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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PATL1_RAT (B5DF93)

Summary

This is the summary of UniProt entry PATL1_RAT (B5DF93).

Description: Protein PAT1 homolog 1
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 770 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 4 87
disorder n/a 89 95
disorder n/a 98 127
disorder n/a 137 138
disorder n/a 146 198
disorder n/a 201 204
disorder n/a 211 212
low_complexity n/a 211 228
disorder n/a 214 216
disorder n/a 219 246
disorder n/a 248 289
low_complexity n/a 251 261
low_complexity n/a 260 276
disorder n/a 293 308
low_complexity n/a 310 338
disorder n/a 311 404
low_complexity n/a 356 380
disorder n/a 415 419
disorder n/a 443 464
Pfam PAT1 465 727
disorder n/a 496 514
low_complexity n/a 537 551
low_complexity n/a 633 649
low_complexity n/a 686 694
disorder n/a 702 707

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession B5DF93. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MFRYESLEDC PLDEDEDAFQ GLGEEDEEID QFNDDTFGSG AVDDDWQEAH
50
51
ERLAELEEKL PVAADEQTGN GERDEMDLLG DHEENLAERL SKMVIENELE
100
101
DPAVMRAVQT RPVLQPQPGS LNSSIWDGSE VLRRIRGPLL AQEMPTVSVL
150
151
EYALPQRPPQ GPEDDRDLSE RALPRRSTSP IIGSPPVRAV PIGTPPKQMA
200
201
VPSFNQQILC PKPVHVRPPM PPRYPAPYGE RMSPNQLCSV PNSSLLGHPF
250
251
PPSVPPVLSP LQRAQLLGGA QLQPGRMSPS QFARVPGFVG SPLAAMNPKL
300
301
LQGRVGQMLP PAPGFRAFFS APPPATPPPQ QHPPGPGPHL QNLRPQAPMF
350
351
RPDTTHLHPQ HRRLLHQRQL QSRNQHRNLN GTGDRGGHRV SHQDHLRKDP
400
401
YANLMLQREK DWVSKIQMMQ LQSTDPYLDD FYYQNYFEKL EKSSAAEEMQ
450
451
GDGPKKERTK LITPQVARLE HAYKPVQFEG SLGKLTVSSV NNPRKMIDAV
500
501
VTSRSEDDET KEKQVRDKRR KTLVIIEKTY SLLLDVEDYE RRYLLSLEEE
550
551
RPALTDERKH KIWSMYDNLR GKLPGQERPS DDHFVQIMCI RKGKRMVARI
600
601
LPFLSTEQAA DILMATARNL PFLIKKDAQD EVLPCLLSPF SLLLYHLPSV
650
651
TVTSLLQQLM NLPQSATAPA PSNSHLTAVL QNKFGLSLLL ILLSRGEDLH
700
701
SSDPTVESTQ NNQWTEVMFM ATQELLRIPQ AALAKPISIP TNLVSLFSRY
750
751
VDRQKLNLLE TKLQLVQGMR                                 
770
 

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Checksums:
CRC64:938B9109B061DB5E
MD5:ca7208d34c50014f2ce5e915e4cf679c

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;