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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RTL1_HUMAN (A6NKG5)

Summary

This is the summary of UniProt entry RTL1_HUMAN (A6NKG5).

Description: Retrotransposon-like protein 1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 1358 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 1 161
low_complexity n/a 18 29
Pfam DUF4939 185 284
disorder n/a 203 204
disorder n/a 563 604
low_complexity n/a 578 594
disorder n/a 606 610
disorder n/a 619 622
Pfam RT_RNaseH_2 845 947
disorder n/a 1026 1039
low_complexity n/a 1028 1042
transmembrane n/a 1083 1105
low_complexity n/a 1089 1101
low_complexity n/a 1121 1132
transmembrane n/a 1126 1146
disorder n/a 1247 1285
low_complexity n/a 1266 1279
disorder n/a 1336 1358

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A6NKG5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MIEPSEDSFE TMMEHKNPSS KQMESSEGSS NTTEATSGSG VRGEAGPASG
50
51
PAQEKKEPPS GPLQEMEELP TDLLQDMEEP SSGPRKEIED PPNDLLQDLE
100
101
ESCNGSHQAR GDPLSGASDR MKEASVNPSG AREEQEAHTD LKESGREETP
150
151
QEQNQTEHST AELMAMVRSI ISLYFRMQDL KEQQRVAEEI LIKGINAGQL
200
201
PAPKHFSGDR REFHEFIVLC QLTLQSYPRM FYNDRLRVGY VINHLSGLAL
250
251
EWAKALLQEN SPLIGDFPAF LEAMSEVFEY RQALRVAEEA MFTIRQGGRS
300
301
ATEYIDEFQS LVPILGWPDE VLQAHLCQGL NEEIRHYLFR VPQPDSLDSL
350
351
IVLILQIEEK LAERRAMLRL PPEARPRNLT WIDSPAPERW MVSSWLPSEV
400
401
HPDINRAHLF LLLMVRVNPY HSVAVQALVD SGADGNFMDE KFAQEHYVEL
450
451
YEKPYPQPVQ SVDGSLIGNE PVWLYTEPLV CIHQNHQESI EFDIVPSPNF
500
501
SVVLGIRWLR VHAPEVDWIK GRCTFHSPYC LKNCFRPPPP CIALERHGMS
550
551
LLPGLPHPYS DLADVFNPKE ADDETSDQPS SDGSDDLSES EPSELQQAGD
600
601
SDHSETFYEC PSTAPWEPVG ARMQERARLQ EEYWDLQDML TNRQDYIQMI
650
651
PELFDQLHGA EWFTKLELRG TIVEESVNGH RTEDVWKAAF GLELEEMKSY
700
701
QPFALSPDPI IPQNVIHFIL KDMLGFFVLS YGQEVLIYSM SQEEHLHHVR
750
751
QVLVRFRHHN VYCSLDKSQF HRQTVEFLGF VVTPKGVKLN KNVMTIITGY
800
801
PTPGSKLSLR NFIEFVFPYR HFVERFSIIA EPLVRQLLSS YQFYWGVEEQ
850
851
EAFECLKRAF RKAPLLHHPK PQNPFYLETG VTGTALHASL IQIDDQTGKR
900
901
ACCAFYSRNI SPIEVEYSQA EMKILPIRAA FMVWCRYLEN TEEPIMILLN
950
951
TEDLASLNND RLTVLLPGHW VFFFSHFNFD VMELPEQDGG RALPPVRNLR
1000
1001
WRRAFQRNTA ARQTLLLASR GFPRDPSTES GEEENEEQDE LNEQILRQEL
1050
1051
LAMIPIDQIL NSFLAHFSMA QIRAVILHFF RGLLYWKNTL ALAAILVLLR
1100
1101
VRQCLSLRPA PAMRVARPQP QRSLRLILDS SLIAGSSITT AITQLLTQMP
1150
1151
ALVGANTIPA QELAELFLGP GRWQRNALHS QAHRGLQFTP GFWLTLCEFF
1200
1201
GVRVTPQEGH LPALRQNRYL ELHVVGDEDV VLREALQDDL QRYRQCGLHD
1250
1251
GLQDTSQDKQ DNDVQEAPPS HTAATHPPRP RHLMDPQVLE FLGSRLLHIH
1300
1301
SADGQLHLLS REQAARALSQ FLTLIYRRAL PIPAWESQPR EQARLEELPD
1350
1351
EDEDANLD                                              
1358
 

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Checksums:
CRC64:09FAB4E2EA555E7F
MD5:f21e4c956d4988d58d3d5f82a904905f

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.