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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CDD_ECOLI (P0ABF6)

Summary

This is the summary of UniProt entry CDD_ECOLI (P0ABF6).

Description: Cytidine deaminase {ECO:0000255|HAMAP-Rule:MF_01558}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 294 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam dCMP_cyt_deam_1 48 142
low_complexity n/a 50 63
Pfam dCMP_cyt_deam_2 157 277

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0ABF6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MHPRFQTAFA QLADNLQSAL EPILADKYFP ALLTGEQVSS LKSATGLDED
50
51
ALAFALLPLA AACARTPLSN FNVGAIARGV SGTWYFGANM EFIGATMQQT
100
101
VHAEQSAISH AWLSGEKALA AITVNYTPCG HCRQFMNELN SGLDLRIHLP
150
151
GREAHALRDY LPDAFGPKDL EIKTLLMDEQ DHGYALTGDA LSQAAIAAAN
200
201
RSHMPYSKSP SGVALECKDG RIFSGSYAEN AAFNPTLPPL QGALILLNLK
250
251
GYDYPDIQRA VLAEKADAPL IQWDATSATL KALGCHSIDR VLLA      
294
 

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Checksums:
CRC64:F0B5CD68AB145D7D
MD5:cde21cad6c214513fc4fc18792eb9152

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
dCMP_cyt_deam_1 48 - 142 1AF2 A 48 - 142 Jmol OpenAstexViewer
1ALN A 48 - 142 Jmol OpenAstexViewer
1CTT A 48 - 142 Jmol OpenAstexViewer
1CTU A 48 - 142 Jmol OpenAstexViewer
dCMP_cyt_deam_2 157 - 277 1AF2 A 157 - 277 Jmol OpenAstexViewer
1ALN A 157 - 277 Jmol OpenAstexViewer
1CTT A 157 - 277 Jmol OpenAstexViewer
1CTU A 157 - 277 Jmol OpenAstexViewer