Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PNP_ECOLI (P05055)

Summary

This is the summary of UniProt entry PNP_ECOLI (P05055).

Description: Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 711 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam RNase_PH 13 144
Pfam RNase_PH_C 147 211
disorder n/a 233 235
low_complexity n/a 237 252
Pfam PNPase 241 320
Pfam RNase_PH 323 456
disorder n/a 391 394
disorder n/a 396 399
Pfam RNase_PH_C 459 529
Pfam KH_1 555 614
low_complexity n/a 579 593
disorder n/a 590 592
low_complexity n/a 607 619
Pfam S1 618 690
disorder n/a 687 711
low_complexity n/a 690 710

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P05055. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLNPIVRKFQ YGQHTVTLET GMMARQATAA VMVSMDDTAV FVTVVGQKKA
50
51
KPGQDFFPLT VNYQERTYAA GRIPGSFFRR EGRPSEGETL IARLIDRPIR
100
101
PLFPEGFVNE VQVIATVVSV NPQVNPDIVA MIGASAALSL SGIPFNGPIG
150
151
AARVGYINDQ YVLNPTQDEL KESKLDLVVA GTEAAVLMVE SEAQLLSEDQ
200
201
MLGAVVFGHE QQQVVIQNIN ELVKEAGKPR WDWQPEPVNE ALNARVAALA
250
251
EARLSDAYRI TDKQERYAQV DVIKSETIAT LLAEDETLDE NELGEILHAI
300
301
EKNVVRSRVL AGEPRIDGRE KDMIRGLDVR TGVLPRTHGS ALFTRGETQA
350
351
LVTATLGTAR DAQVLDELMG ERTDTFLFHY NFPPYSVGET GMVGSPKRRE
400
401
IGHGRLAKRG VLAVMPDMDK FPYTVRVVSE ITESNGSSSM ASVCGASLAL
450
451
MDAGVPIKAA VAGIAMGLVK EGDNYVVLSD ILGDEDHLGD MDFKVAGSRD
500
501
GISALQMDIK IEGITKEIMQ VALNQAKGAR LHILGVMEQA INAPRGDISE
550
551
FAPRIHTIKI NPDKIKDVIG KGGSVIRALT EETGTTIEIE DDGTVKIAAT
600
601
DGEKAKHAIR RIEEITAEIE VGRVYTGKVT RIVDFGAFVA IGGGKEGLVH
650
651
ISQIADKRVE KVTDYLQMGQ EVPVKVLEVD RQGRIRLSIK EATEQSQPAA
700
701
APEAPAAEQG E                                          
711
 

Show the unformatted sequence.

Checksums:
CRC64:785B7D54716FC2DE
MD5:82023d760233f9ac07264b5f659b2e18

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
PNPase 241 - 320 3CDI A 264 - 343 Jmol OpenAstexViewer
3H1C A 241 - 320 Jmol OpenAstexViewer
B 241 - 320 Jmol OpenAstexViewer
C 241 - 320 Jmol OpenAstexViewer
G 241 - 320 Jmol OpenAstexViewer
I 241 - 320 Jmol OpenAstexViewer
K 241 - 320 Jmol OpenAstexViewer
M 241 - 320 Jmol OpenAstexViewer
O 241 - 320 Jmol OpenAstexViewer
R 241 - 320 Jmol OpenAstexViewer
T 241 - 320 Jmol OpenAstexViewer
V 241 - 320 Jmol OpenAstexViewer
X 241 - 320 Jmol OpenAstexViewer
299 - 320 3CDJ A 322 - 343 Jmol OpenAstexViewer
RNase_PH 13 - 144 3CDI A 36 - 167 Jmol OpenAstexViewer
3CDJ A 36 - 167 Jmol OpenAstexViewer
3H1C A 13 - 144 Jmol OpenAstexViewer
B 13 - 144 Jmol OpenAstexViewer
C 13 - 144 Jmol OpenAstexViewer
G 13 - 144 Jmol OpenAstexViewer
I 13 - 144 Jmol OpenAstexViewer
K 13 - 144 Jmol OpenAstexViewer
M 13 - 144 Jmol OpenAstexViewer
O 13 - 144 Jmol OpenAstexViewer
R 13 - 144 Jmol OpenAstexViewer
T 13 - 144 Jmol OpenAstexViewer
V 13 - 144 Jmol OpenAstexViewer
X 13 - 144 Jmol OpenAstexViewer
323 - 456 3CDI A 346 - 479 Jmol OpenAstexViewer
3CDJ A 346 - 479 Jmol OpenAstexViewer
3H1C A 323 - 456 Jmol OpenAstexViewer
B 323 - 456 Jmol OpenAstexViewer
C 323 - 456 Jmol OpenAstexViewer
G 323 - 456 Jmol OpenAstexViewer
I 323 - 456 Jmol OpenAstexViewer
K 323 - 456 Jmol OpenAstexViewer
M 323 - 456 Jmol OpenAstexViewer
O 323 - 456 Jmol OpenAstexViewer
R 323 - 456 Jmol OpenAstexViewer
T 323 - 456 Jmol OpenAstexViewer
V 323 - 456 Jmol OpenAstexViewer
X 323 - 456 Jmol OpenAstexViewer
RNase_PH_C 147 - 211 3CDI A 170 - 234 Jmol OpenAstexViewer
3CDJ A 170 - 234 Jmol OpenAstexViewer
3H1C A 147 - 211 Jmol OpenAstexViewer
B 147 - 211 Jmol OpenAstexViewer
C 147 - 211 Jmol OpenAstexViewer
G 147 - 211 Jmol OpenAstexViewer
I 147 - 211 Jmol OpenAstexViewer
K 147 - 211 Jmol OpenAstexViewer
M 147 - 211 Jmol OpenAstexViewer
O 147 - 211 Jmol OpenAstexViewer
R 147 - 211 Jmol OpenAstexViewer
T 147 - 211 Jmol OpenAstexViewer
V 147 - 211 Jmol OpenAstexViewer
X 147 - 211 Jmol OpenAstexViewer
459 - 529 3CDI A 482 - 552 Jmol OpenAstexViewer
3CDJ A 482 - 552 Jmol OpenAstexViewer
3H1C A 459 - 529 Jmol OpenAstexViewer
B 459 - 529 Jmol OpenAstexViewer
C 459 - 529 Jmol OpenAstexViewer
G 459 - 529 Jmol OpenAstexViewer
I 459 - 529 Jmol OpenAstexViewer
K 459 - 529 Jmol OpenAstexViewer
M 459 - 529 Jmol OpenAstexViewer
O 459 - 529 Jmol OpenAstexViewer
R 459 - 529 Jmol OpenAstexViewer
T 459 - 529 Jmol OpenAstexViewer
V 459 - 529 Jmol OpenAstexViewer
X 459 - 529 Jmol OpenAstexViewer
S1 618 - 690 1SRO A 2 - 74 Jmol OpenAstexViewer