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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: VIP_HUMAN (P01282)

Summary

This is the summary of UniProt entry VIP_HUMAN (P01282).

Description: VIP peptides
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 170 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 25
low_complexity n/a 7 22
disorder n/a 72 73
Pfam Hormone_2 81 108
disorder n/a 114 118
Pfam Hormone_2 125 152
disorder n/a 154 170

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P01282. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDTRNKAQLL VLLTLLSVLF SQTSAWPLYR APSALRLGDR IPFEGANEPD
50
51
QVSLKEDIDM LQNALAENDT PYYDVSRNAR HADGVFTSDF SKLLGQLSAK
100
101
KYLESLMGKR VSSNISEDPV PVKRHSDAVF TDNYTRLRKQ MAVKKYLNSI
150
151
LNGKRSSEGE SPDFPEELEK                                 
170
 

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Checksums:
CRC64:93EC0177F89508FD
MD5:b219d33bd29cce864febc564d977ca6c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Hormone_2 125 - 152 2RRH A 1 - 28 Jmol OpenAstexViewer
2RRI A 1 - 28 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.