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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D6E7H3_MAIZE (A0A1D6E7H3)

Summary

This is the summary of UniProt entry A0A1D6E7H3_MAIZE (A0A1D6E7H3).

Description: DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}
Source organism: Zea mays (Maize) (NCBI taxonomy ID 4577)
Length: 1394 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 21 345
disorder n/a 62 64
disorder n/a 144 145
low_complexity n/a 251 262
disorder n/a 260 263
disorder n/a 325 329
disorder n/a 345 346
Pfam RNA_pol_Rpb1_2 347 513
disorder n/a 352 354
disorder n/a 356 357
disorder n/a 420 422
disorder n/a 495 496
Pfam RNA_pol_Rpb1_3 516 704
low_complexity n/a 611 624
disorder n/a 614 615
disorder n/a 619 621
disorder n/a 623 626
disorder n/a 708 713
disorder n/a 715 716
Pfam RNA_pol_Rpb1_4 729 835
Pfam RNA_pol_Rpb1_5 842 1329
disorder n/a 913 915
low_complexity n/a 1009 1019
low_complexity n/a 1038 1054
disorder n/a 1257 1261
disorder n/a 1267 1268

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D6E7H3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAKPEEKLRC TKEPFIEDVG TRRIKSIRFS VLSGSEIRKS AEVQVWNNRI
50
51
YDRDMTPVPN GLLDPRMGIP TKRGKCNTCH GEFSDCPGHF GYLKLALPVF
100
101
NVGFFNCILD VLKCICKSCS RVLLIEKDRR EFLKKMRNPR ADALQKSATM
150
151
KKVRDKCKLS CCPRCDYRNG VVKKGRAGLI VVHDCSKVLD GHTEELKNAL
200
201
QNKKEKVSAS SVLVLDPATV LSLFRRMIDE DCELLNLGDR PEKLIVTEIA
250
251
VPPVPIRPSV VVGNSRTSNE DSITVILKSI VNTNSILKET LHTGGPFTKC
300
301
FDCWQYLQLQ VVEYVNSDAP SLPESQHRGL VQRLKGKTGR FRGNLSGKRT
350
351
EYTGRTVISP DPNLKITEVA IPVLMARVLT YPERVSNYNI EKLRQCIRNG
400
401
PFKYPGANFV TQPDGMKQSL KYGDRRITAR DLKCGCIVER HLEDGDVVLF
450
451
NRQPSLHRMS IMCHRARIMP WRTLRFNESV CNPYNADFDG DEMNLHVPQT
500
501
EEARTEALML MGVQNNLCTP KNGEILVAST QDFLTSSFLV TRKDTFYDRS
550
551
SFTLLCSYLG DGMENIDLPT PALIKPVELW TGKQLFSVLV RPNAHTKVFL
600
601
NLAVQEKIYS KKKGKKEGGE EVKETMCGRE TMCPNDGYVY FRNSELLSGQ
650
651
VGKATLGNGN KDGLYSVLLR DYNSHAAASC MNRLAKFSAR FIGNHGFSIG
700
701
VDDVQPGEHL NRQKKKEIDG GYKKCHDLIS LFAKGALALH PGCNAAQTLE
750
751
HNITGVLNEI RSIAGNVCMD TLHWRNSPLI MSQCGSKGSP INISQMVACV
800
801
GQQSVGGRRA PDGFLNRTLP HFPINSKTPA AKGFVANSFY TGLTATEFFF
850
851
HTMGGREGLV DTAVKTAETG YMSRRLMKGL EDLSVFYDQT VRNASGGIVQ
900
901
FLYGDDGMDP AKMEGKDGMP LNLDQLFMKV MATCPQRGSD TLSPVGIKQM
950
951
LEDKFLQHDT SSDGGCSAEF KKNLTEFLDK RIELMKCTRR ALHLHEDHVE
1000
1001
KKDSCLEESI AAIISGISAK QLQVFLDTCL SRYQSKKIEA GASIGAIGAQ
1050
1051
SIGEPGTQMT LKTFHFAGVA SMNVTLGVPR IKEIINAAKK ISTPIITAQL
1100
1101
LSRKDVLSAR IVKGSMEKAV LGEVAATIQT VLKSSLPNLV VKLDMQLIET
1150
1151
LHMGISADSV KLSILNHPKL KLKSEHVRVI DRAKLRIYPA GTDKLKLQLE
1200
1201
LHNLKSILPK VIVKGIPTVE RVVIDEVKVN NATERYQLLV EGTNLLAVMG
1250
1251
TPGVDARKTK SNHIMETNQT LGIEAARRSI IDEIQYTMKS HGMNIDRRHM
1300
1301
MLLADLMTYK GEILGITRYG IAKMKSSVLM LASFEKTAEH LFNASYSGRQ
1350
1351
DQIEGVSECI IMGIPMQLGT GILKVRQRLD HVPEFKYQPD PILS      
1394
 

Show the unformatted sequence.

Checksums:
CRC64:CAD519F622FDB5CA
MD5:d1c260f8e9ff69013c9b0c806d6e03ed

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;