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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DACA_ECOLI (P0AEB2)

Summary

This is the summary of UniProt entry DACA_ECOLI (P0AEB2).

Description: D-alanyl-D-alanine carboxypeptidase DacA EC=3.4.16.4 EC=3.5.2.6
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 403 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 29
Pfam Peptidase_S11 35 273
Pfam PBP5_C 292 383

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0AEB2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNTIFSARIM KRLALTTALC TAFISAAHAD DLNIKTMIPG VPQIDAESYI
50
51
LIDYNSGKVL AEQNADVRRD PASLTKMMTS YVIGQAMKAG KFKETDLVTI
100
101
GNDAWATGNP VFKGSSLMFL KPGMQVPVSQ LIRGINLQSG NDACVAMADF
150
151
AAGSQDAFVG LMNSYVNALG LKNTHFQTVH GLDADGQYSS ARDMALIGQA
200
201
LIRDVPNEYS IYKEKEFTFN GIRQLNRNGL LWDNSLNVDG IKTGHTDKAG
250
251
YNLVASATEG QMRLISAVMG GRTFKGREAE SKKLLTWGFR FFETVNPLKV
300
301
GKEFASEPVW FGDSDRASLG VDKDVYLTIP RGRMKDLKAS YVLNSSELHA
350
351
PLQKNQVVGT INFQLDGKTI EQRPLVVLQE IPEGNFFGKI IDYIKLMFHH
400
401
WFG                                                   
403
 

Show the unformatted sequence.

Checksums:
CRC64:7FAAB8E98452FF22
MD5:67e71e11a5d766dba6838af555ed17d3

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
PBP5_C 292 - 383 1HD8 A 263 - 354 Jmol OpenAstexViewer
1NJ4 A 263 - 354 Jmol OpenAstexViewer
1NZO A 263 - 354 Jmol OpenAstexViewer
1NZU A 263 - 354 Jmol OpenAstexViewer
1SDN A 263 - 354 Jmol OpenAstexViewer
1Z6F A 263 - 354 Jmol OpenAstexViewer
3BEB A 263 - 354 Jmol OpenAstexViewer
3BEC A 263 - 354 Jmol OpenAstexViewer
3MZD A 263 - 354 Jmol OpenAstexViewer
3MZE A 263 - 354 Jmol OpenAstexViewer
3MZF A 263 - 354 Jmol OpenAstexViewer
5J8X A 263 - 354 Jmol OpenAstexViewer
Peptidase_S11 35 - 273 1HD8 A 6 - 244 Jmol OpenAstexViewer
1NJ4 A 6 - 244 Jmol OpenAstexViewer
1NZO A 6 - 244 Jmol OpenAstexViewer
1NZU A 6 - 244 Jmol OpenAstexViewer
1SDN A 6 - 244 Jmol OpenAstexViewer
1Z6F A 6 - 244 Jmol OpenAstexViewer
3BEB A 6 - 244 Jmol OpenAstexViewer
3BEC A 6 - 244 Jmol OpenAstexViewer
3MZD A 6 - 244 Jmol OpenAstexViewer
3MZE A 6 - 244 Jmol OpenAstexViewer
3MZF A 6 - 244 Jmol OpenAstexViewer
5J8X A 6 - 244 Jmol OpenAstexViewer