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7  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBSB_ECOLI (P02925)

Summary

This is the summary of UniProt entry RBSB_ECOLI (P02925).

Description: Ribose import binding protein RbsB {ECO:0000305}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 296 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 25
low_complexity n/a 5 20
Pfam Peripla_BP_4 29 281
disorder n/a 251 253

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P02925. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNMKKLATLV SAVALSATVS ANAMAKDTIA LVVSTLNNPF FVSLKDGAQK
50
51
EADKLGYNLV VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV
100
101
KMANQANIPV ITLDRQATKG EVVSHIASDN VLGGKIAGDY IAKKAGEGAK
150
151
VIELQGIAGT SAARERGEGF QQAVAAHKFN VLASQPADFD RIKGLNVMQN
200
201
LLTAHPDVQA VFAQNDEMAL GALRALQTAG KSDVMVVGFD GTPDGEKAVN
250
251
DGKLAATIAQ LPDQIGAKGV ETADKVLKGE KVQAKYPVDL KLVVKQ    
296
 

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Checksums:
CRC64:E5FA305A64EF3ACE
MD5:c907cf8fadfa1c36047887a02c27fd25

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Peripla_BP_4 29 - 281 1BA2 A 4 - 256 Jmol OpenAstexViewer
B 4 - 256 Jmol OpenAstexViewer
1DBP A 4 - 256 Jmol OpenAstexViewer
1DRJ A 4 - 256 Jmol OpenAstexViewer
1DRK A 4 - 256 Jmol OpenAstexViewer
1URP A 4 - 256 Jmol OpenAstexViewer
B 4 - 256 Jmol OpenAstexViewer
C 4 - 256 Jmol OpenAstexViewer
D 4 - 256 Jmol OpenAstexViewer
2DRI A 4 - 256 Jmol OpenAstexViewer
2GX6 A 4 - 256 Jmol OpenAstexViewer