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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DCOR_TRYBB (P07805)

Summary

This is the summary of UniProt entry DCOR_TRYBB (P07805).

Description: Ornithine decarboxylase
Source organism: Trypanosoma brucei brucei (NCBI taxonomy ID )
Length: 423 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Orn_DAP_Arg_deC 38 385
Pfam Orn_Arg_deC_N 43 279

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P07805. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDIVVNDDLS CRFLEGFNTR DALCKKISMN TCDEGDPFFV ADLGDIVRKH
50
51
ETWKKCLPRV TPFYAVKCND DWRVLGTLAA LGTGFDCASN TEIQRVRGIG
100
101
VPPEKIIYAN PCKQISHIRY ARDSGVDVMT FDCVDELEKV AKTHPKAKMV
150
151
LRISTDDSLA RCRLSVKFGA KVEDCRFILE QAKKLNIDVT GVSFHVGSGS
200
201
TDASTFAQAI SDSRFVFDMG TELGFNMHIL DIGGGFPGTR DAPLKFEEIA
250
251
GVINNALEKH FPPDLKLTIV AEPGRYYVAS AFTLAVNVIA KKVTPGVQTD
300
301
VGAHAESNAQ SFMYYVNDGV YGSFNCILYD HAVVRPLPQR EPIPNEKLYP
350
351
SSVWGPTCDG LDQIVERYYL PEMQVGEWLL FEDMGAYTVV GTSSFNGFQS
400
401
PTIYYVVSGL PDHVVRELKS QKS                             
423
 

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Checksums:
CRC64:924A5AA6C4CD2C36
MD5:15871f5a6054794402293cbb42949990

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Orn_Arg_deC_N 43 - 279 1F3T A 45 - 281 Jmol OpenAstexViewer
B 45 - 281 Jmol OpenAstexViewer
C 45 - 281 Jmol OpenAstexViewer
D 45 - 281 Jmol OpenAstexViewer
1QU4 A 45 - 281 Jmol OpenAstexViewer
B 45 - 281 Jmol OpenAstexViewer
C 45 - 281 Jmol OpenAstexViewer
D 45 - 281 Jmol OpenAstexViewer
1SZR A 45 - 281 Jmol OpenAstexViewer
B 45 - 281 Jmol OpenAstexViewer
C 45 - 281 Jmol OpenAstexViewer
D 45 - 281 Jmol OpenAstexViewer
2TOD A 45 - 281 Jmol OpenAstexViewer
B 45 - 281 Jmol OpenAstexViewer
C 45 - 281 Jmol OpenAstexViewer
D 45 - 281 Jmol OpenAstexViewer
Orn_DAP_Arg_deC 38 - 385 1F3T A 40 - 387 Jmol OpenAstexViewer
B 40 - 387 Jmol OpenAstexViewer
C 40 - 387 Jmol OpenAstexViewer
D 40 - 387 Jmol OpenAstexViewer
1QU4 A 40 - 387 Jmol OpenAstexViewer
B 40 - 387 Jmol OpenAstexViewer
C 40 - 387 Jmol OpenAstexViewer
D 40 - 387 Jmol OpenAstexViewer
1SZR A 40 - 387 Jmol OpenAstexViewer
B 40 - 387 Jmol OpenAstexViewer
C 40 - 387 Jmol OpenAstexViewer
D 40 - 387 Jmol OpenAstexViewer
2TOD A 40 - 387 Jmol OpenAstexViewer
B 40 - 387 Jmol OpenAstexViewer
C 40 - 387 Jmol OpenAstexViewer
D 40 - 387 Jmol OpenAstexViewer