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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPC1_SCHPO (O94666)

Summary

This is the summary of UniProt entry RPC1_SCHPO (O94666).

Description: DNA-directed RNA polymerase III subunit rpc1 EC=2.7.7.6
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (NCBI taxonomy ID 284812)
Length: 1405 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 10 350
disorder n/a 38 40
disorder n/a 51 54
disorder n/a 261 263
disorder n/a 326 327
disorder n/a 333 334
Pfam RNA_pol_Rpb1_2 352 519
disorder n/a 395 403
disorder n/a 501 502
Pfam RNA_pol_Rpb1_3 522 697
low_complexity n/a 642 656
Pfam RNA_pol_Rpb1_4 722 828
disorder n/a 809 812
Pfam RNA_pol_Rpb1_5 835 1330
low_complexity n/a 987 1004
disorder n/a 990 993
disorder n/a 996 997
disorder n/a 1000 1002
low_complexity n/a 1155 1166
disorder n/a 1190 1192
disorder n/a 1378 1380
low_complexity n/a 1381 1385
disorder n/a 1385 1391

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O94666. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKDPIDDQIP KRIKHLQFGI NGPEEFVKDG TVEVSRRDLY TMTDRSPAEH
50
51
GALDLHMGTS NKQINCATCG ESMADCMGHF GYVKLALPVF HIGYFKATLT
100
101
ILQNICKDCS SVLLSDQEKR QFLKDLRRPG IDNLRRSQIC KRINDHCKKM
150
151
RRCSKCDAMQ GVVKKAGPLK IIHERFRYVR KSQDDEENFR HSFDEALKTI
200
201
PELKMHLSKA HDDLNPLKVL NLFKQITPVD CELLGMDPEH GRPENLLWRY
250
251
VPAPPVCIRP SVAQEGATTE DDLTVKITEI IWTSSLIRAA LSKGTPISNL
300
301
MEQWEFMQLS IAMYINSEMP GLRPSDMPSK PIRGFCQRLK GKQGRFRGNL
350
351
SGKRVDFSGR TVISPDPNLR IDQVAVPYRI AKILTFPERV TTQNKKHLQD
400
401
CIRNGPDVHP GANYVIDRES GFKRFLRFGN RNRIADDLKI GDIVERHLHD
450
451
NDVVLFNRQP SLHKLSIMAH LVKVRPWRTL RFNECVCGPY NADFDGDEMN
500
501
LHVPQTEEAK TEALELMGIK NNLVSPRNGE PIIAATQDFI TAAYLLSLKD
550
551
TFLDRKSISN ICCYMMDAST HIDLPPPAII KPRCLWTGKQ VFTVLMKPNR
600
601
FSKVLVNLDA KTRSFSRIKS KTPEMCPKDG YLMIRNSEII AGVVDKSVVG
650
651
DGKKDSLFYV ILRDYGALEA AEAITRLSKM CARFLGNRGF SIGIEDVQPG
700
701
KSLSSQKEIL VNKAYATSDD FIMQYAKGIL ECQPGMDQEA TLEAKISSTL
750
751
SKVRDDVGEI CMDELGPANS PLIMATCGSK GSKINVSQMV ACVGQQIISG
800
801
KRVPDGFQDR SLPHFHKNSK HPLAKGFVSN SFYSGLTPTE FLFHAISGRE
850
851
GLVDTAVKTA ETGYMSRRLM KSLEDLSSAY DGTVRSSNSD VVQFVYGDDG
900
901
LDPTYMEGDG QAVEFKRTWI HSVNLNYDRH DSAMLPYEII DYVNRALDDP
950
951
KFLTNCNRDF IETIRTFVIE NIAKYLASVR ERRDLAPMLE EPDMDDLDDM
1000
1001
EGDEFAPVAK RKSVENIIRV TEKQLRSFVD RCWEKYMRAK VEPGTAVGAI
1050
1051
GAQSIGEPGT QMTLKTFHFA GVAAQTTLGV PRIKEIINAA KTISTPIITG
1100
1101
QLINDRDERS ARVVKGRIEK TYLKDVTSYI EEVYGPVTTY LSIQVNFDTI
1150
1151
SKLQLDITLA DIAAAIWNTP KLKIPSQQVT VNNTLQQIHV HTSSDGKSSE
1200
1201
TEVYYRLQTY KRVLPDVVVA GIPTINRSVI NQESGKIELF MEGTGLQAVM
1250
1251
NTEGIVGTKT STNHVMEMKD VLGIEAARYS IISEIGYTMA KHGLTVDPRH
1300
1301
IMLLGDVMTC KGEVLGITRF GVAKMKDSVL ALASFEKTTD HLFNAAARFA
1350
1351
KDSIEGISEC IVLGKLAPIG TNVFQLIRRT EEEEEQKPKE LLFDTPSLHQ
1400
1401
LEITA                                                 
1405
 

Show the unformatted sequence.

Checksums:
CRC64:104B1AC4145A3B7B
MD5:fc9d1b8c849313a72f44d1e57512f3df

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;