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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D6JIG9_MAIZE (A0A1D6JIG9)

Summary

This is the summary of UniProt entry A0A1D6JIG9_MAIZE (A0A1D6JIG9).

Description: DNA mismatch repair protein MSH3 {ECO:0000313|EMBL:AQK47383.1}
Source organism: Zea mays (Maize) (NCBI taxonomy ID 4577)
Length: 1338 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
low_complexity n/a 2 9
Pfam NUDIX_2 7 209
disorder n/a 28 31
disorder n/a 206 207
disorder n/a 209 355
low_complexity n/a 213 225
low_complexity n/a 217 230
low_complexity n/a 258 285
low_complexity n/a 307 321
Pfam MutS_I 350 464
low_complexity n/a 383 389
low_complexity n/a 461 478
Pfam MutS_II 480 645
disorder n/a 598 604
Pfam MutS_III 666 997
disorder n/a 738 739
Pfam MutS_IV 872 957
low_complexity n/a 943 958
Pfam MutS_V 1052 1259
disorder n/a 1269 1281
disorder n/a 1324 1326

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D6JIG9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVSSSSSVVN VYPLANYTFG TKEPKMEKDT SVADRLARMK VNYMKEGMRT
50
51
SVEAILLVQE HNHPHILLLQ IGNTFCKLPG GRLKPGENEI EGLKRKLCSK
100
101
LAVNSPSFPP NWQLGQHKSL PVVKKGVHDC HFQVGECVAV WWRPNFETVM
150
151
YPYCPPHITK PKECKKLFIV HLSEREYFAV PRNLKLLAVP LFELYDNIQL
200
201
EARATSRKPL KTHVAVAGAP APHAPTFPAP TDQANGGHAH AMGKPKQQVL
250
251
SRFFSPKPAP VLSSAAPDPP PPLPPNPKPS AAHPPVSTVA SFSPAKRARA
300
301
LSLSPKSPAA KRPNPTPPPS RDAVRRRLLE PLHQEPPRLL DPTGGGKGYT
350
351
PLEQQVVDLK ARHPDVLLMV EVGYRFRFFG EDAAVAAAVL GIVAHPDRSF
400
401
LTASVPNFRL GFHVRRLVAA GHKVGVVRQT ETAAIKAAAR GVGGAPFSRG
450
451
LSAVYTRATI EAAAGELEGG GAAAPEEGSS YLVCIVDKEV EAAGREGLQV
500
501
KVGLVAIEVS TGEVVHGEFL DSDSRSGLEA LLLGLAPVEV ILGTPLSFAT
550
551
EKIMMAYVGP TSNVRVERVS CEWFGKDAAL AELITLFEKS VNNASRAEDD
600
601
RKLIETNDDN NNFHGIEGIM AMPELVVQAL ALSVRYLKGF GMERIICFGS
650
651
SFRPFSADAE FSLSANALQQ LEVFRNNSDG TTEGSLFQIM NNTCTSFGSR
700
701
LLRNWLTRPL CNRHLICARH DAVSEIFESM GPQHSVNNLQ DGGDRSCTAS
750
751
VLSDLCIVLS SVLALLGRSP DIQRGISRIF HCKATAKEFV GVIQSILTSG
800
801
KQLQKLVLED IGIVSSPHKS VHSPLLRRLI NTASSSTILN SAVKLLSCLN
850
851
KDAADQGDML NLFIASVDQF PEVAEGHVNV KMAEHKLDLL IVEYRKQFAM
900
901
HNLEFKTVAG TTHLIELPVD RRVPSNWIKI NSTKKAIRYH TPEILKNLDK
950
951
LLLAKEELAV ICRSMWHKFL TDFGKYYAQF QAVVESLAAL DCLYSLAVLA
1000
1001
KQNNYIRPIF VHDNEPSQIH IKDGRHPVLE SLLGDNFVPN DTELHADGEY
1050
1051
CQIVTGPNMG GKSCYIRQVA LITMMAQVGS FVPASSAMLH VVDGIYTRMG
1100
1101
ASDSIQQGIS TFHEEMNEAS NILHNCSSRS LVIIDELGRG TSTHDGVAIA
1150
1151
YSTLHYLLKE KKCIVIFVTH YPKILDIQRE FEGSVGAYHV SYLATRKLLE
1200
1201
VTDKQVETSP EANDLGEIIF LYKLVAGASD RSFGLNVALL AQLPSRCIKR
1250
1251
ASVMAAKLQE ELSPREEIKL RRTTDAQTVD GPSESSAEVG LFCAHPYQRL
1300
1301
AETCRRILLN ITLAQSNNDV TNTLPSLKNA QEIAQKTI             
1338
 

Show the unformatted sequence.

Checksums:
CRC64:6BF1DA17644A2257
MD5:95836e05523113831434b564db1482a8

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;