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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PAT1_SCHPO (O42958)

Summary

This is the summary of UniProt entry PAT1_SCHPO (O42958).

Description: DNA topoisomerase 2-associated protein pat1
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (NCBI taxonomy ID 284812)
Length: 754 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam PAT1 1 214
disorder n/a 12 53
disorder n/a 66 79
disorder n/a 84 88
disorder n/a 90 96
disorder n/a 99 123
disorder n/a 125 126
disorder n/a 145 147
disorder n/a 149 154
disorder n/a 156 159
disorder n/a 161 165
disorder n/a 168 197
low_complexity n/a 168 176
Pfam PAT1 193 750
disorder n/a 200 201
disorder n/a 203 206
disorder n/a 220 221
disorder n/a 223 226
disorder n/a 229 243
disorder n/a 246 263
disorder n/a 265 272
coiled_coil n/a 286 306
disorder n/a 293 305
disorder n/a 307 312
disorder n/a 328 331
disorder n/a 361 400
low_complexity n/a 370 384
disorder n/a 425 445
low_complexity n/a 439 451

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O42958. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSFFGFNTTL PKENMFPNEG QLEEDGIDFE ETYDDLGNQL NEAGDELNDE
50
51
TFGVSAGSIG RDFDFSGTTA QASAQLEDEQ YQINQQNIFA KPVKPASSEL
100
101
PQVSRLNGAS QFPSREPAST AINKLSDLQP MASIWENIVP EKPAIIPPEV
150
151
ASLQDRLGAQ PSEKVFSLQE LEEQLLNSMT APKPPSQPAI PIVPSEMAAQ
200
201
VTRENISSLD PAISAASIGN VTFGQPNIPS TTTDFAGLAA PNMVHPSQAI
250
251
PNPVMQPSLV PQMPYPQNGM YNPSVAPPAS LVNLFQQEQL IQNQNLDEKR
300
301
QKLERDHMLM AQCAGLMTRS DKSFIARIQI SQLMSEDPES DDFYYRVYSI
350
351
IRGRKPSEEE ASHFIQTYLG PSNNRRRGRR SENPMQKLQQ QLQRLVSSAK
400
401
ERPKATQLSL EGALGKIAVN TVRTPRQLLN VKRPTEPASS NSSLNNFSGF
450
451
STKKDVLHAI EKVYDLLLDF EQALRKASTL ETTDQEQIDT WKTTLSEKLE
500
501
SIWKALYINE SLEASSKTRP PFISIISHPK GMRLLPRLFP HLSKEQQISI
550
551
LKVVVYNFDS LDIVLRGTFD VNGELPLDVV SEMSSFTQFI IPPLLTIVNE
600
601
LDLETINNLF SQLLNRTNAV YLIQTKIGLS FLTLFISRAE ILKQSGTVNQ
650
651
NEKEEWENTF NVMFNRVKGH FSTVFPPPNA RAYADESYPW EFLAACATAA
700
701
SSEQHFTLVS ETRDRVLDNI ITSKRAPSEI AVVRISNVNL FLNAMGLDAR
750
751
QLSA                                                  
754
 

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Checksums:
CRC64:EB226989F3D8E53A
MD5:a3058caac7c75d61aa9656bd5c77b2eb

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;