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49  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PSB1_HUMAN (P20618)

Summary

This is the summary of UniProt entry PSB1_HUMAN (P20618).

Description: Proteasome subunit beta type-1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 241 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Proteasome 34 226

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P20618. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLSSTAMYSA PGRDLGMEPH RAAGPLQLRF SPYVFNGGTI LAIAGEDFAI
50
51
VASDTRLSEG FSIHTRDSPK CYKLTDKTVI GCSGFHGDCL TLTKIIEARL
100
101
KMYKHSNNKA MTTGAIAAML STILYSRRFF PYYVYNIIGG LDEEGKGAVY
150
151
SFDPVGSYQR DSFKAGGSAS AMLQPLLDNQ VGFKNMQNVE HVPLSLDRAM
200
201
RLVKDVFISA AERDVYTGDA LRICIVTKEG IREETVSLRK D         
241
 

Show the unformatted sequence.

Checksums:
CRC64:AE8FC42799F39157
MD5:c56aaf21799e75e1ba8be8dc1aacab77

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Proteasome 126 - 160 5L5B L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5D L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5E L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5F L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5H L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5I L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5J L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5O L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5P L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5Q L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5R L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5S L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5T L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5U L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5V L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5W L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5X L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5Y L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L5Z L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L60 L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L61 L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L62 L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L63 L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5L64 L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
5M2B L 99 - 133 Jmol OpenAstexViewer
Z 99 - 133 Jmol OpenAstexViewer
34 - 226 4R3O 1 6 - 198 Jmol OpenAstexViewer
M 6 - 198 Jmol OpenAstexViewer
4R67 1 6 - 198 Jmol OpenAstexViewer
a 6 - 198 Jmol OpenAstexViewer
M 6 - 198 Jmol OpenAstexViewer
o 6 - 198 Jmol OpenAstexViewer
5GJQ f 6 - 198 Jmol OpenAstexViewer
t 6 - 198 Jmol OpenAstexViewer
5GJR f 6 - 198 Jmol OpenAstexViewer
t 6 - 198 Jmol OpenAstexViewer
5L4G 1 6 - 198 Jmol OpenAstexViewer
U 6 - 198 Jmol OpenAstexViewer
5LE5 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LEX L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LEY L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LEZ L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF0 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF1 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF3 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF4 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF6 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LF7 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5LN3 6 34 - 226 Jmol OpenAstexViewer
5M32 L 6 - 198 Jmol OpenAstexViewer
Z 6 - 198 Jmol OpenAstexViewer
5T0C AS 6 - 198 Jmol OpenAstexViewer
BS 6 - 198 Jmol OpenAstexViewer
5T0G S 6 - 198 Jmol OpenAstexViewer
5T0H S 6 - 198 Jmol OpenAstexViewer
5T0I S 6 - 198 Jmol OpenAstexViewer
5T0J S 6 - 198 Jmol OpenAstexViewer
6AVO S 6 - 198 Jmol OpenAstexViewer
X 6 - 198 Jmol OpenAstexViewer
36 - 226 5A0Q a 8 - 198 Jmol OpenAstexViewer
M 8 - 198 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.