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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: VM1AD_CROAT (P15167)

Summary

This is the summary of UniProt entry VM1AD_CROAT (P15167).

Description: Snake venom metalloproteinase atrolysin-D EC=3.4.24.42
Source organism: Crotalus atrox (Western diamondback rattlesnake) (NCBI taxonomy ID )
Length: 414 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Pep_M12B_propep 23 152
Pfam Reprolysin 197 393

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P15167. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MIEVLLVTIC LAVFPYQGSS IILESGNVND YEVVYPRKVT ALPKGAVQPK
50
51
YEDAMQYELK VNGEPVVLHL EKNKELFSKD YSETHYSPDG RKITTNPSVE
100
101
DHCYYRGRIE NDADSTASIS ACNGLKGHFK LQGEMYLIEP LELSDSEAHA
150
151
VFKLENVEKE DEAPKMCGVT QNWESYEPIK KASDLNLNPD QQNLPQRYIE
200
201
LVVVADHRVF MKYNSDLNTI RTRVHEIVNF INGFYRSLNI HVSLTDLEIW
250
251
SNEDQINIQS ASSDTLNAFA EWRETDLLNR KSHDNAQLLT AIELDEETLG
300
301
LAPLGTMCDP KLSIGIVQDH SPINLLMGVT MAHELGHNLG MEHDGKDCLR
350
351
GASLCIMRPG LTKGRSYEFS DDSMHYYERF LKQYKPQCIL NKPLRIDPVS
400
401
TPVSGNELLE AGEE                                       
414
 

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Checksums:
CRC64:0B41F26C9E450031
MD5:342b3e7757c31f0e6c7318ba0fea431a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Reprolysin 197 - 393 1ATL A 6 - 202 Jmol OpenAstexViewer
B 6 - 202 Jmol OpenAstexViewer
1DTH A 6 - 202 Jmol OpenAstexViewer
B 6 - 202 Jmol OpenAstexViewer
1HTD A 6 - 202 Jmol OpenAstexViewer
B 6 - 202 Jmol OpenAstexViewer