Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: F4I1P7_ARATH (F4I1P7)

Summary

This is the summary of UniProt entry F4I1P7_ARATH (F4I1P7).

Description: DNA ligase {ECO:0000256|RuleBase:RU000617}
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 657 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 19
disorder n/a 26 30
Pfam DNA_ligase_A_N 41 221
low_complexity n/a 44 55
low_complexity n/a 169 187
disorder n/a 231 239
Pfam DNA_ligase_A_M 287 489
Pfam DNA_ligase_A_C 514 625
disorder n/a 626 657

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F4I1P7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSNASAKKKR KLEETVDTPP TRVDDKTLVL ISDSKKPKSD RVTKLKSKIG
50
51
LLKKKPTESG RIVITHILCN MLRTVIATTP DDLLPTVYLA ANEIAPAHEG
100
101
IKLGMGKGSY IIKAISEAFG RTESHVEQQY TQLGDLGLVA NGSRSSQTMI
150
151
FMPKPLTVVK VADTLRLIAK ESGKGSKDKK KDLMKALLVA TTDCEPLYLT
200
201
RLLQDNLRLG FSRQTVLAAL GQAAVYNEEH SKPPPNIKNP LDEAATIVKE
250
251
VFSMLPVYDI IVGALLTSGV WNLPKTCNLT LGVPVRPMLA KATTRVDLIL
300
301
EKFKDTVFTA EYKYDGERAQ IYYMEDGTVE IFSRHAERNT GKYPDVALVL
350
351
SRLKKPTVKS FILDCEVVTF NREKEKILPL QSTRAHKNVN VSDIKVGVCV
400
401
FAFDILYLNG QLLIHENLNI RREKLHDSFE EDLGYFQFAT ALTSNDIGEL
450
451
QEFLKASIDI GCEGLMIKSL YSNATYEPAK RSNNWLKLKK DYMDNIGDSV
500
501
DLVPIATFHG RGKRTGFFGA YLLACYDVDK EEFQSICKIG TEFSDVELQD
550
551
LSSSLCSKVI ATPKQYYQVD NDLNPDVWLE PTEVWEVKAA DLTVSPVYRE
600
601
AIGIVDPDKG ISLRFPRLVR IRKDKNPEEA TTSDQIAEMY QAQKHNQPSN
650
651
QGKVDDD                                               
657
 

Show the unformatted sequence.

Checksums:
CRC64:07B81CF3F4607350
MD5:d20056d344577146e38c8c1b7973a7ff

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;