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Browse Pfam families

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ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
ABC_tran PF00005 Domain 55 1466247 147.90 26 43.55 Changed ABC transporter
MFS_1 PF07690 Family 194 838004 293.90 14 84.84 Changed Major Facilitator Superfamily
BPD_transp_1 PF00528 Family 81 658914 194.80 15 65.36 Changed Binding-protein-dependent transport system inner membrane component
Response_reg PF00072 Domain 52 547587 111.50 26 33.24 Changed Response regulator receiver domain
HATPase_c PF02518 Domain 659 485514 114.10 24 19.50 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
adh_short PF00106 Domain 45 406662 189.80 25 70.52 Changed short chain dehydrogenase
HTH_1 PF00126 Domain 1346 401538 59.80 32 20.01 Changed Bacterial regulatory helix-turn-helix protein, lysR family
COX1 PF00115 Family 742 399321 233.50 56 93.05 Changed Cytochrome C and Quinol oxidase polypeptide I
LysR_substrate PF03466 Family 365 398865 202.80 15 67.95 Changed LysR substrate binding domain
Pentapeptide_2 PF01469 Repeat 55 339481 39.90 48 38.70 Changed Pentapeptide repeats (8 copies)
TetR_N PF00440 Domain 94 328784 46.50 26 22.64 Changed Bacterial regulatory proteins, tetR family
Helicase_C PF00271 Family 423 299814 116.60 20 14.07 Changed Helicase conserved C-terminal domain
CBS PF00571 Domain 846 286447 58.10 19 26.46 Changed CBS domain
HisKA PF00512 Domain 265 285270 67.20 25 11.09 Changed His Kinase A (phospho-acceptor) domain
AMP-binding PF00501 Family 145 284906 388.30 20 54.74 Changed AMP-binding enzyme
Radical_SAM PF04055 Domain 518 270437 169.60 14 45.19 Changed Radical SAM superfamily
HTH_18 PF12833 Domain 327 267537 79.50 25 23.46 Changed Helix-turn-helix domain
Pyr_redox_2 PF07992 Domain 135 264575 292.80 19 62.28 Changed Pyridine nucleotide-disulphide oxidoreductase
WD40 PF00400 Repeat 1465 255261 39.50 24 19.58 Changed WD domain, G-beta repeat
Hexapep PF00132 Repeat 216 254578 36.20 24 24.60 Changed Bacterial transferase hexapeptide (six repeats)
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