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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DACB_ECOLI (P24228)

Summary

This is the summary of UniProt entry DACB_ECOLI (P24228).

Description: D-alanyl-D-alanine carboxypeptidase DacB EC=3.4.16.4 EC=3.4.21.-
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 477 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 20
Pfam Peptidase_S13 19 469

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P24228. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRFSRFIIGL TSCIAFSVQA ANVDEYITQL PAGANLALMV QKVGASAPAI
50
51
DYHSQQMALP ASTQKVITAL AALIQLGPDF RFTTTLETKG NVENGVLKGD
100
101
LVARFGADPT LKRQDIRNMV ATLKKSGVNQ IDGNVLIDTS IFASHDKAPG
150
151
WPWNDMTQCF SAPPAAAIVD RNCFSVSLYS APKPGDMAFI RVASYYPVTM
200
201
FSQVRTLPRG SAEAQYCELD VVPGDLNRFT LTGCLPQRSE PLPLAFAVQD
250
251
GASYAGAILK DELKQAGITW SGTLLRQTQV NEPGTVVASK QSAPLHDLLK
300
301
IMLKKSDNMI ADTVFRMIGH ARFNVPGTWR AGSDAVRQIL RQQAGVDIGN
350
351
TIIADGSGLS RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ
400
401
YRAGLHQAGV DGKVSAKTGS LQGVYNLAGF ITTASGQRMA FVQYLSGYAV
450
451
EPADQRNRRI PLVRFESRLY KDIYQNN                         
477
 

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Checksums:
CRC64:4EF5E43D2BEC4E5B
MD5:859c13d4bf76a7de02832a5f905d1f92

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Peptidase_S13 22 - 469 2EX2 A 22 - 469 Jmol OpenAstexViewer
2EX8 A 22 - 469 Jmol OpenAstexViewer
24 - 469 2EXB A 24 - 469 Jmol OpenAstexViewer
26 - 469 2EXA A 26 - 469 Jmol OpenAstexViewer
28 - 469 2EX6 A 28 - 469 Jmol OpenAstexViewer
2EX9 A 28 - 469 Jmol OpenAstexViewer