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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A0P0XVR4_ORYSJ (A0A0P0XVR4)

Summary

This is the summary of UniProt entry A0A0P0XVR4_ORYSJ (A0A0P0XVR4).

Description: DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418}
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 801 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 6
Pfam RNA_pol_Rpb2_1 20 414
disorder n/a 79 80
Pfam RNA_pol_Rpb2_2 183 367
Pfam RNA_pol_Rpb2_3 450 515
Pfam RNA_pol_Rpa2_4 569 626
disorder n/a 665 668
Pfam RNA_pol_Rpb2_6 684 795

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A0P0XVR4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAGKSSSAS KEDQYAALRE LYRPHIDSFD YFIDEGLDKM LQSIRPVEIT
50
51
VPNSPTTLRI SLEKGHLFPP KRDGRLDAPL YPQQCRQART TYHGEFKVDT
100
101
FIQCNDGPAV RQTFNFGYLP IMLMSKLCHL RGADSEKLIF HGEEATEMGG
150
151
YFICGGMERL VRILILQKRN YPMGLIRGSF VNRGAGYTDK AVIIRCVQDD
200
201
QSSVTIKLYY LLNGSARLGF WLGGREFLLP VGIVLKALID TSDREIFTSL
250
251
TCCYSDHYER GKGVVSTQLI GERAQIILDE VRDLSLFTRT ECLLHLGKYF
300
301
RSVMEGFEKD DFETVAEAVL KDYIFVHLQN NHDKFNLLIF MLQKLYAIVD
350
351
QTASPDKADA LQYQEVLLPG HLITVFLKDR LQDWLRKSKR LIVEEATKNK
400
401
SFDLNDSQEV RKFLSKTSAY VGKAIQSMIK VGKVNSQSGL DLPQRDGMTI
450
451
HAERLNFHRY ISHFRSVHRG SSFAKMRTTS VRKLLPESWG FLCPVHTPDG
500
501
EPCGLLNHMT STCRISSFYN SEGATKDFQK IKMSLIARLV GAGMAQLLPR
550
551
IERTGPPEVL HVHVDGCIVG SIASAKIEEV VNHLRSLKLL PHSGIPEDLE
600
601
VGYVPLSHGG AYPGLYLFTN PARFLRPVRS LLGLSNGGPN IELIGPFEQA
650
651
FMEIRCPDGG DGGRNKLFPA THEEIHPTAI LSVVANLTPW SDHNQSPRNM
700
701
YQCQMAKQTM GFCGQALKFR TDVKAFHLQT PQTPIVRTAT YSKYCMDEFP
750
751
SGTNAIVAVL SYTGYDMEDA MILNKSAVDR GMFRGHIFQV SKCFFPFFGD
800
801
S                                                     
801
 

Show the unformatted sequence.

Checksums:
CRC64:3241B026BF1F8E05
MD5:c1b03aea90b52d0359f26bde1e534733

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;