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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
z-alpha PF02295 Domain 5 406 63.10 29 15.76 Changed Adenosine deaminase z-alpha domain
Z1 PF10593 Domain 68 537 230.00 30 27.26 Changed Z1 domain
ZapA PF05164 Family 452 14084 89.70 31 84.69 Changed Cell division protein ZapA
ZapC PF07126 Family 38 3625 168.70 78 94.12 Changed Cell-division protein ZapC
Zds_C PF08632 Domain 11 286 51.70 64 5.52 Changed Activator of mitotic machinery Cdc14 phosphatase activation C-term
Zea_mays_MuDR PF05928 Family 4 19 203.00 85 94.63 Changed Zea mays MURB-like protein (MuDR)
Zein PF01559 Family 7 330 149.30 44 94.34 Changed Zein seed storage protein
Zein-binding PF04576 Family 80 576 89.00 45 15.71 Changed Zein-binding
Zeta_toxin PF06414 Domain 19 5426 161.30 27 64.02 Changed Zeta toxin
zf-3CxxC PF13695 Domain 44 686 92.50 27 37.74 Changed Zinc-binding domain
zf-4CXXC_R1 PF10497 Domain 69 906 93.90 30 13.20 Changed Zinc-finger domain of monoamine-oxidase A repressor R1
zf-A20 PF01754 Family 145 1609 23.90 46 8.37 Changed A20-like zinc finger
zf-AD PF07776 Domain 94 3073 75.20 20 13.86 Changed Zinc-finger associated domain (zf-AD)
zf-AN1 PF01428 Family 478 3371 39.50 36 19.22 Changed AN1-like Zinc finger
zf-ANAPC11 PF12861 Family 5 507 80.70 47 46.52 Changed Anaphase-promoting complex subunit 11 RING-H2 finger
zf-BED PF02892 Domain 24 2456 46.90 25 10.14 Changed BED zinc finger
zf-B_box PF00643 Domain 100 11452 43.20 26 9.15 Changed B-box zinc finger
zf-C2H2 PF00096 Domain 159 99707 23.10 48 13.46 Changed Zinc finger, C2H2 type
zf-C2H2_10 PF16588 Domain 23 61 22.80 60 13.76 New C2H2 zinc-finger
zf-C2H2_11 PF16622 Disordered 14 304 28.90 58 2.81 New zinc-finger C2H2-type
zf-C2H2_2 PF12756 Family 105 1583 94.40 25 24.75 Changed C2H2 type zinc-finger (2 copies)
zf-C2H2_3 PF13878 Domain 140 623 39.30 36 8.38 Changed zinc-finger of acetyl-transferase ESCO
zf-C2H2_4 PF13894 Domain 484 7467 24.20 36 5.31 Changed C2H2-type zinc finger
zf-C2H2_6 PF13912 Domain 31 43099 26.00 36 9.60 Changed C2H2-type zinc finger
zf-C2H2_7 PF15269 Domain 2 109 54.00 85 8.32 Changed Zinc-finger
zf-C2H2_8 PF15909 Domain 3 69 94.10 69 24.31 New C2H2-type zinc ribbon
zf-C2H2_9 PF16293 Domain 9 26 60.00 59 19.90 New C2H2 type zinc-finger (1 copy)
zf-C2H2_aberr PF17017 Family 8 28 115.60 21 22.44 New Aberrant zinc-finger
zf-C2H2_assoc PF16606 Disordered 6 67 80.20 82 6.74 New Unstructured conserved, between two C2H2-type zinc-fingers
zf-C2H2_assoc2 PF16624 Disordered 8 72 95.40 71 14.91 New Unstructured region upstream of a zinc-finger
zf-C2H2_assoc3 PF16637 Disordered 10 83 69.80 73 11.74 New Putative zinc-finger between two C2H2 zinc-fingers on Patz
zf-C2H2_jaz PF12171 Family 127 4210 26.40 31 6.07 Changed Zinc-finger double-stranded RNA-binding
zf-C2HC PF01530 Family 88 2216 28.80 65 10.51 Changed Zinc finger, C2HC type
zf-C2HC5 PF06221 Domain 66 550 50.80 44 10.21 Changed Putative zinc finger motif, C2HC5-type
zf-C2HC_2 PF13913 Domain 101 2035 24.20 35 9.51 Changed zinc-finger of a C2HC-type
zf-C2HE PF16278 Domain 121 490 60.60 30 18.94 New C2HE / C2H2 / C2HC zinc-binding finger
zf-C3H1 PF10650 Domain 47 306 21.90 49 1.64 Changed Putative zinc-finger domain
zf-C3H2C3 PF17122 Domain 3 182 36.60 56 3.65 New Zinc-finger
zf-C3HC PF07967 Domain 24 553 129.30 26 23.30 Changed C3HC zinc finger-like
zf-C3Hc3H PF13891 Domain 100 643 62.50 31 15.86 Changed Potential DNA-binding domain
zf-C3HC4 PF00097 Domain 35 16918 41.20 40 7.37 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 Domain 341 999 43.60 30 8.44 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_3 PF13920 Domain 406 14362 48.90 29 9.04 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 Domain 11 3769 42.00 43 9.06 Changed zinc finger of C3HC4-type, RING
zf-C3HC4_5 PF17121 Domain 7 422 49.50 52 14.77 New Zinc finger, C3HC4 type (RING finger)
zf-C4 PF00105 Domain 26 9896 66.60 47 14.68 Changed Zinc finger, C4 type (two domains)
zf-C4H2 PF10146 Family 30 224 207.00 41 89.80 Changed Zinc finger-containing protein
zf-C4pol PF14260 Domain 271 1123 73.60 36 5.58 Changed C4-type zinc-finger of DNA polymerase delta
zf-C4_ClpX PF06689 Domain 400 18921 38.10 65 9.14 Changed ClpX C4-type zinc finger
zf-C4_Topoisom PF01396 Family 23 43120 39.60 36 12.22 Changed Topoisomerase DNA binding C4 zinc finger
zf-C5HC2 PF02928 Domain 237 1146 54.10 34 4.02 Changed C5HC2 zinc finger
zf-C6H2 PF15801 Domain 122 731 47.00 44 10.88 New zf-MYND-like zinc finger, mRNA-binding
zf-CCCH PF00642 Family 71 14851 25.90 34 7.71 Changed Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_2 PF14608 Domain 43 2114 18.60 38 9.95 Changed RNA-binding, Nab2-type zinc finger
zf-CCCH_3 PF15663 Family 12 505 86.90 34 19.26 New Zinc-finger containing family
zf-CCHC PF00098 Domain 82 69856 17.80 56 7.35 Changed Zinc knuckle
zf-CCHC_2 PF13696 Domain 55 976 20.90 55 3.67 Changed Zinc knuckle
zf-CCHC_3 PF13917 Domain 21 717 39.50 31 16.35 Changed Zinc knuckle
zf-CCHC_4 PF14392 Domain 36 1017 36.50 30 9.12 Changed Zinc knuckle
zf-CCHC_5 PF14787 Domain 5 125 34.40 52 5.29 Changed GAG-polyprotein viral zinc-finger
zf-CCHC_6 PF15288 Domain 22 436 36.40 43 3.28 Changed Zinc knuckle
zf-CCHH PF10283 Domain 89 446 24.50 50 6.87 Changed Zinc-finger (CX5CX6HX5H) motif
zf-CDGSH PF09360 Domain 217 2694 43.10 31 40.03 Changed Iron-binding zinc finger CDGSH type
zf-CGNR PF11706 Domain 264 2228 43.50 42 22.85 Changed CGNR zinc finger
zf-CHC2 PF01807 Domain 18 20814 97.00 42 16.54 Changed CHC2 zinc finger
zf-CHCC PF10276 Domain 121 2041 37.40 38 40.64 Changed Zinc-finger domain
zf-CHY PF05495 Domain 282 6281 81.80 58 45.84 Changed CHY zinc finger
zf-CpG_bind_C PF12269 Domain 30 241 204.90 48 40.38 Changed CpG binding protein zinc finger C terminal domain
zf-CSL PF05207 Domain 60 1036 58.60 39 40.30 Changed CSL zinc finger
zf-CW PF07496 Domain 217 1391 47.10 35 5.98 Changed CW-type Zinc Finger
zf-CXXC PF02008 Domain 31 1437 46.30 45 4.92 Changed CXXC zinc finger domain
zf-DBF PF07535 Domain 114 507 45.80 39 6.52 Changed DBF zinc finger
zf-DHHC PF01529 Family 75 8153 128.70 26 30.86 Changed DHHC palmitoyltransferase
zf-Di19 PF05605 Domain 48 1203 57.50 32 13.51 Changed Drought induced 19 protein (Di19), zinc-binding
zf-DNA_Pol PF08996 Domain 148 574 182.20 29 13.31 Changed DNA Polymerase alpha zinc finger
zf-DNL PF05180 Domain 120 686 64.30 42 32.59 Changed DNL zinc finger
zf-Dof PF02701 Family 57 1619 57.60 68 19.00 Changed Dof domain, zinc finger
zf-dskA_traR PF01258 Family 149 19945 36.50 40 30.18 Changed Prokaryotic dksA/traR C4-type zinc finger
zf-FCS PF06467 Domain 41 2220 41.70 26 17.05 Changed MYM-type Zinc finger with FCS sequence motif
zf-FLZ PF04570 Family 65 964 50.60 41 28.07 Changed zinc-finger of the FCS-type, C2-C2
zf-FPG_IleRS PF06827 Domain 100 35892 29.50 36 5.95 Changed Zinc finger found in FPG and IleRS
zf-GRF PF06839 Domain 12 2450 44.70 32 10.37 Changed GRF zinc finger
zf-H2C2 PF09337 Domain 26 1060 38.80 34 5.94 Changed His(2)-Cys(2) zinc finger
zf-H2C2_2 PF13465 Domain 159 2274 25.90 61 7.56 Changed Zinc-finger double domain
zf-H2C2_5 PF13909 Domain 72 18291 24.80 30 11.82 Changed C2H2-type zinc-finger domain
zf-H3C2 PF16721 Domain 1 76 99.50 69 7.68 New Zinc-finger like, probable DNA-binding
zf-HC2 PF13490 Domain 663 9589 32.80 36 15.31 Changed Putative zinc-finger
zf-HC3 PF16827 Domain 10 28 65.90 46 73.58 New zinc-finger
zf-HC5HC2H PF13771 Domain 108 1757 84.50 29 6.16 Changed PHD-like zinc-binding domain
zf-HC5HC2H_2 PF13832 Domain 32 3124 112.20 32 9.88 Changed PHD-zinc-finger like domain
ZF-HD_dimer PF04770 Family 65 657 53.70 58 23.01 Changed ZF-HD protein dimerisation region
zf-His_Me_endon PF05551 Domain 11 89 117.30 26 36.98 Changed Zinc-binding loop region of homing endonuclease
zf-HIT PF04438 Domain 93 1972 30.60 37 9.21 Changed HIT zinc finger
zf-HYPF PF07503 Domain 600 9560 33.90 49 9.12 Changed HypF finger
zf-IS66 PF13005 Domain 211 11060 44.40 46 10.44 Changed zinc-finger binding domain of transposase IS66
zf-ISL3 PF14690 Domain 76 15022 48.30 36 13.70 Changed zinc-finger of transposase IS204/IS1001/IS1096/IS1165
zf-like PF04071 Family 31 522 80.30 51 60.75 Changed Cysteine-rich small domain
zf-LITAF-like PF10601 Family 368 1248 68.30 27 36.56 Changed LITAF-like zinc ribbon domain
zf-LSD1 PF06943 Domain 98 752 24.90 53 19.67 Changed LSD1 zinc finger
zf-LYAR PF08790 Domain 98 555 27.60 53 7.99 Changed LYAR-type C2HC zinc finger
zf-met PF12874 Domain 343 20105 23.40 28 5.94 Changed Zinc-finger of C2H2 type
zf-met2 PF12907 Family 10 346 36.90 46 31.29 Changed Zinc-binding
zf-MIZ PF02891 Domain 33 1753 50.50 42 7.19 Changed MIZ/SP-RING zinc finger
zf-Mss51 PF13824 Domain 79 283 65.60 46 12.87 Changed Zinc-finger of mitochondrial splicing suppressor 51
zf-MYND PF01753 Family 158 6830 41.40 35 7.84 Changed MYND finger
zf-NADH-PPase PF09297 Domain 56 9099 31.90 39 11.34 Changed NADH pyrophosphatase zinc ribbon domain
zf-nanos PF05741 Family 84 424 54.60 54 24.55 Changed Nanos RNA binding domain
zf-NF-X1 PF01422 Family 127 4773 19.90 47 16.54 Changed NF-X1 type zinc finger
zf-NOSIP PF15906 Domain 2 477 69.30 51 23.09 New Zinc-finger of nitric oxide synthase-interacting protein
zf-NPL4 PF05020 Family 84 541 135.00 46 22.91 Changed NPL4 family, putative zinc binding region
zf-Nse PF11789 Domain 21 648 60.10 31 19.15 Changed Zinc-finger of the MIZ type in Nse subunit
zf-P11 PF03854 Family 3 129 49.90 59 52.88 Changed P-11 zinc finger
zf-Paramyx-P PF13008 Domain 7 190 45.10 49 15.90 Changed Zinc-binding domain of Paramyxoviridae V protein
zf-PARP PF00645 Domain 230 1196 81.30 28 14.80 Changed Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PHD-like PF15446 Domain 52 178 166.70 46 10.52 Changed PHD/FYVE-zinc-finger like domain
zf-piccolo PF05715 Domain 37 295 58.00 63 3.08 Changed Piccolo Zn-finger
zf-primase PF09329 Domain 149 534 45.80 36 6.56 Changed Primase zinc finger
zf-RAG1 PF10426 Domain 7 6486 29.30 66 5.43 Changed Recombination-activating protein 1 zinc-finger domain
zf-RanBP PF00641 Domain 24 5887 29.70 34 8.02 Changed Zn-finger in Ran binding protein and others
zf-rbx1 PF12678 Family 109 1960 74.10 35 25.52 Changed RING-H2 zinc finger
zf-ribbon_3 PF13248 Domain 29 1249 25.20 39 9.64 Changed zinc-ribbon domain
zf-RING-like PF08746 Domain 114 415 43.40 35 14.16 Changed RING-like domain
zf-RING_10 PF16685 Domain 17 142 67.30 57 11.60 New zinc RING finger of MSL2
zf-RING_11 PF17123 Domain 150 888 29.20 43 6.45 New RING-like zinc finger
zf-RING_2 PF13639 Domain 322 24122 45.70 36 10.56 Changed Ring finger domain
zf-RING_4 PF14570 Domain 54 943 48.20 49 5.38 Changed RING/Ubox like zinc-binding domain
zf-RING_5 PF14634 Domain 90 1337 48.20 29 12.28 Changed zinc-RING finger domain
zf-RING_6 PF14835 Domain 1 95 62.00 56 9.37 Changed zf-RING of BARD1-type protein
zf-RING_7 PF02591 Domain 205 3613 34.20 49 13.82 Changed C4-type zinc ribbon domain
zf-RING_9 PF13901 Domain 126 765 184.40 34 26.99 Changed Putative zinc-RING and/or ribbon
zf-RING_UBOX PF13445 Domain 77 2075 43.10 35 8.91 Changed RING-type zinc-finger
zf-RNPHF PF08080 Domain 4 217 33.80 76 8.60 Changed RNPHF zinc finger
zf-RRPl_C4 PF17026 Family 14 21 105.90 34 48.70 New Putative ribonucleoprotein zinc-finger pf C4 type
zf-RVT PF13966 Domain 279 2437 79.40 24 14.76 Changed zinc-binding in reverse transcriptase
zf-SAP30 PF13866 Domain 15 196 65.70 66 34.53 Changed SAP30 zinc-finger
zf-SCNM1 PF15803 Family 20 103 27.00 64 11.35 New Zinc-finger of sodium channel modifier 1
zf-Sec23_Sec24 PF04810 Domain 362 2656 38.90 40 4.51 Changed Sec23/Sec24 zinc finger
zf-SNAP50_C PF12251 Family 80 385 183.90 28 44.89 Changed snRNA-activating protein of 50kDa MW C terminal
zf-TAZ PF02135 Family 214 1366 75.00 34 9.06 Changed TAZ zinc finger
zf-tcix PF14952 Domain 13 105 41.40 66 7.55 Changed Putative treble-clef, zinc-finger, Zn-binding
zf-TFIIB PF13453 Domain 72 1313 40.80 41 37.60 Changed Transcription factor zinc-finger
zf-TFIIIC PF12660 Domain 20 334 96.80 23 13.53 Changed Putative zinc-finger of transcription factor IIIC complex
zf-Tim10_DDP PF02953 Domain 463 2636 62.90 26 62.02 Changed Tim10/DDP family zinc finger
zf-TRAF PF02176 Family 9 2261 56.00 27 18.04 Changed TRAF-type zinc finger
zf-TRAF_2 PF15965 Domain 33 233 89.60 54 13.50 New TRAF-like zinc-finger
zf-trcl PF13451 Domain 96 774 47.80 57 47.65 Changed Probable zinc-ribbon domain
zf-TRM13_CCCH PF11722 Domain 96 319 29.00 39 5.68 Changed CCCH zinc finger in TRM13 protein
zf-U1 PF06220 Domain 11 1236 36.50 39 15.27 Changed U1 zinc finger
zf-U11-48K PF05253 Domain 232 1052 24.80 36 10.24 Changed U11-48K-like CHHC zinc finger
zf-UBP PF02148 Domain 169 4125 68.00 30 11.73 Changed Zn-finger in ubiquitin-hydrolases and other protein
zf-UBR PF02207 Family 318 1829 69.10 32 4.47 Changed Putative zinc finger in N-recognin (UBR box)
zf-UDP PF14569 Domain 31 776 74.90 53 8.48 Changed Zinc-binding RING-finger
zf-XS PF03470 Domain 12 343 41.70 44 7.61 Changed XS zinc finger domain
zf-ZPR1 PF03367 Family 331 1508 154.60 34 66.22 Changed ZPR1 zinc-finger domain
Zfx_Zfy_act PF04704 Family 15 347 233.90 53 43.00 Changed Zfx / Zfy transcription activation region
ZFYVE21_C PF16696 Domain 18 111 129.10 57 55.52 New Zinc finger FYVE domain-containing protein 21 C-terminus
Zf_RING PF16744 Domain 9 81 70.90 70 18.60 New KIAA1045 RING finger
zinc-ribbons_6 PF07191 Family 29 3430 66.70 68 92.47 Changed zinc-ribbons
zinc-ribbon_6 PF10005 Domain 26 2349 83.70 68 24.29 Changed zinc-ribbon domain
Zincin_1 PF06262 Family 115 5161 92.50 37 67.38 Changed Zinicin-like metallopeptidase
zinc_ribbon_10 PF10058 Family 28 576 52.90 43 14.36 Changed Predicted integral membrane zinc-ribbon metal-binding protein
zinc_ribbon_11 PF11682 Family 2 4164 117.40 48 91.52 Changed Probable zinc-ribbon
zinc_ribbon_12 PF11331 Family 49 241 44.50 42 5.77 Changed Probable zinc-ribbon domain
zinc_ribbon_13 PF09855 Family 42 802 62.30 58 86.21 Changed Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
zinc_ribbon_15 PF17032 Domain 27 232 76.80 27 65.65 New zinc-ribbon family
zinc_ribbon_16 PF17034 Family 3 437 112.30 31 11.64 New Zinc-ribbon like family
zinc_ribbon_2 PF13240 Domain 238 4080 22.90 41 7.74 Changed zinc-ribbon domain
zinc_ribbon_4 PF13717 Domain 59 100 36.00 33 8.03 Changed zinc-ribbon domain
zinc_ribbon_5 PF13719 Domain 62 1247 36.70 42 9.61 Changed zinc-ribbon domain
zinc_ribbon_6 PF14599 Domain 134 744 58.00 44 11.50 Changed Zinc-ribbon
zinc_ribbon_9 PF14369 Domain 71 646 33.70 40 9.97 Changed zinc-ribbon
Zinicin_2 PF10103 Family 156 4665 331.60 43 82.32 Changed Zinicin-like metallopeptidase
ZinT PF09223 Domain 53 9213 179.10 64 44.57 Changed ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
Zip PF02535 Family 37 20812 183.00 18 77.13 Changed ZIP Zinc transporter
ZipA_C PF04354 Domain 115 5732 125.90 49 38.19 Changed ZipA, C-terminal FtsZ-binding domain
ZirS_C PF16583 Family 1 794 143.80 71 52.74 New Zinc-regulated secreted antivirulence protein C-terminal domain
zn-ribbon_14 PF16503 Family 80 526 31.60 55 8.55 New Zinc-ribbon
Zn-ribbon_8 PF09723 Domain 584 4309 40.40 45 40.79 Changed Zinc ribbon domain
ZnuA PF01297 Family 1006 32759 270.80 26 76.49 Changed Zinc-uptake complex component A periplasmic
Zn_clus PF00172 Domain 29 35184 39.10 32 5.84 Changed Fungal Zn(2)-Cys(6) binuclear cluster domain
Zn_dep_PLPC PF00882 Domain 149 1917 176.90 18 56.65 Changed Zinc dependent phospholipase C
Zn_peptidase PF04228 Family 7 8671 278.90 50 95.55 Changed Putative neutral zinc metallopeptidase
Zn_peptidase_2 PF04298 Family 388 6863 219.50 65 95.43 Changed Putative neutral zinc metallopeptidase
Zn_protease PF05618 Family 10 3285 135.70 36 65.63 Changed Putative ATP-dependant zinc protease
Zn_ribbon_17 PF17120 Domain 9 473 56.00 36 5.00 New Zinc-ribbon, C4HC2 type
Zn_ribbon_2 PF12674 Domain 129 1278 78.40 39 60.77 Changed Putative zinc ribbon domain
Zn_ribbon_recom PF13408 Domain 332 13280 62.20 28 12.80 Changed Recombinase zinc beta ribbon domain
Zn_Tnp_IS1 PF03811 Domain 3 7562 31.00 65 31.22 Changed InsA N-terminal domain
Zn_Tnp_IS1595 PF12760 Domain 38 1147 47.90 31 16.43 Changed Transposase zinc-ribbon domain
Zn_Tnp_IS91 PF14319 Family 92 3116 105.20 38 33.23 Changed Transposase zinc-binding domain
Zona_pellucida PF00100 Family 446 3627 229.20 16 42.00 Changed Zona pellucida-like domain
ZoocinA_TRD PF16775 Domain 4 386 104.90 64 35.08 New Target recognition domain of lytic exoenzyme
Zot PF05707 Domain 7 1770 183.40 23 50.85 Changed Zonular occludens toxin (Zot)
ZT_dimer PF16916 Domain 469 19983 77.90 29 24.58 New Dimerisation domain of Zinc Transporter
ZU5 PF00791 Family 99 2157 93.30 27 7.90 Changed ZU5 domain
Zw10 PF06248 Family 8 567 430.60 18 61.35 Changed Centromere/kinetochore Zw10
Zwint PF15556 Family 7 61 203.50 67 87.15 Changed ZW10 interactor
ZYG-11_interact PF05884 Family 8 58 236.50 24 90.93 Changed Interactor of ZYG-11
ZZ PF00569 Domain 7 4798 44.40 30 4.61 Changed Zinc finger, ZZ type
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z