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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CYOA_ECOLI (P0ABJ1)

Summary

This is the summary of UniProt entry CYOA_ECOLI (P0ABJ1).

Description: Cytochrome bo(3) ubiquinol oxidase subunit 2
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 315 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 27
transmembrane n/a 43 67
transmembrane n/a 88 108
Pfam COX2 143 224
Pfam COX_ARM 239 285
disorder n/a 285 315

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0ABJ1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRLRKYNKSL GWLSLFAGTV LLSGCNSALL DPKGQIGLEQ RSLILTAFGL
50
51
MLIVVIPAIL MAVGFAWKYR ASNKDAKYSP NWSHSNKVEA VVWTVPILII
100
101
IFLAVLTWKT THALEPSKPL AHDEKPITIE VVSMDWKWFF IYPEQGIATV
150
151
NEIAFPANTP VYFKVTSNSV MNSFFIPRLG SQIYAMAGMQ TRLHLIANEP
200
201
GTYDGISASY SGPGFSGMKF KAIATPDRAA FDQWVAKAKQ SPNTMSDMAA
250
251
FEKLAAPSEY NQVEYFSNVK PDLFADVINK FMAHGKSMDM TQPEGEHSAH
300
301
EGMEGMDMSH AESAH                                      
315
 

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Checksums:
CRC64:62EC951183B65724
MD5:925c1148bd9b451cefa9b48d96afa4ef

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
COX2 143 - 224 1CYW A 143 - 224 Jmol OpenAstexViewer
1CYX A 143 - 224 Jmol OpenAstexViewer
1FFT B 143 - 224 Jmol OpenAstexViewer
G 143 - 224 Jmol OpenAstexViewer
COX_ARM 239 - 282 1CYX A 239 - 282 Jmol OpenAstexViewer
239 - 283 1CYW A 239 - 283 Jmol OpenAstexViewer
1FFT B 239 - 283 Jmol OpenAstexViewer
G 239 - 283 Jmol OpenAstexViewer