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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: SYFB_ECOLI (P07395)

Summary

This is the summary of UniProt entry SYFB_ECOLI (P07395).

Description: Phenylalanine--tRNA ligase beta subunit EC=6.1.1.20
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 795 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam tRNA_bind 45 146
Pfam B3_4 212 385
disorder n/a 354 356
disorder n/a 358 360
disorder n/a 363 367
Pfam B5 406 471
Pfam tRNA_synthFbeta 474 686
Pfam FDX-ACB 701 794
low_complexity n/a 727 738

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P07395. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKFSELWLRE WVNPAIDSDA LANQITMAGL EVDGVEPVAG SFHGVVVGEV
50
51
VECAQHPNAD KLRVTKVNVG GDRLLDIVCG APNCRQGLRV AVATIGAVLP
100
101
GDFKIKAAKL RGEPSEGMLC SFSELGISDD HSGIIELPAD APIGTDIREY
150
151
LKLDDNTIEI SVTPNRADCL GIIGVARDVA VLNQLPLVQP EIVPVGATID
200
201
DTLPITVEAP EACPRYLGRV VKGINVKAPT PLWMKEKLRR CGIRSIDAVV
250
251
DVTNYVLLEL GQPMHAFDKD RIEGGIVVRM AKEGETLVLL DGTEAKLNAD
300
301
TLVIADHNKA LAMGGIFGGE HSGVNDETQN VLLECAFFSP LSITGRARRH
350
351
GLHTDASHRY ERGVDPALQH KAMERATRLL IDICGGEAGP VIDITNEATL
400
401
PKRATITLRR SKLDRLIGHH IADEQVTDIL RRLGCEVTEG KDEWQAVAPS
450
451
WRFDMEIEED LVEEVARVYG YNNIPDEPVQ ASLIMGTHRE ADLSLKRVKT
500
501
LLNDKGYQEV ITYSFVDPKV QQMIHPGVEA LLLPSPISVE MSAMRLSLWT
550
551
GLLATVVYNQ NRQQNRVRIF ESGLRFVPDT QAPLGIRQDL MLAGVICGNR
600
601
YEEHWNLAKE TVDFYDLKGD LESVLDLTGK LNEVEFRAEA NPALHPGQSA
650
651
AIYLKGERIG FVGVVHPELE RKLDLNGRTL VFELEWNKLA DRVVPQAREI
700
701
SRFPANRRDI AVVVAENVPA ADILSECKKV GVNQVVGVNL FDVYRGKGVA
750
751
EGYKSLAISL ILQDTSRTLE EEEIAATVAK CVEALKERFQ ASLRD     
795
 

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Checksums:
CRC64:3B55EC65D25937E5
MD5:8ce280e365c9c63405943ffe355b2d58

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
B3_4 212 - 385 3PCO B 212 - 385 Jmol OpenAstexViewer
D 212 - 385 Jmol OpenAstexViewer
B5 406 - 471 3PCO B 406 - 471 Jmol OpenAstexViewer
D 406 - 471 Jmol OpenAstexViewer
FDX-ACB 701 - 794 3PCO B 701 - 794 Jmol OpenAstexViewer
D 701 - 794 Jmol OpenAstexViewer
tRNA_bind 45 - 146 3PCO B 45 - 146 Jmol OpenAstexViewer
D 45 - 146 Jmol OpenAstexViewer
tRNA_synthFbeta 474 - 686 3PCO B 474 - 686 Jmol OpenAstexViewer
D 474 - 686 Jmol OpenAstexViewer