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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
z-alpha PF02295 Domain 5 195 63.70 31 12.42 Changed Adenosine deaminase z-alpha domain
Z1 PF10593 Domain 68 130 229.10 27 27.54 Changed Z1 domain
ZapA PF05164 Family 445 1002 98.30 18 82.31 Changed Cell division protein ZapA
ZapC PF07126 Family 38 78 170.20 41 93.70 Changed Cell-division protein ZapC
Zds_C PF08632 Domain 11 191 51.50 62 5.46 Changed Activator of mitotic machinery Cdc14 phosphatase activation C-term
Zea_mays_MuDR PF05928 Family 4 1 115.00 100 34.53 Changed Zea mays MURB-like protein (MuDR)
Zein PF01559 Family 7 123 135.10 41 93.66 Changed Zein seed storage protein
Zein-binding PF04576 Family 80 476 89.60 44 15.71 Changed Zein-binding
Zeta_toxin PF06414 Domain 19 534 159.50 18 45.02 Changed Zeta toxin
zf-3CxxC PF13695 Domain 163 414 100.10 29 38.35 Changed Zinc-binding domain
zf-3CxxC_2 PF17180 Family 10 131 66.30 68 28.13 New Zinc-binding domain
zf-4CXXC_R1 PF10497 Domain 67 704 94.00 31 13.74 Changed Zinc-finger domain of monoamine-oxidase A repressor R1
zf-A20 PF01754 Family 144 1183 23.90 45 7.92 Changed A20-like zinc finger
zf-AD PF07776 Domain 94 2326 74.90 20 13.41 Changed Zinc-finger associated domain (zf-AD)
zf-AN1 PF01428 Family 476 2254 39.60 36 18.83 Changed AN1-like Zinc finger
zf-ANAPC11 PF12861 Family 5 394 79.00 45 49.22 Changed Anaphase-promoting complex subunit 11 RING-H2 finger
zf-BED PF02892 Domain 24 1720 47.20 25 10.24 Changed BED zinc finger
zf-B_box PF00643 Domain 99 8292 42.90 27 8.69 Changed B-box zinc finger
zf-C2H2 PF00096 Domain 159 85271 23.10 48 14.00 Changed Zinc finger, C2H2 type
zf-C2H2_10 PF16588 Domain 23 39 22.70 56 13.58 Changed C2H2 zinc-finger
zf-C2H2_11 PF16622 Disordered 14 253 28.90 58 2.76 Changed zinc-finger C2H2-type
zf-C2H2_2 PF12756 Family 104 1035 94.80 25 24.52 Changed C2H2 type zinc-finger (2 copies)
zf-C2H2_3 PF13878 Domain 140 444 39.30 38 8.21 Changed zinc-finger of acetyl-transferase ESCO
zf-C2H2_4 PF13894 Domain 323 16481 24.00 37 6.09 Changed C2H2-type zinc finger
zf-C2H2_6 PF13912 Domain 31 34522 26.00 37 9.13 Changed C2H2-type zinc finger
zf-C2H2_7 PF15269 Domain 2 99 54.00 86 8.34 Changed Zinc-finger
zf-C2H2_8 PF15909 Domain 3 58 93.30 63 22.03 Changed C2H2-type zinc ribbon
zf-C2H2_9 PF16293 Domain 9 9 60.00 44 19.98 Changed C2H2 type zinc-finger (1 copy)
zf-C2H2_aberr PF17017 Family 6 24 114.50 45 27.42 Changed Aberrant zinc-finger
zf-C2H2_assoc PF16606 Disordered 6 59 80.40 81 6.67 Changed Unstructured conserved, between two C2H2-type zinc-fingers
zf-C2H2_assoc2 PF16624 Disordered 8 57 94.10 69 14.76 Changed Unstructured region upstream of a zinc-finger
zf-C2H2_assoc3 PF16637 Disordered 10 60 70.50 70 11.69 Changed Putative zinc-finger between two C2H2 zinc-fingers on Patz
zf-C2H2_jaz PF12171 Family 125 2835 26.60 32 5.86 Changed Zinc-finger double-stranded RNA-binding
zf-C2HC PF01530 Family 87 1920 28.80 66 10.74 Changed Zinc finger, C2HC type
zf-C2HC5 PF06221 Domain 66 376 50.80 45 10.18 Changed Putative zinc finger motif, C2HC5-type
zf-C2HCIx2C PF10782 Family 17 33 57.30 38 60.77 Changed Zinc-finger
zf-C2HC_2 PF13913 Domain 100 1439 24.30 36 10.04 Changed zinc-finger of a C2HC-type
zf-C2HE PF16278 Domain 118 340 61.20 30 18.52 Changed C2HE / C2H2 / C2HC zinc-binding finger
zf-C3H1 PF10650 Domain 47 216 21.20 53 1.55 Changed Putative zinc-finger domain
zf-C3H2C3 PF17122 Domain 3 142 36.70 55 3.63 Changed Zinc-finger
zf-C3HC PF07967 Domain 24 397 128.50 27 22.42 Changed C3HC zinc finger-like
zf-C3Hc3H PF13891 Domain 100 521 62.70 33 15.67 Changed Potential DNA-binding domain
zf-C3HC4 PF00097 Domain 35 4499 44.70 31 7.35 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 Domain 10 4064 39.50 36 7.42 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_3 PF13920 Domain 399 8919 48.70 30 9.28 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 Domain 11 2510 41.90 43 8.85 Changed zinc finger of C3HC4-type, RING
zf-C3HC4_5 PF17121 Domain 7 291 49.70 54 14.69 Changed Zinc finger, C3HC4 type (RING finger)
zf-C4 PF00105 Domain 26 6215 68.00 46 14.46 Changed Zinc finger, C4 type (two domains)
zf-C4H2 PF10146 Family 30 176 207.20 40 89.70 Changed Zinc finger-containing protein
zf-C4pol PF14260 Domain 267 717 73.30 35 5.24 Changed C4-type zinc-finger of DNA polymerase delta
zf-C4_ClpX PF06689 Domain 392 1623 38.20 54 9.10 Changed ClpX C4-type zinc finger
zf-C4_Topoisom PF01396 Family 22 3627 38.40 32 11.35 Changed Topoisomerase DNA binding C4 zinc finger
zf-C5HC2 PF02928 Domain 233 824 53.90 34 4.02 Changed C5HC2 zinc finger
zf-C6H2 PF15801 Domain 122 468 46.70 45 10.96 Changed zf-MYND-like zinc finger, mRNA-binding
zf-CCCH PF00642 Family 71 10498 26.10 34 7.50 Changed Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_2 PF14608 Domain 83 2436 18.20 38 9.42 Changed RNA-binding, Nab2-type zinc finger
zf-CCCH_3 PF15663 Family 12 412 86.00 32 19.46 Changed Zinc-finger containing family
zf-CCHC PF00098 Domain 82 12424 17.80 43 5.75 Changed Zinc knuckle
zf-CCHC_2 PF13696 Domain 54 688 21.00 55 3.67 Changed Zinc knuckle
zf-CCHC_3 PF13917 Domain 21 486 38.70 34 16.46 Changed Zinc knuckle
zf-CCHC_4 PF14392 Domain 36 840 36.00 29 9.90 Changed Zinc knuckle
zf-CCHC_5 PF14787 Domain 5 47 32.60 47 5.66 Changed GAG-polyprotein viral zinc-finger
zf-CCHC_6 PF15288 Domain 22 338 36.80 42 3.27 Changed Zinc knuckle
zf-CCHH PF10283 Domain 88 343 24.50 50 6.72 Changed Zinc-finger (CX5CX6HX5H) motif
zf-CDGSH PF09360 Domain 217 1131 43.90 30 43.97 Changed Iron-binding zinc finger CDGSH type
zf-CGNR PF11706 Domain 264 598 43.20 41 22.57 Changed CGNR zinc finger
zf-CHC2 PF01807 Domain 18 1944 96.00 36 16.34 Changed CHC2 zinc finger
zf-CHCC PF10276 Domain 118 582 37.30 41 31.36 Changed Zinc-finger domain
zf-CHY PF05495 Domain 276 971 76.70 32 17.57 Changed CHY zinc finger
zf-CpG_bind_C PF12269 Domain 30 174 204.90 49 40.06 Changed CpG binding protein zinc finger C terminal domain
zf-CSL PF05207 Domain 58 717 58.60 38 39.92 Changed CSL zinc finger
zf-CW PF07496 Domain 211 1029 47.20 35 5.86 Changed CW-type Zinc Finger
zf-CXXC PF02008 Domain 31 1094 46.20 45 4.51 Changed CXXC zinc finger domain
zf-DBF PF07535 Domain 114 370 43.80 40 6.01 Changed DBF zinc finger
zf-DHHC PF01529 Family 74 5630 128.80 27 30.92 Changed DHHC palmitoyltransferase
zf-Di19 PF05605 Domain 48 932 57.50 32 13.35 Changed Drought induced 19 protein (Di19), zinc-binding
zf-DNA_Pol PF08996 Domain 147 398 180.20 29 13.30 Changed DNA Polymerase alpha zinc finger
zf-DNL PF05180 Domain 120 473 64.10 42 33.65 Changed DNL zinc finger
zf-Dof PF02701 Family 54 1153 58.10 67 18.80 Changed Dof domain, zinc finger
zf-dskA_traR PF01258 Family 149 1650 35.40 37 24.22 Changed Prokaryotic dksA/traR C4-type zinc finger
zf-FCS PF06467 Domain 41 1514 38.80 27 14.01 Changed MYM-type Zinc finger with FCS sequence motif
zf-FLZ PF04570 Family 65 792 50.80 41 27.72 Changed zinc-finger of the FCS-type, C2-C2
zf-FPG_IleRS PF06827 Domain 100 2053 29.40 33 5.76 Changed Zinc finger found in FPG and IleRS
zf-GRF PF06839 Domain 12 1508 45.40 34 9.86 Changed GRF zinc finger
zf-H2C2 PF09337 Domain 26 523 38.60 31 5.23 Changed His(2)-Cys(2) zinc finger
zf-H2C2_2 PF13465 Domain 119 1697 25.90 61 7.31 Changed Zinc-finger double domain
zf-H2C2_5 PF13909 Domain 26 4904 25.10 47 8.70 Changed C2H2-type zinc-finger domain
zf-H3C2 PF16721 Domain 1 2 102.00 70 5.88 Changed Zinc-finger like, probable DNA-binding
zf-HC2 PF13490 Domain 659 1360 33.30 28 13.55 Changed Putative zinc-finger
zf-HC3 PF16827 Domain 10 15 66.00 40 69.23 Changed zinc-finger
zf-HC5HC2H PF13771 Domain 101 1313 84.30 30 5.97 Changed PHD-like zinc-binding domain
zf-HC5HC2H_2 PF13832 Domain 32 2241 112.90 33 9.24 Changed PHD-zinc-finger like domain
ZF-HD_dimer PF04770 Family 65 524 53.70 58 23.28 Changed ZF-HD protein dimerisation region
zf-His_Me_endon PF05551 Domain 11 32 109.80 18 29.06 Changed Zinc-binding loop region of homing endonuclease
zf-HIT PF04438 Domain 92 1379 30.60 37 9.18 Changed HIT zinc finger
zf-HYPF PF07503 Domain 600 1011 33.90 45 8.75 Changed HypF finger
zf-IS66 PF13005 Domain 211 608 44.60 33 9.75 Changed zinc-finger binding domain of transposase IS66
zf-ISL3 PF14690 Domain 76 772 47.60 25 12.43 Changed zinc-finger of transposase IS204/IS1001/IS1096/IS1165
zf-like PF04071 Family 31 150 81.00 36 40.03 Changed Cysteine-rich small domain
zf-LITAF-like PF10601 Family 368 854 68.30 27 36.94 Changed LITAF-like zinc ribbon domain
zf-LSD1 PF06943 Domain 97 584 24.90 53 19.62 Changed LSD1 zinc finger
zf-LYAR PF08790 Domain 96 386 27.70 53 7.94 Changed LYAR-type C2HC zinc finger
zf-met PF12874 Domain 311 15130 23.40 28 5.66 Changed Zinc-finger of C2H2 type
zf-met2 PF12907 Family 10 218 36.80 46 36.54 Changed Zinc-binding
zf-MIZ PF02891 Domain 32 1236 50.20 44 7.11 Changed MIZ/SP-RING zinc finger
zf-Mss51 PF13824 Domain 79 195 64.90 47 12.29 Changed Zinc-finger of mitochondrial splicing suppressor 51
zf-MYND PF01753 Family 151 5176 41.60 36 7.82 Changed MYND finger
zf-NADH-PPase PF09297 Domain 55 854 31.60 31 9.60 Changed NADH pyrophosphatase zinc ribbon domain
zf-nanos PF05741 Family 84 273 54.90 55 25.60 Changed Nanos RNA binding domain
zf-NF-X1 PF01422 Family 127 3534 19.90 47 16.58 Changed NF-X1 type zinc finger
zf-NOSIP PF15906 Domain 2 272 72.30 52 22.74 Changed Zinc-finger of nitric oxide synthase-interacting protein
zf-NPL4 PF05020 Family 84 370 135.80 48 22.84 Changed NPL4 family, putative zinc binding region
zf-Nse PF11789 Domain 20 390 60.50 32 19.53 Changed Zinc-finger of the MIZ type in Nse subunit
zf-P11 PF03854 Family 3 3 50.00 52 52.82 Changed P-11 zinc finger
zf-Paramyx-P PF13008 Domain 7 7 45.00 37 14.36 Changed Zinc-binding domain of Paramyxoviridae V protein
zf-PARP PF00645 Domain 229 803 79.90 29 14.89 Changed Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PHD-like PF15446 Domain 52 108 165.80 43 10.29 Changed PHD/FYVE-zinc-finger like domain
zf-piccolo PF05715 Domain 37 263 58.60 64 2.92 Changed Piccolo Zn-finger
zf-primase PF09329 Domain 144 369 45.90 37 6.50 Changed Primase zinc finger
zf-RAG1 PF10426 Domain 7 43 30.00 69 2.90 Changed Recombination-activating protein 1 zinc-finger domain
zf-RanBP PF00641 Domain 24 4362 29.70 34 8.20 Changed Zn-finger in Ran binding protein and others
zf-rbx1 PF12678 Domain 71 1129 56.70 39 18.92 Changed RING-H2 zinc finger domain
zf-ribbon_3 PF13248 Domain 29 200 25.40 36 10.00 Changed zinc-ribbon domain
zf-RING-like PF08746 Domain 114 296 43.00 36 13.74 Changed RING-like domain
zf-RING_10 PF16685 Domain 17 104 67.90 63 12.51 Changed zinc RING finger of MSL2
zf-RING_11 PF17123 Domain 147 733 29.10 42 6.74 Changed RING-like zinc finger
zf-RING_2 PF13639 Domain 188 16915 45.10 36 10.14 Changed Ring finger domain
zf-RING_4 PF14570 Domain 52 688 48.10 49 5.66 Changed RING/Ubox like zinc-binding domain
zf-RING_5 PF14634 Domain 90 871 47.90 29 11.93 Changed zinc-RING finger domain
zf-RING_6 PF14835 Domain 1 70 62.10 58 9.25 Changed zf-RING of BARD1-type protein
zf-RING_7 PF02591 Domain 205 459 33.70 36 13.54 Changed C4-type zinc ribbon domain
zf-RING_9 PF13901 Domain 123 606 186.80 35 27.08 Changed Putative zinc-RING and/or ribbon
zf-RING_UBOX PF13445 Domain 616 5038 44.10 32 8.40 Changed RING-type zinc-finger
zf-RNPHF PF08080 Domain 4 171 34.40 75 8.40 Changed RNPHF zinc finger
zf-RRN7 PF11781 Domain 77 229 32.70 30 5.79 Changed Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
zf-RRPl_C4 PF17026 Family 11 11 109.30 30 46.55 Changed Putative ribonucleoprotein zinc-finger pf C4 type
zf-RVT PF13966 Domain 276 1337 76.70 24 19.04 Changed zinc-binding in reverse transcriptase
zf-SAP30 PF13866 Domain 15 152 65.80 65 32.77 Changed SAP30 zinc-finger
zf-SCNM1 PF15803 Family 20 77 27.00 66 11.03 Changed Zinc-finger of sodium channel modifier 1
zf-Sec23_Sec24 PF04810 Domain 356 1806 39.00 39 4.44 Changed Sec23/Sec24 zinc finger
zf-SNAP50_C PF12251 Family 78 283 183.10 31 46.01 Changed snRNA-activating protein of 50kDa MW C terminal
zf-TAZ PF02135 Family 210 1029 75.80 36 8.87 Changed TAZ zinc finger
zf-tcix PF14952 Domain 13 86 41.40 68 7.37 Changed Putative treble-clef, zinc-finger, Zn-binding
zf-TFIIB PF13453 Domain 72 355 40.80 37 36.80 Changed Transcription factor zinc-finger
zf-TFIIIC PF12660 Domain 20 226 96.10 22 13.25 Changed Putative zinc-finger of transcription factor IIIC complex
zf-Tim10_DDP PF02953 Domain 461 1819 62.80 26 62.08 Changed Tim10/DDP family zinc finger
zf-TRAF PF02176 Family 9 1762 56.00 27 18.17 Changed TRAF-type zinc finger
zf-TRAF_2 PF15965 Domain 33 205 90.30 55 13.51 Changed TRAF-like zinc-finger
zf-trcl PF13451 Domain 96 283 47.80 59 48.09 Changed Probable zinc-ribbon domain
zf-TRM13_CCCH PF11722 Domain 95 227 29.10 41 5.35 Changed CCCH zinc finger in TRM13 protein
zf-U1 PF06220 Domain 11 861 36.70 39 14.96 Changed U1 zinc finger
zf-U11-48K PF05253 Domain 231 777 24.80 37 10.49 Changed U11-48K-like CHHC zinc finger
zf-UBP PF02148 Domain 166 2724 68.00 31 10.95 Changed Zn-finger in ubiquitin-hydrolases and other protein
zf-UBR PF02207 Family 316 1353 69.00 32 4.50 Changed Putative zinc finger in N-recognin (UBR box)
zf-UDP PF14569 Domain 31 357 76.70 61 7.79 Changed Zinc-binding RING-finger
zf-XS PF03470 Domain 12 279 41.70 43 7.75 Changed XS zinc finger domain
zf-ZPR1 PF03367 Family 328 971 154.90 36 66.44 Changed ZPR1 zinc-finger domain
Zfx_Zfy_act PF04704 Family 14 191 259.50 50 41.17 Changed Zfx / Zfy transcription activation region
ZFYVE21_C PF16696 Domain 18 81 129.80 58 55.30 Changed Zinc finger FYVE domain-containing protein 21 C-terminus
Zf_RING PF16744 Domain 9 72 72.00 69 18.67 Changed KIAA1045 RING finger
zinc-ribbons_6 PF07191 Family 29 51 66.10 42 87.65 Changed zinc-ribbons
zinc-ribbon_6 PF10005 Domain 26 133 91.70 34 25.76 Changed zinc-ribbon domain
Zincin_1 PF06262 Family 115 436 92.10 29 65.10 Changed Zinicin-like metallopeptidase
zinc_ribbon_10 PF10058 Family 27 403 52.90 42 13.97 Changed Predicted integral membrane zinc-ribbon metal-binding protein
zinc_ribbon_11 PF11682 Family 2 7 118.60 33 91.41 Changed Probable zinc-ribbon
zinc_ribbon_12 PF11331 Family 48 211 44.50 42 5.73 Changed Probable zinc-ribbon domain
zinc_ribbon_13 PF09855 Family 42 92 62.60 43 86.93 Changed Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
zinc_ribbon_15 PF17032 Domain 53 185 78.60 23 67.68 Changed zinc-ribbon family
zinc_ribbon_16 PF17034 Family 3 308 111.10 33 11.52 Changed Zinc-ribbon like family
zinc_ribbon_2 PF13240 Domain 236 1236 22.90 40 7.57 Changed zinc-ribbon domain
zinc_ribbon_4 PF13717 Domain 59 205 35.90 33 9.19 Changed zinc-ribbon domain
zinc_ribbon_5 PF13719 Domain 3 103 36.90 51 8.72 Changed zinc-ribbon domain
zinc_ribbon_6 PF14599 Domain 132 551 58.10 45 11.34 Changed Zinc-ribbon
zinc_ribbon_9 PF14369 Domain 70 506 33.80 39 10.04 Changed zinc-ribbon
Zinicin_2 PF10103 Family 156 360 320.90 30 81.87 Changed Zinicin-like metallopeptidase
ZinT PF09223 Domain 51 117 177.60 42 47.74 Changed ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
Zip PF02535 Family 37 6015 234.80 16 74.11 Changed ZIP Zinc transporter
ZipA_C PF04354 Domain 113 274 122.60 29 35.91 Changed ZipA, C-terminal FtsZ-binding domain
ZirS_C PF16583 Family 1 1 145.00 100 52.54 Changed Zinc-regulated secreted antivirulence protein C-terminal domain
zn-ribbon_14 PF16503 Family 78 366 31.60 56 8.62 Changed Zinc-ribbon
Zn-ribbon_8 PF09723 Domain 582 837 40.60 36 43.59 Changed Zinc ribbon domain
ZnuA PF01297 Family 992 2147 275.50 22 84.98 Changed Zinc-uptake complex component A periplasmic
Zn_clus PF00172 Domain 29 19794 39.10 33 5.74 Changed Fungal Zn(2)-Cys(6) binuclear cluster domain
Zn_dep_PLPC PF00882 Domain 130 443 174.60 14 45.73 Changed Zinc dependent phospholipase C
Zn_peptidase PF04228 Family 7 595 265.10 34 87.02 Changed Putative neutral zinc metallopeptidase
Zn_peptidase_2 PF04298 Family 388 569 216.30 41 94.77 Changed Putative neutral zinc metallopeptidase
Zn_protease PF05618 Family 10 407 133.10 30 59.94 Changed Putative ATP-dependant zinc protease
Zn_ribbon_17 PF17120 Domain 9 334 56.00 37 5.14 Changed Zinc-ribbon, C4HC2 type
Zn_ribbon_2 PF12674 Domain 129 206 78.70 35 52.96 Changed Putative zinc ribbon domain
Zn_ribbon_recom PF13408 Domain 332 1495 61.50 22 11.95 Changed Recombinase zinc beta ribbon domain
Zn_Tnp_IS1 PF03811 Domain 3 302 34.10 56 33.33 Changed InsA N-terminal domain
Zn_Tnp_IS1595 PF12760 Domain 38 330 47.60 30 15.93 Changed Transposase zinc-ribbon domain
Zn_Tnp_IS91 PF14319 Family 92 255 102.60 30 28.99 Changed Transposase zinc-binding domain
Zona_pellucida PF00100 Family 441 2456 231.40 17 39.94 Changed Zona pellucida-like domain
ZoocinA_TRD PF16775 Domain 4 7 102.90 33 35.23 Changed Target recognition domain of lytic exoenzyme
Zot PF05707 Domain 7 111 168.20 16 45.73 Changed Zonular occludens toxin (Zot)
ZT_dimer PF16916 Domain 463 2406 77.90 22 22.58 Changed Dimerisation domain of Zinc Transporter
ZU5 PF00791 Family 96 1748 93.50 27 7.64 Changed ZU5 domain
Zw10 PF06248 Family 8 342 412.30 18 58.38 Changed Centromere/kinetochore Zw10
Zwint PF15556 Family 7 42 230.50 63 86.23 Changed ZW10 interactor
ZYG-11_interact PF05884 Family 8 49 240.70 23 90.19 Changed Interactor of ZYG-11
ZZ PF00569 Domain 7 3425 44.50 30 4.41 Changed Zinc finger, ZZ type
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z