Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: LIVK_ECOLI (P04816)

Summary

This is the summary of UniProt entry LIVK_ECOLI (P04816).

Description: Leucine-specific-binding protein
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 369 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
sig_p n/a 1 23
Pfam Peripla_BP_6 25 364
disorder n/a 271 272
disorder n/a 284 288
disorder n/a 368 369

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P04816. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKRNAKTIIA GMIALAISHT AMADDIKVAV VGAMSGPIAQ WGDMEFNGAR
50
51
QAIKDINAKG GIKGDKLVGV EYDDACDPKQ AVAVANKIVN DGIKYVIGHL
100
101
CSSSTQPASD IYEDEGILMI SPGATNPELT QRGYQHIMRT AGLDSSQGPT
150
151
AAKYILETVK PQRIAIIHDK QQYGEGLARS VQDGLKAANA NVVFFDGITA
200
201
GEKDFSALIA RLKKENIDFV YYGGYYPEMG QMLRQARSVG LKTQFMGPEG
250
251
VGNASLSNIA GDAAEGMLVT MPKRYDQDPA NQGIVDALKA DKKDPSGPYV
300
301
WITYAAVQSL ATALERTGSD EPLALVKDLK ANGANTVIGP LNWDEKGDLK
350
351
GFDFGVFQWH ADGSSTAAK                                  
369
 

Show the unformatted sequence.

Checksums:
CRC64:42B939A18D8723B2
MD5:282fe335fbf6ed4a93ac54316d4aedd5

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Peripla_BP_6 25 - 364 1USG A 2 - 341 Jmol OpenAstexViewer
1USI A 2 - 341 Jmol OpenAstexViewer
C 2 - 341 Jmol OpenAstexViewer
1USK A 2 - 341 Jmol OpenAstexViewer
B 2 - 341 Jmol OpenAstexViewer
C 2 - 341 Jmol OpenAstexViewer
D 2 - 341 Jmol OpenAstexViewer
2LBP A 2 - 341 Jmol OpenAstexViewer