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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PLYA_DICCH (P0C1A2)

Summary

This is the summary of UniProt entry PLYA_DICCH (P0C1A2).

Description: Pectate lyase A EC=4.2.2.2
Source organism: Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia chrysanthemi) (NCBI taxonomy ID )
Length: 393 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Pectate_lyase_4 85 319

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0C1A2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MMNKASGRSF TRSSKYLLAT LIAGMMASGV SAAELVSDKA LESAPTVGWA
50
51
SQNGFTTGGA AATSDNIYIV TNISEFTSAL SAGAEAKIIQ IKGTIDISGG
100
101
TPYTDFADQK ARSQINIPAN TTVIGLGTDA KFINGSLIID GTDGTNNVII
150
151
RNVYIQTPID VEPHYEKGDG WNAEWDAMNI TNGAHHVWID HVTISDGNFT
200
201
DDMYTTKDGE TYVQHDGALD IKRGSDYVTI SNSLIDQHDK TMLIGHNDTN
250
251
SAQDKGKLHV TLFNNVFNRV TERAPRVRYG SIHSFNNVFK GDAKDPVYRY
300
301
QYSFGIGTSG SVLSEGNSFT IANLSASKAC KVVKKFNGSI FSDNGSVLNG
350
351
SAVDLSGCGF SAYTSKIPYI YDVQPMTTEL AQSITDNAGS GKL       
393
 

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Checksums:
CRC64:20025C904FD7B345
MD5:db8a01a0ff65eff92eb6fa2b3bc85f1f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Pectate_lyase_4 85 - 319 1JRG A 53 - 287 Show 3D Structure View in InterPro
B 53 - 287 Show 3D Structure View in InterPro
1JTA A 53 - 287 Show 3D Structure View in InterPro
1OOC A 53 - 287 Show 3D Structure View in InterPro
B 53 - 287 Show 3D Structure View in InterPro
1PE9 A 53 - 287 Show 3D Structure View in InterPro
B 53 - 287 Show 3D Structure View in InterPro
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