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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: D4A1V1_RAT (D4A1V1)

Summary

This is the summary of UniProt entry D4A1V1_RAT (D4A1V1).

Description: Intraflagellar transport 57 homolog (Chlamydomonas) (Predicted) {ECO:0000313|EMBL:EDM11101.1}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
View Pfam proteome data.
Length: 429 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
low_complexity n/a 15 36
disorder n/a 16 26
Pfam IFT57 44 401
low_complexity n/a 46 62
disorder n/a 105 107
low_complexity n/a 168 184
disorder n/a 170 194
low_complexity n/a 189 204
disorder n/a 222 231
disorder n/a 265 267
disorder n/a 272 274
disorder n/a 276 277
coiled_coil n/a 311 331
disorder n/a 318 319
disorder n/a 325 341
coiled_coil n/a 339 366
disorder n/a 343 345
disorder n/a 350 372
low_complexity n/a 350 362
disorder n/a 375 376
disorder n/a 407 408
disorder n/a 411 417

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession D4A1V1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAAAAVIPP SGLDDGVSRA RGEGAGEAVV ERGPGAAYHM FVVMEDLVEK
50
51
LKLLRYEEEL LRKSNLKPPS RHYFALPTNP GEQFYMFCTL AAWLINKTGR
100
101
AFEQPQEYDD PNATISNILS ELRSFGRTAD FPPSKLKSGY GEHVCYVLDC
150
151
LAEEALKYIG FTWKRPSYPV EELEEETVPE DDAELTLSKV DEEFVEEETD
200
201
NEENFIDLNV LKAQTYRLDT NESAKQEDIL ESTTDAAEWS LEVERVLPQL
250
251
KVTIRTDNKD WRIHVDQMHQ HKSGIESALK ETKGFLDKLH NEISRTLEKI
300
301
GSREKYINNQ LEHLVQEYRG AQAQLSEARE RYQQGNGGVT ERTRLLSEVT
350
351
EELEKVKQEM EEKGSSMTDG TPLVKIKQSL TKLKQETVQM DIRIGVVEHT
400
401
LLQSKLKEKC NMTRDMHAAV TPESAIGFY                       
429
 

Show the unformatted sequence.

Checksums:
CRC64:9660EE195F604F8C
MD5:2d3dad1d6a424c475c51e9a01dd6a1bd

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.