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Browse Pfam families

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ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
WD40 PF00400 Repeat 1465 194775 39.60 24 19.67 Changed WD domain, G-beta repeat
ABC_tran PF00005 Domain 55 151019 148.60 26 35.74 Changed ABC transporter
Pkinase PF00069 Domain 38 125183 239.50 21 39.00 Changed Protein kinase domain
Ank_2 PF12796 Repeat 204 102519 87.30 23 31.10 Changed Ankyrin repeats (3 copies)
MFS_1 PF07690 Family 192 89153 311.20 12 76.83 Changed Major Facilitator Superfamily
zf-C2H2 PF00096 Domain 159 85271 23.10 48 14.00 Changed Zinc finger, C2H2 type
LRR_8 PF13855 Repeat 64 81798 59.10 28 21.66 Changed Leucine rich repeat
RRM_1 PF00076 Domain 72 72376 67.40 22 23.15 Changed RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Response_reg PF00072 Domain 52 68630 112.20 25 27.70 Changed Response regulator receiver domain
fn3 PF00041 Domain 98 57455 84.90 20 23.48 Changed Fibronectin type III domain
Helicase_C PF00271 Family 423 56017 117.60 20 13.06 Changed Helicase conserved C-terminal domain
HATPase_c PF02518 Domain 658 55059 117.80 24 17.65 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PPR_2 PF13041 Repeat 249 54016 49.20 26 27.03 Changed PPR repeat family
BPD_transp_1 PF00528 Family 81 53466 197.20 15 65.37 Changed Binding-protein-dependent transport system inner membrane component
I-set PF07679 Domain 48 52825 88.80 22 24.86 Changed Immunoglobulin I-set domain
PPR PF01535 Family 459 49054 29.20 21 15.45 Changed PPR repeat
Mito_carr PF00153 Family 161 47534 94.40 21 74.17 Changed Mitochondrial carrier protein
Cadherin PF00028 Family 55 47291 93.20 25 45.87 Changed Cadherin domain
p450 PF00067 Domain 50 41973 345.60 17 80.95 Changed Cytochrome P450
DEAD PF00270 Domain 181 38092 169.90 22 21.91 Changed DEAD/DEAH box helicase
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