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11  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: BAMC_ECOLI (P0A903)

Summary

This is the summary of UniProt entry BAMC_ECOLI (P0A903).

Description: Outer membrane protein assembly factor BamC {ECO:0000255|HAMAP-Rule:MF_00924}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 344 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 27
low_complexity n/a 9 28
low_complexity n/a 38 53
Pfam Lipoprotein_18 40 342
disorder n/a 142 145
low_complexity n/a 211 226
disorder n/a 215 232
disorder n/a 263 266
disorder n/a 273 279
disorder n/a 289 292
disorder n/a 302 304
disorder n/a 318 322

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0A903. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAYSVQKSRL AKVAGVSLVL LLAACSSDSR YKRQVSGDEA YLEAAPLAEL
50
51
HAPAGMILPV TSGDYAIPVT NGSGAVGKAL DIRPPAQPLA LVSGARTQFT
100
101
GDTASLLVEN GRGNTLWPQV VSVLQAKNYT ITQRDDAGQT LTTDWVQWNR
150
151
LDEDEQYRGR YQISVKPQGY QQAVTVKLLN LEQAGKPVAD AASMQRYSTE
200
201
MMNVISAGLD KSATDAANAA QNRASTTMDV QSAADDTGLP MLVVRGPFNV
250
251
VWQRLPAALE KVGMKVTDST RSQGNMAVTY KPLSDSDWQE LGASDPGLAS
300
301
GDYKLQVGDL DNRSSLQFID PKGHTLTQSQ NDALVAVFQA AFSK      
344
 

Show the unformatted sequence.

Checksums:
CRC64:49991F277D9D923C
MD5:8d841e0474b30257f6ea30847a91b30a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Lipoprotein_18 101 - 211 2YH6 A 77 - 187 Jmol OpenAstexViewer
C 77 - 187 Jmol OpenAstexViewer
101 - 212 2LAF A 101 - 212 Jmol OpenAstexViewer
2YH6 B 77 - 188 Jmol OpenAstexViewer
D 77 - 188 Jmol OpenAstexViewer
224 - 342 3SNS A 224 - 342 Jmol OpenAstexViewer
226 - 342 2YH5 A 202 - 318 Jmol OpenAstexViewer
229 - 342 2LAE A 229 - 342 Jmol OpenAstexViewer
40 - 189 5LJO C 40 - 189 Jmol OpenAstexViewer
40 - 213 3TGO C 40 - 213 Jmol OpenAstexViewer
5D0Q G 40 - 213 Jmol OpenAstexViewer
40 - 214 5EKQ C 40 - 214 Jmol OpenAstexViewer
40 - 217 3TGO D 40 - 217 Jmol OpenAstexViewer
40 - 342 5D0Q C 40 - 342 Jmol OpenAstexViewer
40 - 85 5D0O C 40 - 85 Jmol OpenAstexViewer
40 - 88 5AYW C 40 - 88 Jmol OpenAstexViewer