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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SPT52_ARATH (O80770)

Summary

This is the summary of UniProt entry SPT52_ARATH (O80770).

Description: Putative transcription elongation factor SPT5 homolog 2
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 989 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 57
low_complexity n/a 4 27
low_complexity n/a 29 43
low_complexity n/a 40 53
low_complexity n/a 45 60
Pfam Spt5_N 62 164
disorder n/a 63 85
low_complexity n/a 66 84
disorder n/a 108 125
disorder n/a 128 129
low_complexity n/a 147 158
Pfam Spt5-NGN 170 252
disorder n/a 383 386
Pfam KOW 467 498
low_complexity n/a 588 597
Pfam KOW 591 621
disorder n/a 651 653
disorder n/a 656 682
low_complexity n/a 668 681
Pfam KOW 686 717
disorder n/a 727 729
disorder n/a 731 875
low_complexity n/a 842 857
disorder n/a 889 890
disorder n/a 898 902
disorder n/a 918 919
disorder n/a 927 931
low_complexity n/a 973 986

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O80770. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSQYSDDDYS HEDDSEMEDE DEEDEYEPRS SRKGRSGKKR GRSNSDSDGR
50
51
RGSKKKSSGS AFIDWEVEVD DDVEDDDDDV DVEDGKQQLK FGDFSLCFIV
100
101
SGEADLPNED SDHRRQYYQR GFHPHEEDVD ELEKRTLERL STKYAKDDYE
150
151
LDDVNDVDQQ ALLPSVRDPK LWLVKCAIGR EREVAVCLMQ KIVDRGSEFK
200
201
IRSAIALDHL QNYVYIEADM EAHVKEAIKG MRNIYANQKI LLVPIKEMTA
250
251
VLSVESKAID LSRDSWVRMK LGIYKGDLAQ VVDVDNVRKR VTVKLIPRID
300
301
LQALANKLEG TENVKKKAFA PPPRFMNIDE ARELHIRVEH RRDPMTGDYF
350
351
ENIGGMLFKD GFLYKKVSTK SIAAQNVTPT FDELERFKRP NENGEIDFVD
400
401
ESTLFANRKK GHFMKGDAVI VIKGDLKNLK GWIEKVDEEN VLIRSEMKDL
450
451
PNPIAVNGRE LCKYFEPGNF VKVVSGIHEG GTGMIVKVDQ HMLIILSDTT
500
501
KEHICVFADH VAKSAEVTKG VTKIGDYELH DLVILSDFSF GVILKLDSEA
550
551
IQILKGVPDS SEVSIVKASE IKYKIWKKIN VQDRYKNVVA VKDVVRVIEG
600
601
PSKGKQGPVV QIYKGVLFIH DRHNLEHTGF ICTRCSSCVL AGGNFKTPAL
650
651
VPPSPRRFQR ADMGYNPGAG GRHQGGRGRR GDDHLVGTYV KIRLGPFKGY
700
701
SGRLVEVKDK LVRVELEAKI VTVERKAISD MTDNVVATPQ YNMGSQTPMH
750
751
PSRTPLHPCM TPMRHSGATP IHDGMRTPMR GRAWNPYMPM SPPRDNWEDG
800
801
NPGSWGTSPY EAATPGSDWG SSTPGRSSYR DAGTPINNAN APSPMTPSST
850
851
SYLPTTPGGQ AMTPGTDLDV MSLDIGGDAE TRFIPGILVN VHKAGEDRNP
900
901
GVIRDVLPDG SCVVALGHRG EGETIRATQN KVSLVCPKKN ERVKILGGKY
950
951
CGSTAKVIGE DGQDGIVKLD ESLDIKILKL TILAKLVHE            
989
 

Show the unformatted sequence.

Checksums:
CRC64:A940B90557C3A11C
MD5:27c6838aabd9348ceb882016bfc81367

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;