_N PF08418 Family 85 469 204.80 22 34.98 Changed DNA polymerase alpha subunit B N-terminal
POM121 PF15229 Family 37 315 181.00 36 29.07 Changed POM121 family
Pombe_5TM PF09437 Family 2 8 120.00 34 85.26 Changed Pombe specific 5TM protein
Ponericin PF07442 Family 3 5 29.00 71 97.32 Changed Ponericin
POP1 PF06978 Family 81 839 119.90 24 20.51 Changed Ribonucleases P/MRP protein subunit POP1
Popeye PF04831 Family 38 454 187.40 37 56.38 Changed Popeye protein conserved region
POPLD PF08170 Domain 163 580 95.70 29 11.36 Changed POPLD (NUC188) domain
POR PF01558 Family 86 21977 176.30 25 24.08 Changed Pyruvate ferredoxin/flavodoxin oxidoreductase
PorB PF11565 Family 3 35 103.50 43 79.02 Changed Alpha helical Porin B
Porin_1 PF00267 Domain 11 23675 310.80 54 92.68 Changed Gram-negative porin
Porin_10 PF14121 Family 99 538 610.70 33 91.01 Changed Putative porin
Porin_2 PF02530 Family 16 2174 311.30 31 85.37 Changed Porin subfamily
Porin_3 PF01459 Family 74 2322 250.60 21 86.42 Changed Eukaryotic porin
Porin_4 PF13609 Domain 112 10093 324.60 19 90.31 Changed Gram-negative porin
Porin_5 PF16930 Family 23 568 386.50 37 85.89 New Putative porin
Porin_6 PF16939 Family 3 256 281.80 61 79.77 New Putative porin
Porin_7 PF16956 Family 6 452 218.40 30 90.45 New Putative general bacterial porin
Porin_8 PF16966 Family 11 2340 353.60 75 79.52 New Porin-like glycoporin RafY
Porin_OmpG PF09381 Family 1 1755 297.00 94 99.85 Changed Outer membrane protein G (OmpG)
Porin_OmpG_1_2 PF16946 Family 7 182 245.40 47 72.51 New Putative OMPG-porin 1 family
Porin_OmpL1 PF11389 Family 1 255 253.30 82 85.72 Changed Leptospira porin protein OmpL1
Porin_O_P PF07396 Family 22 3485 284.70 16 72.52 Changed Phosphate-selective porin O and P
Porphobil_deam PF01379 Domain 809 16927 208.60 51 66.64 Changed Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC PF03900 Domain 16 16276 73.00 41 23.24 Changed Porphobilinogen deaminase, C-terminal domain
Porph_ging PF09697 Family 29 849 46.30 47 17.37 Changed Protein of unknown function (Porph_ging)
PORR PF11955 Family 116 707 286.80 30 73.03 Changed Plant organelle RNA recognition domain
POR_N PF01855 Family 31 20069 228.90 32 30.34 Changed Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
Post_transc_reg PF13797 Family 27 918 82.40 38 85.62 Changed Post-transcriptional regulator
POT1 PF02765 Domain 48 717 134.20 19 17.77 Changed Telomeric single stranded DNA binding POT1/CDC13
POT1PC PF16686 Domain 91 370 148.10 24 23.86 New ssDNA-binding domain of telomere protection protein
Potassium_chann PF11404 Family 2 90 27.30 74 4.39 Changed Potassium voltage-gated channel
Potass_KdpF PF09604 Family 91 4246 24.70 54 62.73 Changed F subunit of K+-transporting ATPase (Potass_KdpF)
potato_inhibit PF00280 Domain 172 778 61.80 41 70.31 Changed Potato inhibitor I family
Potex_coat PF06184 Family 2 47 148.40 87 83.66 Changed Potexvirus coat protein
POTRA PF07244 Family 249 44161 79.50 21 30.41 Changed Surface antigen variable number repeat
POTRA_1 PF08478 Family 87 17069 69.90 28 21.24 Changed POTRA domain, FtsQ-type
POTRA_2 PF08479 Family 51 7219 75.10 26 14.12 Changed POTRA domain, ShlB-type
Potyvirid-P3 PF13608 Family 3 1411 376.80 33 15.77 Changed Protein P3 of Potyviral polyprotein
Poty_coat PF00767 Family 4 8803 211.50 55 31.93 Changed Potyvirus coat protein
Poty_PP PF08440 Family 5 1282 265.50 44 9.51 Changed Potyviridae polyprotein
Pou PF00157 Domain 40 1761 67.50 60 17.70 Changed Pou domain - N-terminal to homeobox domain
POX PF07526 Domain 131 642 128.90 36 22.87 Changed Associated with HOX
Poxvirus PF06227 Family 37 552 157.80 20 92.05 Changed dsDNA Poxvirus
Poxvirus_B22R PF04395 Family 12 140 178.20 42 11.25 Changed Poxvirus B22R protein
Poxvirus_B22R_C PF13168 Family 14 125 194.20 56 10.37 Changed Poxvirus B22R protein C-terminal
Poxvirus_B22R_N PF13169 Family 12 122 88.30 45 4.89 Changed Poxvirus B22R protein N-terminal
Pox_A11 PF05061 Family 7 90 256.90 53 99.06 Changed Poxvirus A11 Protein
Pox_A12 PF04651 Family 3 99 158.90 55 94.46 Changed Poxvirus A12 protein
Pox_A14 PF05767 Family 7 54 90.50 59 98.95 Changed Poxvirus virion envelope protein A14
Pox_A21 PF05323 Family 10 70 112.70 57 97.66 Changed Poxvirus A21 Protein
Pox_A22 PF04848 Family 9 144 154.00 37 76.48 Changed Poxvirus A22 protein
Pox_A28 PF04584 Family 10 80 136.40 57 99.35 Changed Poxvirus A28 family
Pox_A30L_A26L PF06086 Family 2 126 210.10 69 43.14 Changed Orthopoxvirus A26L/A30L protein
Pox_A31 PF05771 Family 4 69 111.10 76 82.09 Changed Poxvirus A31 protein
Pox_A32 PF04665 Domain 8 1054 194.20 37 77.18 Changed Poxvirus A32 protein
Pox_A3L PF05288 Family 9 102 67.30 66 94.94 Changed Poxvirus A3L Protein
Pox_A51 PF04948 Family 4 91 288.80 57 98.57 Changed Poxvirus A51 protein
Pox_A6 PF04924 Family 9 78 359.00 64 98.01 Changed Poxvirus A6 protein
Pox_A8 PF04745 Family 8 63 284.40 65 97.08 Changed VITF-3 subunit protein
Pox_A9 PF04835 Family 8 82 53.00 75 53.43 Changed A9 protein conserved region
Pox_Ag35 PF03286 Family 8 88 202.10 54 100.25 Changed Pox virus Ag35 surface protein
Pox_ATPase-GT PF10640 Domain 10 96 313.90 63 37.13 Changed mRNA capping enzyme N-terminal, ATPase and guanylyltransferase
Pox_A_type_inc PF04508 Repeat 11 793 22.70 47 18.30 Changed Viral A-type inclusion protein repeat
Pox_C4_C10 PF03336 Family 5 151 262.60 53 97.06 Changed Poxvirus C4/C10 protein
Pox_C7_F8A PF03287 Family 10 102 147.80 45 88.60 Changed Poxvirus C7/F8A protein
Pox_D2 PF04701 Family 8 61 134.10 51 89.87 Changed Pox virus D2 protein
Pox_D3 PF04580 Family 7 79 228.40 59 95.84 Changed Chordopoxvirinae D3 protein
Pox_D5 PF03288 Domain 41 4918 91.70 27 14.16 Changed Poxvirus D5 protein-like
Pox_E10 PF04805 Family 9 68 69.70 69 71.56 Changed E10-like protein conserved region
Pox_E2-like PF04497 Family 14 285 476.80 25 95.56 Changed Poxviridae protein
Pox_E6 PF04656 Family 9 85 554.20 71 99.99 Changed Pox virus E6 protein
Pox_E8 PF03394 Family 8 72 236.90 76 85.92 Changed Poxvirus E8 protein
Pox_EPC_I2-L1 PF12575 Family 7 59 71.00 54 97.71 Changed Poxvirus entry protein complex L1 and I2
Pox_F11 PF04943 Family 3 71 311.70 52 83.53 Changed Poxvirus F11 protein
Pox_F12L PF03337 Family 8 109 615.00 60 98.87 Changed Poxvirus F12L protein
Pox_F15 PF04596 Family 8 55 136.20 67 88.09 Changed Poxvirus protein F15
Pox_F16 PF04708 Family 6 76 216.80 61 94.62 Changed Poxvirus F16 protein
Pox_F17 PF04767 Family 9 59 93.30 64 92.38 Changed DNA-binding 11 kDa phosphoprotein
Pox_G5 PF04599 Family 8 109 390.40 50 96.51 Changed Poxvirus G5 protein
Pox_G7 PF05503 Family 8 76 349.30 61 97.84 Changed Poxvirus G7-like
Pox_G9-A16 PF03003 Family 30 257 126.50 29 42.78 Changed Pox virus entry-fusion-complex G9/A16
Pox_H7 PF04787 Family 9 75 140.70 57 98.05 Changed Late protein H7
Pox_I1 PF03289 Family 9 70 303.20 72 97.91 Changed Poxvirus protein I1
Pox_I3 PF04661 Family 8 89 260.50 56 94.78 Changed Poxvirus I3 ssDNA-binding protein
Pox_I5 PF04713 Family 8 57 74.90 49 94.68 Changed Poxvirus protein I5
Pox_I6 PF04595 Family 13 129 310.10 42 87.41 Changed Poxvirus I6-like family
Pox_int_trans PF05718 Family 9 65 369.80 62 98.14 Changed Poxvirus intermediate transcription factor
Pox_J1 PF03338 Family 9 74 143.70 62 94.96 Changed Poxvirus J1 protein
Pox_L3_FP4 PF03339 Family 6 85 307.10 57 88.29 Changed Poxvirus L3/FP4 protein
Pox_L5 PF04872 Family 8 74 77.10 55 61.58 Changed Poxvirus L5 protein family
Pox_LP_H2 PF03356 Family 10 133 179.70 63 96.75 Changed Viral late protein H2
Pox_M2 PF04887 Family 3 61 194.90 77 88.96 Changed Poxvirus M2 protein
Pox_MCEL PF03291 Family 10 1135 277.00 25 61.03 Changed mRNA capping enzyme
Pox_mRNA-cap PF03341 Family 7 64 278.10 69 98.77 Changed Poxvirus mRNA capping enzyme, small subunit
Pox_P21 PF05313 Family 8 67 188.90 57 95.27 Changed Poxvirus P21 membrane protein
Pox_P35 PF03213 Family 7 196 287.20 44 99.76 Changed Poxvirus P35 protein
Pox_P4A PF03395 Family 3 112 833.10 67 97.68 Changed Poxvirus P4A protein
Pox_P4B PF03292 Family 7 505 258.80 59 97.51 Changed Poxvirus P4B major core protein
Pox_polyA_pol PF03296 Domain 7 79 149.60 70 30.88 Changed Poxvirus poly(A) polymerase nucleotidyltransferase domain
Pox_polyA_pol_C PF12629 Domain 10 81 201.20 60 42.41 Changed Poxvirus poly(A) polymerase C-terminal domain
Pox_polyA_pol_N PF12630 Domain 9 76 106.40 67 22.73 Changed Poxvirus poly(A) polymerase N-terminal domain
Pox_Rap94 PF03294 Family 9 136 588.60 62 99.98 Changed RNA polymerase-associated transcription specificity factor, Rap94
Pox_Rif PF03340 Family 8 87 523.40 69 98.61 Changed Poxvirus rifampicin resistance protein
Pox_RNA_pol PF03293 Family 9 61 160.00 73 97.10 Changed Poxvirus DNA-directed RNA polymerase, 18 kD subunit
Pox_RNA_Pol_19 PF05320 Family 9 56 165.70 64 95.89 Changed Poxvirus DNA-directed RNA polymerase 19 kDa subunit
Pox_RNA_Pol_22 PF05273 Family 8 57 181.20 70 98.91 Changed Poxvirus RNA polymerase 22 kDa subunit
Pox_RNA_pol_35 PF03396 Family 9 89 277.50 64 95.53 Changed Poxvirus DNA-directed RNA polymerase, 35 kD subunit
Pox_ser-thr_kin PF05445 Family 8 87 423.90 63 96.18 Changed Poxvirus serine/threonine protein kinase
Pox_T4_C PF04490 Family 3 44 141.70 46 63.60 Changed Poxvirus T4 protein, C terminus
Pox_T4_N PF04491 Family 3 54 46.60 60 23.91 Changed Poxvirus T4 protein, N terminus
Pox_TAA1 PF03295 Family 8 61 63.00 71 41.96 Changed Poxvirus trans-activator protein A1 C-terminal
Pox_TAP PF03355 Family 5 77 236.30 77 99.84 Changed Viral Trans-Activator Protein
Pox_VERT_large PF04441 Family 9 89 698.10 69 97.78 Changed Poxvirus early transcription factor (VETF), large subunit
Pox_vIL-18BP PF05566 Family 2 61 124.10 86 98.40 Changed Orthopoxvirus interleukin 18 binding protein
Pox_VLTF3 PF04947 Family 14 221 163.60 31 53.97 Changed Poxvirus Late Transcription Factor VLTF3 like
Pox_VP8_L4R PF04498 Family 7 64 215.30 66 86.02 Changed Poxvirus nucleic acid binding protein VP8/L4R
PP-binding PF00550 Domain 161 181816 66.50 23 7.43 Changed Phosphopantetheine attachment site
PP-binding_2 PF14573 Domain 2 31 88.30 48 26.81 Changed Acyl-carrier
PP1 PF07430 Family 3 10 158.90 39 91.06 Changed Phloem filament protein PP1
PP1c_bdg PF10488 Domain 7 261 138.20 33 35.41 Changed Phosphatase-1 catalytic subunit binding region
PP1_bind PF15276 Family 16 148 59.90 49 4.11 Changed Protein phosphatase 1 binding
PP1_inhibitor PF05361 Family 7 358 107.20 37 79.67 Changed PKC-activated protein phosphatase-1 inhibitor
PP2 PF14299 Family 242 1106 152.30 26 62.35 Changed Phloem protein 2
PP28 PF10252 Domain 96 470 84.40 49 38.86 Changed Casein kinase substrate phosphoprotein PP28
PP2C PF00481 Family 28 12480 218.70 21 47.60 Changed Protein phosphatase 2C
PP2C_2 PF13672 Family 38 18451 219.80 24 69.88 Changed Protein phosphatase 2C
PP2C_C PF07830 Domain 47 402 75.50 47 19.44 Changed Protein serine/threonine phosphatase 2C, C-terminal domain
PPAK PF02818 Motif 39 449 26.80 64 1.00 Changed PPAK motif
PPARgamma_N PF12577 Family 11 155 82.60 64 18.23 Changed PPAR gamma N-terminal region
PPC PF04151 Domain 93 5390 69.50 30 13.96 Changed Bacterial pre-peptidase C-terminal domain
PPDFL PF15060 Family 23 152 98.40 49 90.01 Changed Differentiation and proliferation regulator
PPDK_N PF01326 Family 115 21958 230.70 26 41.24 Changed Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PPE PF00823 Family 116 102566 152.60 48 26.38 Changed PPE family
PPI_Ypi1 PF07491 Family 100 640 61.00 41 39.22 Changed Protein phosphatase inhibitor
PPK2 PF03976 Domain 10 10733 225.20 39 82.13 Changed Polyphosphate kinase 2 (PPK2)
PPO1_DWL PF12142 Domain 49 525 50.50 50 9.81 Changed Polyphenol oxidase middle domain
PPO1_KFDV PF12143 Domain 32 507 120.90 40 23.44 Changed Protein of unknown function (DUF_B2219)
PPP1R26_N PF15740 Family 20 99 498.20 35 76.05 New Protein phosphatase 1 regulatory subunit 26 N-terminus
PPP1R32 PF15691 Family 15 90 308.80 41 93.29 New Protein phosphatase 1 regulatory subunit 32
PPP1R35_C PF15503 Family 18 102 130.70 29 54.39 Changed Protein phosphatase 1 regulatory subunit 35 C-terminus
PPP4R2 PF09184 Family 29 528 265.20 18 65.40 Changed PPP4R2
PPP5 PF08321 Family 141 889 89.70 30 16.64 Changed PPP5 TPR repeat region
PPPI_inhib PF14895 Family 22 134 293.90 31 76.19 Changed Protein phosphatase 1 inhibitor
PPR PF01535 Family 487 64551 29.20 21 15.21 Changed PPR repeat
PPR_1 PF12854 Repeat 399 6992 33.00 30 7.28 Changed PPR repeat
PPR_2 PF13041 Repeat 415 79201 49.10 25 30.03 Changed PPR repeat family
PPR_3 PF13812 Repeat 130 11121 33.00 19 6.71 Changed Pentatricopeptide repeat domain
PPTA PF01239 Repeat 865 5078 27.40 29 22.23 Changed Protein prenyltransferase alpha subunit repeat
Pput2613-deam PF14427 Family 4 11 117.20 37 6.11 Changed Pput_2613-like deaminase
PPV_E1_C PF00519 Family 11 1557 263.70 46 68.69 Changed Papillomavirus helicase
PPV_E1_N PF00524 Family 7 764 124.90 37 22.38 Changed E1 Protein, N terminal domain
PPV_E2_C PF00511 Domain 15 826 75.10 42 21.92 Changed E2 (early) protein, C terminal
PPV_E2_N PF00508 Family 13 710 195.70 45 51.46 Changed E2 (early) protein, N terminal
Ppx-GppA PF02541 Family 10 19500 282.50 33 64.63 Changed Ppx/GppA phosphatase family
PP_kinase PF02503 Domain 691 12873 201.80 35 29.80 Changed Polyphosphate kinase middle domain
PP_kinase_C PF13090 Domain 563 12936 329.50 51 48.81 Changed Polyphosphate kinase C-terminal domain
PP_kinase_N PF13089 Domain 671 12070 105.10 46 15.04 Changed Polyphosphate kinase N-terminal domain
PP_M1 PF03012 Family 5 1177 233.30 78 99.72 Changed Phosphoprotein
PQ-loop PF04193 Repeat 228 7326 59.40 21 35.74 Changed PQ loop repeat
PqiA PF04403 Family 320 18550 154.60 34 72.69 Changed Paraquat-inducible protein A
PQQ PF01011 Repeat 71 17257 36.70 28 9.49 Changed PQQ enzyme repeat
PqqA PF08042 Family 39 981 19.00 70 56.26 Changed PqqA family
PqqD PF05402 Family 465 4348 67.60 25 50.08 Changed Coenzyme PQQ synthesis protein D (PqqD)
PQQ_2 PF13360 Domain 110 31427 192.00 17 47.96 Changed PQQ-like domain
PQQ_3 PF13570 Repeat 788 4088 44.10 37 11.84 Changed PQQ-like domain
PRA-CH PF01502 Family 697 16564 74.00 56 37.73 Changed Phosphoribosyl-AMP cyclohydrolase
PRA-PH PF01503 Family 43 18942 90.00 34 44.26 Changed Phosphoribosyl-ATP pyrophosphohydrolase
PRA1 PF03208 Family 184 1415 138.00 23 64.35 Changed PRA1 family protein
PRAI PF00697 Domain 18 15144 192.90 36 67.45 Changed N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PRANC PF09372 Domain 34 546 93.30 25 16.70 Changed PRANC domain
PRAP PF15314 Family 24 47 44.80 50 30.61 Changed Proline-rich acidic protein 1, pregnancy-specific uterine
PRAS PF15798 Family 10 124 115.90 40 34.73 New Proline-rich AKT1 substrate 1
PRC PF05239 Domain 114 24162 76.10 28 45.23 Changed PRC-barrel domain
PrcB_C PF14343 Family 165 451 58.00 28 29.91 Changed PrcB C-terminal
PRCC PF10253 Family 81 487 239.20 18 59.97 Changed Mitotic checkpoint regulator, MAD2B-interacting
PRCH PF03967 Family 26 120 133.60 45 51.83 Changed Photosynthetic reaction centre, H-chain N-terminal region
PRD PF00874 Domain 171 98217 91.00 20 26.65 Changed PRD domain
Prd1-P2 PF09214 Domain 1 7 555.70 90 93.92 Changed Bacteriophage Prd1, adsorption protein P2
PRD1_DD PF11087 Family 2 14 54.00 75 88.52 Changed PRD1 phage membrane DNA delivery
PRD_Mga PF08270 Family 6 2083 207.90 22 43.41 Changed M protein trans-acting positive regulator (MGA) PRD domain
Pre-SET PF05033 Family 386 1784 109.40 27 15.30 Changed Pre-SET motif
Prefoldin PF02996 Family 35 2342 117.20 20 51.87 Changed Prefoldin subunit
Prefoldin_2 PF01920 Family 54 2940 102.40 19 75.10 Changed Prefoldin subunit
Prefoldin_3 PF13758 Domain 21 155 97.00 40 16.00 Changed Prefoldin subunit
PRELI PF04707 Family 15 1602 145.80 27 51.35 Changed PRELI-like family
Prenylcys_lyase PF07156 Family 38 567 329.80 29 69.65 Changed Prenylcysteine lyase
Prenyltrans PF00432 Repeat 65 11692 39.00 24 23.68 Changed Prenyltransferase and squalene oxidase repeat
Prenyltransf PF01255 Family 1426 24984 206.60 44 84.27 Changed Putative undecaprenyl diphosphate synthase
PRESAN PF09687 Domain 153 1248 118.50 17 31.44 Changed Plasmodium RESA N-terminal
Presenilin PF01080 Family 67 827 267.20 31 81.60 Changed Presenilin
Preseq_ALAS PF09029 Domain 13 213 104.70 33 18.08 Changed 5-aminolevulinate synthase presequence
PRE_C2HC PF07530 Domain 10 239 64.60 30 11.97 Changed Associated with zinc fingers
PRF PF06875 Family 2 287 201.20 55 92.99 Changed Plethodontid receptivity factor PRF
PrgH PF09480 Family 13 2111 314.40 55 95.75 Changed Type III secretion system protein PrgH-EprH (PrgH)
PrgI PF12666 Family 106 1723 90.70 25 66.72 Changed PrgI family protein
PrgU PF09627 Domain 1 372 92.20 89 91.34 Changed PrgU-like protein
PRiA4_ORF3 PF07929 Family 120 1953 156.00 22 63.79 Changed Plasmid pRiA4b ORF-3-like protein
Pribosyltran PF00156 Domain 33 125306 145.10 17 57.07 Changed Phosphoribosyl transferase domain
Pribosyltran_N PF13793 Domain 347 24141 117.20 53 36.05 Changed N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth PF14572 Domain 9 22659 128.20 46 39.51 Changed Phosphoribosyl synthetase-associated domain
PriC PF07445 Family 53 3769 166.90 62 95.26 Changed Primosomal replication protein priC
PriCT_1 PF08708 Domain 24 3632 68.40 25 18.16 Changed Primase C terminal 1 (PriCT-1)
PriCT_2 PF08707 Domain 66 955 75.30 23 10.79 Changed Primase C terminal 2 (PriCT-2)
Prim-Pol PF09250 Domain 115 2255 165.50 20 39.05 Changed Bifunctional DNA primase/polymerase, N-terminal
PRIMA1 PF16101 Family 8 72 100.40 58 66.71 New Proline-rich membrane anchor 1
Prim_Zn_Ribbon PF08273 Domain 13 3091 37.20 66 5.89 Changed Zinc-binding domain of primase-helicase
Prion PF00377 Domain 15 882 109.60 68 49.76 Changed Prion/Doppel alpha-helical domain
Prion_bPrPp PF11587 Family 7 578 27.90 84 11.40 Changed Major prion protein bPrPp - N terminal
Prion_octapep PF03991 Repeat 5 127 7.80 94 27.84 Changed Copper binding octapeptide repeat
Prismane PF03063 Family 175 7350 484.00 44 96.34 Changed Prismane/CO dehydrogenase family
PRK PF00485 Domain 10 29723 178.10 30 64.99 Changed Phosphoribulokinase / Uridine kinase family
PrkA PF06798 Family 74 5382 253.00 71 39.75 Changed PrkA serine protein kinase C-terminal domain
PRKCSH PF07915 Family 102 999 84.30 26 19.89 Changed Glucosidase II beta subunit-like protein
PRKCSH-like PF12999 Family 5 864 144.40 32 33.39 Changed Glucosidase II beta subunit-like
PRKCSH_1 PF13015 Family 5 752 148.40 26 29.04 Changed Glucosidase II beta subunit-like protein
PRKG1_interact PF15898 Family 47 401 92.50 53 12.46 New cGMP-dependent protein kinase interacting domain
PrlF_antitoxin PF15937 Family 10 1979 83.20 73 87.94 New prlF antitoxin for toxin YhaV_toxin
PrmA PF06325 Family 30 19044 263.30 35 87.10 Changed Ribosomal protein L11 methyltransferase (PrmA)
PRMT5 PF05185 Family 30 1260 370.70 25 62.64 Changed PRMT5 arginine-N-methyltransferase
pRN1_helical PF13010 Domain 2 9 125.30 48 15.16 Changed Primase helical domain
PRNT PF15174 Family 2 15 48.90 70 73.33 Changed Prion-related protein testis-specific
Pro-kuma_activ PF09286 Domain 88 2052 137.40 21 21.45 Changed Pro-kumamolisin, activation domain
Pro-MCH PF05824 Family 5 106 70.80 55 47.82 Changed Pro-melanin-concentrating hormone (Pro-MCH)
Pro-NT_NN PF07421 Family 11 67 152.00 65 97.28 Changed Neurotensin/neuromedin N precursor
Pro-rich PF15240 Family 15 204 105.40 38 85.67 Changed Proline-rich
Pro-rich_19 PF15455 Family 10 42 313.50 63 71.90 Changed Proline-rich 19
PRO8NT PF08082 Domain 50 741 141.00 70 7.12 Changed PRO8NT (NUC069), PrP8 N-terminal domain
PROCN PF08083 Domain 16 727 365.40 72 17.53 Changed PROCN (NUC071) domain
PROCT PF08084 Domain 104 695 111.10 52 5.43 Changed PROCT (NUC072) domain
Profilin PF00235 Domain 260 1710 120.50 31 87.28 Changed Profilin
Prog_receptor PF02161 Family 9 122 348.40 54 62.23 Changed Progesterone receptor
Proho_convert PF12177 Domain 9 70 38.90 76 5.26 Changed Prohormone convertase enzyme
Prok-E2_A PF14457 Family 9 151 142.60 28 20.67 Changed Prokaryotic E2 family A
Prok-E2_B PF14461 Family 9 341 127.70 23 22.86 Changed Prokaryotic E2 family B
Prok-E2_C PF14459 Family 2 27 127.20 71 25.89 Changed Prokaryotic E2 family C
Prok-E2_D PF14460 Family 21 321 166.40 25 72.03 Changed Prokaryotic E2 family D
Prok-E2_E PF14462 Family 14 99 120.60 34 45.88 Changed Prokaryotic E2 family E
Prok-JAB PF14464 Family 72 8325 110.20 30 53.59 Changed Prokaryotic homologs of the JAB domain
Prok-RING_1 PF14446 Family 28 75 52.00 39 14.12 Changed Prokaryotic RING finger family 1
Prok-RING_2 PF14445 Family 3 8 47.10 33 13.58 Changed Prokaryotic RING finger family 2
Prok-RING_4 PF14447 Family 10 71 54.60 38 7.21 Changed Prokaryotic RING finger family 4
Prok-TraM PF09228 Domain 14 80 97.90 32 42.75 Changed Prokaryotic Transcriptional repressor TraM
Prokineticin PF06607 Family 7 250 92.60 36 68.94 Changed Prokineticin
Prok_Ub PF14454 Family 29 201 65.50 41 83.46 Changed Prokaryotic Ubiquitin
PROL5-SMR PF15621 Family 10 57 95.80 43 65.98 Changed Proline-rich submaxillary gland androgen-regulated family
Prolactin_RP PF15172 Family 8 65 44.20 56 40.45 Changed Prolactin-releasing peptide
Prolamin_like PF05617 Domain 94 716 68.20 23 52.88 Changed Prolamin-like
Promethin PF16015 Family 78 292 105.80 24 51.81 New Promethin
Prominin PF05478 Family 32 665 514.90 20 84.20 Changed Prominin
PRONE PF03759 Family 61 592 301.60 51 66.90 Changed PRONE (Plant-specific Rop nucleotide exchanger)
Propeptide_C1 PF08127 Motif 84 638 40.50 36 12.61 Changed Peptidase family C1 propeptide
Propeptide_C25 PF08126 Family 4 148 176.20 21 21.30 Changed Propeptide_C25
Propep_M14 PF02244 Domain 404 1478 71.60 22 16.54 Changed Carboxypeptidase activation peptide
Prophage_tail PF06605 Family 25 9825 360.70 28 57.84 Changed Prophage endopeptidase tail
ProQ PF04352 Domain 67 7755 116.70 45 58.56 Changed ProQ/FINO family
PRORP PF16953 Domain 18 443 200.80 26 38.98 New Protein-only RNase P
ProRS-C_1 PF09180 Domain 483 2958 72.70 35 13.12 Changed Prolyl-tRNA synthetase, C-terminal
ProRS-C_2 PF09181 Domain 4 17 64.80 58 14.09 Changed Prolyl-tRNA synthetase, C-terminal
ProSAAS PF07259 Family 3 32 160.30 78 70.34 Changed ProSAAS precursor
Prosystemin PF07376 Family 2 14 166.50 81 100.91 Changed Prosystemin
Protamine_3 PF08188 Family 2 2 48.00 98 100.00 Changed Spermatozal protamine family
Protamine_P1 PF00260 Family 7 155 47.00 73 96.31 Changed Protamine P1
Protamine_P2 PF00841 Family 7 64 90.30 64 83.09 Changed Sperm histone P2
Proteasome PF00227 Domain 157 31546 174.90 25 80.30 Changed Proteasome subunit
Proteasome_A_N PF10584 Domain 123 5216 22.90 62 8.97 Changed Proteasome subunit A N-terminal signature
Proteasom_PSMB PF10508 Family 8 418 364.60 19 81.07 Changed Proteasome non-ATPase 26S subunit
Proteasom_Rpn13 PF04683 Family 154 677 85.50 39 26.02 Changed Proteasome complex subunit Rpn13 ubiquitin receptor
Protein_K PF12283 Family 1 221 55.70 92 100.00 Changed Bacteriophage protein K
Prothymosin PF03247 Family 22 239 92.10 57 62.56 Changed Prothymosin/parathymosin family
Protocadherin PF08374 Family 17 412 201.80 46 20.84 Changed Protocadherin
Protoglobin PF11563 Family 83 3155 152.30 29 35.03 Changed Protoglobin
Proton_antipo_C PF01010 Family 77 19135 223.40 57 42.55 Changed NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
Proton_antipo_M PF00361 Family 14 182124 257.40 25 56.63 Changed Proton-conducting membrane transporter
Proton_antipo_N PF00662 Family 491 48146 57.50 34 8.88 Changed NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Prot_ATP_ID_OB PF16450 Domain 78 2293 143.10 75 24.16 New Proteasomal ATPase OB/ID domain
Prot_inhib_II PF02428 Domain 26 553 49.10 58 68.23 Changed Potato type II proteinase inhibitor family
Pro_3_hydrox_C PF05373 Domain 4 25 98.00 31 34.50 Changed L-proline 3-hydroxylase, C-terminal
Pro_Al_protease PF02983 Domain 100 564 58.30 29 15.14 Changed Alpha-lytic protease prodomain
Pro_CA PF00484 Domain 294 22863 148.90 29 54.90 Changed Carbonic anhydrase
Pro_dh PF01619 Family 241 15574 289.90 40 38.65 Changed Proline dehydrogenase
Pro_dh-DNA_bdg PF14850 Domain 112 6256 112.80 70 9.16 Changed DNA-binding domain of Proline dehydrogenase
Pro_isomerase PF00160 Domain 76 41137 162.40 37 67.33 Changed Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Pro_racemase PF05544 Family 14 4355 310.60 37 95.82 Changed Proline racemase
Prp18 PF02840 Family 103 662 135.60 43 39.30 Changed Prp18 domain
Prp19 PF08606 Domain 90 650 66.80 57 13.56 Changed Prp19/Pso4-like
PRP1_N PF06424 Domain 128 631 141.00 43 16.47 Changed PRP1 splicing factor, N-terminal
PRP21_like_P PF12230 Family 132 644 230.50 29 37.88 Changed Pre-mRNA splicing factor PRP21 like protein
PRP3 PF08572 Domain 135 665 216.80 38 38.37 Changed pre-mRNA processing factor 3 (PRP3)
Prp31_C PF09785 Family 105 621 128.20 43 25.35 Changed Prp31 C terminal domain
PRP38 PF03371 Family 167 1030 162.60 34 50.16 Changed PRP38 family
PRP38_assoc PF12871 Domain 56 287 92.60 29 22.25 Changed Pre-mRNA-splicing factor 38-associated hydrophilic C-term
PRP4 PF08799 Domain 185 1106 28.80 52 6.59 Changed pre-mRNA processing factor 4 (PRP4) like
PRP8_domainIV PF12134 Domain 18 673 219.50 76 10.03 Changed PRP8 domain IV core
PRP9_N PF16958 Domain 17 65 135.00 35 28.48 New Pre-mRNA-splicing factor PRP9 N-terminus
PrpF PF04303 Family 6 5422 349.20 50 97.23 Changed PrpF protein
PrpR_N PF06506 Domain 99 5289 163.60 40 28.96 Changed Propionate catabolism activator
PRR18 PF15671 Family 4 38 147.80 37 81.72 New Proline-rich protein family 18
PRR20 PF15708 Family 5 27 186.10 50 99.03 New Proline-rich protein family 20
PRR22 PF15776 Family 10 39 262.30 57 83.17 New Proline-rich protein family 22
PRRSV_2b PF07069 Family 2 102 72.60 86 100.00 Changed Porcine reproductive and respiratory syndrome virus 2b
PRRSV_Env PF02340 Family 4 360 231.40 77 92.37 Changed PRRSV putative envelope protein
PrsW-protease PF13367 Family 77 7074 192.00 49 51.69 Changed Protease prsW family
PRTase_1 PF11202 Family 67 1502 242.30 56 63.12 Changed Phosphoribosyl transferase (PRTase)
PRTase_2 PF15609 Family 70 1474 191.60 50 46.65 Changed Phosphoribosyl transferase
PRTase_3 PF15610 Family 12 86 242.30 36 77.06 Changed PRTase ComF-like
PRTP PF01366 Family 12 244 587.20 35 83.26 Changed Herpesvirus processing and transport protein
PRT_C PF08372 Family 25 871 140.10 41 18.27 Changed Plant phosphoribosyltransferase C-terminal
PRY PF13765 Family 150 5151 48.80 37 9.58 Changed SPRY-associated domain
Pr_beta_C PF12465 Family 109 629 35.50 38 13.03 Changed Proteasome beta subunits C terminal
PS-DH PF14765 Domain 79 28241 279.10 27 13.40 Changed Polyketide synthase dehydratase
PsaA_PsaB PF00223 Family 18 5248 522.40 56 96.69 Changed Photosystem I psaA/psaB protein
PsaD PF02531 Family 29 310 127.90 67 82.27 Changed PsaD
PsaL PF02605 Family 55 325 144.40 49 73.08 Changed Photosystem I reaction centre subunit XI
PsaM PF07465 Family 23 357 28.40 49 89.74 Changed Photosystem I protein M (PsaM)
PsaN PF05479 Family 8 122 109.90 38 72.15 Changed Photosystem I reaction centre subunit N (PSAN or PSI-N)
PsaX PF08078 Family 10 38 34.80 59 73.47 Changed PsaX family
Psb28 PF03912 Family 75 349 103.60 45 81.02 Changed Psb28 protein
PsbH PF00737 Family 13 1771 40.90 77 68.02 Changed Photosystem II 10 kDa phosphoprotein
PsbI PF02532 Family 18 1125 35.60 87 96.16 Changed Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
PsbJ PF01788 Family 28 1917 32.30 80 96.43 Changed PsbJ
PsbK PF02533 Family 18 1240 39.90 79 70.78 Changed Photosystem II 4 kDa reaction centre component
PsbL PF02419 Family 7 1456 36.70 90 94.79 Changed PsbL protein
PsbM PF05151 Family 15 1747 27.40 81 84.23 Changed Photosystem II reaction centre M protein (PsbM)
PsbN PF02468 Family 44 2528 42.90 81 96.16 Changed Photosystem II reaction centre N protein (psbN)
PsbP PF01789 Family 85 1077 165.50 20 66.20 Changed PsbP
PsbQ PF05757 Family 20 313 156.20 28 80.49 Changed Oxygen evolving enhancer protein 3 (PsbQ)
PsbR PF04725 Family 7 159 88.70 65 69.97 Changed Photosystem II 10 kDa polypeptide PsbR
PsbT PF01405 Family 15 2537 27.80 90 82.91 Changed Photosystem II reaction centre T protein
PsbU PF06514 Family 11 158 92.00 48 64.38 Changed Photosystem II 12 kDa extrinsic protein (PsbU)
PsbW PF07123 Family 18 121 118.60 49 92.41 Changed Photosystem II reaction centre W protein (PsbW)
PsbX PF06596 Family 39 282 38.30 50 50.35 Changed Photosystem II reaction centre X protein (PsbX)
PsbY PF06298 Family 49 342 34.00 46 49.05 Changed Photosystem II protein Y (PsbY)
PSCyt1 PF07635 Family 64 1308 56.30 29 7.47 Changed Planctomycete cytochrome C
PSCyt2 PF07583 Family 235 956 201.40 34 22.46 Changed Protein of unknown function (DUF1549)
PSCyt3 PF07627 Family 115 451 98.40 38 12.24 Changed Protein of unknown function (DUF1588)
PSD1 PF07587 Family 205 972 245.20 32 27.81 Changed Protein of unknown function (DUF1553)
PSD2 PF07624 Family 86 417 73.30 24 9.42 Changed Protein of unknown function (DUF1585)
PSD3 PF07626 Family 77 370 65.10 32 8.02 Changed Protein of unknown function (DUF1587)
PSD4 PF07631 Family 113 439 127.20 32 15.82 Changed Protein of unknown function (DUF1592)
PSD5 PF07637 Family 97 393 61.60 30 7.60 Changed Protein of unknown function (DUF1595)
PSDC PF12588 Family 98 426 133.20 35 31.03 Changed Phophatidylserine decarboxylase
PseudoU_synth_1 PF01416 Domain 117 44379 102.30 22 72.31 Changed tRNA pseudouridine synthase
PseudoU_synth_2 PF00849 Family 57 107503 145.70 25 51.37 Changed RNA pseudouridylate synthase
PSGP PF07276 Repeat 3 74 13.00 96 81.03 Changed Apopolysialoglycoprotein (PSGP)
PSI PF01437 Family 95 3239 54.20 26 5.85 Changed Plexin repeat
PsiA PF06952 Family 7 2527 213.20 63 97.23 Changed PsiA protein
PsiB PF06290 Family 6 2332 128.40 72 94.07 Changed Plasmid SOS inhibition protein (PsiB)
PsiE PF06146 Family 276 7527 65.70 40 47.20 Changed Phosphate-starvation-inducible E
PsiF_repeat PF07769 Repeat 77 7849 33.80 71 64.18 Changed psiF repeat
PSII PF00421 Family 17 5339 393.10 48 96.09 Changed Photosystem II protein
PSII_BNR PF14870 Domain 18 2098 139.20 26 52.57 Changed Photosynthesis system II assembly factor YCF48
PSII_Pbs27 PF13326 Family 22 272 134.90 29 84.03 Changed Photosystem II Pbs27
PSII_Ycf12 PF05969 Family 11 381 31.10 53 80.20 Changed Photosystem II complex subunit Ycf12
PSI_8 PF00796 Family 26 1072 24.20 73 64.72 Changed Photosystem I reaction centre subunit VIII
PSI_PsaE PF02427 Domain 28 307 61.20 62 66.41 Changed Photosystem I reaction centre subunit IV / PsaE
PSI_PsaF PF02507 Family 11 295 135.50 49 76.74 Changed Photosystem I reaction centre subunit III
PSI_PsaH PF03244 Family 8 109 126.90 67 95.27 Changed Photosystem I reaction centre subunit VI
PSI_PsaJ PF01701 Family 34 1122 36.80 74 83.60 Changed Photosystem I reaction centre subunit IX / PsaJ
PSI_PSAK PF01241 Family 28 382 73.50 36 70.05 Changed Photosystem I psaG / psaK
PSK PF06404 Family 40 258 75.50 33 82.00 Changed Phytosulfokine precursor protein (PSK)
PSK_trans_fac PF07704 Domain 63 8364 80.80 48 98.33 Changed Rv0623-like transcription factor
Psm4 PF17063 Family 1 22 20.00 100 100.00 New Phenol-soluble modulin alpha 4 peptide
PSP PF04046 Family 108 923 47.60 51 8.15 Changed PSP
PSP1 PF04468 Family 514 8231 85.80 58 27.64 Changed PSP1 C-terminal conserved region
PSP94 PF05825 Domain 4 170 86.60 31 72.79 Changed Beta-microseminoprotein (PSP-94)
PspA_IM30 PF04012 Family 11 11443 223.10 32 94.79 Changed PspA/IM30 family
PspB PF06667 Family 50 3731 72.00 77 96.49 Changed Phage shock protein B
PspC PF04024 Domain 745 10366 58.70 37 40.25 Changed PspC domain
PSRP-3_Ycf65 PF04839 Family 17 261 47.70 62 36.23 Changed Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
PSRT PF07636 Motif 4 7 30.60 59 19.12 Changed PSRT
PSS PF03034 Family 82 586 244.40 40 61.04 Changed Phosphatidyl serine synthase
Psu PF07455 Family 4 1812 168.00 46 91.32 Changed Phage polarity suppression protein (Psu)
PSY3 PF16836 Domain 14 54 205.50 39 90.40 New Shu complex component Psy3, DNA-binding description
PS_Dcarbxylase PF02666 Family 112 13266 203.40 33 65.31 Changed Phosphatidylserine decarboxylase
PS_pyruv_trans PF04230 Family 162 7614 290.00 21 71.91 Changed Polysaccharide pyruvyl transferase
PT PF04886 Repeat 14 391 37.70 42 7.38 Changed PT repeat
PT-HINT PF07591 Family 3 1678 115.40 33 13.61 Changed Pretoxin HINT domain
PT-TG PF14449 Family 37 644 80.20 27 17.32 Changed Pre-toxin TG
PT-VENN PF04829 Family 42 3039 49.10 42 3.76 Changed Pre-toxin domain with VENN motif
PTAC PF06130 Domain 373 6691 73.90 38 69.81 Changed Phosphate propanoyltransferase
ptaRNA1_toxin PF12703 Family 4 77 71.50 66 91.43 Changed Toxin of toxin-antitoxin type 1 system
PTase_Orf2 PF11468 Family 5 46 267.80 29 93.16 Changed Aromatic prenyltransferase Orf2
PTA_PTB PF01515 Family 19 30776 295.30 36 59.72 Changed Phosphate acetyl/butaryl transferase
PTB PF08416 Family 14 903 126.90 29 14.31 Changed Phosphotyrosine-binding domain
PTCB-BRCT PF12738 Family 44 3173 63.40 23 10.56 Changed twin BRCT domain
PTCRA PF15028 Domain 7 34 124.40 72 50.07 Changed Pre-T-cell antigen receptor
PTE PF02126 Domain 3 6186 304.20 41 96.12 Changed Phosphotriesterase family
PTEN_C2 PF10409 Family 50 1375 138.70 24 15.29 Changed C2 domain of PTEN tumour-suppressor protein
Pterin_4a PF01329 Domain 586 9308 89.70 36 77.82 Changed Pterin 4 alpha carbinolamine dehydratase
Pterin_bind PF00809 Domain 30 34202 235.50 31 43.19 Changed Pterin binding enzyme
PTH2 PF01981 Family 332 1965 108.40 31 60.98 Changed Peptidyl-tRNA hydrolase PTH2
PTN13_u3 PF16599 Family 19 90 180.20 52 8.29 New Unstructured linker region on PTN13 protein between PDZ
PTN_MK_C PF01091 Domain 23 331 59.30 43 42.09 Changed PTN/MK heparin-binding protein family, C-terminal domain
PTN_MK_N PF05196 Domain 17 182 58.70 61 37.83 Changed PTN/MK heparin-binding protein family, N-terminal domain
PTP2 PF17022 Family 11 43 179.90 37 76.23 New Polar tube protein 2 from Microsporidia
PTPA PF03095 Family 283 1117 274.50 39 76.84 Changed Phosphotyrosyl phosphate activator (PTPA) protein
PTPLA PF04387 Family 249 1206 150.40 32 60.47 Changed Protein tyrosine phosphatase-like protein, PTPLA
PTPlike_phytase PF14566 Domain 51 944 146.10 25 37.95 Changed Inositol hexakisphosphate
PTPRCAP PF15713 Family 17 40 146.10 56 65.19 New Protein tyrosine phosphatase receptor type C-associated
PTPS PF01242 Domain 103 15289 123.40 38 88.00 Changed 6-pyruvoyl tetrahydropterin synthase
PTPS_related PF10131 Family 9 599 354.70 37 61.97 Changed 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
PTP_N PF12453 Family 5 60 25.60 75 3.22 Changed Protein tyrosine phosphatase N terminal
PTR PF12789 Repeat 16 3890 46.00 44 15.86 Changed Phage tail repeat like
PTR2 PF00854 Family 21 31086 335.70 26 73.95 Changed POT family
PTRF_SDPR PF15237 Family 33 331 198.40 40 66.49 Changed PTRF/SDPR family
PTS-HPr PF00381 Domain 1143 35448 81.70 34 29.90 Changed PTS HPr component phosphorylation site
PTSIIA_gutA PF03829 Family 105 6003 112.90 46 92.94 Changed PTS system glucitol/sorbitol-specific IIA component
PTSIIB_sorb PF03830 Family 387 24170 147.20 35 73.84 Changed PTS system sorbose subfamily IIB component
PTS_2-RNA PF01885 Family 256 3943 147.50 48 82.31 Changed RNA 2'-phosphotransferase, Tpt1 / KptA family
PTS_EIIA_1 PF00358 Domain 827 43733 126.50 46 26.32 Changed phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PTS_EIIA_2 PF00359 Family 104 107603 141.80 22 33.42 Changed Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PTS_EIIB PF00367 Domain 1024 82300 33.60 46 6.28 Changed phosphotransferase system, EIIB
PTS_EIIC PF02378 Family 55 148454 301.20 19 56.73 Changed Phosphotransferase system, EIIC
PTS_EIIC_2 PF13303 Family 45 21278 319.80 36 92.42 Changed Phosphotransferase system, EIIC
PTS_IIA PF02255 Domain 298 18947 93.50 43 87.61 Changed PTS system, Lactose/Cellobiose specific IIA subunit
PTS_IIB PF02302 Domain 237 104828 88.70 21 27.07 Changed PTS system, Lactose/Cellobiose specific IIB subunit
PUA PF01472 Family 93 13962 74.50 34 20.37 Changed PUA domain
PUA_2 PF14306 Domain 66 2286 153.10 32 31.99 Changed PUA-like domain
PUB PF09409 Domain 101 1301 81.90 21 15.16 Changed PUB domain
PUCC PF03209 Family 9 470 377.40 30 82.18 Changed PUCC protein
PucR PF07905 Family 209 4799 120.30 25 24.19 Changed Purine catabolism regulatory protein-like family
PUD PF03714 Domain 147 4015 100.40 24 13.90 Changed Bacterial pullanase-associated domain
PUF PF00806 Repeat 50 13246 33.60 25 20.10 Changed Pumilio-family RNA binding repeat
PUFD PF16553 Domain 16 186 113.40 61 8.26 New BCORL-PCGF1-binding domain
PufQ PF05398 Family 6 39 74.10 43 83.57 Changed PufQ cytochrome subunit
PUL PF08324 Domain 192 842 257.20 19 37.13 Changed PUL domain
PulG PF11773 Family 11 925 79.40 48 87.48 Changed Type II secretory pathway pseudopilin
PUMA PF15826 Family 4 30 148.00 68 91.41 New Bcl-2-binding component 3, p53 upregulated modulator of apoptosis
PUNUT PF16913 Family 16 730 257.70 32 80.13 New Purine nucleobase transmembrane transport
Pup PF05639 Family 24 2243 64.30 76 98.84 Changed Pup-like protein
Pup_ligase PF03136 Family 131 4584 435.90 59 88.99 Changed Pup-ligase protein
PurA PF04845 Family 5 489 170.90 39 73.09 Changed PurA ssDNA and RNA-binding protein
PurL_C PF16904 Domain 3 11 90.70 59 15.13 New Phosphoribosylformylglycinamidine synthase II C-terminus
PurS PF02700 Family 358 9654 75.70 49 80.24 Changed Phosphoribosylformylglycinamidine (FGAM) synthase
Pur_ac_phosph_N PF16656 Domain 266 4541 96.70 29 17.63 New Purple acid Phosphatase, N-terminal domain
Pur_DNA_glyco PF02245 Domain 405 10385 181.80 46 88.91 Changed Methylpurine-DNA glycosylase (MPG)
PuR_N PF09182 Domain 91 7105 69.50 68 25.34 Changed Bacterial purine repressor, N-terminal
putAbiC PF16872 Family 95 396 83.30 29 23.51 New Putative phage abortive infection protein
Put_DNA-bind_N PF06971 Family 238 8979 48.80 59 22.83 Changed Putative DNA-binding protein N-terminus
Put_Phosphatase PF06888 Family 9 874 201.30 25 79.57 Changed Putative Phosphatase
PV-1 PF06637 Family 10 93 336.20 42 83.36 Changed PV-1 protein (PLVAP)
PvlArgDC PF01862 Family 101 560 156.30 31 91.42 Changed Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
PVL_ORF50 PF07768 Family 3 9554 114.10 56 92.67 Changed PVL ORF-50-like family
PV_NSP1 PF12433 Family 2 317 64.10 55 16.68 Changed Parvovirus non-structural protein 1
PWI PF01480 Family 127 1777 70.20 26 10.68 Changed PWI domain
PWWP PF00855 Domain 239 4164 94.00 22 12.36 Changed PWWP domain
PX PF00787 Domain 67 13807 115.00 21 20.12 Changed PX domain
PXA PF02194 Family 323 1479 171.50 22 19.28 Changed PXA domain
PXB PF12828 Domain 86 389 134.90 38 14.72 Changed PX-associated
PXPV PF12778 Repeat 7 259 22.20 65 22.95 Changed PXPV repeat (3 copies)
PXT1 PF15214 Family 7 21 48.50 67 36.18 Changed Peroxisomal testis-specific protein 1
PYC_OADA PF02436 Family 452 15232 191.90 38 21.56 Changed Conserved carboxylase domain
PYNP_C PF07831 Domain 46 13907 74.10 40 17.12 Changed Pyrimidine nucleoside phosphorylase C-terminal domain
PyocinActivator PF11112 Family 21 1284 73.20 40 78.70 Changed Pyocin activator protein PrtN
Pyocin_S PF06958 Family 39 1775 137.20 33 25.30 Changed S-type Pyocin
PyrBI_leader PF08052 Family 2 1024 35.40 90 95.56 Changed PyrBI operon leader peptide
PyrI PF01948 Domain 239 5005 91.80 65 59.00 Changed Aspartate carbamoyltransferase regulatory chain, allosteric domain
Pyridoxal_deC PF00282 Family 9 21776 290.00 26 68.81 Changed Pyridoxal-dependent decarboxylase conserved domain
Pyridox_oxase_2 PF12766 Family 51 593 102.90 30 42.17 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_oxidase PF01243 Domain 124 39406 89.10 21 50.66 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_ox_2 PF12900 Family 151 8457 125.60 28 80.54 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_oxidase_2 PF13883 Domain 32 1501 155.40 28 61.25 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_ox_like PF16242 Domain 23 1814 138.60 24 84.91 New Pyridoxamine 5'-phosphate oxidase like
PYRIN PF02758 Domain 247 972 78.60 27 11.41 Changed PAAD/DAPIN/Pyrin domain
PyrI_C PF02748 Domain 157 5097 48.50 59 30.52 Changed Aspartate carbamoyltransferase regulatory chain, metal binding domain
Pyrophosphatase PF00719 Domain 640 13165 155.30 47 81.80 Changed Inorganic pyrophosphatase
Pyr_excise PF03013 Domain 26 1619 113.70 39 88.92 Changed Pyrimidine dimer DNA glycosylase
Pyr_redox PF00070 Domain 95 717 75.90 23 16.70 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 Domain 135 264575 292.80 19 62.28 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 Family 37 30366 200.00 29 41.68 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 Domain 86 80476 109.50 28 23.47 Changed Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PYST-C1 PF09690 Domain 16 76 59.40 39 42.13 Changed Plasmodium yoelii subtelomeric region (PYST-C1)
PY_rept_46 PF09689 Domain 8 43 44.00 57 70.76 Changed Plasmodium yoelii repeat (PY_rept_46)
P_C PF06640 Family 4 53 152.20 38 64.27 Changed P protein C-terminus
P_gingi_FimA PF06321 Family 32 1010 300.30 15 55.63 Changed Major fimbrial subunit protein (FimA)
P_proprotein PF01483 Family 45 2904 87.60 29 11.40 Changed Proprotein convertase P-domain
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z