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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: C0M005_DANRE (C0M005)

Summary

This is the summary of UniProt entry C0M005_DANRE (C0M005).

Description: Paired box protein 7b {ECO:0000313|EMBL:ACN88553.1}
Source organism: Danio rerio (Zebrafish) (Brachydanio rerio) (NCBI taxonomy ID 7955)
Length: 510 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 29
disorder n/a 31 32
Pfam PAX 34 168
disorder n/a 57 58
disorder n/a 97 125
disorder n/a 153 155
disorder n/a 158 159
low_complexity n/a 172 192
disorder n/a 174 235
Pfam Homeodomain 224 280
disorder n/a 237 238
disorder n/a 243 244
disorder n/a 249 250
disorder n/a 252 258
disorder n/a 289 353
low_complexity n/a 343 357
Pfam Pax7 346 389
disorder n/a 356 357
disorder n/a 366 370
disorder n/a 373 399
disorder n/a 401 415
disorder n/a 419 435
disorder n/a 437 443

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession C0M005. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSSLPGTVPR MMRPAPGQNY PRTGFPLEVS TPLGQGRVNQ LGGVFINGRP
50
51
LPNHIRHKIV EMAHHGIRPC VISRQLRVSH GCVSKILCRY QETGSIRPGA
100
101
IGGSKPRQTQ KQVATPDVEK RIEEYKRENP GMFSWEIRDK LLKDGVCDRS
150
151
TVPSGEASSV SSISRVLRAR FGKKDDEDDC DKKDDTGEKK TKHSIDGILG
200
201
DKGRMDEVSD VESEPDLPLK RKQRRSRTTF TAEQLEELEK AFERTHYPDI
250
251
YTREELAQRT KLTEARVQVW FSNRRARWRK QAGANQLAAF NHLLPGGFPP
300
301
TGMPTLPTYQ LPESSYPTTT LPQDVSGTVH RPQPLPPSTM HQGGLSSDSS
350
351
SAYGLSSNRH SFSSYTDTFM SQSASSNHMN PVSNGLSPQV MSILSNPSAV
400
401
APQPQHEFSI SPLHSSLEAS NPISASCSQR SEPIKTADSL PSSQSYCPPT
450
451
YSTTSYSVDP VTAGYQYSQY GQTAVDYLAK NVSLSTQRRM KLGEHSAVLG
500
501
LLQVETGQAY                                            
510
 

Show the unformatted sequence.

Checksums:
CRC64:4553DE1CC94DF8D8
MD5:3446a114ca2dee03b36e31b624a86a89

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;