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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RELB_ECOLI (P0C079)

Summary

This is the summary of UniProt entry RELB_ECOLI (P0C079).

Description: Antitoxin RelB {ECO:0000303|PubMed:9767574}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 79 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam RelB 1 79

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0C079. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGSINLRIDD ELKARSYAAL EKMGVTPSEA LRLMLEYIAD NERLPFKQTL
50
51
LSDEDAELVE IVKERLRNPK PVRVTLDEL                       
79
 

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Checksums:
CRC64:3DD2107337226FAD
MD5:2ee5b9972217c69447d20b9e5c75e32e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RelB 1 - 50 2K29 A 1 - 50 Jmol OpenAstexViewer
B 101 - 150 Jmol OpenAstexViewer
2 - 69 4FXE A 2 - 69 Jmol OpenAstexViewer
2 - 79 4FXE B 2 - 79 Jmol OpenAstexViewer
33 - 79 4FXE C 33 - 79 Jmol OpenAstexViewer
47 - 79 2KC8 B 47 - 79 Jmol OpenAstexViewer