Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YCBB_ECOLI (P22525)

Summary

This is the summary of UniProt entry YCBB_ECOLI (P22525).

Description: Probable L,D-transpeptidase YcbB EC=2.-.-.-
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 615 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
sig_p n/a 1 30
disorder n/a 36 44
disorder n/a 46 47
disorder n/a 239 243
disorder n/a 245 246
disorder n/a 266 313
Pfam PG_binding_1 304 348
disorder n/a 345 346
Pfam YkuD 374 571
disorder n/a 399 401
disorder n/a 412 413
low_complexity n/a 416 428
disorder n/a 432 434
disorder n/a 493 494

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P22525. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLLNMMCGRQ LSAISLCLAV TFAPLFNAQA DEPEVIPGDS PVAVSEQGEA
50
51
LPQAQATAIM AGIQPLPEGA AEKARTQIES QLPAGYKPVY LNQLQLLYAA
100
101
RDMQPMWENR DAVKAFQQQL AEVAIAGFQP QFNKWVELLT DPGVNGMARD
150
151
VVLSDAMMGY LHFIANIPVK GTRWLYSSKP YALATPPLSV INQWQLALDK
200
201
GQLPTFVAGL APQHPQYAAM HESLLALLCD TKPWPQLTGK ATLRPGQWSN
250
251
DVPALREILQ RTGMLDGGPK ITLPGDDTPT DAVVSPSAVT VETAETKPMD
300
301
KQTTSRSKPA PAVRAAYDNE LVEAVKRFQA WQGLGADGAI GPATRDWLNV
350
351
TPAQRAGVLA LNIQRLRLLP TELSTGIMVN IPAYSLVYYQ NGNQVLDSRV
400
401
IVGRPDRKTP MMSSALNNVV VNPPWNVPPT LARKDILPKV RNDPGYLESH
450
451
GYTVMRGWNS REAIDPWQVD WSTITASNLP FRFQQAPGPR NSLGRYKFNM
500
501
PSSEAIYLHD TPNHNLFKRD TRALSSGCVR VNKASDLANM LLQDAGWNDK
550
551
RISDALKQGD TRYVNIRQSI PVNLYYLTAF VGADGRTQYR TDIYNYDLPA
600
601
RSSSQIVSKA EQLIR                                      
615
 

Show the unformatted sequence.

Checksums:
CRC64:CB16D78CFFD70C57
MD5:0fde8fae184322b4185b396c9a1393ce