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Browse Pfam families

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ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
WD40 PF00400 Repeat 1465 378719 39.40 25 19.92 Changed WD domain, G-beta repeat
ABC_tran PF00005 Domain 55 369723 148.30 26 37.59 Changed ABC transporter
zf-C2H2 PF00096 Domain 159 340711 23.20 40 20.25 Changed Zinc finger, C2H2 type
Pkinase PF00069 Domain 38 236455 238.10 21 38.74 Changed Protein kinase domain
MFS_1 PF07690 Family 192 214283 309.00 13 77.30 Changed Major Facilitator Superfamily
Response_reg PF00072 Domain 52 176760 111.90 25 29.15 Changed Response regulator receiver domain
Ank_2 PF12796 Repeat 203 172686 87.80 23 30.24 Changed Ankyrin repeats (3 copies)
BPD_transp_1 PF00528 Family 81 148125 196.70 15 65.40 Changed Binding-protein-dependent transport system inner membrane component
HATPase_c PF02518 Domain 658 133923 117.00 25 18.04 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LRR_8 PF13855 Repeat 63 133230 59.10 28 20.43 Changed Leucine rich repeat
RRM_1 PF00076 Domain 72 131391 67.40 22 22.89 Changed RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Helicase_C PF00271 Family 422 119885 116.90 20 13.28 Changed Helicase conserved C-terminal domain
PPR_2 PF13041 Repeat 226 98670 49.20 26 26.56 Changed PPR repeat family
Mito_carr PF00153 Family 161 89340 94.20 21 72.26 Changed Mitochondrial carrier protein
fn3 PF00041 Domain 98 88510 84.90 20 22.31 Changed Fibronectin type III domain
AMP-binding PF00501 Family 145 87704 377.70 19 51.35 Changed AMP-binding enzyme
I-set PF07679 Domain 48 87027 88.80 22 25.60 Changed Immunoglobulin I-set domain
adh_short PF00106 Domain 44 86592 180.90 22 60.56 Changed short chain dehydrogenase
PPR PF01535 Family 459 85615 29.20 22 14.60 Changed PPR repeat
HisKA PF00512 Domain 265 85578 68.10 24 10.11 Changed His Kinase A (phospho-acceptor) domain
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