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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: I1L748_SOYBN (I1L748)

Summary

This is the summary of UniProt entry I1L748_SOYBN (I1L748).

Description: DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}
Source organism: Glycine max (Soybean) (Glycine hispida) (NCBI taxonomy ID 3847)
Length: 1772 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 12 350
disorder n/a 34 37
disorder n/a 39 40
disorder n/a 44 52
disorder n/a 152 173
disorder n/a 189 209
disorder n/a 254 268
disorder n/a 271 274
disorder n/a 278 281
disorder n/a 283 287
disorder n/a 289 293
disorder n/a 322 327
disorder n/a 332 334
Pfam RNA_pol_Rpb1_2 352 520
disorder n/a 401 402
disorder n/a 404 406
disorder n/a 412 418
Pfam RNA_pol_Rpb1_3 523 687
disorder n/a 615 619
low_complexity n/a 627 641
coiled_coil n/a 694 721
Pfam RNA_pol_Rpb1_4 712 818
disorder n/a 714 720
disorder n/a 722 762
disorder n/a 804 806
disorder n/a 808 811
disorder n/a 813 814
disorder n/a 816 819
Pfam RNA_pol_Rpb1_5 825 1404
Pfam RNA_pol_Rpb1_6 891 1075
coiled_coil n/a 944 964
Pfam RNA_pol_Rpb1_7 1160 1281
disorder n/a 1252 1255
disorder n/a 1257 1258
low_complexity n/a 1490 1505
disorder n/a 1494 1495
low_complexity n/a 1519 1673
disorder n/a 1520 1521
disorder n/a 1524 1591
Pfam RNA_pol_Rpb1_R 1527 1540
Pfam RNA_pol_Rpb1_R 1534 1547
Pfam RNA_pol_Rpb1_R 1541 1554
Pfam RNA_pol_Rpb1_R 1548 1561
Pfam RNA_pol_Rpb1_R 1555 1568
Pfam RNA_pol_Rpb1_R 1569 1582
Pfam RNA_pol_Rpb1_R 1583 1596
disorder n/a 1593 1772
Pfam RNA_pol_Rpb1_R 1611 1624
Pfam RNA_pol_Rpb1_R 1625 1638
Pfam RNA_pol_Rpb1_R 1639 1652
Pfam RNA_pol_Rpb1_R 1653 1666
Pfam RNA_pol_Rpb1_R 1667 1680
low_complexity n/a 1677 1695
low_complexity n/a 1687 1698
Pfam RNA_pol_Rpb1_R 1694 1707
low_complexity n/a 1694 1729
Pfam RNA_pol_Rpb1_R 1708 1721
low_complexity n/a 1743 1762
low_complexity n/a 1756 1769

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession I1L748. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDVRFPFSPA EVAKVATVQF GIISPDEIRQ MSVVQIEHGE TTERGKPKIG
50
51
GLSDPRLGTI DRKLKCDTCT GSMAECPGHF GHLELAKPMF HIGFLKTVLA
100
101
IMRCVCFNCS KILANEDDHK FKLALRIRNP KNRLRKILDA CKNKSKCEGG
150
151
DDIDIHGKDT GEPVKKSRGG CGAQQPKITI EGMKINAEYK AQRKKSDDQE
200
201
QLPEPVERKQ TLSAERVLSV LKRISDEDCQ LLGLNPQYAR PDWMILQVLP
250
251
IPPQPVRPSV MMDTSSRSED DLTHQLAMII RHNENLKRQE KNGSPAHIIS
300
301
EFVQLLQFHV ATYFDNELPG LPRATQRSGR PIKSICSRLK AKEGRIRGNL
350
351
MGKRVDFSAR TVITPDPTIN IDQLGVPWSI ALNLTYPETV TPYNIERLKE
400
401
LVEYGPHPPP GKTGAKYIIR DDGQRLDLRY LKKSSDHHLE LGYKVERHLN
450
451
DGDFVLFNRQ PSLHKMSIMG HRIKIMPYST FRLNLSVTSP YNADFDGDEM
500
501
NMHVPQSLET RAEVLELMMV PKCIVSPQSN KPVMGIVQDT LLGCRKITKR
550
551
DTFITKDVFM NILMWWEDFD GKVPAPTILK PEPLWTGKQV FNLIIPKQIN
600
601
LIRFSSWHSD DERGPITPGD TMVRIEKGEL LTGTLCKKTL GASAGSLIHV
650
651
IWEEVGPDAA RKFLGHTQWL VNYWLLQNAF SMGIGDTIAD ASTMEAINQT
700
701
ISLAKEKVKQ LIRDAQEKKL EAEPGRTMMD SFENRVNQTL NKARDDAGNS
750
751
AGNSLSESNN LKAMVTAGSK GSNINISQMT ACVGQQNVEG KRIPYGFVDR
800
801
TLPHFTKDDH GPESRGFVEN SYLRGLTPQE FFFHAMGGRE GLIDTAVKTS
850
851
ETGYIQRRLV KAMEDIMLKY DGTVRNSLGD VIQFLYGEDG MDAIWIETQK
900
901
LDTLKMKKTE FDRVFRYEFD EENWKPNYML QEPVEDLKTI REFRNVFEAE
950
951
VQKLEADRHQ LAIEIASNGD NSLPLPVNLK RLIWNAQKTF KVDFRRPSDM
1000
1001
HPMEIVEAID KLQERLKVVP GEDALSQEAQ KNATLLFNIL LRSTFASKRV
1050
1051
LEEYRLSRES FEWVVGEIES RFLQSLVVPG EMIGVVAAQS IGEPATQMTL
1100
1101
NTFHFAGVSA KNVTLGVPRL RELINVAKSI KTPSLSVYLK PDAGKTKERA
1150
1151
KTVQCALEYT TLRSVTQATE VWYDPDPMST IIEEDVDFVM SYYEMPDEEV
1200
1201
ALEKISPWLL RVELNREMMI NLEFDDDLSC IFNDDNAEKL ILRIRIMNDD
1250
1251
APKGEVQDES AEDDVFLKKI ETNMLTEMTL RGIPDINKVF IKNAKVQKFD
1300
1301
ENEGFKSNGE WMLDTEGVNL LAVMCHEDVD ATRTTSNHLI EVIEVLGIEA
1350
1351
VRRSLLDELR IVISFDGSYV NYRHLAILCE TMTYRGHLMA ITRHGINRND
1400
1401
TGPMMRCSFE ETVDILLDAA AYAETDSLRG VTENIILGQL APIGTGQCAL
1450
1451
YLNDGMLKNA IELQLPSYTD GLDFGIMSGA TPYHEGTMMS PSYLLSPNLR
1500
1501
LSPSSDAQFS PYVGGMAFSP SSSPGYSPSS PGYSPSSPGY SPTSPGYSPT
1550
1551
SPGYSPTSPT YSPSSPGYSP TSPAYSPTSP SYSPTSPAYS PTSPAYSSTS
1600
1601
PAYSPTSPSY SPTSPAYSPT SPSYSLTSPS YSPTSPSYSP TSPSYSPTSP
1650
1651
AYSPTSPSYS PTSPSYSPTS PSYNPQSAKY SPSLAYSPSS PRLSPTSPNY
1700
1701
SPTSPSYSPT SPSYSPSSPT YSPSSPYNSG VSPDYSPTSP QFSPSAGYSP
1750
1751
SQPGYSPSST SQDTPQTSDK DE                              
1772
 

Show the unformatted sequence.

Checksums:
CRC64:5F013E2C6FEAF36B
MD5:c449b094b5263c98cdef39878ef23a16

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;