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Browse Pfam families

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ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
ABC_tran PF00005 Domain 55 681506 148.80 26 38.88 Changed ABC transporter
WD40 PF00400 Repeat 1465 540137 39.40 24 19.56 Changed WD domain, G-beta repeat
zf-C2H2 PF00096 Domain 159 473178 23.20 40 18.81 Changed Zinc finger, C2H2 type
MFS_1 PF07690 Family 192 375867 307.70 13 78.13 Changed Major Facilitator Superfamily
Pkinase PF00069 Domain 38 349448 241.50 21 38.16 Changed Protein kinase domain
Response_reg PF00072 Domain 52 342025 112.30 25 29.92 Changed Response regulator receiver domain
BPD_transp_1 PF00528 Family 81 294965 197.20 15 65.38 Changed Binding-protein-dependent transport system inner membrane component
HATPase_c PF02518 Domain 658 257789 116.50 25 18.01 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Ank_2 PF12796 Repeat 199 255525 88.20 23 29.73 Changed Ankyrin repeats (3 copies)
LRR_8 PF13855 Repeat 63 200166 59.20 28 20.20 Changed Leucine rich repeat
RRM_1 PF00076 Domain 72 192165 67.40 22 22.58 Changed RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Helicase_C PF00271 Family 421 191324 116.80 20 13.30 Changed Helicase conserved C-terminal domain
HisKA PF00512 Domain 265 166591 68.20 24 10.20 Changed His Kinase A (phospho-acceptor) domain
AMP-binding PF00501 Family 145 157533 384.80 20 51.83 Changed AMP-binding enzyme
TetR_N PF00440 Domain 75 155637 46.40 27 22.35 Changed Bacterial regulatory proteins, tetR family
adh_short PF00106 Domain 44 152101 182.60 23 62.26 Changed short chain dehydrogenase
PPR_2 PF13041 Repeat 215 151677 49.20 26 26.40 Changed PPR repeat family
CBS PF00571 Domain 840 150008 57.70 20 25.86 Changed CBS domain
adh_short_C2 PF13561 Domain 358 148335 230.10 26 86.15 Changed Enoyl-(Acyl carrier protein) reductase
HTH_1 PF00126 Domain 1330 140802 59.80 33 20.00 Changed Bacterial regulatory helix-turn-helix protein, lysR family
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