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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: A3DDK4_CLOTH (A3DDK4)

Summary

This is the summary of UniProt entry A3DDK4_CLOTH (A3DDK4).

Description: Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ABN52033.1}
Source organism: Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum) (NCBI taxonomy ID 203119)
View Pfam proteome data.
Length: 528 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 33
Pfam Lipase_GDSL_2 41 216
disorder n/a 81 90
low_complexity n/a 118 139
disorder n/a 235 253
low_complexity n/a 237 253
Pfam Lipase_GDSL_2 257 432
disorder n/a 297 309
disorder n/a 451 472
low_complexity n/a 453 465
Pfam Dockerin_1 472 492
Pfam Dockerin_1 506 526

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A3DDK4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MYKSKNLAAK VLSTLLIFIT VISLINMEAP AASKTIKIMP VGDSCTEGMG
50
51
GGEMGSYRTE LYRLLTQAGL SIDFVGSQRS GPSSLPDKDH EGHSGWTIPQ
100
101
IASNINNWLN THNPDVVFLW IGGNDLLLNG NLNATGLSNL IDQIFTVKPN
150
151
VTLFVADYYP WPEAIKQYNA VIPGIVQQKA NAGKKVYFVK LSEIQFDRNT
200
201
DISWDGLHLS EIGYKKIANI WYKYTIDILR ALAGETQPNP SPSSTPNTTK
250
251
TIKIMPVGDS CTEGMGGGEM GSYRTELYRL LTQAGLSIDF VGSQRSGPSS
300
301
LPDKDHEGHS GWTIPQIASN INNWLNTHNP DVVFLWIGGN DLLLSGNVNA
350
351
TGLSNLIDQI FTVKPNVTLF VADYYPWPEA VKQYNAVIPG IVQQKANAGK
400
401
KVYFVKLSEI QFDRNTDISW DGLHLSEIGY TKIANIWYKY TIDILKALAG
450
451
QTQPTPSPSP TPTDSPLVKK GDVNLDGQVN STDFSLLKRY ILKVVDINSI
500
501
NVTNADMNND GNINSTDISI LKRILLRN                        
528
 

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Checksums:
CRC64:8A25788A79D345FE
MD5:a9d6028125cc323afc38883c4bb61133

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Lipase_GDSL_2 41 - 216 2VPT A 41 - 216 Jmol OpenAstexViewer