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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SPT61_ARATH (A8MS85)

Summary

This is the summary of UniProt entry SPT61_ARATH (A8MS85).

Description: Transcription elongation factor SPT6 homolog {ECO:0000305}
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 1647 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 100
low_complexity n/a 8 21
low_complexity n/a 26 49
Pfam SPT6_acidic 29 118
coiled_coil n/a 54 81
low_complexity n/a 55 93
low_complexity n/a 103 117
disorder n/a 107 174
low_complexity n/a 151 180
disorder n/a 179 218
disorder n/a 239 289
disorder n/a 358 361
low_complexity n/a 382 394
Pfam YqgF 712 871
disorder n/a 755 770
Pfam HHH_7 875 976
Pfam HHH_9 989 1077
disorder n/a 1014 1015
disorder n/a 1027 1029
disorder n/a 1087 1089
disorder n/a 1091 1093
disorder n/a 1183 1191
Pfam SH2_2 1192 1409
disorder n/a 1416 1647
low_complexity n/a 1437 1455
low_complexity n/a 1455 1476
low_complexity n/a 1486 1497
low_complexity n/a 1506 1525
low_complexity n/a 1516 1537
low_complexity n/a 1532 1554
low_complexity n/a 1557 1585
low_complexity n/a 1576 1608
low_complexity n/a 1610 1632

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A8MS85. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARNAISDDE EDHELEDDDG EPVHGDPAEH DENDDEEDDD DVGNEYENDG
50
51
FIVNDEDEEE EEEEDEERKD SDEERQKKKK KRKKKDEGLD EDDYLLLQDN
100
101
NVKFKKRQYK RLKKAQREQG NGQGESSDDE FDSRGGTRRS AEDKIKDRLF
150
151
DDVDVDDPPD DVGDEEDLVV EEDVVGSEDE MADFIVDEDD EHGPPKRGNS
200
201
KKKKYRQGSD ITAMRDANEI FGDVDELLTI RKKGLASNQR MERRLEDEFE
250
251
PTVLSEKYMT GNDDEIRQLD IPERMQISEE STGSPPVDEI SIEEESNWIY
300
301
AQLASQLRES DGTFDGRGFS VNKDDIAKFL ELHHVQKLEI PFIAMYRKEQ
350
351
CRSLLDTGDF DGANQGKKPE TKWHKVFWMI HDLDKKWLLL RKRKMALHGY
400
401
YTKRYEEESR RVYDETRLNL NQYLFESVIK SLKVAETERE VDDVDSKFNL
450
451
HFPPGEIGVD EGQYKRPKRK SQYSICSKAG LWEVANKFGY SAEQLGLALS
500
501
LEKLVDELED AKETPEEMAK NFVCAMFENS LAVLKGARHM AAVEISCEPS
550
551
VKKYVRGIYM ENAVVSTSPT ADGNTVIDSF HQFSGIKWLR EKPLSKFEGA
600
601
QWLLIQKGEE EKLLQVTFKL PENYMNRLIS DCNEHYLSVG VSKYAQLWNE
650
651
QRKLILEDAL HAFLLPSMEK EARSLLTSRA KSRLLSEYGQ ALWNKVSAGP
700
701
YQKKEMDINL DEEAAPRVMA CCWGPGKPPN TFVMLDSSGE VLDVLYAGSL
750
751
TSRSQNVNDQ QRKKSDQDRV LKFMMDHQPH VVALGAVNLS CTRLKDDIYE
800
801
VIFQMVEEKP RDVGHGMDDL SIVYVDESLP RLYENSRISG EQLPQQSGNV
850
851
RRAVALGRYL QNPLAMVATL CGPGREILSW KLHPLENFLQ LDEKYGMVEQ
900
901
VMVDITNQVG IDINLAASHD WFFSPLQFIS GLGPRKAASL QRSLVRAGSI
950
951
FVRKDLIMHG LGKKVFVNAA GFLRIRRSGL AASSSQFIDL LDDTRIHPES
1000
1001
YSLAQELAKD IYDEDVRGDS NDDEDAIEMA IEHVRDRPAS LRKVVLDEYL
1050
1051
ASKKRENKKE TYSNIIRELS CGFQDWRIPF KEPSPDEEFY MISGETEDTI
1100
1101
AEGRIVQASV RRLQNGRAIC VLDSGLTGML MKEDFSDDGR DIVDLADQLK
1150
1151
EGDILTCKIK SIQKQRYQVF LICKESEMRN NRHQHNQNVD AYYHEDRNSL
1200
1201
QLVKEKARKE KELVRKHFKS RMIVHPRFQN ITADQATEYL SDKDFGESIV
1250
1251
RPSSRGLNFL TLTLKIYDGV YAHKEIAEGG KENKDITSLQ CIGKTLTIGE
1300
1301
DTFEDLDEVM DRYVDPLVSH LKTMLNYRKF RKGTKSEVDD LLRIEKGENP
1350
1351
SRIVYCFGIS HEHPGTFILS YIRSTNPHHE YIGLYPKGFK FRKRMFEDID
1400
1401
RLVAYFQRHI DDPLQESAPS IRSIAAKVPM RSPADHGSSG GSGWGSSQSE
1450
1451
GGWKGNSDRS GSGRGGEYRN GGGRDGHPSG APRPYGGRGR GRGRGRRDDM
1500
1501
NSDRQDGNGD WGNNDTGTAD GGWGNSGGGG WGSESAGKKT GGGSTGGWGS
1550
1551
ESGGNKSDGA GSWGSGSGGG GSGGWGNDSG GKKSSEDGGF GSGSGGGGSD
1600
1601
WGNESGGKKS SADGGWGSES GGKKSDGEGG WGNEPSSRKS DGGGGGW   
1647
 

Show the unformatted sequence.

Checksums:
CRC64:0280D05F681709CE
MD5:316caae326f80c74ea19a6c52ba220e9

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;