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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: VEGFD_RAT (O35251)

Summary

This is the summary of UniProt entry VEGFD_RAT (O35251).

Description: Vascular endothelial growth factor D {ECO:0000312|RGD:620695}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 326 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
low_complexity n/a 32 46
Pfam PDGF 116 196
Pfam CXCXC 266 278

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O35251. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MYGEWAAVNI LMMSYVYLVQ GFSIEHRAVK DVSLERSSRS VLERSEQQIR
50
51
AASTLEELLQ VAHSEDWKLW RCRLKLKSLA NVDSRSTSHR STRFAATFYD
100
101
TETLKVIDEE WQRTQCSPRE TCVEVASELG KTTNTFFKPP CVNVFRCGGC
150
151
CNEESVMCMN TSTSYISKQL FEISVPLTSV PELVPVKIAN HTGCKCLPTG
200
201
PRHPYSIIRR SIQIPEEDQC PHSKKLCPVD MLWDNTKCKC VLQDENPLPG
250
251
TEDHSYLQEP ALCGPHMMFD EDRCECVCKA PCPGDLIQHP ENCSCFECKE
300
301
SLESCCQKHK MFHPDTCRSM VFSLSP                          
326
 

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Checksums:
CRC64:1261AFA373596C00
MD5:a095a4cbd75d842c3961148004bfb752

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;