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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: G5EE80_CAEEL (G5EE80)

Summary

This is the summary of UniProt entry G5EE80_CAEEL (G5EE80).

Description: Signal recognition particle 54 kDa protein {ECO:0000256|ARBA:ARBA00013458, ECO:0000256|RuleBase:RU364034}
Source organism: Caenorhabditis elegans (NCBI taxonomy ID 6239)
Length: 496 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam SRP54_N 6 83
Pfam SRP54 101 296
Pfam SRP_SPB 326 431
disorder n/a 370 375
disorder n/a 379 384
disorder n/a 387 412
disorder n/a 414 415
disorder n/a 441 496
low_complexity n/a 474 490

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession G5EE80. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVLADLGRKI RNAIGKLGQS TVINEGELDL MLKEVCTALI ESDVHIRLVK
50
51
QLKDNVKKAI NFEEIVGGAN KRRYIQKTVF NELLKLVDPG VTPFTPTKGR
100
101
RNVFMFVGLQ GSGKTTTCTK MAYYYQRKGW KTCLICADTF RAGAFDQLKQ
150
151
NATKARIPFY GSYSEIDPVK IAAEGVEKFT QEGFEIIIVD TSGRHKQEAS
200
201
LFEEMLQVSN AVTPDNVVFV MDASIGQACE AQARAFSQTV DVASVIITKL
250
251
DSHAKGGGAL SAVAVTKSPV IFIGTGEHID DFEIFKPKSF VQKLLGMGDI
300
301
AGLVDMVNDI GIQDNKELVG RLKQGQFTLR DMYEQFQNIM KMGPFSQIMG
350
351
MIPGFGSEFM TKGNEQESVN RLKRMMTVMD SMSDKELDHP KASELFTKEP
400
401
NRVARVARGS GSHQQEVRDL LAQYKKFSDV VKKIGSIKGL FNGKNGDINP
450
451
KNMNPAKMAQ LNQQMAKMMD PRVLQQMGGM GGLQNMMQQM ARAGKM    
496
 

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Checksums:
CRC64:82FEC8D99A4C7D31
MD5:17e4fd5588c30d793811add0f7e9374d

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;