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Browse Pfam families

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ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
WD40 PF00400 Repeat 1465 268378 39.50 25 19.62 Changed WD domain, G-beta repeat
ABC_tran PF00005 Domain 55 228719 148.40 26 36.05 Changed ABC transporter
Pkinase PF00069 Domain 38 179123 239.30 21 38.97 Changed Protein kinase domain
MFS_1 PF07690 Family 192 136262 311.80 12 76.47 Changed Major Facilitator Superfamily
Ank_2 PF12796 Repeat 204 135706 87.90 23 30.73 Changed Ankyrin repeats (3 copies)
LRR_8 PF13855 Repeat 63 107406 59.20 28 20.04 Changed Leucine rich repeat
Response_reg PF00072 Domain 52 106648 112.00 25 28.24 Changed Response regulator receiver domain
RRM_1 PF00076 Domain 72 99972 67.40 23 23.15 Changed RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PPR_2 PF13041 Repeat 249 90391 49.20 26 27.18 Changed PPR repeat family
zf-C2H2 PF00096 Domain 159 85153 23.10 49 13.32 Changed Zinc finger, C2H2 type
HATPase_c PF02518 Domain 658 83835 117.50 24 17.84 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BPD_transp_1 PF00528 Family 81 82736 196.90 14 65.26 Changed Binding-protein-dependent transport system inner membrane component
Helicase_C PF00271 Family 422 81936 117.30 20 13.16 Changed Helicase conserved C-terminal domain
PPR PF01535 Family 459 78016 29.20 21 14.92 Changed PPR repeat
Mito_carr PF00153 Family 161 67652 94.30 20 72.92 Changed Mitochondrial carrier protein
fn3 PF00041 Domain 98 65361 84.90 20 22.81 Changed Fibronectin type III domain
p450 PF00067 Domain 50 62234 345.10 17 79.68 Changed Cytochrome P450
I-set PF07679 Domain 48 60821 88.90 21 24.85 Changed Immunoglobulin I-set domain
AMP-binding PF00501 Family 145 57035 378.60 18 50.03 Changed AMP-binding enzyme
AAA PF00004 Domain 207 56215 130.10 26 21.67 Changed ATPase family associated with various cellular activities (AAA)
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