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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SYL_STRPJ (B8ZKS5)

Summary

This is the summary of UniProt entry SYL_STRPJ (B8ZKS5).

Description: Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}
Source organism: Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) (NCBI taxonomy ID )
Length: 833 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam tRNA-synt_1g 38 180
Pfam tRNA-synt_1_2 221 401
Pfam tRNA-synt_1 600 650
Pfam Anticodon_1 680 801

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession B8ZKS5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSFYNHKEIE PKWQGYWAEH HTFKTGTDAS KPKFYALDMF PYPSGAGLHV
50
51
GHPEGYTATD ILSRYKRAQG YNVLHPMGWD AFGLPAEQYA MDTGNDPAEF
100
101
TAENIANFKR QINALGFSYD WDREVNTTDP NYYKWTQWIF TKLYEKGLAY
150
151
EAEVPVNWVE ELGTAIANEE VLPDGTSERG GYPVVRKPMR QWMLKITAYA
200
201
ERLLNDLDEL DWSESIKDMQ RNWIGKSTGA NVTFKVKGTD KEFTVFTTRP
250
251
DTLFGATFTV LAPEHELVDA ITSSEQAEAV ADYKHQASLK SDLVRTDLAK
300
301
EKTGVWTGAY AINPVNGKEM PIWIADYVLA SYGTGAVMAV PAHDQRDWEF
350
351
AKQFDLPIVE VLEGGNVEEA AYTEDGLHVN SDFLDGLNKE DAIAKIVACL
400
401
EEKGCGQEKV TYRLRDWLFS RQRYWGEPIP IIHWEDGTST AVPETELPLV
450
451
LPVTKDIRPS GTGESPLANL TDWLEVTRED GVKGRRETNT MPQWAGSSWY
500
501
YLRYIDPHNT EKLADEDLLK QWLPVDIYVG GAEHAVLHLL YARFWHKFLY
550
551
DLGVVPTKEP FQKLFNQGMI LGTSYRDHRG ALVATDKVEK RDGSFFHIET
600
601
GEELEQAPAK MSKSLKNVVN PDDVVEQYGA DTLRVYEMFM GPLDASIAWS
650
651
EEGLEGSRKF LDRVYRLITS KEILAENNGA LDKAYNETVK AVTEQIESLK
700
701
FNTAIAQLMV FVNAANKEDK LYVDYAKGFI QLIAPFAPHL AEELWQTVAE
750
751
TGESISYVAW PTWDESKLVE DEIEIVVQIK GKVRAKLMVA KDLSREELQE
800
801
IALADEKVKA EIDGKEIVKV ISVPNKLVNI VVK                  
833
 

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Checksums:
CRC64:C9F166C999CFC3F3
MD5:45b9af953c8694e2ac5056e72d87100d

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
tRNA-synt_1_2 228 - 401 4K47 A 228 - 401 Jmol OpenAstexViewer
4K48 A 228 - 401 Jmol OpenAstexViewer