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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: COPB_RAT (P23514)

Summary

This is the summary of UniProt entry COPB_RAT (P23514).

Description: Coatomer subunit beta
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
View Pfam proteome data.
Length: 953 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Adaptin_N 18 533
disorder n/a 27 29
low_complexity n/a 352 365
disorder n/a 525 535
disorder n/a 538 539
low_complexity n/a 642 659
disorder n/a 650 651
disorder n/a 653 664
Pfam Coatamer_beta_C 667 807
disorder n/a 676 677
disorder n/a 706 707
Pfam Coatomer_b_Cpla 813 944

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P23514. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL
50
51
NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL
100
101
VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY
150
151
VRRNAVLAIY TIYRNFENLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA
200
201
DQDRALDYLS TCIDQVQTFG DILQLVIVEL IYKVCHANPS ERARFIRCIY
250
251
NLLQSSSPAV KYEAAGTLVT LSSAPTAIKA AAQCYIDLII KESDNNVKLI
300
301
VLDRLVELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS
350
351
RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN
400
401
VIPVLMEFLS DSNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK
450
451
SVKIYRGALW ILGEYCSTKE DIQSVMTEVR RSLGEIPIVE SEIKKEAGEL
500
501
KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEDRP PLRGFLLDGD
550
551
FFVAASLATT LTKIALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL
600
601
PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS QMLSAKLEEE
650
651
KLSQKKESEK RNVTVQPDDP ISFMQLTAKN EMNCKEDQFQ LSLLAAMGNT
700
701
QRKEAADPLA SKLNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS
750
751
DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF
800
801
GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE
850
851
NKVTVNTNVT DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI
900
901
FGEDALANVS IEKPVHQGPD AAVTGHIRIR AKSQGMALSL GDKINLSQKK
950
951
TSL                                                   
953
 

Show the unformatted sequence.

Checksums:
CRC64:FB44C55D13A9B101
MD5:14bdebb3e900668c83661e2d790ea4e1

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.