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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: I1N8M6_SOYBN (I1N8M6)

Summary

This is the summary of UniProt entry I1N8M6_SOYBN (I1N8M6).

Description: Transcription elongation factor spt6 {ECO:0000256|PIRNR:PIRNR036947}
Source organism: Glycine max (Soybean) (Glycine hispida) (NCBI taxonomy ID 3847)
Length: 1649 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 80
low_complexity n/a 8 24
low_complexity n/a 27 53
Pfam SPT6_acidic 35 125
low_complexity n/a 57 77
coiled_coil n/a 59 84
low_complexity n/a 80 87
disorder n/a 82 87
low_complexity n/a 85 102
disorder n/a 91 105
low_complexity n/a 109 124
disorder n/a 119 146
low_complexity n/a 127 138
disorder n/a 150 242
low_complexity n/a 167 189
low_complexity n/a 208 219
disorder n/a 245 248
disorder n/a 253 256
disorder n/a 265 268
disorder n/a 270 271
disorder n/a 278 280
disorder n/a 282 305
disorder n/a 333 338
disorder n/a 384 392
low_complexity n/a 404 418
disorder n/a 486 491
disorder n/a 535 538
disorder n/a 545 547
disorder n/a 730 733
Pfam YqgF 738 897
disorder n/a 782 785
disorder n/a 789 796
Pfam HHH_7 901 1003
Pfam HHH_9 1016 1104
disorder n/a 1040 1046
low_complexity n/a 1042 1053
disorder n/a 1049 1056
disorder n/a 1114 1120
disorder n/a 1211 1214
Pfam SH2_2 1219 1436
disorder n/a 1227 1228
disorder n/a 1231 1233
disorder n/a 1237 1238
disorder n/a 1277 1279
disorder n/a 1437 1438
disorder n/a 1440 1649
low_complexity n/a 1463 1486
low_complexity n/a 1524 1546
low_complexity n/a 1588 1608
low_complexity n/a 1636 1649

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession I1N8M6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAKGVISDEE DDVELDEEER EPVDGDELEE GRDVDNEEED EEEEGQDEYE
50
51
NDGFIVDDIE DEEEEDEEEE RAESDDERQK KKKRKKKEEY VLDEDDYELL
100
101
EDNNINIHRR KESKKFKRLK KGRRDTEEEP SGLSDEEEFV GSGKVGRTAE
150
151
EKLKRSLFGD DEGAPLEDIA EEEEQGEEEE DADIGEDDEM ADFIVDEEEV
200
201
DENGAPMRQK KLKRKKTRQA PGVSSSALQE AQELFGDPDE LILNRQKNLE
250
251
MSEFRETRLE DEFEPIVLSE KYMTEKDDRI RELDIPERMQ ISDESTGAPP
300
301
LDASSIDEES QWICKQLKDG AISWIPKKIS NSQNNEEDDL PVDKDDIIRF
350
351
LELHHVQKLD IPFIAMYRKE DCLSLLKDLE HPEAGDDNWD KNDKTPTLKW
400
401
HKVLWALQDL DKKWLLLQKR KSALQSYYNK RFEEESRRVY DETRLNLNRQ
450
451
LFESVMRSLK EAGSEKEIDD VDSKFNLHFP PGEAGVDEGQ YKRPKRKSMY
500
501
STFSKAGLWE VASRFGCSPE QLGLCLTEVN LQELEDPKET PEEMASNFTC
550
551
AMYDTPEEVL KCARHMAAVE ISCEPSIRKY VRSHFLDHAV VSTCPTADGN
600
601
TTIDSFHQFA GVKWLREKPL SKFDDLQWLL IQKAEEEKLI QVIIKLPEQY
650
651
LNKLIDQFNE YYISDSVSRS AQLWNDQRKL ILHDAIFRFL LPSMEKEARG
700
701
VLASKAKNWL LMEYGKALWT KVSVGPYQQK ENDLGSDDEA APRVMACCWG
750
751
PGKPLTTFVM LDSSGEVLDV LYTGSLTFRS QNVNDQQRKK NDQERVLKFM
800
801
TDHQPHVVVL GAVNLSCTRL KEDIYEVIFK MVEENPRDVG HEMDGLSIVY
850
851
GDESLPRLYE NSRISSEQLP SQQGIVRRAV ALGRYLQNPL AMVATLCGPR
900
901
KEILSWKLSP LESFLNPDDK FAMVEQVMVD VTNQVGLDIN LAISHEWLFA
950
951
PLQFVSGLGP RKAASLQRSL VRAGAIFTRK DFLTEHKLGK KVFVNAVGFL
1000
1001
RVRRSGLAAS SSQFIDLLDD TRIHPESYIL AQELAKDVYE EDGTGDANDD
1050
1051
DDALEMAIEH VRDRPSYLKN LDVEQYASGK KRQNKIQTFY DIKRELIQGF
1100
1101
QDWRKQYEEP SQDEEFYMIS GETEETLAEG KIVQVTVRRV QAQKAICGLE
1150
1151
SGMTGILLKE DYTDDWRDII ELSDRLHEGD MLTCKIKSIQ KNRYQVFLVC
1200
1201
KDSEMRSNRL QNNRDIDPYY HEDRSCFQSD QDKARKEKEL AKKHFKPRMI
1250
1251
VHPRFQNITA DEAIEFLSDK DPGESIIRPS SRGPSYLTLT LKINDGVYAH
1300
1301
KDIVEGGKEH KDITSLLRIG KTLKIGEDTF EDLDEVMDRY VDPLVAHLKA
1350
1351
MLNYRKFRKG TKAEVDELLK MEKAEYPMRI VYSFGISHEH PGTFILTYIR
1400
1401
STNPHHEYIG LYPKGFRFRK KMFEDIDRLV AYFQRHIDDP QHDSAPSIRS
1450
1451
VSAMVPMRSP ATGGSSGASG GSGWGGGSNS EGGWRGHSYD RGDRSSTPGS
1500
1501
KTGRGEYRNN GNQDEHPSGV PRPYGGGRGR GRGRGSYNNR GDNSNNERQD
1550
1551
SGYGGRWGSN NTKDSDDGLS NFPGAKVQNS PGREAFPGGW GGGGSGGGGA
1600
1601
SNSDNGGWEQ ASGGAGPSDG EQGSSGWGSA TKKAASGNGW GSGNSGGGW 
1649
 

Show the unformatted sequence.

Checksums:
CRC64:798CE871D7135C8C
MD5:7a933646a3a50fc13dbfa955a60ccc36

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;