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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: K7LNL8_SOYBN (K7LNL8)

Summary

This is the summary of UniProt entry K7LNL8_SOYBN (K7LNL8).

Description: DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}
Source organism: Glycine max (Soybean) (Glycine hispida) (NCBI taxonomy ID 3847)
Length: 1827 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 12 350
disorder n/a 34 37
disorder n/a 39 40
disorder n/a 42 52
disorder n/a 124 125
disorder n/a 152 173
disorder n/a 189 209
low_complexity n/a 250 258
disorder n/a 254 268
disorder n/a 271 274
disorder n/a 278 281
disorder n/a 283 287
disorder n/a 289 293
disorder n/a 322 327
disorder n/a 332 334
Pfam RNA_pol_Rpb1_2 352 520
disorder n/a 401 402
disorder n/a 404 406
disorder n/a 412 418
Pfam RNA_pol_Rpb1_3 523 687
low_complexity n/a 627 645
coiled_coil n/a 694 721
Pfam RNA_pol_Rpb1_4 712 818
disorder n/a 713 720
disorder n/a 722 756
disorder n/a 758 759
disorder n/a 809 810
Pfam RNA_pol_Rpb1_5 825 1417
Pfam RNA_pol_Rpb1_6 891 1075
Pfam RNA_pol_Rpb1_7 1160 1294
disorder n/a 1265 1268
disorder n/a 1270 1271
disorder n/a 1492 1493
disorder n/a 1496 1500
disorder n/a 1512 1514
disorder n/a 1529 1531
Pfam RNA_pol_Rpb1_R 1536 1550
low_complexity n/a 1536 1718
disorder n/a 1537 1538
disorder n/a 1540 1827
Pfam RNA_pol_Rpb1_R 1544 1557
Pfam RNA_pol_Rpb1_R 1551 1564
Pfam RNA_pol_Rpb1_R 1558 1571
Pfam RNA_pol_Rpb1_R 1565 1578
Pfam RNA_pol_Rpb1_R 1572 1585
Pfam RNA_pol_Rpb1_R 1579 1592
Pfam RNA_pol_Rpb1_R 1586 1599
Pfam RNA_pol_Rpb1_R 1593 1606
Pfam RNA_pol_Rpb1_R 1600 1613
Pfam RNA_pol_Rpb1_R 1607 1620
Pfam RNA_pol_Rpb1_R 1614 1627
Pfam RNA_pol_Rpb1_R 1621 1634
Pfam RNA_pol_Rpb1_R 1628 1641
Pfam RNA_pol_Rpb1_R 1635 1648
Pfam RNA_pol_Rpb1_R 1642 1655
Pfam RNA_pol_Rpb1_R 1656 1669
Pfam RNA_pol_Rpb1_R 1670 1683
Pfam RNA_pol_Rpb1_R 1684 1697
Pfam RNA_pol_Rpb1_R 1698 1711
Pfam RNA_pol_Rpb1_R 1712 1725
low_complexity n/a 1725 1780
Pfam RNA_pol_Rpb1_R 1745 1758
Pfam RNA_pol_Rpb1_R 1759 1772
low_complexity n/a 1794 1819

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession K7LNL8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDIRFPFSPA EVAKVRMVQF GILSPDEIRQ MSVVQIEHGE TTERGKPKVG
50
51
GLSDPRLGTI DRKLKCETCT ASMAECPGHF GHLELAKPMF HIGFLKTVLT
100
101
IMRCVCFNCS KILADENDHK FKQALRIRNP KNRLKKILDA CKNKSKCEGG
150
151
DEIDIPGQDT DEPVKKSRGG CGAQQPKITI EGMKMIAEYK AQRKKSDDQE
200
201
QLPEPVERKQ TLSAERVLGV LKRISDEDCQ LLGLNPKYAR PDWMILQVLP
250
251
IPPPPVRPSV MMDTSSRSED DLTHQLAMII RHNENLKRQE RNGSPAHIIS
300
301
EFAQLLQFHI ATYFDNELPG LPRATQRSGR PIKSICSRLK AKEGRIRGNL
350
351
MGKRVDFSAR TVITPDPTIN IDQLGVPWSI ALNLTYPETV TPYNIERLKE
400
401
LVEYGPHPPP GKTGAKYIIR DDGQRLDLRY LKKSSDHHLE LGYKVERHLN
450
451
DGDFVLFNRQ PSLHKMSIMG HRIKIMPYST FRLNLSVTSP YNADFDGDEM
500
501
NMHVPQSFET RAEVLELMMV PKCIVSPQSN RPVMGIVQDT LLGCRKITKR
550
551
DTFITKDVFM NILMWWEDFD GKVPAPAILK PEPLWTGKQV FNLIIPKQIN
600
601
LIRYSSWHSE SERGSITPGD TMVRIEKGEL LTGTLCKKTL GTSTGSLIHV
650
651
IWEEVGPDAA RKFLGHTQWL VNYWLLQNAF SIGIGDTIAD ASTMETINQT
700
701
ISAAKEKVKQ LIREAQEKKL EAEPGRTMMD SFENRVNQTL NRARDDAGNS
750
751
AQKSLSESNN LKAMVTAGSK GSFINISQMT ACVGQQNVEG KRIPYGFIDR
800
801
TLPHFTKDDY GPESRGFVEN SYLRGLTPQE FFFHAMGGRE GLIDTAVKTS
850
851
ETGYIQRRLV KAMEDIMVKY DGTVRNSLGD VIQFLYGEDG MDAVWIETQK
900
901
LDSLKMKKTE FDRVFRYEFD DENWKPTYML EEPVEDLKTI REFRNVFEAE
950
951
VQKLEADRYQ LATEIATTGD SSLPLPVNLK RLIWNAQKTF KVDFRRPSDM
1000
1001
HPMEIVEAID KLQERLKVVP GEDLLSQEAQ KNATLLFNIL LRSTFASKRV
1050
1051
LEEYRLSREA FEWVVGEIES RFLQSLVASG EMIGCVAAQS IGEPATQMTL
1100
1101
NTFHYAGVSA KNVTLGVPRL REIINVAKRI KTPSLSVYLR SDVGKTKERA
1150
1151
KSVQCALEYT TLRSVTQATE VWYDPDPMST IIEEDADFVK SYYEMPDEEV
1200
1201
ALEKISPWLL RIELNREMMV DKKLSMADIA EKINLEFDDD LTCIFNDDNA
1250
1251
EKLILRIRIM NDEAPKGEIQ DESAEDDVFL KKIESNMLTE MTLRGIPDIN
1300
1301
KVFIKNTKVQ KFDENQGFKP NEEWMLDTEG VNLLAVMCHE DVDATRTTSN
1350
1351
HLIEVIEVLG IEAVRRALLD ELRVVISFDG SYVNYRHLAI LCDTMTYRGH
1400
1401
LMAITRHGIN RNDTGPMMRC SFEETVDILL DAAVYAETDY LRGVTENIML
1450
1451
GQLAPIGTGE CALYLNDEML KNAIELQLPS YMDGLDFGMT PARSPISGTP
1500
1501
YHEGLMSPSY LLSPNLRLSP TSDAQFSPYV GGMAFSPTSS PGYSPSSPGY
1550
1551
SPSSPGYSPT SPGYSPTSPG YSPTSPGYSP TSPTYSPSSP GYSPTSPAYS
1600
1601
PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPA YSPTSPAYSP
1650
1651
TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPAY SPTSPGYSPT
1700
1701
SPSYSPTSPS YSPTSPSYNP QSAKYSPSLA YSPSSPRLSP SSPYSPTSPN
1750
1751
YSPTSPSYSP TSPSYSPSSP TYSPSSPYNS GVSPDYSPSS PQFSPSTGYS
1800
1801
PSQPGYSPSS TSQYTPQTSD KDDGGTR                         
1827
 

Show the unformatted sequence.

Checksums:
CRC64:30FA9E5D28224BEC
MD5:1c62130e24324a79639761b242551c9d

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;