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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: F1M3T8_RAT (F1M3T8)

Summary

This is the summary of UniProt entry F1M3T8_RAT (F1M3T8).

Description: Attractin-like 1 {ECO:0000313|Ensembl:ENSRNOP00000023414}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 1126 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam EGF_2 103 134
Pfam Kelch_5 206 246
Pfam Kelch_4 320 372
Pfam Kelch_5 433 468
Pfam Lectin_C 618 727
Pfam PSI 742 792
Pfam PSI 795 865
low_complexity n/a 1011 1027
transmembrane n/a 1083 1107

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F1M3T8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MYVYDGDSIY APLVAVLSGL IVPEVRGNET VPEVVTTSGY ALLHFFSDAA
50
51
YNLTGFNIFY SINSCPNNCS GHGKCTTSVS VASQVYCECD KYWKGEACDI
100
101
PYCKANCGSP DHGYCDLTGE KLCVCNDSWQ GPDCSLNVPS TESYWILPNV
150
151
KPFSPSVGRA SHKAVLHGKF MWVIGGYTFN YSSFQMVLNY NLESSIWNVG
200
201
AVSRGPLQRY GHSLALYQEN IFMYGGRMET SDGNVTDELW VFNVRSQSWS
250
251
TKTPTILGHG QQYAVEGHSA HIMELDSGDV VMIVIFGYSA IYGYTSSIQE
300
301
YHISSNTWLV PETKGAIVQG GYGHTSVYDE MTKSVYVHGG YKALPGNKYG
350
351
LVDDLYKYEV NSRTWTILKE SGFARYLHSA VLISGAVLVF GGNTHNDTSL
400
401
SNGAKCFSAD FLAYDIACDE WKTLPKPNLH RDVNRFGHSA VVINGSMYIF
450
451
GGFSSVLLND ILVYKPPSCK AFRDEELCRN AGPGIKCVWN KNHCESWESG
500
501
NANLLRAKCP PRTAASDDRC YRYADCASCT ANTNGCQWCD DKKCISASSN
550
551
CSTSVRNYTK CHIRNEQICN KLTSCKSCSL NLNCQWDQRQ QECQALPAHL
600
601
CGEGWNHVGD SCLRINSSRE SYDSAKLYCY NLSGNLASLT TSKEVGFVLD
650
651
EIQKNTQQRV SPWVGLRKIN ISYWGWEDMS PFTNTSLQWL PGEPNDSGFC
700
701
AYLERAAVAG LKANPCTSMA DGLVCEKPVV SPNQNARPCK KPCSLRTSCA
750
751
NCTSNGMECM WCSSTKRCVD SNAYIISFPY GQCLEWQTAT CSPQNCSGLR
800
801
TCGQCLEQPG CGWCNDPSNT GRGYCIEGSS RGPMKLAGVH NSEVALDTSL
850
851
CPKEKNYEWS FIQCPACQCN GHSTCINNNV CEQCKNLTTG RQCQDCMPGY
900
901
YGDPTNGGQC TACTCGGHAN VCHLHTGKCF CTTKGIKGDQ CQLCDSENRY
950
951
VGNPLRGTCY YSLLIDYQFT FSLLQEDDRH HTAINFIANP EQSNKNLDIS
1000
1001
INASNNFNLN ITWSVGSTGG TISGEETPIV SKMNIKEYRD SFSYEKFNFR
1050
1051
SNPNITFYVY VSNFSWPIKI QIAFSQHNTI MDLVQFFVTF FSCFLSLLLV
1100
1101
AAVVWKIKQT CWASRRREMP RFQQLM                          
1126
 

Show the unformatted sequence.

Checksums:
CRC64:065EF9E7C5187FE8
MD5:34b17d95a3d1895cce17a4797ad7fbd6

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;